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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F103967 |
| Family Type | Metagenome |
| Number of Sequences | 101 |
| Average Sequence Length | 49 residues |
| Representative Sequence | QAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Number of Associated Samples | 79 |
| Number of Associated Scaffolds | 101 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 29.70 % |
| % of genes from short scaffolds (< 2000 bps) | 29.70 % |
| Associated GOLD sequencing projects | 76 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (70.297 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.495 % of family members) |
| Environment Ontology (ENVO) | Unclassified (69.307 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Unclassified (51.485 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 81.25% β-sheet: 0.00% Coil/Unstructured: 18.75% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 101 Family Scaffolds |
|---|---|---|
| PF00216 | Bac_DNA_binding | 9.90 |
| PF10431 | ClpB_D2-small | 3.96 |
| PF14294 | DUF4372 | 1.98 |
| PF02515 | CoA_transf_3 | 1.98 |
| PF13545 | HTH_Crp_2 | 0.99 |
| PF00313 | CSD | 0.99 |
| PF07690 | MFS_1 | 0.99 |
| PF04392 | ABC_sub_bind | 0.99 |
| PF13767 | DUF4168 | 0.99 |
| PF05199 | GMC_oxred_C | 0.99 |
| PF01255 | Prenyltransf | 0.99 |
| PF00264 | Tyrosinase | 0.99 |
| PF01799 | Fer2_2 | 0.99 |
| PF00589 | Phage_integrase | 0.99 |
| PF01042 | Ribonuc_L-PSP | 0.99 |
| PF02518 | HATPase_c | 0.99 |
| COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
|---|---|---|---|
| COG0776 | Bacterial nucleoid DNA-binding protein IHF-alpha | Replication, recombination and repair [L] | 9.90 |
| COG1804 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases | Lipid transport and metabolism [I] | 1.98 |
| COG0020 | Undecaprenyl pyrophosphate synthase | Lipid transport and metabolism [I] | 0.99 |
| COG0251 | Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family | Defense mechanisms [V] | 0.99 |
| COG2303 | Choline dehydrogenase or related flavoprotein | Lipid transport and metabolism [I] | 0.99 |
| COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 0.99 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 70.30 % |
| All Organisms | root | All Organisms | 29.70 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300004633|Ga0066395_10910362 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 533 | Open in IMG/M |
| 3300005332|Ga0066388_106160922 | All Organisms → cellular organisms → Bacteria | 605 | Open in IMG/M |
| 3300006163|Ga0070715_10315575 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 842 | Open in IMG/M |
| 3300010047|Ga0126382_12489997 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 504 | Open in IMG/M |
| 3300010048|Ga0126373_12063395 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 632 | Open in IMG/M |
| 3300010398|Ga0126383_13073683 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 545 | Open in IMG/M |
| 3300012948|Ga0126375_11320834 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 607 | Open in IMG/M |
| 3300016294|Ga0182041_10655799 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 927 | Open in IMG/M |
| 3300016357|Ga0182032_11191254 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 655 | Open in IMG/M |
| 3300016404|Ga0182037_11549867 | All Organisms → cellular organisms → Bacteria | 588 | Open in IMG/M |
| 3300031668|Ga0318542_10050248 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1889 | Open in IMG/M |
| 3300031681|Ga0318572_10960584 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 507 | Open in IMG/M |
| 3300031765|Ga0318554_10599219 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 621 | Open in IMG/M |
| 3300031768|Ga0318509_10474638 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 699 | Open in IMG/M |
| 3300031833|Ga0310917_10610619 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 740 | Open in IMG/M |
| 3300031879|Ga0306919_10303045 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1213 | Open in IMG/M |
| 3300031879|Ga0306919_10711287 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 773 | Open in IMG/M |
| 3300031890|Ga0306925_11673273 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 615 | Open in IMG/M |
| 3300031894|Ga0318522_10233499 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 697 | Open in IMG/M |
| 3300031910|Ga0306923_11895392 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 609 | Open in IMG/M |
| 3300031942|Ga0310916_11335420 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 589 | Open in IMG/M |
| 3300031945|Ga0310913_10668141 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 735 | Open in IMG/M |
| 3300031959|Ga0318530_10209391 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 800 | Open in IMG/M |
| 3300032041|Ga0318549_10365236 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 650 | Open in IMG/M |
| 3300032052|Ga0318506_10407986 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 602 | Open in IMG/M |
| 3300032059|Ga0318533_10349489 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 1077 | Open in IMG/M |
| 3300032068|Ga0318553_10535724 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 613 | Open in IMG/M |
| 3300032076|Ga0306924_12290912 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 548 | Open in IMG/M |
