Basic Information | |
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Family ID | F103967 |
Family Type | Metagenome |
Number of Sequences | 101 |
Average Sequence Length | 49 residues |
Representative Sequence | QAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Number of Associated Samples | 79 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 29.70 % |
% of genes from short scaffolds (< 2000 bps) | 29.70 % |
Associated GOLD sequencing projects | 76 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (70.297 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.495 % of family members) |
Environment Ontology (ENVO) | Unclassified (69.307 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (51.485 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 81.25% β-sheet: 0.00% Coil/Unstructured: 18.75% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Soil Tropical Forest Soil Grasslands Soil Soil Grasslands Soil Soil Forest Soil Soil Hardwood Forest Soil Tropical Forest Soil Corn, Switchgrass And Miscanthus Rhizosphere Populus Rhizosphere |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
AF_2010_repII_A01DRAFT_10254101 | 3300000580 | Forest Soil | AQAGSSWSTYLLLLLGAALAAASTMWFFLRMASIFARRAANSRMDMSNP* |
AF_2010_repII_A1DRAFT_100665724 | 3300000597 | Forest Soil | AQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFAXRXTNSRLHMSNP* |
AF_2010_repII_A100DRAFT_10098711 | 3300000655 | Forest Soil | AESSWSTYLLLLLGAALAAASAVWFFLRMPSIFARRAANSRMHMSNP* |
Ga0066395_109103622 | 3300004633 | Tropical Forest Soil | YLLLILGAALAATAVWFFTKLTAVYARRAAGPPMHMRSEW* |
Ga0066388_1061609221 | 3300005332 | Tropical Forest Soil | AESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP* |
Ga0066692_104044681 | 3300005555 | Soil | AGEAHEPAHAAATVESPWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSKS |
Ga0066704_106370742 | 3300005557 | Soil | EAHEPAHAAATVESPWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSKS* |
Ga0066903_1011465302 | 3300005764 | Tropical Forest Soil | MSSIVPPRKSSWSSYLSLLLGAALAAASAMWFFLRVASIFARRAANLRMHMSNP* |
Ga0066903_1075586161 | 3300005764 | Tropical Forest Soil | QAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP* |
Ga0070715_103155751 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | ESSWSTYLLLILGAALAVAAAVWFFAKLTAVYARRAAGPRLHMRSEW* |
Ga0070712_1017136652 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | AESSWSTYLLLLLGAALAAASATWFLVKLSPVYARRAAGPRMHTSEWQ* |
Ga0075425_1000354671 | 3300006854 | Populus Rhizosphere | LLILGAALAAASATWFLVKMAPVYARRAAGPRMHTSEWQ* |
Ga0126384_106089391 | 3300010046 | Tropical Forest Soil | TESSWSTYLLWILGAALAAASAMWFFVKMAPVYARRAAGPRMHMRNQ* |
Ga0126384_108731891 | 3300010046 | Tropical Forest Soil | AQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP* |
Ga0126382_101076333 | 3300010047 | Tropical Forest Soil | ETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP* |
Ga0126382_124899971 | 3300010047 | Tropical Forest Soil | STYLLLLMLGAALAAAAGLWFFAKMTPVYARRAAGPRVHMPSEW* |
Ga0126373_120633951 | 3300010048 | Tropical Forest Soil | AAATVSTESSWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSELQ* |
Ga0134080_100501861 | 3300010333 | Grasslands Soil | AHAAAIVESPWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSKS* |
Ga0126370_103419231 | 3300010358 | Tropical Forest Soil | SWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP* |
Ga0126370_126086403 | 3300010358 | Tropical Forest Soil | AAETGQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP* |
Ga0126378_124731352 | 3300010361 | Tropical Forest Soil | AAETAQAESYWLLLLGAALAAASATWFLVKMSPVYARRAERPRTL* |
Ga0126377_127823761 | 3300010362 | Tropical Forest Soil | SWITYLLLILGAALAAACAFWFFSRTTSLFARRAANPHMSNS* |
Ga0126379_112417392 | 3300010366 | Tropical Forest Soil | ESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP* |
