Metagenome / Metatranscriptome Family F103999

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103999
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	117 residues
Representative Sequence	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSR
Number of Associated Samples	84
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.02 %
% of genes near scaffold ends (potentially truncated)	97.03 %
% of genes from short scaffolds (< 2000 bps)	99.01 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.010 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.871 % of family members)
Environment Ontology (ENVO)	Unclassified (44.554 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.465 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.79% β-sheet: 20.51% Coil/Unstructured: 54.70%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF04542	Sigma70_r2	34.65
PF00082	Peptidase_S8	2.97
PF16177	ACAS_N	0.99
PF00296	Bac_luciferase	0.99
PF13490	zf-HC2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	34.65
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	34.65
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	34.65
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	34.65
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.01 %
Viruses	superkingdom	All Organisms → Viruses	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	73.27 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	73.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	73.27 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	73.27 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	73.27 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	73.27 %
Pseudonocardia spinosispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10270229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	839	Open in IMG/M
3300001867\|JGI12627J18819_10324670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	621	Open in IMG/M
3300002245\|JGIcombinedJ26739_101291354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	621	Open in IMG/M
3300003163\|Ga0006759J45824_1146514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	645	Open in IMG/M
3300003572\|Ga0007424J51698_1063250	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300004631\|Ga0058899_12179840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1080	Open in IMG/M
3300005329\|Ga0070683_102422059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	503	Open in IMG/M
3300005332\|Ga0066388_103090200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	850	Open in IMG/M
3300005436\|Ga0070713_100386387	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300005455\|Ga0070663_101991506	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005458\|Ga0070681_10366666	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300005539\|Ga0068853_100715861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	955	Open in IMG/M
3300005563\|Ga0068855_100277709	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300005578\|Ga0068854_100159926	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300005614\|Ga0068856_102596637	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005719\|Ga0068861_101095076	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005844\|Ga0068862_101982739	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300009093\|Ga0105240_11077514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	856	Open in IMG/M
3300009143\|Ga0099792_10931228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	577	Open in IMG/M
3300009174\|Ga0105241_12272918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	539	Open in IMG/M
3300009545\|Ga0105237_10739616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	990	Open in IMG/M
3300009551\|Ga0105238_10881658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	913	Open in IMG/M
3300010043\|Ga0126380_12159004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300010101\|Ga0127481_1057833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300010362\|Ga0126377_12156012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	633	Open in IMG/M
3300010366\|Ga0126379_11754721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	725	Open in IMG/M
3300010396\|Ga0134126_12073151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	621	Open in IMG/M
3300010866\|Ga0126344_1152076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1264	Open in IMG/M
3300010866\|Ga0126344_1236264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	771	Open in IMG/M
3300010876\|Ga0126361_10530104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	702	Open in IMG/M
3300011119\|Ga0105246_10344480	All Organisms → Viruses → Predicted Viral	1219	Open in IMG/M