| 3300032091|Ga0318577_10564217 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 541 | Open in IMG/M |
| 3300032180|Ga0307471_104229608 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 507 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 50.50% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 18.81% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 12.87% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 3.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.97% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 2.97% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.98% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.99% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.99% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.99% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.99% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000580 | Forest soil microbial communities from Amazon forest - 2010 replicate II A01 | Environmental | Open in IMG/M |
| 3300000597 | Forest soil microbial communities from Amazon forest - 2010 replicate II A1 | Environmental | Open in IMG/M |
| 3300000655 | Forest soil microbial communities from Amazon forest - 2010 replicate II A100 | Environmental | Open in IMG/M |
| 3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
| 3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
| 3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
| 3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
| 3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
| 3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
| 3300026310 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026538 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes) | Environmental | Open in IMG/M |
| 3300028878 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117 | Environmental | Open in IMG/M |
| 3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
| 3300031546 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23 | Environmental | Open in IMG/M |
| 3300031549 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24 | Environmental | Open in IMG/M |
| 3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
| 3300031572 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19 | Environmental | Open in IMG/M |
| 3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
| 3300031668 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23 | Environmental | Open in IMG/M |
| 3300031681 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20 | Environmental | Open in IMG/M |
| 3300031713 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22 | Environmental | Open in IMG/M |
| 3300031723 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23 | Environmental | Open in IMG/M |
| 3300031724 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20 | Environmental | Open in IMG/M |
| 3300031736 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21 | Environmental | Open in IMG/M |
| 3300031763 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29 | Environmental | Open in IMG/M |
| 3300031765 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22 | Environmental | Open in IMG/M |
| 3300031768 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22 | Environmental | Open in IMG/M |
| 3300031770 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17 | Environmental | Open in IMG/M |
| 3300031777 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24 | Environmental | Open in IMG/M |
| 3300031781 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20 | Environmental | Open in IMG/M |
| 3300031792 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23 | Environmental | Open in IMG/M |
| 3300031821 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20 | Environmental | Open in IMG/M |
| 3300031832 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25 | Environmental | Open in IMG/M |
| 3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
| 3300031835 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21 | Environmental | Open in IMG/M |
| 3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
| 3300031880 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25 | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031894 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18 | Environmental | Open in IMG/M |
| 3300031896 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19 | Environmental | Open in IMG/M |
| 3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
| 3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
| 3300031942 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176 | Environmental | Open in IMG/M |
| 3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
| 3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
| 3300031959 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032025 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20 | Environmental | Open in IMG/M |
| 3300032041 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22 | Environmental | Open in IMG/M |
| 3300032044 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20 | Environmental | Open in IMG/M |
| 3300032052 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19 | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300032064 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17 | Environmental | Open in IMG/M |