Ga0126381_1044516771 | 3300010376 | Tropical Forest Soil | STYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP* |
Ga0126383_130736832 | 3300010398 | Tropical Forest Soil | NELDRAAETAQAESSWSTYLLLLLGAALAAASATWFLRRAAGPRMHTSEWQ* |
Ga0126375_113208341 | 3300012948 | Tropical Forest Soil | SWSTYLLLIFAALAAASAMWFLVKMAPVYARRAAGPRMHTSERQ* |
Ga0182041_106557991 | 3300016294 | Soil | STYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0182033_110355521 | 3300016319 | Soil | LDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
Ga0182035_109236311 | 3300016341 | Soil | ETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0182035_111557701 | 3300016341 | Soil | EVNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
Ga0182032_111912541 | 3300016357 | Soil | AESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
Ga0182032_113417162 | 3300016357 | Soil | DRAAETAQAESSWSTYLLLLLGAALAAASAMWFLLRMASIFARRAANSRMHMSNP |
Ga0182034_114720501 | 3300016371 | Soil | WSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0182037_114077492 | 3300016404 | Soil | AAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
Ga0182037_115498671 | 3300016404 | Soil | AESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0182037_116890372 | 3300016404 | Soil | AAATVSTESSWSTYLLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
Ga0182037_117435001 | 3300016404 | Soil | LDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0066662_100844564 | 3300018468 | Grasslands Soil | DAGEAHEPDHAAATVESSWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSK |
Ga0209239_10254184 | 3300026310 | Grasslands Soil | VSTESSWSTYLLLILGAALAAASATWFLVKMAPVYARRAAGPRTTSEWQ |
Ga0209056_100308546 | 3300026538 | Soil | GEAHEPDHAAATVESSWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSKS |
Ga0307278_101507572 | 3300028878 | Soil | WITYLLLILGAALAAASVMWFFSRMTSMLARRAANPRMHMSNS |
Ga0318541_103888011 | 3300031545 | Soil | AETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318538_100641031 | 3300031546 | Soil | AAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318571_103550771 | 3300031549 | Soil | RAAATVSTESSWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSERQ |
Ga0318573_101017194 | 3300031564 | Soil | WSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318515_101705733 | 3300031572 | Soil | TYLLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
Ga0318515_105291262 | 3300031572 | Soil | TYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
Ga0310915_106459161 | 3300031573 | Soil | ESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0318542_100502481 | 3300031668 | Soil | ARKRNAAATVSTESSWSTYLLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
Ga0318572_109605841 | 3300031681 | Soil | NEVNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
Ga0318496_106251951 | 3300031713 | Soil | VNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0318493_103958481 | 3300031723 | Soil | LLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
Ga0318493_106495763 | 3300031723 | Soil | YLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0318493_107703181 | 3300031723 | Soil | YLLLLLGAALAAASAMWFFLRMASIFARRAANSGMHMSNP |
Ga0318500_100496061 | 3300031724 | Soil | SWSTYLLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
Ga0318500_102169801 | 3300031724 | Soil | QAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0318501_100641611 | 3300031736 | Soil | AESSWSTYLLLLLGAALAAASAMWFLLRMASIFARRAANSRMHMSNP |
Ga0318537_100606594 | 3300031763 | Soil | QAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318537_102789761 | 3300031763 | Soil | LLLLLGAALAAASAMWFFLRMASIFARRAANPRVHMSNP |
Ga0318554_100705834 | 3300031765 | Soil | SWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318554_105992192 | 3300031765 | Soil | RAAETAQAESSWSTYLLLLLGAVLAAASAMWFLVKMAPVYARRAAGPRMHTSEWQ |
Ga0318509_104746381 | 3300031768 | Soil | ESSWTTYLLLLLGAALAAASAMWFFLRMASIFARRAANPRMHMSNP |
Ga0318509_105447333 | 3300031768 | Soil | VNELDRAAETGQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0318521_100466131 | 3300031770 | Soil | TAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0318521_102037291 | 3300031770 | Soil | AQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0318543_101864432 | 3300031777 | Soil | TETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318547_104285532 | 3300031781 | Soil | NELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0318529_103012262 | 3300031792 | Soil | DRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0318567_102366051 | 3300031821 | Soil | PNEVNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318499_100615103 | 3300031832 | Soil | AETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0310917_106106193 | 3300031833 | Soil | AAETGQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0318517_100306951 | 3300031835 | Soil | AQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0306919_103030453 | 3300031879 | Soil | SWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0306919_107112871 | 3300031879 | Soil | SVSTKSSWSTYLLLIFAALAAASAMWFLVKMAPVYARRAAGPRMHTSERQ |
Ga0318544_101762632 | 3300031880 | Soil | ELDRVAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
Ga0306925_116732731 | 3300031890 | Soil | AAATVSTSWSTYLLLILGAALAAASAMWFFVKMAPVYARRAAGPRMHMRNQ |
Ga0318522_102334992 | 3300031894 | Soil | TYLLLLLGAVLAAASAMWFLVKMAPVYARRAAGPRMHTSEWQ |
Ga0318551_108252601 | 3300031896 | Soil | ELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0306923_118953922 | 3300031910 | Soil | TYLLLILGAALAAASAVWFFVKMIPVYARRAAGPRMHMRNQWL |
Ga0310912_101029831 | 3300031941 | Soil | AQVESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0310916_108602982 | 3300031942 | Soil | ELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0310916_113354202 | 3300031942 | Soil | SWITYLLLILGAALAAACAFWFFSRTTSLFARRAENPRSA |
Ga0310913_106681411 | 3300031945 | Soil | AETTQAESSWTTYLLLLLGAALAAASAMWFFLRMASIFARRAANPRMHMSNP |
Ga0310913_108572813 | 3300031945 | Soil | LDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0306926_118509501 | 3300031954 | Soil | STYLLLLLGAALAAASAMWFLLRMASIFARRAANSRMHMSNP |
Ga0318530_102093913 | 3300031959 | Soil | DRAAATVSTESSWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSERQ |
Ga0306922_102490831 | 3300032001 | Soil | YLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
Ga0318507_100062391 | 3300032025 | Soil | VPDESSWITYLLLILGAALAAACAFWFFSRTTSLFARRAENPRSA |
Ga0318549_103652361 | 3300032041 | Soil | LLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
Ga0318558_105709121 | 3300032044 | Soil | TYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0318506_104079861 | 3300032052 | Soil | SWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSERQ |
Ga0318533_103494891 | 3300032059 | Soil | SWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
Ga0318510_101734252 | 3300032064 | Soil | VNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318553_105357243 | 3300032068 | Soil | AATVSTESFWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSERQ |
Ga0306924_101299841 | 3300032076 | Soil | AAAVPAETSWITYLLLILGAALAAASAVWFFSRMTPMFARRAANPRLRMSNS |
Ga0306924_122909121 | 3300032076 | Soil | AAAVSTESSWSTYLLLILGAALAAASAVWFFVKMIPVYARRAAGPRMHMRNQWL |
Ga0318518_101207051 | 3300032090 | Soil | ITYLLLILGAALAAASAVWFFSRMTPMFARRAANPRLRMSNS |
Ga0318518_104944141 | 3300032090 | Soil | NELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
Ga0318577_105642172 | 3300032091 | Soil | AETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
Ga0307471_1042296082 | 3300032180 | Hardwood Forest Soil | SWSTYLLLILGAALAAASAMWLFVKMAPVYARRAAGPRMHMRNQ |
Ga0310914_113217431 | 3300033289 | Soil | SAAVPDESSWITYLLLILGAALAAACAFWFFSRTTSLFARRAANPRMSNS |
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