3300011120\|Ga0150983_10616904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	965	Open in IMG/M
3300012469\|Ga0150984_105000748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	573	Open in IMG/M
3300012469\|Ga0150984_106925286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	866	Open in IMG/M
3300012469\|Ga0150984_122571389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300012909\|Ga0157290_10079705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	921	Open in IMG/M
3300012924\|Ga0137413_10370502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1022	Open in IMG/M
3300012925\|Ga0137419_11026883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	684	Open in IMG/M
3300012925\|Ga0137419_11949307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	505	Open in IMG/M
3300012930\|Ga0137407_10549725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1081	Open in IMG/M
3300013296\|Ga0157374_10604761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1106	Open in IMG/M
3300013296\|Ga0157374_12603498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	533	Open in IMG/M
3300013297\|Ga0157378_11589004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	700	Open in IMG/M
3300013307\|Ga0157372_10335721	All Organisms → cellular organisms → Bacteria → Proteobacteria	1760	Open in IMG/M
3300014969\|Ga0157376_12589857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	547	Open in IMG/M
3300015054\|Ga0137420_1289090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	649	Open in IMG/M
3300015241\|Ga0137418_10283654	All Organisms → cellular organisms → Bacteria → Proteobacteria	1391	Open in IMG/M
3300015241\|Ga0137418_10659693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	810	Open in IMG/M
3300020076\|Ga0206355_1338985	All Organisms → cellular organisms → Bacteria → Proteobacteria	1123	Open in IMG/M
3300021086\|Ga0179596_10566006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	577	Open in IMG/M
3300021086\|Ga0179596_10641444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	538	Open in IMG/M
3300021168\|Ga0210406_10219932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1569	Open in IMG/M
3300021168\|Ga0210406_10884282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	673	Open in IMG/M
3300022530\|Ga0242658_1071849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	778	Open in IMG/M
3300022533\|Ga0242662_10098937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	829	Open in IMG/M
3300022533\|Ga0242662_10163502	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300022720\|Ga0242672_1147255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	504	Open in IMG/M
3300022726\|Ga0242654_10243456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	642	Open in IMG/M
3300022878\|Ga0247761_1016868	All Organisms → cellular organisms → Bacteria → Proteobacteria	1258	Open in IMG/M
3300022908\|Ga0247779_1205365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	518	Open in IMG/M
3300023079\|Ga0247758_1199412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	556	Open in IMG/M
3300023265\|Ga0247780_1167918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	591	Open in IMG/M
3300023270\|Ga0247784_1013386	All Organisms → cellular organisms → Bacteria → Proteobacteria	1897	Open in IMG/M
3300025906\|Ga0207699_11378619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	522	Open in IMG/M
3300025912\|Ga0207707_10200763	All Organisms → cellular organisms → Bacteria → Proteobacteria	1739	Open in IMG/M
3300025913\|Ga0207695_10016707	All Organisms → cellular organisms → Bacteria → Proteobacteria	8574	Open in IMG/M
3300025913\|Ga0207695_10853656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	790	Open in IMG/M
3300025924\|Ga0207694_10390470	All Organisms → cellular organisms → Bacteria → Proteobacteria	1156	Open in IMG/M
3300025924\|Ga0207694_10906403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	745	Open in IMG/M
3300025924\|Ga0207694_11052284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	689	Open in IMG/M
3300025924\|Ga0207694_11340886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	605	Open in IMG/M
3300025931\|Ga0207644_10525886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	977	Open in IMG/M
3300025934\|Ga0207686_11069999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	657	Open in IMG/M
3300025941\|Ga0207711_10541114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1086	Open in IMG/M
3300025961\|Ga0207712_12055436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300025986\|Ga0207658_10821250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	844	Open in IMG/M