| 3300032068 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21 | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032090 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22 | Environmental | Open in IMG/M |
| 3300032091 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300033289 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| AF_2010_repII_A01DRAFT_10254101 | 3300000580 | Forest Soil | AQAGSSWSTYLLLLLGAALAAASTMWFFLRMASIFARRAANSRMDMSNP* |
| AF_2010_repII_A1DRAFT_100665724 | 3300000597 | Forest Soil | AQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFAXRXTNSRLHMSNP* |
| AF_2010_repII_A100DRAFT_10098711 | 3300000655 | Forest Soil | AESSWSTYLLLLLGAALAAASAVWFFLRMPSIFARRAANSRMHMSNP* |
| Ga0066395_109103622 | 3300004633 | Tropical Forest Soil | YLLLILGAALAATAVWFFTKLTAVYARRAAGPPMHMRSEW* |
| Ga0066388_1061609221 | 3300005332 | Tropical Forest Soil | AESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP* |
| Ga0066692_104044681 | 3300005555 | Soil | AGEAHEPAHAAATVESPWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSKS |
| Ga0066704_106370742 | 3300005557 | Soil | EAHEPAHAAATVESPWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSKS* |
| Ga0066903_1011465302 | 3300005764 | Tropical Forest Soil | MSSIVPPRKSSWSSYLSLLLGAALAAASAMWFFLRVASIFARRAANLRMHMSNP* |
| Ga0066903_1075586161 | 3300005764 | Tropical Forest Soil | QAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP* |
| Ga0070715_103155751 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | ESSWSTYLLLILGAALAVAAAVWFFAKLTAVYARRAAGPRLHMRSEW* |
| Ga0070712_1017136652 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | AESSWSTYLLLLLGAALAAASATWFLVKLSPVYARRAAGPRMHTSEWQ* |
| Ga0075425_1000354671 | 3300006854 | Populus Rhizosphere | LLILGAALAAASATWFLVKMAPVYARRAAGPRMHTSEWQ* |
| Ga0126384_106089391 | 3300010046 | Tropical Forest Soil | TESSWSTYLLWILGAALAAASAMWFFVKMAPVYARRAAGPRMHMRNQ* |
| Ga0126384_108731891 | 3300010046 | Tropical Forest Soil | AQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP* |
| Ga0126382_101076333 | 3300010047 | Tropical Forest Soil | ETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP* |
| Ga0126382_124899971 | 3300010047 | Tropical Forest Soil | STYLLLLMLGAALAAAAGLWFFAKMTPVYARRAAGPRVHMPSEW* |
| Ga0126373_120633951 | 3300010048 | Tropical Forest Soil | AAATVSTESSWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSELQ* |
| Ga0134080_100501861 | 3300010333 | Grasslands Soil | AHAAAIVESPWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSKS* |
| Ga0126370_103419231 | 3300010358 | Tropical Forest Soil | SWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP* |
| Ga0126370_126086403 | 3300010358 | Tropical Forest Soil | AAETGQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP* |
| Ga0126378_124731352 | 3300010361 | Tropical Forest Soil | AAETAQAESYWLLLLGAALAAASATWFLVKMSPVYARRAERPRTL* |
| Ga0126377_127823761 | 3300010362 | Tropical Forest Soil | SWITYLLLILGAALAAACAFWFFSRTTSLFARRAANPHMSNS* |
| Ga0126379_112417392 | 3300010366 | Tropical Forest Soil | ESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP* |
| Ga0126381_1044516771 | 3300010376 | Tropical Forest Soil | STYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP* |
| Ga0126383_130736832 | 3300010398 | Tropical Forest Soil | NELDRAAETAQAESSWSTYLLLLLGAALAAASATWFLRRAAGPRMHTSEWQ* |
| Ga0126375_113208341 | 3300012948 | Tropical Forest Soil | SWSTYLLLIFAALAAASAMWFLVKMAPVYARRAAGPRMHTSERQ* |
| Ga0182041_106557991 | 3300016294 | Soil | STYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0182033_110355521 | 3300016319 | Soil | LDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
| Ga0182035_109236311 | 3300016341 | Soil | ETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0182035_111557701 | 3300016341 | Soil | EVNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
| Ga0182032_111912541 | 3300016357 | Soil | AESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
| Ga0182032_113417162 | 3300016357 | Soil | DRAAETAQAESSWSTYLLLLLGAALAAASAMWFLLRMASIFARRAANSRMHMSNP |
| Ga0182034_114720501 | 3300016371 | Soil | WSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0182037_114077492 | 3300016404 | Soil | AAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
| Ga0182037_115498671 | 3300016404 | Soil | AESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0182037_116890372 | 3300016404 | Soil | AAATVSTESSWSTYLLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
| Ga0182037_117435001 | 3300016404 | Soil | LDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0066662_100844564 | 3300018468 | Grasslands Soil | DAGEAHEPDHAAATVESSWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSK |
| Ga0209239_10254184 | 3300026310 | Grasslands Soil | VSTESSWSTYLLLILGAALAAASATWFLVKMAPVYARRAAGPRTTSEWQ |
| Ga0209056_100308546 | 3300026538 | Soil | GEAHEPDHAAATVESSWITYLLLILGAALAAASAMWLFSGMRSPFARQAANPRMHMSKS |
| Ga0307278_101507572 | 3300028878 | Soil | WITYLLLILGAALAAASVMWFFSRMTSMLARRAANPRMHMSNS |
| Ga0318541_103888011 | 3300031545 | Soil | AETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318538_100641031 | 3300031546 | Soil | AAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318571_103550771 | 3300031549 | Soil | RAAATVSTESSWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSERQ |
| Ga0318573_101017194 | 3300031564 | Soil | WSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318515_101705733 | 3300031572 | Soil | TYLLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
