NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F103959

Metagenome / Metatranscriptome Family F103959

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103959
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 52 residues
Representative Sequence MTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHA
Number of Associated Samples 98
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 99.01 %
% of genes from short scaffolds (< 2000 bps) 96.04 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (63.366 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(37.624 % of family members)
Environment Ontology (ENVO) Unclassified
(36.634 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.535 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 4.26%    Coil/Unstructured: 95.74%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF03575Peptidase_S51 55.45
PF00005ABC_tran 2.97
PF00733Asn_synthase 0.99
PF01061ABC2_membrane 0.99



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.37 %
All OrganismsrootAll Organisms36.63 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559006|FI_contig02938Not Available1921Open in IMG/M
3300001991|JGI24743J22301_10151030Not Available520Open in IMG/M
3300004114|Ga0062593_101668508All Organisms → cellular organisms → Bacteria → Terrabacteria group695Open in IMG/M
3300004479|Ga0062595_101173767Not Available679Open in IMG/M
3300005164|Ga0066815_10043954All Organisms → cellular organisms → Bacteria → Terrabacteria group717Open in IMG/M
3300005166|Ga0066674_10436199Not Available601Open in IMG/M
3300005172|Ga0066683_10803834Not Available547Open in IMG/M
3300005186|Ga0066676_11018216Not Available550Open in IMG/M
3300005440|Ga0070705_100289607Not Available1168Open in IMG/M
3300005536|Ga0070697_100024429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4810Open in IMG/M
3300005545|Ga0070695_100501830Not Available938Open in IMG/M
3300005553|Ga0066695_10584631Not Available673Open in IMG/M
3300005556|Ga0066707_10297448Not Available1057Open in IMG/M
3300006032|Ga0066696_10597981Not Available717Open in IMG/M
3300006163|Ga0070715_10454595All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300006604|Ga0074060_12019347Not Available573Open in IMG/M
3300006804|Ga0079221_10583412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia749Open in IMG/M
3300006954|Ga0079219_11847919Not Available567Open in IMG/M
3300010048|Ga0126373_13130446Not Available515Open in IMG/M
3300012202|Ga0137363_11393456Not Available591Open in IMG/M
3300012203|Ga0137399_11074453Not Available677Open in IMG/M
3300012210|Ga0137378_10142253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura2221Open in IMG/M
3300012285|Ga0137370_10309647Not Available944Open in IMG/M
3300012351|Ga0137386_10448840Not Available929Open in IMG/M
3300012354|Ga0137366_11120391Not Available540Open in IMG/M
3300012494|Ga0157341_1022216Not Available633Open in IMG/M
3300012957|Ga0164303_10621190All Organisms → cellular organisms → Bacteria → Terrabacteria group715Open in IMG/M
3300012984|Ga0164309_11258451Not Available624Open in IMG/M
3300014166|Ga0134079_10098530Not Available1112Open in IMG/M
3300015372|Ga0132256_101842456All Organisms → cellular organisms → Bacteria → Terrabacteria group713Open in IMG/M
3300016270|Ga0182036_10976829Not Available697Open in IMG/M
3300016357|Ga0182032_10997995All Organisms → cellular organisms → Bacteria → Terrabacteria group715Open in IMG/M
3300017966|Ga0187776_11543329Not Available511Open in IMG/M
3300020002|Ga0193730_1066712Not Available1028Open in IMG/M
3300020579|Ga0210407_10129013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1938Open in IMG/M
3300020582|Ga0210395_10153388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1720Open in IMG/M
3300021178|Ga0210408_10152540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1830Open in IMG/M
3300021180|Ga0210396_11250619Not Available619Open in IMG/M
3300021405|Ga0210387_10893470All Organisms → cellular organisms → Bacteria → Terrabacteria group782Open in IMG/M
3300021405|Ga0210387_11895932Not Available500Open in IMG/M
3300021479|Ga0210410_10722755Not Available878Open in IMG/M
3300021560|Ga0126371_12425428Not Available634Open in IMG/M
3300024251|Ga0247679_1044960All Organisms → cellular organisms → Bacteria → Terrabacteria group742Open in IMG/M
3300025315|Ga0207697_10419425Not Available594Open in IMG/M
3300025899|Ga0207642_10333679Not Available889Open in IMG/M
3300025911|Ga0207654_10239552Not Available1212Open in IMG/M
3300025917|Ga0207660_10392857Not Available1116Open in IMG/M
3300025928|Ga0207700_10004689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales8101Open in IMG/M
3300026041|Ga0207639_11069641All Organisms → cellular organisms → Bacteria → Terrabacteria group756Open in IMG/M
3300026494|Ga0257159_1045843All Organisms → cellular organisms → Bacteria → Terrabacteria group740Open in IMG/M
3300026528|Ga0209378_1270802Not Available540Open in IMG/M
3300026547|Ga0209156_10128376Not Available1239Open in IMG/M
3300026920|Ga0208575_1024746Not Available537Open in IMG/M
3300027119|Ga0209522_1008348Not Available1076Open in IMG/M
3300027401|Ga0208637_1010757Not Available927Open in IMG/M
3300027517|Ga0209113_1041954Not Available657Open in IMG/M
3300027576|Ga0209003_1038238All Organisms → cellular organisms → Bacteria → Terrabacteria group833Open in IMG/M
3300027725|Ga0209178_1235570All Organisms → cellular organisms → Bacteria → Terrabacteria group658Open in IMG/M
3300027725|Ga0209178_1383285Not Available531Open in IMG/M
3300027787|Ga0209074_10350280Not Available605Open in IMG/M
3300028716|Ga0307311_10051093Not Available1099Open in IMG/M
3300031199|Ga0307495_10259956Not Available503Open in IMG/M
3300031549|Ga0318571_10170800All Organisms → cellular organisms → Bacteria → Terrabacteria group762Open in IMG/M
3300031668|Ga0318542_10264138All Organisms → cellular organisms → Bacteria → Terrabacteria group877Open in IMG/M
3300031680|Ga0318574_10463724All Organisms → cellular organisms → Bacteria → Terrabacteria group741Open in IMG/M
3300031681|Ga0318572_10656551Not Available625Open in IMG/M
3300031682|Ga0318560_10098216All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1512Open in IMG/M
3300031713|Ga0318496_10454378Not Available708Open in IMG/M
3300031719|Ga0306917_11049912Not Available635Open in IMG/M
3300031724|Ga0318500_10516445Not Available601Open in IMG/M
3300031736|Ga0318501_10132686Not Available1269Open in IMG/M
3300031748|Ga0318492_10491715Not Available650Open in IMG/M
3300031768|Ga0318509_10811474Not Available517Open in IMG/M
3300031771|Ga0318546_10105447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1855Open in IMG/M
3300031771|Ga0318546_10954456Not Available603Open in IMG/M
3300031796|Ga0318576_10558247Not Available540Open in IMG/M
3300031797|Ga0318550_10101162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1359Open in IMG/M
3300031798|Ga0318523_10049814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1965Open in IMG/M
3300031805|Ga0318497_10329683All Organisms → cellular organisms → Bacteria → Terrabacteria group851Open in IMG/M
3300031860|Ga0318495_10089823Not Available1378Open in IMG/M
3300031879|Ga0306919_11297610Not Available551Open in IMG/M
3300031880|Ga0318544_10406852Not Available529Open in IMG/M
3300031890|Ga0306925_10435616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1402Open in IMG/M
3300031896|Ga0318551_10359537All Organisms → cellular organisms → Bacteria → Terrabacteria group825Open in IMG/M
3300031912|Ga0306921_10307306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1856Open in IMG/M
3300031938|Ga0308175_101030403All Organisms → cellular organisms → Bacteria → Terrabacteria group910Open in IMG/M
3300032001|Ga0306922_11507380All Organisms → cellular organisms → Bacteria → Terrabacteria group672Open in IMG/M
3300032008|Ga0318562_10899317Not Available505Open in IMG/M
3300032041|Ga0318549_10205266All Organisms → cellular organisms → Bacteria → Terrabacteria group885Open in IMG/M
3300032044|Ga0318558_10109647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1300Open in IMG/M
3300032059|Ga0318533_10627333All Organisms → cellular organisms → Bacteria → Terrabacteria group789Open in IMG/M
3300032063|Ga0318504_10448917Not Available616Open in IMG/M
3300032068|Ga0318553_10513056Not Available628Open in IMG/M
3300032089|Ga0318525_10383636Not Available720Open in IMG/M
3300032090|Ga0318518_10445540Not Available663Open in IMG/M
3300032091|Ga0318577_10421247Not Available638Open in IMG/M
3300032261|Ga0306920_101965096All Organisms → cellular organisms → Bacteria → Terrabacteria group820Open in IMG/M
3300032770|Ga0335085_10936285Not Available941Open in IMG/M
3300032892|Ga0335081_10155264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3262Open in IMG/M
3300032954|Ga0335083_10439941Not Available1104Open in IMG/M
3300033289|Ga0310914_11856161Not Available507Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil37.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.95%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.97%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.99%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.99%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.99%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559006Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembledEnvironmentalOpen in IMG/M
3300001991Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024251Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026920Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)EnvironmentalOpen in IMG/M
3300027119Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027401Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)EnvironmentalOpen in IMG/M
3300027517Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027576Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FI_009033002166559006Grass SoilMTVTAIQAVTARPRLAPYTAASGDMVLPGCYGVSRGQAIPAT
JGI24743J22301_1015103023300001991Corn, Switchgrass And Miscanthus RhizosphereMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPRPGHAFIYIGNG
Ga0062593_10166850813300004114SoilMTVTAIPPRTTRPRLAPYTAASGDMILPGCYGISRGQGITGDLIR
Ga0062595_10117376713300004479SoilMTVTAIRPVTARPRLAPYTAASGDMVRPGCYGVSRGQGITGDLIRHATGPRPGHAFI
Ga0066815_1004395423300005164SoilMTVTAIPPRTARPRLAPYPAASGDMVLPGCYGVSRGQGITGELIRHASGPR
Ga0066674_1043619913300005166SoilMTITAIPARAGRPRLAPYTAASGDMVLPGCYGVSRGRSITGDLIRHATGPRPGHAFIYIGNGRI
Ga0066683_1080383413300005172SoilMTVTAIPPRTARPRLAPYTTASGDRVLPGCYGISRGQGITGELIRHA
Ga0066676_1101821613300005186SoilMTVTAIPVLPAGARPAPYTAANGDRVLPGCYGISRGLGITGDLIRPATGSRPGHAFIYIG
Ga0070705_10028960713300005440Corn, Switchgrass And Miscanthus RhizosphereMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGD
Ga0070697_10002442983300005536Corn, Switchgrass And Miscanthus RhizosphereMTVTAIRPVTARPRLAPYTAASGDMVRPGCYGVSRGQGITGDLIRHPT
Ga0070695_10050183013300005545Corn, Switchgrass And Miscanthus RhizosphereMTVTAIQAVTARPRLAPYTAASGDIVLPGCYGISRGQAITGDLIRHPTGPRPGHAFIY
Ga0066695_1058463123300005553SoilMTVTAIPPRTARPRLAPYTTASGDMILPGCYGVSRGQGITGDLIRHA
Ga0066707_1029744823300005556SoilMTVTAIRTVTARPRLAPYTTASGDMVRPGCYGVSRGQ
Ga0066696_1059798113300006032SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHATGPRPGHAFIYVGNGRIVEVA
Ga0070715_1045459513300006163Corn, Switchgrass And Miscanthus RhizosphereMTVTAIPVLSAGARLAPYTAANGDRVLPGCYGISRGLGITGDLIRPATGSRPGHAFIYI
Ga0074060_1201934713300006604SoilMTVTAIPPRTARPRLAPYPAASGDMVLPGCYGVSRGQGITGELIRHASGPRPGHAFIYIGNGR
Ga0079221_1058341223300006804Agricultural SoilMTVTAIPAAAVRARLAPYTAANGDTVLPGCYGVSRGEGITGDLIRHASGPRPGHAFIYIGNGRIVE
Ga0079219_1184791913300006954Agricultural SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRPAAGPRPGHAFIYIGNGRIVEVAP
Ga0126373_1313044623300010048Tropical Forest SoilMTVTAIPAVTARPRLAPYPAASGEMVLPGCYGVSR
Ga0137363_1139345623300012202Vadose Zone SoilMTVTAIQAVTARPRLAPYTAASGDIVLPGCYGISRGQAITGDLIRHPTGPRP
Ga0137399_1107445323300012203Vadose Zone SoilMTVTAIQAVTARPRLAPYTAASGDIVLPGCYGISRGQAITGDLIRHPTGP
Ga0137378_1014225333300012210Vadose Zone SoilMTVTAIPVAAARPRLAPYTAANGDKVLPGCYGISRGGAITGDLIRH
Ga0137370_1030964713300012285Vadose Zone SoilMTVTAIPPMTARPRLAPYTAASGDMVRPGCYGVSRGQGITGDLIRHPTGPRPGHA
Ga0137386_1044884033300012351Vadose Zone SoilMTVTAIPVVAARPRLAPYTAASGDIVLPGCYGISRGQAITGDLIRHPTGPRPGHAFIYVG
Ga0137366_1112039123300012354Vadose Zone SoilMSVTAIPVLPARARLSPHTAANGDRVLPGCYGVSRGVGITGDLI
Ga0157341_102221623300012494Arabidopsis RhizosphereMTVTAIPPRTARPRLAPYTAASGDRVLPGCYGVSRGQGITGELIRHATGPRPGHAFIYIGNG
Ga0164303_1062119023300012957SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRPAAGPRPGHA
Ga0164309_1125845123300012984SoilMTVTAIQAVTARPRLAPYTGASGDIVLPGCYGVSRGQAITGDLIRH
Ga0134079_1009853023300014166Grasslands SoilMTVTAIPARAAIPARAVRPRLAPFAAASGDMVLPG
Ga0132256_10184245613300015372Arabidopsis RhizosphereMTVTAIPVVTARPRLAPYTASSGNLVLPGCYGVSRGEGITGDLIRHASGARPGHAFIYIGNG
Ga0182036_1097682923300016270SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRSEGITGDLIR
Ga0182032_1099799523300016357SoilMTVTAIPAMTARPRLAPYAAASGDMVLPGCYGVSRGEGITGDLIRHASGARPGHAFIYI
Ga0187776_1154332923300017966Tropical PeatlandMTVTAIPAVTARPRLAPYTAASGDLVLPGCYGVSRGEGIT
Ga0193730_106671223300020002SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRG
Ga0210407_1012901333300020579SoilMTVTAIQAVTARPRLAPYTAASGDIVLPGCYGISRG
Ga0210395_1015338813300020582SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLI
Ga0210408_1015254033300021178SoilMTVTAIQAVTARPRLAPYTAASGDIVLPGCYGVSRG
Ga0210396_1125061913300021180SoilMTVTAIQAVTARPRLAPYTAASGDIVLPGCYGVSRGQAITGDLIRHATGSRPSH
Ga0210387_1089347023300021405SoilMTVTAIPAVIARPRLAPYAAASGDMVLPGCYGVSRG
Ga0210387_1189593213300021405SoilMTVTAIQAVTARPRLAPYTAASGDIVLSGCYGVSRGQAIT
Ga0210410_1072275523300021479SoilMTVTAIQAVTARPTLAPYTAASGDIVLPGCYGVSRGQA
Ga0126371_1242542823300021560Tropical Forest SoilMTVTVIPAVTARPRLAPYPTASGDLVLPGCYGVSRGEGITGDLIRHA
Ga0247679_104496023300024251SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPRPGHAF
Ga0207697_1041942513300025315Corn, Switchgrass And Miscanthus RhizosphereMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPRPGHAFI
Ga0207642_1033367913300025899Miscanthus RhizosphereMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISR
Ga0207654_1023955223300025911Corn RhizosphereMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPRPGHAFIY
Ga0207660_1039285713300025917Corn RhizosphereMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPRPGHAFIYIG
Ga0207700_1000468913300025928Corn, Switchgrass And Miscanthus RhizosphereMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPR
Ga0207639_1106964113300026041Corn RhizosphereMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPRPGH
Ga0257159_104584323300026494SoilMTVTAFPARAPRPRLAPHTAASGDIVLPGCYGVSRGQGITGDLIRHA
Ga0209378_127080223300026528SoilMTITAIPARAGRPRLAPYTAASGDMVLPGCYGVSRGRSITGDLIRHATGPRPGHAFI
Ga0209156_1012837613300026547SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRPAAGPRPGHAFIYIG
Ga0208575_102474623300026920SoilMTVTAIRPVTARPRLAPYTAASGDMVRPGCYGVSRGQGITGDLIRHPTGPRPGH
Ga0209522_100834823300027119Forest SoilMTVTAIPVVTARPRLAPYTASSGNLVLPGCYGVSRGEGITGDLIRHAPGARPGHAFIYIG
Ga0208637_101075713300027401SoilMTVTAIPPRTARPRLAPYPAASGDMVLPGCYGVSRGQGITGELIRHASGPRPGHAFIYIGNG
Ga0209113_104195423300027517Forest SoilMTITAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDL
Ga0209003_103823813300027576Forest SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAG
Ga0209178_123557023300027725Agricultural SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGISRGQ
Ga0209178_138328513300027725Agricultural SoilMTVTAIQAVTARPRLAPYTAASGDIVLPGCYGISRGQAITGDLIRHPTGPRPGHAFIYVG
Ga0209074_1035028013300027787Agricultural SoilMTVTAMQAVTARPRLAPYTAASGDIVLPGCYGVSRGQAITGDLIRHPTGPRPGHAFIYVGNGRIVEVA
Ga0307311_1005109323300028716SoilMTVTAIPPRIARPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPRPGHAFIYIG
Ga0307495_1025995613300031199SoilMTVTAIPPRTARPRLAPYTAASGDMVLPGCYGVSRGQGITGELIRHATGPRPGHAFIYIGNGRIVE
Ga0318571_1017080023300031549SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRGEGITGDLIRHATGERPGHAF
Ga0318542_1026413823300031668SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRSEGITGDLIRHATGERPGHA
Ga0318574_1046372413300031680SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHAPGVRPGHAF
Ga0318572_1065655123300031681SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHAS
Ga0318560_1009821613300031682SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRGEGITGDLIRHASGERPGHAFIYIGNG
Ga0318496_1045437813300031713SoilMTVTAIPAVAVRARLAPYTAANGDMVLPGCYGISRGEGITGDLIRHASGPRPGHAF
Ga0306917_1104991223300031719SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHA
Ga0318500_1051644523300031724SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRSEGITGDLIRHATG
Ga0318501_1013268623300031736SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRGEGITGDLIRHASGARPGHAFIYIGNGR
Ga0318492_1049171513300031748SoilMTVTAIPALTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHAPGVR
Ga0318509_1081147413300031768SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHAPGVRPGHAFIYIGNGRI
Ga0318546_1010544733300031771SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRSEGITGDLIRHATGERPGHAFIYIG
Ga0318546_1095445623300031771SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRGEGITGDLIRHASGARPGHAF
Ga0318576_1055824713300031796SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRGEGITGDLIRHAS
Ga0318550_1010116213300031797SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRGEGITGDLIRHASGARSGHA
Ga0318523_1004981433300031798SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRGEGITGDLIRHA
Ga0318497_1032968313300031805SoilMTVTAIQAVTARPRLAPYTAASGDLVLPGCYGVSRGEGITGDLIRHAPGARPGHA
Ga0318495_1008982333300031860SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRGEGITGDLIRHASGAR
Ga0306919_1129761023300031879SoilMTVTAIPAMIARPRLAPYAAASGDMVLPGCYGVSRGEGITGDLIRHASGARPGHSFIYVGNGRIVE
Ga0318544_1040685213300031880SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRGEGITGDLIRHAPGVRPGHAFIYIGNGRIVEVA
Ga0306925_1043561613300031890SoilMTVTAIPAVTARPRLAPYTAASGDLVRPGCYGVSRG
Ga0318551_1035953723300031896SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHAPGVR
Ga0306921_1030730633300031912SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHARGVRPGHAFIYIGNGRI
Ga0308175_10103040323300031938SoilMTVTAIPPRTTRPRLAPYTAASGDMVLPGCYGISRGQGITGDLIRHAAGPRPGHAFIYIGNGRIVEVV
Ga0306922_1150738013300032001SoilMTVTAIPALTARPRLAPYTAASGDMVLPGCYGVSRGERITGDLIRHAPGV
Ga0318562_1089931723300032008SoilMTVTAIPAVAVRARLAPYTAANGDMVLPGCYGISRGVR
Ga0318549_1020526623300032041SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRSEGITGDLIRHATGERPGHAFI
Ga0318558_1010964733300032044SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGD
Ga0318533_1062733323300032059SoilMTVTAIPAVTARPRLAPYAAASGDMVLPGCYGVSRSEGITGDLIRHATGERPGHAFIYIGNGRIVE
Ga0318504_1044891713300032063SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRGEAITGDLIRHAS
Ga0318553_1051305623300032068SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHAPGV
Ga0318525_1038363613300032089SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRSEGITGDLIRHA
Ga0318518_1044554013300032090SoilMTVTAIPAMTARPRLAPYTAASGDMVLPGCYGVSRGEGITGDLIRHAPGVRPGHAFIYIG
Ga0318577_1042124713300032091SoilMTVTAMSAVTARPRLAPYAAASGDMVLPGCYGVSRSEGITGDLIRHATGE
Ga0306920_10196509613300032261SoilMTVTAIPAVAVRARLAPYTAANGDMVLPGCYGISRGEGITGD
Ga0335085_1093628513300032770SoilMTVTAIPAVTARPRLAPYTAASGDMVLPGCYGVSRGASITGDLIRHAPGERPGHAFIYIG
Ga0335081_1015526453300032892SoilMTVTAIPAVTARPRLAPYTAASGDLVLPGCYGVSRGEGITGDLIRHPPGARPGHAF
Ga0335083_1043994123300032954SoilMTVTAIPAMTARPRLAPYVAASGDMVPPGCYGVSRGEGITGDLIRHASG
Ga0310914_1185616123300033289SoilMTVTAIQAVTARPRLAPYTAASGDLVLPGCYGVSRGEGITGDLIRHASGARPGHAFIY


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