NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F104013

Metagenome / Metatranscriptome Family F104013

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104013
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 77 residues
Representative Sequence MGSGLVERDVVPGGIRLTPAPGAAAALIELIDLERECCAWIQFEVGDGSVVTLTAEGDGEAVLAGMFV
Number of Associated Samples 79
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 39.60 %
% of genes near scaffold ends (potentially truncated) 45.54 %
% of genes from short scaffolds (< 2000 bps) 66.34 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.010 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(28.713 % of family members)
Environment Ontology (ENVO) Unclassified
(32.673 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.545 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.04%    β-sheet: 22.92%    Coil/Unstructured: 51.04%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.161.1.1: ADC synthased1i7qa_1i7q0.69414
c.94.1.0: automated matchesd5u4oa_5u4o0.6708
d.144.1.0: automated matchesd6fuca_6fuc0.66706
d.144.1.0: automated matchesd4feva_4fev0.64894
d.74.5.1: PH0987 N-terminal domain-liked2phcb22phc0.63931

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF04264YceI 19.80
PF03988DUF347 4.95
PF08338DUF1731 3.96
PF13197DUF4013 3.96
PF06224HTH_42 2.97
PF03633Glyco_hydro_65C 2.97
PF02558ApbA 1.98
PF01544CorA 1.98
PF08241Methyltransf_11 1.98
PF09339HTH_IclR 1.98
PF04012PspA_IM30 1.98
PF00528BPD_transp_1 1.98
PF06736TMEM175 1.98
PF00702Hydrolase 0.99
PF03466LysR_substrate 0.99
PF07040DUF1326 0.99
PF09948DUF2182 0.99
PF01370Epimerase 0.99
PF03636Glyco_hydro_65N 0.99
PF07690MFS_1 0.99
PF07179SseB 0.99
PF09594GT87 0.99
PF08352oligo_HPY 0.99
PF16859TetR_C_11 0.99
PF02626CT_A_B 0.99
PF01261AP_endonuc_2 0.99
PF13416SBP_bac_8 0.99
PF05988DUF899 0.99
PF09346SMI1_KNR4 0.99
PF00156Pribosyltran 0.99
PF00696AA_kinase 0.99
PF03632Glyco_hydro_65m 0.99
PF08546ApbA_C 0.99
PF12802MarR_2 0.99
PF00196GerE 0.99
PF14435SUKH-4 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 19.80
COG1554Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamilyCarbohydrate transport and metabolism [G] 4.95
COG4705Uncharacterized membrane-anchored proteinFunction unknown [S] 4.95
COG1090NAD dependent epimerase/dehydratase family enzymeGeneral function prediction only [R] 3.96
COG1842Phage shock protein ATranscription [K] 3.96
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 2.97
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 1.98
COG3548Uncharacterized membrane proteinFunction unknown [S] 1.98
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.99
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.99
COG5588Uncharacterized conserved protein, DUF1326 domainFunction unknown [S] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.01 %
UnclassifiedrootN/A0.99 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090004|P1_DRAFT_NODE_189970_len_8525_cov_24_081642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae8575Open in IMG/M
2088090008|P3_DRAFT_NODE_12486_len_7875_cov_20_484571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae7925Open in IMG/M
3300001086|JGI12709J13192_1000062All Organisms → cellular organisms → Bacteria17406Open in IMG/M
3300001537|A2065W1_11580151All Organisms → cellular organisms → Bacteria → Terrabacteria group828Open in IMG/M
3300001593|JGI12635J15846_10001795All Organisms → cellular organisms → Bacteria18662Open in IMG/M
3300001593|JGI12635J15846_10015153All Organisms → cellular organisms → Bacteria6416Open in IMG/M
3300001593|JGI12635J15846_10088288All Organisms → cellular organisms → Bacteria2251Open in IMG/M
3300001593|JGI12635J15846_10378123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium861Open in IMG/M
3300001661|JGI12053J15887_10501025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium580Open in IMG/M
3300002914|JGI25617J43924_10050992All Organisms → cellular organisms → Bacteria1507Open in IMG/M
3300002914|JGI25617J43924_10115637All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300004479|Ga0062595_100207445All Organisms → cellular organisms → Bacteria1221Open in IMG/M
3300005167|Ga0066672_10189688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1306Open in IMG/M
3300005437|Ga0070710_10759978All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005445|Ga0070708_100057029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3476Open in IMG/M
3300005454|Ga0066687_10568344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium673Open in IMG/M
3300005467|Ga0070706_100000756All Organisms → cellular organisms → Bacteria36194Open in IMG/M
3300005468|Ga0070707_100057301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3737Open in IMG/M
3300005559|Ga0066700_10052126All Organisms → cellular organisms → Bacteria2520Open in IMG/M
3300005568|Ga0066703_10181449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1273Open in IMG/M
3300005568|Ga0066703_10412496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium811Open in IMG/M
3300005921|Ga0070766_10288922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1050Open in IMG/M
3300006041|Ga0075023_100274524All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300006047|Ga0075024_100700790All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300006050|Ga0075028_101048645All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300006057|Ga0075026_100583949All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300007258|Ga0099793_10060660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1690Open in IMG/M
3300007982|Ga0102924_1079614All Organisms → cellular organisms → Bacteria1737Open in IMG/M
3300009088|Ga0099830_10224713All Organisms → cellular organisms → Bacteria1477Open in IMG/M
3300009088|Ga0099830_11226106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium623Open in IMG/M
3300009088|Ga0099830_11777689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium515Open in IMG/M
3300009089|Ga0099828_10202420All Organisms → cellular organisms → Bacteria1772Open in IMG/M
3300009089|Ga0099828_11411903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium615Open in IMG/M
3300009089|Ga0099828_11453582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium605Open in IMG/M
3300011269|Ga0137392_10007208All Organisms → cellular organisms → Bacteria → Terrabacteria group7165Open in IMG/M
3300011269|Ga0137392_10698177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium840Open in IMG/M
3300011270|Ga0137391_10105516All Organisms → cellular organisms → Bacteria2442Open in IMG/M
3300011271|Ga0137393_10096631All Organisms → cellular organisms → Bacteria2404Open in IMG/M
3300011271|Ga0137393_11024904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium702Open in IMG/M
3300011271|Ga0137393_11157107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium657Open in IMG/M
3300011992|Ga0120146_1003059All Organisms → cellular organisms → Bacteria4788Open in IMG/M
3300012010|Ga0120118_1012782All Organisms → cellular organisms → Bacteria → Terrabacteria group2380Open in IMG/M
3300012189|Ga0137388_10092294All Organisms → cellular organisms → Bacteria2581Open in IMG/M
3300012189|Ga0137388_10587244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1035Open in IMG/M
3300012189|Ga0137388_10592574All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300012189|Ga0137388_11137138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium718Open in IMG/M
3300012203|Ga0137399_11347015All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300012208|Ga0137376_10079950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2738Open in IMG/M
3300012210|Ga0137378_11178752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium682Open in IMG/M
3300012211|Ga0137377_11695872All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300012363|Ga0137390_10058112All Organisms → cellular organisms → Bacteria3765Open in IMG/M
3300012917|Ga0137395_10004617All Organisms → cellular organisms → Bacteria7000Open in IMG/M
3300012918|Ga0137396_10056651All Organisms → cellular organisms → Bacteria2703Open in IMG/M
3300012922|Ga0137394_10001742All Organisms → cellular organisms → Bacteria15976Open in IMG/M
3300013768|Ga0120155_1015915All Organisms → cellular organisms → Bacteria → Terrabacteria group2558Open in IMG/M
3300014052|Ga0120109_1175574Not Available500Open in IMG/M
3300014058|Ga0120149_1029535All Organisms → cellular organisms → Bacteria → Terrabacteria group1316Open in IMG/M
3300019866|Ga0193756_1000580All Organisms → cellular organisms → Bacteria3071Open in IMG/M
3300019879|Ga0193723_1149715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium626Open in IMG/M
3300020004|Ga0193755_1021989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2109Open in IMG/M
3300020010|Ga0193749_1032555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1013Open in IMG/M
3300020579|Ga0210407_10611835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Salsipaludibacterales → Salsipaludibacteraceae → Salsipaludibacter → Salsipaludibacter albus849Open in IMG/M
3300020581|Ga0210399_10083739All Organisms → cellular organisms → Bacteria2594Open in IMG/M
3300021344|Ga0193719_10158014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium977Open in IMG/M
3300021432|Ga0210384_10705180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium903Open in IMG/M
3300021479|Ga0210410_10169883All Organisms → cellular organisms → Bacteria1948Open in IMG/M
3300021479|Ga0210410_10459177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1139Open in IMG/M
3300021479|Ga0210410_10576421All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300021479|Ga0210410_11120753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium677Open in IMG/M
3300022557|Ga0212123_10646826All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300025625|Ga0208219_1000241All Organisms → cellular organisms → Bacteria20574Open in IMG/M
3300025664|Ga0208849_1190793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium510Open in IMG/M
3300025910|Ga0207684_10000003All Organisms → cellular organisms → Bacteria766933Open in IMG/M
3300026317|Ga0209154_1100479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1233Open in IMG/M
3300026499|Ga0257181_1056693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium658Open in IMG/M
3300026529|Ga0209806_1141092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium936Open in IMG/M
3300026551|Ga0209648_10000086All Organisms → cellular organisms → Bacteria58385Open in IMG/M
3300026551|Ga0209648_10038057All Organisms → cellular organisms → Bacteria4170Open in IMG/M
3300027565|Ga0209219_1010081All Organisms → cellular organisms → Bacteria2172Open in IMG/M
3300027587|Ga0209220_1003759All Organisms → cellular organisms → Bacteria4077Open in IMG/M
3300027629|Ga0209422_1157346All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300027633|Ga0208988_1025763All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300027667|Ga0209009_1099066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium739Open in IMG/M
3300027674|Ga0209118_1000393All Organisms → cellular organisms → Bacteria24666Open in IMG/M
3300027678|Ga0209011_1064439All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300027862|Ga0209701_10017915All Organisms → cellular organisms → Bacteria4623Open in IMG/M
3300027862|Ga0209701_10703200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium521Open in IMG/M
3300027875|Ga0209283_10802238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium579Open in IMG/M
3300027910|Ga0209583_10091695All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300027915|Ga0209069_10415271All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300028536|Ga0137415_10020571All Organisms → cellular organisms → Bacteria6540Open in IMG/M
3300028673|Ga0257175_1028057All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300029636|Ga0222749_10226459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium944Open in IMG/M
3300030923|Ga0138296_1426357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium500Open in IMG/M
3300030950|Ga0074034_10563906All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300031023|Ga0073998_10003175All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300031023|Ga0073998_10057059All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300031023|Ga0073998_11635379All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300031047|Ga0073995_11870271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium629Open in IMG/M
3300032174|Ga0307470_10752113All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300032756|Ga0315742_11182788All Organisms → cellular organisms → Bacteria783Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.84%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil12.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.93%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds5.94%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost5.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.95%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.96%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.98%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090004Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1EnvironmentalOpen in IMG/M
2088090008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3EnvironmentalOpen in IMG/M
3300001086Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3EnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011992Permafrost microbial communities from Nunavut, Canada - A23_65cm_12MEnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030923Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030950Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral N3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031023Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031047Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P1_DRAFT_006677402088090004SoilMGSGLIQRDLVPGGIRLSPAPGAAAALVELVDLERECCAWIHFEVSDGSNVTLTAEGDGEAVLAGMFVEAH
P3_DRAFT_002178502088090008SoilMGSGLIQRDLVPGGIRLSPAPGAAAALVELVDLERECCAWIHFEGSDGSTVTLTAEGDGEATLVGMFVETH
JGI12709J13192_1000062173300001086Forest SoilMGSGLVERDVVPGGIRLTPAPGAAAALIELIDLERECCAWIQFEVGDGSVVTLTAEGDGEAVLAGMFV*
A2065W1_1158015113300001537PermafrostLGSGLVQRDLVPGGIRLSPAPGAAAALIDLIDLERDCCAWIHFEVADGSVVTLTAEGDGEAVLAGMFKGL*
JGI12635J15846_1000179533300001593Forest SoilMSSGLVERDVVPGGIRLRPAPGAAVALIDLIDLERECCAWIRFDVGDGSVVTLTAGGDGEAVLAEMFR*
JGI12635J15846_1001515373300001593Forest SoilMGSGLVQRDPVPGGIRLSAAPGAAAALIELIDLERECCAWIQFEVHGGSVVTLTADGDGEAVLAGMFTLAG*
JGI12635J15846_1008828823300001593Forest SoilMSSGLVERDVVAGGIRLRPAAGAASALIELIDLERECCAWIRFDVGDGSVVTLTADGDGEAVLAEMFR*
JGI12635J15846_1037812313300001593Forest SoilMGSGLVERDLVPGGIRLRAAPGAVIALSELIDLERECCAWINFEVGDGSVVTLTAEGEGEAVLAGM
JGI12053J15887_1050102523300001661Forest SoilDAVPGGIRLTPAVGAADALIQLIDLERECCAWIDFEVGAXSVVTLTAEGDGQAVLAGWFVET*
JGI25617J43924_1005099223300002914Grasslands SoilMADTPPIVCTLSAADLEDREGAWVKLMSSALVVRDVVPGGIRLTPAAGAAAALIDLIDLERECCAWIRFDVGDHSVVTMTADANGEAVLAEMFR*
JGI25617J43924_1011563723300002914Grasslands SoilVKLMSSGLVEREVVLGGIRLTPAAGAASALIDLIDLERECCAWIRFDVSDHSVVTLTADADGEAVLAEMFR*
Ga0062595_10020744533300004479SoilMASRLVRRDVVPGGIRLTAEPGAAGSLLELIELERECCAWIQFEVRDAVVTMTAPGDGEAVLTEMFKAL*
Ga0066672_1018968813300005167SoilLFASGLLHRERVPGGIRLRAEPGAARALGELIELERECCAWIDYQVDGSMVTLTAEGEGEAVLAGMFAPG*
Ga0070710_1075997813300005437Corn, Switchgrass And Miscanthus RhizosphereLGSGLVEREPVPGGIRLRPAPGAATALLDLIDLARECCAWISFEIGEGSAVTLTAGGEGEAVLAGMFSL*
Ga0070708_10005702973300005445Corn, Switchgrass And Miscanthus RhizosphereMGSGLVAREVVPGGIRLSPAPGAAAALIELIDLERECCAWIKFEVGDGSVATLTTEGEGAAVLAGMFESR*
Ga0066687_1056834423300005454SoilLASGLVERERVPGGIRLSAEPGASRALLQLIDLERECCAWIDFEVEDRRVVTLTAMGDGERVLAEMFIPPA*
Ga0070706_100000756193300005467Corn, Switchgrass And Miscanthus RhizosphereMDSGLVAREVVPGGIRLSPAPGAAAALIELIDLERECCAWIKFEVGDGSVATLTTEGEGAAVLAGMFESR*
Ga0070707_10005730123300005468Corn, Switchgrass And Miscanthus RhizosphereMAMAEIPAIACTLSASDLKDRQGAWNKLMDSGLVAREVVPGGIRLSPAPGAAAALIELIDLERECCAWIKFEVGDGSVATLTTEGEGAAVLAGMFESR*
Ga0066700_1005212643300005559SoilVEKLLASGLVERERMPGGIRLSAAPGASRALLQLIDLERALVDYEVEGLVVTLTAAGEGERVLAGMFVS*
Ga0066703_1018144923300005568SoilLGSGLVQRDLVPGGIRLSPAPGAAAALTDLIDLERDCCAWINFEVAEESVVILTAEGDGAAVLAGMFVAS*
Ga0066703_1041249623300005568SoilLLASGLVERERVPGGIRLSAEPGASRALLQLIDLERECCAWIDFEVEDRRVVTLTAMGDGERVLAEMFIPPA*
Ga0070766_1028892223300005921SoilMSSGLVERDVVPGGIRLRPAPGAAIALIDLIDLERECCAWIRFDVSDHSVVTLTAEGDGEAVLAEMFR*
Ga0075023_10027452423300006041WatershedsVPGGIRLRPAPGAAAALIDLIDLERECCSWIRFDVADGSVVTLTAGGDGEAVLAEMFR*
Ga0075024_10070079013300006047WatershedsLEDREGAWRKLMSSGLVERDVVPGGIRLRPAPGAAAALIDLIDLERECCSWIRFDVADGSVVTLTAGGDGEAVLAEMFR*
Ga0075028_10104864513300006050WatershedsLQDRQGAWDKLMGSGLVARDVVPRGIRLSPAPGAAAALIQLIDLERECCAWIQFEVSERSVVTLTAEGAGEAVLAGMFDAR*
Ga0075026_10058394913300006057WatershedsLSASDLQDRQGAWDKLMGSGLVARDVVPRGIRLSPAPGAAAALIQLIDLERECCAWIQFEVSERSVVTLTAEGAGEAVLAGMFEAR*
Ga0099793_1006066033300007258Vadose Zone SoilMPETPPIACTLSAGGIRLSAEPGAAEALIQLIDLERECCAWIDFAVSEGSVATLTADADGEAALAGMFQGH*
Ga0102924_107961423300007982Iron-Sulfur Acid SpringMADTPPIVCTLSASDLKDREGAWRKLMGSGLVRRDVVPGGIRLSATPGAAAALIELIHLERECCAWIQFDVSEGSVVTLTAQGDGEAVLAGMFLEAR*
Ga0099830_1022471323300009088Vadose Zone SoilMAETPPIVCTLTASDLRDRERAWNKLMGSGLVERDVVPGGIRLSPAPGAAAALIELIDLERECCAWIGFEVSADSVVTLTADGDGAAALAGMFEVR*
Ga0099830_1122610613300009088Vadose Zone SoilPSQNLADLPAPTSYDDAHRSQMNLAGNRKLEPGFLTGMAETPLIACTLSASELQDRHGAWKKLMGSGLAERDVVPGGIRLSAAPGAAAALIELIDLERECCAWIQFEVGADSVVTLTADGEGAAVLAGMFEVR*
Ga0099830_1177768913300009088Vadose Zone SoilKLMCSGLVARDVLPGGIRLSTAPGAAAALIELIHLERECCAWIRFEVSADAVGTLTADGDGAAVLAGMFEVR*
Ga0099828_1020242023300009089Vadose Zone SoilMAETSPLICTLTASDLRDREGAWNKLMSTGLVEREVVPGGIRLSPAPGAAAALIGLIDMERECCAWIRFEVSADAVVTLTADGDGAAVLAGMFEVR*
Ga0099828_1141190323300009089Vadose Zone SoilVPGGIRLSPAPGAAAALIELIDLERDCCAWIEFEVSDGSVVTLTAAGEGAIVLAGMFKAP
Ga0099828_1145358213300009089Vadose Zone SoilMEMPSQNLADLPAPTSYDDAHRSQMNLAGNRKLEPGFLTGMAETPLIACTLSASELQDRHGAWKKLMGSGLAERDVVPGGIRLSAAPGAAAALIELIDLERECCAWIQFEVGADSVVTLTADGEGAAVLAGMFEVR*
Ga0137392_1000720883300011269Vadose Zone SoilMGSGLVARDVVPGGIRLSPAPGAAAALIELIDLERECCPWIQFEVGDGSVVTLTAEGEGAAALAGMFEER*
Ga0137392_1069817723300011269Vadose Zone SoilMADTPPIVCTLSAADLEDREGAWVKLMSSGLVERDVVPGGIRLTPAPGAAAALIDLIDLERECCAWIRFDVGDYSVVTLTAGADGEAVLAEMFR*
Ga0137391_1010551643300011270Vadose Zone SoilMAETSPLICTLTASDLRDREGAWNKLMSTGLVEREVVPGGIRLSPAPGAAAALIELIDMERECCAWIRFEVSADAVVTLTADGDGAAVLAGMFEVR*
Ga0137393_1009663113300011271Vadose Zone SoilLVEREVVPGGIRLSPAPGAAAALIELIDMERECCAWIRFEVSADAVVTLTADGDGAAVLAGMFEVR*
Ga0137393_1102490423300011271Vadose Zone SoilMADTPPIVCTLSAADLDDREGAWVKLMSSGLVERDVVPGGIRLTPAPGAAGALIDLIDLERECCAWIRFDVGDYSVVTLTADGDGEAVLAEMFR*
Ga0137393_1115710713300011271Vadose Zone SoilTRQLVPGGIRLSPAPGAAAALIELIDLERECCAWIQFEVGDSSVVTLTAGGDGAAVLAGMFEAP*
Ga0120146_100305983300011992PermafrostMGSGLVRRDVVPGGIRLSPAPGAAAALIDLIDLERDCCAWINFDVSDGAVVTLTADGDGADVLAGMFAPRVKRES*
Ga0120118_101278233300012010PermafrostMASGLVQRHEVPGGIRLSAAPGAAASLLQLIELERECCAWIQFDVRDGAVVTMIAGGEGEAVLTEMFKAL*
Ga0137388_1009229423300012189Vadose Zone SoilMAETSPIVCTLTASDLRDREGAWNKLMSTGLVEREVVPGGIRLSPAPGAAAALIELIDMERECCAWIRFEVSADSVVTLTADGDGAAVLAGMFEVR*
Ga0137388_1058724413300012189Vadose Zone SoilLMGSGLVERDVVPGGIRLSPAPGAAAALIELIDLERECCAWIGFEVSAHSVVTLTADGDGAAALAGMFEVR*
Ga0137388_1059257433300012189Vadose Zone SoilMGSGLVERYTVPGGVRLHAAPGAVDALIDLVDLERECCAWIHFEVLERSVVTMTAEGDGEAVLAGMFLVG*
Ga0137388_1113713823300012189Vadose Zone SoilGSGLVTRQLVPGGIRLSPAPGAAAALIELIDLERECCAWIQFEVGDGSVVTLTAGGDGAAVLAGMFEAP*
Ga0137399_1134701513300012203Vadose Zone SoilLVRREVVPGGIRLSAAPGAAAALIELTDLERECCAWINFDVSNGSVVTLTADGDGGAVLAGMFLEAL*
Ga0137376_1007995013300012208Vadose Zone SoilADLKDRERAWNKLLGSGLVKRDRVPGGIRLSAAPGAAEALIQLIDLERECCAWINFDVSEGSVATLTAEGDGEAVLAGMFASL*
Ga0137378_1117875213300012210Vadose Zone SoilVPGGIRLSAAPGAAEALIQLIDLERECCAWINYDVSEGSVATLTADGDGEAVLVEMFASL
Ga0137377_1169587223300012211Vadose Zone SoilMAETPAIACTLSAADLKDRERAWNKLLGSGLVKRDRVPGGIRLSAAPGAAEALIQLIDLERECCAWINYDVSEGSVATLTADGDGE
Ga0137390_1005811243300012363Vadose Zone SoilMAETSPLICTLTASDLRDREGAWNKLMSTGLVEREVVPGGIRLSPAPGAAAALIELIDMERECCAWIRFEVSADSVVTLTADGDGGAVLAGMFEVR*
Ga0137395_1000461783300012917Vadose Zone SoilMGSGLVRREVVPGGIRLSAATGAAAALIELIDLERECCAWIQFDVSGGSVVTLTADGGEAVLAGMFLEAL*
Ga0137396_1005665133300012918Vadose Zone SoilMAETPPIVCTLSASDLQDRQSAWNKLMGSGLVARDVVPGGIRLSPAPDAAAALLQLIDLERECCAWIQFEVGDGSVVTLTAEGDGAAVLGGMFV*
Ga0137394_1000174223300012922Vadose Zone SoilMLSAFDLEDREGAWKTLIGSGLVKRDRVPGGIRLSAALGAAEALMQLIDLERECCAWIHFEVSDGSVATLTSDGAGEAVLAGMFEGQ*
Ga0120155_101591513300013768PermafrostLVQRDTVPGGIRLSAAPGAAAALLELVELERDCCAWIQFDVRAGAVVTMTAAGDGEAVLTEMFKAL*
Ga0120109_117557413300014052PermafrostTVPGGIRLSAAPGAAAALLELVELERDCCAWIQFDVRAGAVVTMTAAGDGEAVLTEMFKAL*
Ga0120149_102953543300014058PermafrostLMASGLVQRHEVPGGIRLSAAPGAAASLLQLIELERECCAWIQFDVRDGAVVTMIAGGEGEAVLTEMFKAL*
Ga0193756_100058033300019866SoilMAETPAIECTLSASDLKDREGAWRKLFGSGLVKRDRVPGGIRLSAAPGAAVALIELIDLERECCAWINFDLSEGSVATLTAEGGGEAVLAGMFASL
Ga0193723_114971513300019879SoilGSGLVRRDQVPGGIRLSAAPGAAAALIQLVDLERECCAWIHFEVSDGSVVTLTADGAGEAVLAGMFQER
Ga0193755_102198943300020004SoilMGSGLVRRDRVPGGIRLSAAPGAAVALIQLVDLERECCAWIHFEVSDGSVVTLTAHGAGEAVLAGMFQER
Ga0193749_103255523300020010SoilMGTGLVERARVPGGIRLTPAPGAAQALIQLVDLERECCAWIDFEVGAGSVVTLTATGDGEAVLAGMFAEPA
Ga0210407_1061183533300020579SoilQDRQGAWNKLMGSGLVARDVVPGGIRLSPAPGAAAALIDLIDLERECCAWIQFDVSKGSVVTLTAEGEGATVLAGMFEAR
Ga0210399_1008373943300020581SoilMSETPPIVCTLSASDLQDRQGAWNKLMGSGLVARDVVPGGIRLSPAPGAAAALIDLIDLERECCAWIQFDVSKGSVVTLTAEGEGATVLAGMFEAR
Ga0193719_1015801423300021344SoilMRSGLVTREVVPGGIRLSAAPGAAAALIELTDLERDCCAWILFEVSDGSVVTMTADRDGEAVLAGMFNEIS
Ga0210384_1070518033300021432SoilRVPGGIRLTAAPGAAASLIELVDLERECCAWIDFDVQGPVVTLTADGDGEAVLASMFETESGAGG
Ga0210410_1016988323300021479SoilMSSGLVERDVVPGGIRLRPAPGAAIALIDLIDLERECCAWIRFDVSDHSVVTLTAEGDGEAVLAEMFR
Ga0210410_1045917723300021479SoilMSSGLVERDLVPGGIRLRPAPGAALALIELIDLERECCAWIRFDVGDGSTVTLTADGDGEAVLAEMFR
Ga0210410_1057642113300021479SoilGLVARDVVPGGIRLSPAPGAAAALIDLIDLERECCAWIQFDVSKGSVVTLTAEGEGATVLAGMFEAR
Ga0210410_1112075323300021479SoilMSSGLVGRQVVPGGIRLTPAPGAAAALIDLIDLERDCCAWIQFKVGNRSVVTLTAHGDGEAVLAEMFK
Ga0212123_1064682623300022557Iron-Sulfur Acid SpringMADTPPIVCTLSASDLKDREGAWRKLMGSGLVRRDVVPGGIRLSATPGAAAALIELIHLERECCAWIQFDVSEGSVVTLTAQGDGEAVLAGMFLEAR
Ga0208219_1000241213300025625Arctic Peat SoilMKLLGSGLVKRNLVPGGVRLSAAPGAAAALLELIELERECCAWIKFEVRDGAVVTMTAEGDGKAVLTEMFKAL
Ga0208849_119079323300025664Arctic Peat SoilMKLLGSGLVKRNLVPGGVRLSAAPGAAAALLELIELERECCAWIKFEVRDGAVVTMTAEG
Ga0207684_100000033573300025910Corn, Switchgrass And Miscanthus RhizosphereMAMAEIPAIACTLSASDLKDRQGAWNKLMDSGLVAREVVPGGIRLSPAPGAAAALIELIDLERECCAWIKFEVGDGSVATLTTEGEGAAVLAGMFESR
Ga0209154_110047923300026317SoilLFASGLLHRERVPGGIRLRAEPGAARALGELIELERECCAWIDYQVDGSMVTLTAEGEGEAVLAGMFAPG
Ga0257181_105669323300026499SoilTLSAADLEDREAAWKKLMGSGLVERYAVPGGVRLHAAPGAADALIDLVDLERECCAWIHFEVLDRSVVTMTAEGDGEAVLAGMFLVS
Ga0209806_114109213300026529SoilGERERVPGGIRLSAEPGASRALLQLIDLERECCAWIDFEVEDRRVVTLTAMGDGERVLAEMFIPPA
Ga0209648_10000086503300026551Grasslands SoilMADTPPIVCTLSAADLEDREGAWVKLMSSALVVRDVVPGGIRLTPAAGAAAALIDLIDLERECCAWIRFDVGDHSVVTMTADANGEAVLAEMFR
Ga0209648_1003805723300026551Grasslands SoilVKLMSSGLVEREVVLGGIRLTPAAGAASALIDLIDLERECCAWIRFDVSDHSVVTLTADADGEAVLAEMFR
Ga0209219_101008143300027565Forest SoilMSSGLVERDVVPGGIRLRPAPGAAVALIDLIDLERECCAWIRFDVGDGSVVTLTAGGDGEAVLAEMFR
Ga0209220_100375953300027587Forest SoilMGSGLVQRDPVPGGIRLSAAPGAAAALIELIDLERECCAWIHFEVHGGSVVTLTADGDGEAVLAGMFTLAG
Ga0209422_115734623300027629Forest SoilGLVGRKVVPGGIRLTPAPGAAAALIDLIDLERDCCAWIQLKVGNRSVVTLTAHGDGEAVLAEMFK
Ga0208988_102576323300027633Forest SoilMGRGLVERDRVPGGIRLSSAPGAAEALIQLISLERECCAWMDFAVSEGSVATLTADADGEVVLAGMFQAT
Ga0209009_109906623300027667Forest SoilMGSGLVRRDVVPGGIRLSAATGAAAALMELIDLERECCGWIQFDVSGGSVVTLTADAGGEAVLAGMFLEAL
Ga0209118_1000393153300027674Forest SoilMGSGLVQRDPVPGGIRLSAAPGAAAALIELIDLERECCAWIQFEVHGGSVVTLTADGDGEAVLAGMFTLAG
Ga0209011_106443923300027678Forest SoilMASGLVELKRVPRGIRFHAAPGAAAALMDLIDLERECCAWITFEIGDASTVTLTAGGDGETVLVEMFGGAG
Ga0209701_1001791573300027862Vadose Zone SoilMNLAGNRKLEPAFLTGMAETPPIVCTLTASDLRDRERAWNKLMGSGLVERDVVPGGIRLSPAPGAAAALIELIDLERECCAWIGFEVSADSVVTLTADGDGAAALAGMFEVR
Ga0209701_1070320023300027862Vadose Zone SoilMAETSPIVCTLTASDLRDREGAWNKLMSTGLVEREVVPGGIRLSPAPGAAAALIGLIDMERECCAWIRFEVSADAVVTLTAD
Ga0209283_1080223823300027875Vadose Zone SoilSDLRDREGAWNKLMSTGLVEREVVPGGIRLSPAPGAAAALIGLIDMERECCAWIRFEVSADAVVTLTADGDGAAVLAGMFEVR
Ga0209583_1009169523300027910WatershedsMSETPPIVCTLSASDLQDRQGAWDKLMGSGLVARDVVPRGIRLSPAPGAAAALIQLIDLERECCAWIQFEVSERSVVTLTAEGAGEAVLAGMFEAR
Ga0209069_1041527123300027915WatershedsLEDREGAWRKLMSSGLVERDVVPGGIRLRPAPGAAAALIDLIDLERECCSWIRFDVADGSVVTLTAGGDGEAVLAEMFR
Ga0137415_1002057153300028536Vadose Zone SoilMGSGLVKRDRVPGGIRLSAEPGAAEALIQLIDLERECCAWIDFAVSEGSVATLTADADGEAALAGMFQGH
Ga0257175_102805713300028673SoilACTLSASDLQDRQGAWNKLMASGLVARDVVPGGIRLSPAPGAAAALIELIDLERECCAWIQFEVSDGSVVTLTAEGEGAAVLAGMFEGP
Ga0222749_1022645923300029636SoilLSAGDLEGREGAWRKLMSSGLVERDLVPGGIRLRPAPGAALALIELIDLERECCAWIRFDVGDGSVVTLTADGDGEAVLAEMFR
Ga0138296_142635723300030923SoilLEDREGAWKKLMDSGLVERHRVPGGIRLSAAPGAASALIDLIDLERECCAWIHFEVSDGSVVTLTAEGDGEAVLAGMFTLE
Ga0074034_1056390623300030950SoilSGLVERDVVPGGIRLRPAPGAAVALIDLIDLERECCAWIRFDVGDGSVVTLTAGGDGEALLAEMFR
Ga0073998_1000317513300031023SoilVPGGIRLSPTPGAAAALIDLIDLERECCAWIHFDVSDRSVVTLTAGGDGEAVLAEMFR
Ga0073998_1005705933300031023SoilMSSGLVERDVVPRGIRLTPAPGAAAALIDLVDLERECCAWIRFDVSGRSVVTLTAEGGGEAVLAEMFR
Ga0073998_1163537913300031023SoilREGAWRKLMGSGLVRREVVPGGIRLSAATGAAAALMELIDLERECCAWIQFDVSGGSVVTLTADAGGEAVLAGMFLEAL
Ga0073995_1187027113300031047SoilCTLSASDLEDREGAWKKLMGSGLVRREAVPGGIRLSAATGAAAALIELIDLERECCAWIHFEVDRGSVVTMTADGAGEAVLAGMFTEAG
Ga0307470_1075211313300032174Hardwood Forest SoilGLVERYKVPGGIRLKAAPGAAAALIDLIDLERECCAWIHFEVAEGSVVTMTAGGDGEAVLAGMFLVG
Ga0315742_1118278813300032756Forest SoilGAWRKLMSSGLVERDVVPGGIRLRPAPGAAVALIDLIDLERECCAWIRFDVGDGSVVTLTAGGDGEALLAEMFR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.