| Ga0318515_105291262 | 3300031572 | Soil | TYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
| Ga0310915_106459161 | 3300031573 | Soil | ESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0318542_100502481 | 3300031668 | Soil | ARKRNAAATVSTESSWSTYLLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
| Ga0318572_109605841 | 3300031681 | Soil | NEVNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
| Ga0318496_106251951 | 3300031713 | Soil | VNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0318493_103958481 | 3300031723 | Soil | LLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
| Ga0318493_106495763 | 3300031723 | Soil | YLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0318493_107703181 | 3300031723 | Soil | YLLLLLGAALAAASAMWFFLRMASIFARRAANSGMHMSNP |
| Ga0318500_100496061 | 3300031724 | Soil | SWSTYLLLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
| Ga0318500_102169801 | 3300031724 | Soil | QAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0318501_100641611 | 3300031736 | Soil | AESSWSTYLLLLLGAALAAASAMWFLLRMASIFARRAANSRMHMSNP |
| Ga0318537_100606594 | 3300031763 | Soil | QAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318537_102789761 | 3300031763 | Soil | LLLLLGAALAAASAMWFFLRMASIFARRAANPRVHMSNP |
| Ga0318554_100705834 | 3300031765 | Soil | SWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318554_105992192 | 3300031765 | Soil | RAAETAQAESSWSTYLLLLLGAVLAAASAMWFLVKMAPVYARRAAGPRMHTSEWQ |
| Ga0318509_104746381 | 3300031768 | Soil | ESSWTTYLLLLLGAALAAASAMWFFLRMASIFARRAANPRMHMSNP |
| Ga0318509_105447333 | 3300031768 | Soil | VNELDRAAETGQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0318521_100466131 | 3300031770 | Soil | TAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0318521_102037291 | 3300031770 | Soil | AQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0318543_101864432 | 3300031777 | Soil | TETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318547_104285532 | 3300031781 | Soil | NELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0318529_103012262 | 3300031792 | Soil | DRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0318567_102366051 | 3300031821 | Soil | PNEVNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318499_100615103 | 3300031832 | Soil | AETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0310917_106106193 | 3300031833 | Soil | AAETGQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0318517_100306951 | 3300031835 | Soil | AQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0306919_103030453 | 3300031879 | Soil | SWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0306919_107112871 | 3300031879 | Soil | SVSTKSSWSTYLLLIFAALAAASAMWFLVKMAPVYARRAAGPRMHTSERQ |
| Ga0318544_101762632 | 3300031880 | Soil | ELDRVAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
| Ga0306925_116732731 | 3300031890 | Soil | AAATVSTSWSTYLLLILGAALAAASAMWFFVKMAPVYARRAAGPRMHMRNQ |
| Ga0318522_102334992 | 3300031894 | Soil | TYLLLLLGAVLAAASAMWFLVKMAPVYARRAAGPRMHTSEWQ |
| Ga0318551_108252601 | 3300031896 | Soil | ELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0306923_118953922 | 3300031910 | Soil | TYLLLILGAALAAASAVWFFVKMIPVYARRAAGPRMHMRNQWL |
| Ga0310912_101029831 | 3300031941 | Soil | AQVESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0310916_108602982 | 3300031942 | Soil | ELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0310916_113354202 | 3300031942 | Soil | SWITYLLLILGAALAAACAFWFFSRTTSLFARRAENPRSA |
| Ga0310913_106681411 | 3300031945 | Soil | AETTQAESSWTTYLLLLLGAALAAASAMWFFLRMASIFARRAANPRMHMSNP |
| Ga0310913_108572813 | 3300031945 | Soil | LDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0306926_118509501 | 3300031954 | Soil | STYLLLLLGAALAAASAMWFLLRMASIFARRAANSRMHMSNP |
| Ga0318530_102093913 | 3300031959 | Soil | DRAAATVSTESSWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSERQ |
| Ga0306922_102490831 | 3300032001 | Soil | YLLLLLGAALAAASAMWFFLRMASIFARRAANSRMHMSNP |
| Ga0318507_100062391 | 3300032025 | Soil | VPDESSWITYLLLILGAALAAACAFWFFSRTTSLFARRAENPRSA |
| Ga0318549_103652361 | 3300032041 | Soil | LLILGAALAAASATWFLVKMPPVYARRAAGLRMHTSEWQ |
| Ga0318558_105709121 | 3300032044 | Soil | TYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0318506_104079861 | 3300032052 | Soil | SWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSERQ |
| Ga0318533_103494891 | 3300032059 | Soil | SWSTYLLLLLGAALAAASAMWFFLRMASIFARRAANLRMHMSNP |
| Ga0318510_101734252 | 3300032064 | Soil | VNELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318553_105357243 | 3300032068 | Soil | AATVSTESFWSTYLLLIFAALAAASATWFLVKMAPVYARRAAGPRMHTSERQ |
| Ga0306924_101299841 | 3300032076 | Soil | AAAVPAETSWITYLLLILGAALAAASAVWFFSRMTPMFARRAANPRLRMSNS |
| Ga0306924_122909121 | 3300032076 | Soil | AAAVSTESSWSTYLLLILGAALAAASAVWFFVKMIPVYARRAAGPRMHMRNQWL |
| Ga0318518_101207051 | 3300032090 | Soil | ITYLLLILGAALAAASAVWFFSRMTPMFARRAANPRLRMSNS |
| Ga0318518_104944141 | 3300032090 | Soil | NELDRAAETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRATNSRLHMSNP |
| Ga0318577_105642172 | 3300032091 | Soil | AETAQAESSWSTYLLLLLGAALAAASAMWFFLRMASIFARRAAGPRMHTS |
| Ga0307471_1042296082 | 3300032180 | Hardwood Forest Soil | SWSTYLLLILGAALAAASAMWLFVKMAPVYARRAAGPRMHMRNQ |
| Ga0310914_113217431 | 3300033289 | Soil | SAAVPDESSWITYLLLILGAALAAACAFWFFSRTTSLFARRAANPRMSNS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |