NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F104031

Metagenome Family F104031

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104031
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 62 residues
Representative Sequence MRKVWTEEEIKLVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Number of Associated Samples 65
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 42.57 %
% of genes near scaffold ends (potentially truncated) 24.75 %
% of genes from short scaffolds (< 2000 bps) 77.23 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (59.406 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(68.317 % of family members)
Environment Ontology (ENVO) Unclassified
(94.059 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.050 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.62%    β-sheet: 0.00%    Coil/Unstructured: 52.38%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF02657SufE 58.42
PF137592OG-FeII_Oxy_5 17.82
PF01612DNA_pol_A_exo1 1.98
PF00476DNA_pol_A 1.98
PF13361UvrD_C 1.98
PF00313CSD 0.99
PF01832Glucosaminidase 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG2166Sulfur transfer protein SufE, Fe-S cluster assemblyPosttranslational modification, protein turnover, chaperones [O] 58.42
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 1.98


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.41 %
All OrganismsrootAll Organisms40.59 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10051187All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101630Open in IMG/M
3300001450|JGI24006J15134_10109088Not Available978Open in IMG/M
3300001450|JGI24006J15134_10128818Not Available861Open in IMG/M
3300001450|JGI24006J15134_10188403Not Available640Open in IMG/M
3300001460|JGI24003J15210_10006298Not Available4999Open in IMG/M
3300001460|JGI24003J15210_10038450Not Available1682Open in IMG/M
3300001460|JGI24003J15210_10060589All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101220Open in IMG/M
3300001460|JGI24003J15210_10061086All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101212Open in IMG/M
3300001460|JGI24003J15210_10106588Not Available791Open in IMG/M
3300001472|JGI24004J15324_10056591Not Available1143Open in IMG/M
3300002242|KVWGV2_10791934Not Available924Open in IMG/M
3300002483|JGI25132J35274_1000937All Organisms → cellular organisms → Bacteria7778Open in IMG/M
3300002483|JGI25132J35274_1060012All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300002483|JGI25132J35274_1074093All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300002488|JGI25128J35275_1027151All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101362Open in IMG/M
3300002488|JGI25128J35275_1089721All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300006029|Ga0075466_1128739Not Available666Open in IMG/M
3300006735|Ga0098038_1017784All Organisms → Viruses → environmental samples → uncultured virus2729Open in IMG/M
3300006735|Ga0098038_1020159All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED102540Open in IMG/M
3300006735|Ga0098038_1022216All Organisms → cellular organisms → Bacteria2408Open in IMG/M
3300006735|Ga0098038_1036310All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101821Open in IMG/M
3300006735|Ga0098038_1199630Not Available647Open in IMG/M
3300006735|Ga0098038_1216213All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.615Open in IMG/M
3300006735|Ga0098038_1218207Not Available611Open in IMG/M
3300006735|Ga0098038_1283284Not Available517Open in IMG/M
3300006738|Ga0098035_1106879Not Available971Open in IMG/M
3300006749|Ga0098042_1005376Not Available4334Open in IMG/M
3300006752|Ga0098048_1023413All Organisms → cellular organisms → Bacteria2055Open in IMG/M
3300006789|Ga0098054_1095172Not Available1117Open in IMG/M
3300006789|Ga0098054_1351551Not Available523Open in IMG/M
3300006793|Ga0098055_1277889All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300006803|Ga0075467_10237783All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED10994Open in IMG/M
3300006916|Ga0070750_10010764All Organisms → cellular organisms → Bacteria4808Open in IMG/M
3300006919|Ga0070746_10001446All Organisms → cellular organisms → Bacteria14190Open in IMG/M
3300006920|Ga0070748_1093568All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101150Open in IMG/M
3300006921|Ga0098060_1014801All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED102490Open in IMG/M
3300006927|Ga0098034_1201183All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300006928|Ga0098041_1015018Not Available2552Open in IMG/M
3300006928|Ga0098041_1028192All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio → Vibrio sp. HI00D651829Open in IMG/M
3300006929|Ga0098036_1123129Not Available795Open in IMG/M
3300006929|Ga0098036_1173796All Organisms → cellular organisms → Bacteria → Proteobacteria656Open in IMG/M
3300007963|Ga0110931_1175225Not Available642Open in IMG/M
3300007963|Ga0110931_1204422Not Available590Open in IMG/M
3300009071|Ga0115566_10393890Not Available799Open in IMG/M
3300009414|Ga0114909_1049805Not Available1242Open in IMG/M
3300009550|Ga0115013_10216535Not Available1153Open in IMG/M
3300010149|Ga0098049_1141005Not Available747Open in IMG/M
3300010149|Ga0098049_1224490Not Available573Open in IMG/M
3300010151|Ga0098061_1044224Not Available1750Open in IMG/M
3300010153|Ga0098059_1065065All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101458Open in IMG/M
3300010153|Ga0098059_1283833Not Available634Open in IMG/M
3300010153|Ga0098059_1411872Not Available510Open in IMG/M
3300011252|Ga0151674_1009989Not Available824Open in IMG/M
3300017705|Ga0181372_1004731All Organisms → cellular organisms → Bacteria2686Open in IMG/M
3300017705|Ga0181372_1025561All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101005Open in IMG/M
3300017717|Ga0181404_1066479All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED10897Open in IMG/M
3300017726|Ga0181381_1130523Not Available524Open in IMG/M
3300017728|Ga0181419_1149270All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED10560Open in IMG/M
3300017729|Ga0181396_1055583Not Available790Open in IMG/M
3300017738|Ga0181428_1166980Not Available514Open in IMG/M
3300017739|Ga0181433_1080014All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED10805Open in IMG/M
3300017753|Ga0181407_1041225All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101223Open in IMG/M
3300017760|Ga0181408_1107977Not Available723Open in IMG/M
3300017765|Ga0181413_1188753Not Available617Open in IMG/M
3300017772|Ga0181430_1230539All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED10524Open in IMG/M
3300017773|Ga0181386_1202950Not Available595Open in IMG/M
3300017781|Ga0181423_1043423Not Available1805Open in IMG/M
3300017951|Ga0181577_10372418Not Available913Open in IMG/M
3300020438|Ga0211576_10286988Not Available858Open in IMG/M
3300020438|Ga0211576_10565087Not Available569Open in IMG/M
3300024344|Ga0209992_10022261All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED103390Open in IMG/M
(restricted) 3300024518|Ga0255048_10544441Not Available561Open in IMG/M
(restricted) 3300024520|Ga0255047_10497847Not Available613Open in IMG/M
3300025066|Ga0208012_1019512All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1107Open in IMG/M
3300025070|Ga0208667_1002459Not Available6046Open in IMG/M
3300025071|Ga0207896_1001210Not Available5030Open in IMG/M
3300025071|Ga0207896_1074295Not Available525Open in IMG/M
3300025071|Ga0207896_1076592Not Available514Open in IMG/M
3300025083|Ga0208791_1036151Not Available912Open in IMG/M
3300025083|Ga0208791_1052940All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.703Open in IMG/M
3300025083|Ga0208791_1083658Not Available514Open in IMG/M
3300025084|Ga0208298_1104936Not Available510Open in IMG/M
3300025084|Ga0208298_1107625Not Available501Open in IMG/M
3300025086|Ga0208157_1007612All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED103742Open in IMG/M
3300025086|Ga0208157_1041118All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101283Open in IMG/M
3300025086|Ga0208157_1111151Not Available647Open in IMG/M
3300025099|Ga0208669_1054429Not Available906Open in IMG/M
3300025102|Ga0208666_1015844All Organisms → cellular organisms → Bacteria2476Open in IMG/M
3300025120|Ga0209535_1000470Not Available28651Open in IMG/M
3300025120|Ga0209535_1006217All Organisms → cellular organisms → Bacteria7211Open in IMG/M
3300025120|Ga0209535_1040014Not Available2105Open in IMG/M
3300025131|Ga0209128_1052361Not Available1486Open in IMG/M
3300025132|Ga0209232_1049306All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED101544Open in IMG/M
3300025132|Ga0209232_1240574Not Available528Open in IMG/M
3300025132|Ga0209232_1248948Not Available514Open in IMG/M
3300025138|Ga0209634_1229399All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED10687Open in IMG/M
3300025508|Ga0208148_1002880Not Available6025Open in IMG/M
3300025543|Ga0208303_1000801Not Available12844Open in IMG/M
3300025652|Ga0208134_1020936All Organisms → cellular organisms → Bacteria2448Open in IMG/M
3300027906|Ga0209404_10955708Not Available586Open in IMG/M
3300032073|Ga0315315_11913095Not Available501Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine68.32%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater11.88%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous7.92%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.98%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.98%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.99%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.99%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.99%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.99%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.99%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.99%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.99%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.99%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300011252Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeateEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017739Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1005118743300000115MarineMRKVWTEEEIKLVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI24006J15134_1010908843300001450MarineMRKVWTEEEIKIAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI24006J15134_1012881823300001450MarineMRKVWASEEIKLVKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTIRKNL*
JGI24006J15134_1018840323300001450MarineMRKVWTEEEIKQVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI24003J15210_1000629873300001460MarineMRKVWTEEEIKLAKELKKKYSASQVGLYFGVTKNSVIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI24003J15210_1003845023300001460MarineMRKVWKEEEVKQVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI24003J15210_1006058933300001460MarineMRKVWASEEIKLVKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI24003J15210_1006108623300001460MarineMRKVWTEEEIKIAKELKRKYXASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI24003J15210_1010658823300001460MarineMRKVWTGEEVKQVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI24004J15324_1005659123300001472MarineMRKVWTEEEIKIAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPNSKYTVRKNL*
KVWGV2_1079193423300002242Marine SedimentMRKVWTEEEIKHAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI25132J35274_100093783300002483MarineMRKVWKEEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
JGI25132J35274_106001213300002483MarineMRKVWTKEEIEDVKKLKQNHSASEVGRMFGVTKNSIXGLLYKEKLKDGYVPAPDSKYTVRKNL*
JGI25132J35274_107409323300002483MarineMRKLWTQEEIQDVKRLKQNHSASEVGRMFGVTKNSIIGLLYKEKLKDGYVPAADSKYTVRKNTL*
JGI25128J35275_102715143300002488MarineMRKLWTKEEIQDVKRLKQNHSASEVGRMFGVTKNSIIGLLYKEKLKDGYVPAADSKYTVRKNTL*
JGI25128J35275_108972123300002488MarineMRKLWTKEEIQDVKRLKQNHSASEVGRMFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL*
Ga0075466_112873923300006029AqueousRLKMRKVWTEEEIKLVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0098038_101778443300006735MarineMRKVWTQEEIKLAKELKKKYSASQVGLYFGVTKNSVIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0098038_102015933300006735MarineMRKVWTEEEIKLVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYIPAPDSKYTVRKNL*
Ga0098038_102221623300006735MarineMRKKWTEEEIKLVKELKKKYSASQVGLYFDVTKNSIIGLLYKEKLKEGYVPAPDSKYTRRKNL*
Ga0098038_103631043300006735MarineMRKVWTEEEIKQAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0098038_119963023300006735MarineMRKVWKKEEIKLVKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPSPDSKYTVRKNL*
Ga0098038_121621333300006735MarineMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYVGRKNL*
Ga0098038_121820723300006735MarineMRKIWTEEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL*
Ga0098038_128328423300006735MarineMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYIGRKNL*
Ga0098035_110687923300006738MarineMRRSWTQRNVEDIKKLNQNHSTSQVGRMFGVTKNSIIGLLYRDKIRNGYVPSPDSKYTVKKNTL*
Ga0098042_100537653300006749MarineMRKVWTEEEIKLAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0098048_102341353300006752MarineMRKVWKKEEIKLVKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0098054_109517213300006789MarineMRKKWTEEEIKQVKELNQKYSASQVGLYFGVTKNSIIGLLYKEKLKNGYVPAPDSKYTVRKNIL*
Ga0098054_135155123300006789MarineMRKLWTEKEIQDVKKLKQNHSASEVGRMFGVTKNSIIGLLYKEKLKDGYVPAADSKYTVRKNTL*
Ga0098055_127788923300006793MarineMRKLWTQEEIQDVKKLKQNHSASEVGRMFGVTKNSIIGLLYKEKLKDGYVPAADSKYTVRKNTL*
Ga0075467_1023778333300006803AqueousMRKVWASEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAP
Ga0070750_1001076463300006916AqueousMRKVWASEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0070746_10001446123300006919AqueousMRKVWASEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL*
Ga0070748_109356833300006920AqueousMRKVWASEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPA
Ga0098060_101480133300006921MarineMRKVWTEEEIKLVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL*
Ga0098034_120118313300006927MarineMRRSWTRRNVEDIKKLNQNHSTSQVGRMFGVTKNSIIGLLYRDKIRNGYVPSPDSKYTVKKNTL*
Ga0098041_101501863300006928MarineMRKVWTKEEIKLAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0098041_102819213300006928MarineMRKIWTKEEIKEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYIGRKNL*
Ga0098036_112312913300006929MarineKKWTEEEIKLVKELKKKYSASQVGLYFDVTKNSIIGLLYKEKLKEGYVPAPDSKYTRRKNL*
Ga0098036_117379623300006929MarineWTQRNVEDIKKLNQNHSTSQVGRMFGVTKNSIIGLLYRDKIRNGYVPSPDSKYTVKKNTL
Ga0110931_117522513300007963MarineRRSWTQRNVEDIKKLNQNHSTSQVGRMFGVTKNSIIGLLYRDKIRNGYVPSPDSKYTVKKNTL*
Ga0110931_120442223300007963MarineMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYTVRKNL*
Ga0115566_1039389013300009071Pelagic MarineMRKVWTEEEIKQVKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL*
Ga0114909_104980543300009414Deep OceanRKMRRSWTQRNVEDIKKLNQNHSTSQVGRMFGVTKNSIIGLLYRDKIRNGYVPSPDSKYTVKKNTL*
Ga0115013_1021653523300009550MarineMRKVWTEEEIKLAKELKRKYSASQVGLYFGVTKNSIIGLLSKEKLKEGYVPAPDSKYTVRKNL*
Ga0098049_114100523300010149MarineMRKVWTQEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL*
Ga0098049_122449013300010149MarineEEIKLAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0098061_104422423300010151MarineMRKKWTEEEIKQVKELNQKYSASQVGLYFGVTKNSIIGLLYKEKLKNGYVPAPDSKYTVRKNTL*
Ga0098059_106506513300010153MarineMRKVWTEEEIKLAKELKRKYSASQVGLYFGVTKNSIIGSLYKEKLKEGYVP
Ga0098059_128383323300010153MarineMRKKWTEEEIKQVKELNQKYSASQVGLYFGVTKNSIIGLLYKEKLKNGYVPAPDSKYTVRKN
Ga0098059_141187223300010153MarineMRKLWTEEEIKQAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAADSKYTVRKNTL*
Ga0151674_100998923300011252MarineMRKVWTQEEIKLAKELKKKDSASQVGLYFGVTKNSVIGLLYKEKLKEGYVPAPDSKYTVRKNL*
Ga0181372_100473153300017705MarineMRKKWTEEEIKQVKELNQKYSASQVGLYFGVTKNSIIGLLYKEKLKNGYVPAPDSKYTVRKNTL
Ga0181372_102556133300017705MarineMRKVWTEEEIKLAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKNGYVPA
Ga0181404_106647913300017717SeawaterMRKVWASEEIKLVKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0181381_113052323300017726SeawaterMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYIGRKNLXYTINAAHQIVAVSVSX
Ga0181419_114927023300017728SeawaterMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYIGRKNLXY
Ga0181396_105558323300017729SeawaterMRKVWASEEIKLVKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKKGYVPAPDSKYTVRKNL
Ga0181428_116698023300017738SeawaterMRKVWTEEEIKQAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYTPAADSKYTVRKNILXFK
Ga0181433_108001443300017739SeawaterMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYIGR
Ga0181407_104122513300017753SeawaterMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYI
Ga0181408_110797743300017760SeawaterMRKVWTEEEIKLAKELKKKYSASQVGLYFGVTKNSVIGLLYKEKLKEGYVPAPDSKYTVR
Ga0181413_118875333300017765SeawaterMRKVWTEEEIKLAKELKKKYSASQVGLYFGVTKNSVIGLLYKEKLKEGYVPA
Ga0181430_123053923300017772SeawaterMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYIGRKNLXYTIN
Ga0181386_120295023300017773SeawaterMRKVWTEEEIKQVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYNVRKNL
Ga0181423_104342333300017781SeawaterMRKMWTEEEIKIAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0181577_1037241843300017951Salt MarshMRKVWKEEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0211576_1028698823300020438MarineMRKVWTEEEIKIAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKKGYVPAPDSKYTVRKNL
Ga0211576_1056508713300020438MarineMRKVWTEEEIKLAKELKKKYSASQVGLYFGVTKNSVIGLLYKEKLKEGYVPAPDSKYTVRKN
Ga0209992_1002226153300024344Deep SubsurfaceMRKVWTEEEIKQAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
(restricted) Ga0255048_1054444113300024518SeawaterMRKKWTKKEIKLAKELNQKYSASQVGLYFGVTKNSIIGLLYKQKLKEGYVPAPDSKYTV
(restricted) Ga0255047_1049784733300024520SeawaterMRKVWTEEEIKIAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPA
Ga0208012_101951233300025066MarineMRRSWTQRNVEDIKKLNQNHSTSQVGRMFGVTKNSIIGLLYRDKIRNGYVPSPDSKYTVKKNTL
Ga0208667_100245963300025070MarineMRKVWTDEEIKLAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0207896_100121073300025071MarineMRKVWTEEEIKIAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0207896_107429523300025071MarineMRKVWTEEEIKQVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0207896_107659223300025071MarineMRKVWASEEIKLVKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTIRKNL
Ga0208791_103615123300025083MarineMRKVWTEEEIKLAKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0208791_105294023300025083MarineMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYVGRKNL
Ga0208791_108365813300025083MarineWTQEEIKLAKELKKKYSASQVGLYFGVTKNSVIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0208298_110493623300025084MarineMRKKWTEEEIKQVKELNQKYSASQVGLYFGVTKNSIIGLLYKEKLKNGYVPAPDSKYTVRKNIL
Ga0208298_110762523300025084MarineMRKKWTEEEIKLVKELKKKYSASQVGLYFDVTKNSIIGLLYKEKLKEGYVPAPDSKYTRRKNL
Ga0208157_100761243300025086MarineMRKIWTKEEIEEVKELKKKHSASQVGILFNVSKNSIIGLLYKEKLKDGYVPSPDSKYIGRKNL
Ga0208157_104111823300025086MarineMRKVWTEEEIKLVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL
Ga0208157_111115113300025086MarineMRKVWKKEEIKLVKELKRKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPSPDSKYTVRKNL
Ga0208669_105442943300025099MarineMRKIWTEEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL
Ga0208666_101584433300025102MarineMRKVWTEEEIKLVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYIPAPDSKYTVRKNL
Ga0209535_1000470333300025120MarineMRKVWTEEEIKLAKELKKKYSASQVGLYFGVTKNSVIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0209535_1006217113300025120MarineMRKVWKEEEVKQVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0209535_104001443300025120MarineMRKVWTGEEVKQVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0209128_105236123300025131MarineMRRSWTRRNVEDIKKLNQNHSTSQVGRMFGVTKNSIIGLLYRDKIRNGYVPSPDSKYTVKKNTL
Ga0209232_104930643300025132MarineMRKLWTQEEIQDVKRLKQNHSASEVGRMFGVTKNSIIGLLYKEKLKDGYVPA
Ga0209232_124057423300025132MarineMRKLWTQEEIQDVKRLKQKHSASEVGRMFGVTKNSIIGLLYKEKLKDGYVPAADSKYTVRKNTL
Ga0209232_124894823300025132MarineMRKVWTEEEIKQAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYTPAADSKYTVRKNIL
Ga0209634_122939923300025138MarineMRKVWASEEIKLVKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTIRKNLX
Ga0208148_100288083300025508AqueousMRKVWASEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0208303_1000801113300025543AqueousMRKVWASEEIKLAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL
Ga0208134_102093643300025652AqueousMRKVWTEEEIKLVKELKQKYSASQVGLYFGVTKNSIIGLLYKEKLKEGYVPAPDSKYTVRKNL
Ga0209404_1095570823300027906MarineMRKLWTQEEIQDVKRLKQNHSASEVGRMFGVTKNSIIGLLYKEKLKDGYVPAPDSKYTVRKNL
Ga0315315_1191309523300032073SeawaterRKRRMRKVWTEEEIKQAKELKKKYSASQVGLYFGVTKNSIIGLLYKEKLKDGYTPAADSKYTVRKNIL


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