3300026041\|Ga0207639_10367345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1289	Open in IMG/M
3300026067\|Ga0207678_10149809	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300026078\|Ga0207702_10431154	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300027037\|Ga0209005_1045300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300028380\|Ga0268265_12437838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	529	Open in IMG/M
3300028786\|Ga0307517_10510888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	609	Open in IMG/M
3300030000\|Ga0311337_12059990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	502	Open in IMG/M
3300030844\|Ga0075377_11688357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	777	Open in IMG/M
3300030945\|Ga0075373_11670095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	670	Open in IMG/M
3300030967\|Ga0075399_10049499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300030967\|Ga0075399_10056341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300030968\|Ga0075376_11508452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	903	Open in IMG/M
3300030997\|Ga0073997_12002100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	568	Open in IMG/M
3300031057\|Ga0170834_105560896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	806	Open in IMG/M
3300031057\|Ga0170834_108659256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	940	Open in IMG/M
3300031122\|Ga0170822_13758725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1079	Open in IMG/M
3300031128\|Ga0170823_13895002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	782	Open in IMG/M
3300031231\|Ga0170824_108708442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	772	Open in IMG/M
3300031231\|Ga0170824_114101826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	948	Open in IMG/M
3300031231\|Ga0170824_118686611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300031232\|Ga0302323_102681113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	569	Open in IMG/M
3300031474\|Ga0170818_110876170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	522	Open in IMG/M
3300031838\|Ga0307518_10532909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	590	Open in IMG/M
3300031902\|Ga0302322_101671726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	779	Open in IMG/M
3300032828\|Ga0335080_11981501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.39%
Host-Associated	Host-Associated	38.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.39%
Plants	Host-Associated → Plants	38.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.90%
Plant Litter	Environmental → Terrestrial → Plant Litter	4.95%
Peat	Environmental → Terrestrial → Peat	2.97%
Roots	Host-Associated → Plants → Roots	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.81%
Loam	Environmental → Terrestrial → Soil → Loam	11.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	9.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	4.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.97%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.97%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003163	Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003572	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022878	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L111-311C-4	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027037	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030968	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031838	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_102702291	3300001661	Forest Soil	MDHIQFKANQTAAGYVANGLDESTLEAFELHMMGCSECVEDVEVWRAIKLDMPRQRPEIRTRAPQRPLAAFSDWRMAASLLGAGIIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTRLAVLRVPGISRDLRVVA
JGI12627J18819_103246701	3300001867	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSR
JGIcombinedJ26739_1012913542	3300002245	Forest Soil	MDHIQFKANQTAAGYVANGLDESTLEAFELHMMGCSECVEDVEVWRAIKLEMPRQRPEIRTRAPKRPLAAFSDWRMAASLLGAGIIGATGGWLGK
Ga0006759J45824_11465142	3300003163	Avena Fatua Rhizosphere	MDHIQFKTNQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTRLAVLRVPGISKDLRVVALDSEMRELPAADYTS
Ga0007424J51698_10632502	3300003572	Avena Fatua Rhizosphere	MDHIQFKTNQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAVFSDWRMAASLLGAGVIGATGGWLGKATTA
Ga0058899_121798401	3300004631	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQHAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGVSKDL
Ga0070683_1024220591	3300005329	Corn Rhizosphere	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQRPEVRPAARQRKVVYSDWRMAASLVGAGILGAAGGWLGKATTATDLDSTRTVVFNLPAVSRGADECTAVR
Ga0066388_1030902002	3300005332	Tropical Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPKQRPEVRTTAPRRKVAAFSDWRMAASLVGAGILGATGGWLGKATTATDLDSTRTVVFNVPAVS
Ga0070713_1003863871	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGTVRTLTPRRRLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAVRLASDTRLAV
Ga0070663_1019915062	3300005455	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGTVRTLTPRRRLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGAD
Ga0070681_103666662	3300005458	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRRLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDST
Ga0068853_1007158611	3300005539	Corn Rhizosphere	MDHIQFKTNQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQHGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGISKD
Ga0068855_1002777091	3300005563	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDS
Ga0068854_1001599263	3300005578	Corn Rhizosphere	MDHIQFKTNQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRSRLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTRLAVLRVPGISKDLRVVALDSERRELPAVA
Ga0068856_1025966372	3300005614	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGTVRTLTPRRRLAAFSDWRMAASLVGAGVLGATGGWL
Ga0068861_1010950761	3300005719	Switchgrass Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTRLAVLRVPGISKDLRV
Ga0068862_1019827391	3300005844	Switchgrass Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDL
Ga0105240_110775141	3300009093	Corn Rhizosphere	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDIPKQRPQVTTLAPPRRRSAAAFSDWRMAASVVGAGLLGAAGGWLGKATTATDLDSTRTVVFNL
Ga0099792_109312281	3300009143	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPRQRPEVRTVAPKRRYVAFSDWRMAASLVGAGIIGAT
Ga0105241_122729181	3300009174	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRSRLAAFSDWRMAASLVGAGVIGATGGWLGKATTATD
Ga0105237_107396161	3300009545	Corn Rhizosphere	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDIPKQRPQVTTLAPPRRRSAAAFSDWRMAASVVGAGLLGAAGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAVRLAPDTRLAVLRVPGIS
Ga0105238_108816581	3300009551	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTR
Ga0126380_121590041	3300010043	Tropical Forest Soil	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPKQRPQVTTLPPQRRKSAVVFSDWRMAASLVGVGLLGA
Ga0127481_10578332	3300010101	Grasslands Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQANVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSV
Ga0126377_121560122	3300010362	Tropical Forest Soil	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPRQPAVGRTAAPGRRKLAALGDWRMAASLVGAGILGAAGGWLG
Ga0126379_117547211	3300010366	Tropical Forest Soil	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPKQRPQVRPAAPRRPFVAFSDWRMAASLVGAGVLGAAGGWLGKSTTATDLDSTQTVVF
Ga0134126_120731512	3300010396	Terrestrial Soil	MDHTQFKANQTAACYVADGLDESTQEAFELHMMACAECLDDVEAWRVIKLEMPEQRPAARIAARKQYLPAFTDWRMAASLLGAGVVGAAGGWVGKATQVADLD
Ga0126344_11520761	3300010866	Boreal Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHTMGCSECVEDVEVWRAIKLEMPKQRAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLPSV
Ga0126344_12362642	3300010866	Boreal Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQHAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKST
Ga0126361_105301041	3300010876	Boreal Forest Soil	MDHIQFKANQTAAGYVANGLDENTQEAFELHMMGCSECVADVEVWRAIKLEMPRQTSGVRTLAPRRKLAAFTEWRMAASLVGAGVIGVAGGWLGKATTATDLDSTRTVVFNLPSVSR
Ga0105246_103444801	3300011119	Miscanthus Rhizosphere	MDHIQFKTNQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQHGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKA
Ga0150983_106169042	3300011120	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQRTEVRTLPPRRKLAAFSDWRMAASLVGAGVIGAAGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGISRDLRVVALDSEKRELP
Ga0150984_1050007481	3300012469	Avena Fatua Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAVFSDWRMAASLLGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGA
Ga0150984_1069252862	3300012469	Avena Fatua Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKFEMPRPSTSVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDL
Ga0150984_1225713892	3300012469	Avena Fatua Rhizosphere	MDHIQFKTNQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQLGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKA
Ga0157290_100797052	3300012909	Soil	MDHIQFKTNQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKFEMPRSSTSVRTLTPRRKLAAFGDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGAGDCT
Ga0137413_103705022	3300012924	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQSVQVRTLTPRRKLAAFSDSRMAASLVGAGVTRATGGRVGKATTPT
Ga0137419_110268831	3300012925	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDEGTQEAFELHMMGCTECVADVEVWRAIKLEMPRQSAEVRTLVPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDS
Ga0137419_119493071	3300012925	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQRAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLD
Ga0137407_105497251	3300012930	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCNECVADVEVWRAIKLEMPRQTSGVRTLAPRRKLAAFTEWRMAASLVGAGVI
Ga0157374_106047612	3300013296	Miscanthus Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPRQRPEVRTLAPRRKVTAFGDWRMAASLVGAGILGATGGWLGKATTATDLDSTRTVVFNLPAVSRGAG
Ga0157374_126034982	3300013296	Miscanthus Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAMR
Ga0157378_115890041	3300013297	Miscanthus Rhizosphere	MDHIQFKANQTAAGYVANGLDELTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGISKDL
Ga0157372_103357211	3300013307	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGTVRTLTPRRRLAAFSDWRMAASLVGAGVRGATGGWLGKATTATDLDSTRTVVFN
Ga0157376_125898571	3300014969	Miscanthus Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTRLAVLRVPGISKDLRVVALDSEKRE
Ga0137420_12890902	3300015054	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDEHTQEAFELHMMGCSECVADVEVWRAIKLEMPRQSHEVRTLVPRRKLAAFSEWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGAGDCTAMRLASDTRLVVLRVPGISKDLRV
Ga0137418_102836542	3300015241	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDEGTQEAFELHMMGCTECVADVEVWRAIKLEMPRQSAEVRTLVPRRKLAAFSDWNGGERPLPAPPE*
Ga0137418_106596931	3300015241	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQSHEVRTLVPRRKLAAFSEWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGAGDCTAMRLASDTRLVVLRVPGISKDLRV
Ga0206355_13389852	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MDHIQFKTNQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKAT
Ga0179596_105660061	3300021086	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQRAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLVVLRVPGISKDLRVVALDSEKRELPAGD
Ga0179596_106414441	3300021086	Vadose Zone Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQSVQVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAVRLA
Ga0210406_102199321	3300021168	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQRAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTT
Ga0210406_108842822	3300021168	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTRLAVLRVPG
Ga0242658_10718492	3300022530	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATT
Ga0242662_100989372	3300022533	Soil	FELHLMGCSECVEDVEVWRAIKLDMPKQRPEVRSQAPRRRYVAFNDWRMAASLLGAGIIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAVRLAPDTQLAVLRVPGISRDLHVVALTRTSASCLPDSPPHGFSRTVASSCG
Ga0242662_101635022	3300022533	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELRLMGCSECVEDVEVWRAIKLDMPKQRPEVRSQAPRR
Ga0242672_11472551	3300022720	Soil	DHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQHAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGILRDLRVVALDSEKRELPAGEYASRIQP
Ga0242654_102434561	3300022726	Soil	MDHVQFKANQTAAGYVAGGLDDSTQEDFELHFMGCSECIEDVEFWRAIKLEMPKMGLKARTATVHRKSVDFGDWRMAASLVGAGVIGAAGGWLGKATTAADLDSTKTVVFNLPSVSRGADECTALRLAADTQVALVRVAGISGDSHVVALDSQMRALPAAQ
Ga0247761_10168682	3300022878	Plant Litter	MDHIQFKTNQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKFEMPRSSTSVRTLTPRRKLAAFSDWRMAA
Ga0247779_12053652	3300022908	Plant Litter	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVSDVEVWRAIKLEMPRQHAQVHTLTPRRKLAAFSDWR
Ga0247758_11994121	3300023079	Plant Litter	MDHIQFKTNQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKFEMPRSSTSVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGAGDCTAVRLASDTRLAVLRVPGISKDLRVVALDSEK
Ga0247780_11679182	3300023265	Plant Litter	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVSDVEVWRAIKLEMPRQHAQVHTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRG
Ga0247784_10133863	3300023270	Plant Litter	MDHIQFKTNQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKFEMPRSSTSVRTLTPRRKLAAFGDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGAGDCTAVRLASDTRLAVLRVPGISKDLRVVALDSEK
Ga0207699_113786191	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPRQRPEVRSATPRRKLVAFGDWRMAASLV
Ga0207707_102007633	3300025912	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRRLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDST
Ga0207695_100167071	3300025913	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGV
Ga0207695_108536562	3300025913	Corn Rhizosphere	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDIPKQRPQVTTLAPPRRRSAAAFSDWRMAASVVGAGLLG
Ga0207694_103904701	3300025924	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGTVRTLTPRRRLAAFSDWRMAASLVGAGVLGATGGWLGKATTA
Ga0207694_109064031	3300025924	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQSAQVRTLTPRRKVAVFSDWRMAASLVGAGVIGA
Ga0207694_110522842	3300025924	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTRLAVLRVPGISKDLRVVALDSE
Ga0207694_113408861	3300025924	Corn Rhizosphere	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDIPKQRPQVTTLAPPRRRSAAAFSDWRMAASVVGAGLLGAAGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAVR
Ga0207644_105258862	3300025931	Switchgrass Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAMR
Ga0207686_110699992	3300025934	Miscanthus Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGI
Ga0207711_105411141	3300025941	Switchgrass Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTR
Ga0207712_120554362	3300025961	Switchgrass Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLLGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLAS
Ga0207658_108212501	3300025986	Switchgrass Rhizosphere	MDHIQFKTNQTAAGYVANGLDELTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLDSTRTVVFNLPSV
Ga0207639_103673452	3300026041	Corn Rhizosphere	MDHIQFKTNQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQHGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKATTATDLGSTR
Ga0207678_101498091	3300026067	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHGNVRTLTPRRKLAAFSDWRMAASLVGAGVLGATGGWLGKA
Ga0207702_104311542	3300026078	Corn Rhizosphere	MDHIQFKANQTAAGYVANGLDEITQEAFELHMMGCSECVADVEVWRAIKLEMPRQHGNVRTLTPRRKLAAFSDWRMAASLVG
Ga0209005_10453002	3300027037	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTPVRLAPDTRL
Ga0268265_124378381	3300028380	Switchgrass Rhizosphere	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQQGNVRTLTPRRKLAAFSDWRMAASLV
Ga0307517_105108882	3300028786	Ectomycorrhiza	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGV
Ga0311337_120599901	3300030000	Fen	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECIADVEVWRAIKLEMPRQQAEVRTLAPRRRLAAFSDWRMAASLV
Ga0075377_116883571	3300030844	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGA
Ga0075373_116700952	3300030945	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEIWRAIKLEMPKQRADVRTLPPRRKLAAFSDWRMAASLVGAGIIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGISRDLRVVALDSEKRELPAGDY
Ga0075399_100494991	3300030967	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPQQRAEVRTLAPRRKLATFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLR
Ga0075399_100563411	3300030967	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQRAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAMRLAS
Ga0075376_115084522	3300030968	Soil	MDHIQFKANQTAAGYVANGLDENTQEAFEIHMMGCSECVADVEVWRAIKLEMPRQHADVRTLTPRRKVAAFSDWRMAASLVGVGVLGATGGWLGKATTATDLD
Ga0073997_120021001	3300030997	Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQHAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGVSKDLRVV
Ga0170834_1055608961	3300031057	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKAKKKKNNTTKK
Ga0170834_1086592561	3300031057	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQHAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLPSVSRGADDCTAMRL
Ga0170822_137587251	3300031122	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQPAEVRTFAPRRKLAAFSDWRMAASLVGAG
Ga0170823_138950021	3300031128	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQHAEVRTLAPRRKLAAFSDWRMAASLVGAGV
Ga0170824_1087084421	3300031231	Forest Soil	MDHIQFKANQTAAGYVANGLDEGTQEAFELHMMGCTECVADVEVWRAIKLEMPRQSPEVRTLVPRRKLAAFSDWRMAASLVGAGVIGATGGWLGK
Ga0170824_1141018261	3300031231	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQHAEVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAMRLASDTRLAVLRVPGISKDLRVVALDSEKR
Ga0170824_1186866111	3300031231	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQRTDVRTLPPRRKLAAFSDWRMAASLVGAGVIGAAGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGISRDLRV
Ga0302323_1026811131	3300031232	Fen	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPRQRPEVRTTVPRRRVATFSDWRMAASLVGVGLLGAAGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTAVRLASDTQ
Ga0170818_1108761702	3300031474	Forest Soil	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPKQRAEVRTLAPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKSTTATDLDSTRTVVFNLP
Ga0307518_105329091	3300031838	Ectomycorrhiza	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVADVEVWRAIKLEMPRQSVQVRTLTPRRKLAAFSDWRMAASLVGAGVIGATGGWLGKATTATDLDSTRTVVFNLPSVSRGADDCTAMRLASDTRLAVLRVPGISR
Ga0302322_1016717262	3300031902	Fen	MDHIQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLDMPRQRPEVRTTVPRRRVATFSDWRMAASLVGVGLLGAAGGWLGKATTATDLDSTRTVVFNLPSVSRGADECTA
Ga0335080_119815011	3300032828	Soil	MDHMQFKANQTAAGYVANGLDESTQEAFELHMMGCSECVEDVEVWRAIKLEMPRQRAEVRTLAPQKRYAVFSDWRMAASLVGAGVIGATGGWLGKATTATDMDSTQTVVFNLPSVSRGADECTAMRLASDTRLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103999

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences