Metagenome Family F103951

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103951
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	66 residues
Representative Sequence	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDSATEKA
Number of Associated Samples	83
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.00 %
% of genes near scaffold ends (potentially truncated)	18.81 %
% of genes from short scaffolds (< 2000 bps)	68.32 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (11.881 % of family members)
Environment Ontology (ENVO)	Unclassified (20.792 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.584 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.58% β-sheet: 0.00% Coil/Unstructured: 82.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02545	Maf	23.76
PF01243	Putative_PNPOx	16.83
PF02776	TPP_enzyme_N	6.93
PF01207	Dus	6.93
PF13439	Glyco_transf_4	3.96
PF16864	Dimerisation2	2.97
PF01471	PG_binding_1	1.98
PF01476	LysM	0.99
PF00578	AhpC-TSA	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	23.76
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	6.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.61 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.98 %
Unclassified	root	N/A	1.98 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.99 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	38.61 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.98 %
Unclassified	root	N/A	1.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	38.61 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.98 %
Unclassified	root	N/A	1.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	18.81 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.98 %
Unclassified	root	N/A	1.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	18.81 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.98 %
Unclassified	root	N/A	1.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	18.81 %
Unclassified	root	N/A	1.98 %
Nitrospira defluvii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	0.99 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17273734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1886	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig62764	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	984	Open in IMG/M
2170459012\|GOYVCMS01CTTQM	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
2209111006\|2214777192	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
2228664022\|INPgaii200_c1014385	All Organisms → cellular organisms → Bacteria	4016	Open in IMG/M
3300000559\|F14TC_100266243	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1000828	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300000789\|JGI1027J11758_12754970	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10005286	All Organisms → cellular organisms → Bacteria	2996	Open in IMG/M
3300002090\|JGI24806J26614_1005147	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300003911\|JGI25405J52794_10001473	All Organisms → cellular organisms → Bacteria	3879	Open in IMG/M
3300004267\|Ga0066396_10034557	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300004633\|Ga0066395_10371055	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005162\|Ga0066814_10059290	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005169\|Ga0066810_10096065	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005178\|Ga0066688_10896427	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005186\|Ga0066676_10240244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1179	Open in IMG/M
3300005289\|Ga0065704_10115518	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1871	Open in IMG/M
3300005289\|Ga0065704_10140854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1502	Open in IMG/M
3300005294\|Ga0065705_10006690	All Organisms → cellular organisms → Bacteria	4474	Open in IMG/M
3300005332\|Ga0066388_100014596	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	6450	Open in IMG/M
3300005332\|Ga0066388_101704640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1115	Open in IMG/M
3300005445\|Ga0070708_100443634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1224	Open in IMG/M
3300005507\|Ga0074259_10104786	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005555\|Ga0066692_10460581	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300005559\|Ga0066700_10187864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1422	Open in IMG/M
3300005713\|Ga0066905_102057575	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005937\|Ga0081455_10027814	All Organisms → cellular organisms → Bacteria	5178	Open in IMG/M
3300005937\|Ga0081455_10035233	All Organisms → cellular organisms → Bacteria	4475	Open in IMG/M
3300005981\|Ga0081538_10004560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	12749	Open in IMG/M
3300006049\|Ga0075417_10051447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1779	Open in IMG/M
3300006163\|Ga0070715_10558970	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006797\|Ga0066659_11565491	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006847\|Ga0075431_100040644	All Organisms → cellular organisms → Bacteria	4793	Open in IMG/M
3300006852\|Ga0075433_10755066	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300007076\|Ga0075435_101409954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300009012\|Ga0066710_100120401	All Organisms → cellular organisms → Bacteria	3573	Open in IMG/M
3300009081\|Ga0105098_10026386	Not Available	2257	Open in IMG/M
3300009081\|Ga0105098_10059272	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1577	Open in IMG/M
3300009137\|Ga0066709_103970576	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300009157\|Ga0105092_10001983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10903	Open in IMG/M
3300009157\|Ga0105092_10045321	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2354	Open in IMG/M
3300009157\|Ga0105092_10049870	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300009157\|Ga0105092_10069363	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1908	Open in IMG/M
3300009157\|Ga0105092_10089050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1685	Open in IMG/M
3300009162\|Ga0075423_10171005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2281	Open in IMG/M
3300009168\|Ga0105104_10608924	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300009168\|Ga0105104_10889739	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009610\|Ga0105340_1347675	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009792\|Ga0126374_10296157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1082	Open in IMG/M
3300009804\|Ga0105063_1018862	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300009811\|Ga0105084_1001191	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2871	Open in IMG/M
3300010043\|Ga0126380_10087651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1826	Open in IMG/M
3300010043\|Ga0126380_10130020	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300010043\|Ga0126380_10253081	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300010046\|Ga0126384_10258531	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300010047\|Ga0126382_10599391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	906	Open in IMG/M
3300010047\|Ga0126382_11243874	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300010362\|Ga0126377_10436860	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300010362\|Ga0126377_10997745	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300011398\|Ga0137348_1088414	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012199\|Ga0137383_10132112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1823	Open in IMG/M
3300012685\|Ga0137397_10048901	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300012685\|Ga0137397_10625074	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300012922\|Ga0137394_10730636	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	832	Open in IMG/M
3300012930\|Ga0137407_11358812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	675	Open in IMG/M
3300012948\|Ga0126375_10293756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1124	Open in IMG/M
3300012957\|Ga0164303_10302339	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300012971\|Ga0126369_10377807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1448	Open in IMG/M
3300014320\|Ga0075342_1269378	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300015245\|Ga0137409_10608963	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300017966\|Ga0187776_10467347	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300018028\|Ga0184608_10015697	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2669	Open in IMG/M
3300018052\|Ga0184638_1018854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2425	Open in IMG/M
3300018053\|Ga0184626_10004471	All Organisms → cellular organisms → Bacteria	5258	Open in IMG/M
3300018053\|Ga0184626_10112990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1152	Open in IMG/M
3300018072\|Ga0184635_10137933	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300018073\|Ga0184624_10201149	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300018076\|Ga0184609_10183754	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300018078\|Ga0184612_10003222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8062	Open in IMG/M
3300018081\|Ga0184625_10008665	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	4643	Open in IMG/M
3300022756\|Ga0222622_10070976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2049	Open in IMG/M
3300027006\|Ga0209896_1008403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1096	Open in IMG/M
3300027056\|Ga0209879_1001072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3559	Open in IMG/M
3300027646\|Ga0209466_1000111	All Organisms → cellular organisms → Bacteria	17867	Open in IMG/M
3300027722\|Ga0209819_10000567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10867	Open in IMG/M
3300027722\|Ga0209819_10006413	All Organisms → cellular organisms → Bacteria	3769	Open in IMG/M
3300027722\|Ga0209819_10225121	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300027874\|Ga0209465_10250752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	886	Open in IMG/M
3300028587\|Ga0247828_10935826	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031719\|Ga0306917_10217280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1454	Open in IMG/M
3300031720\|Ga0307469_10953738	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300031820\|Ga0307473_10091626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1591	Open in IMG/M
3300031879\|Ga0306919_10528662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	910	Open in IMG/M
3300031890\|Ga0306925_10527447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1255	Open in IMG/M
3300033408\|Ga0316605_12100329	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300033413\|Ga0316603_11369804	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300034115\|Ga0364945_0000109	All Organisms → cellular organisms → Bacteria	20257	Open in IMG/M
3300034149\|Ga0364929_0001238	All Organisms → cellular organisms → Bacteria	5783	Open in IMG/M
3300034819\|Ga0373958_0182911	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.14%
Host-Associated	Host-Associated	13.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.38%
Aquatic	Environmental → Aquatic	23.76%
Plants	Host-Associated → Plants	13.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.40%
Freshwater	Environmental → Aquatic → Freshwater	11.88%
Sediment	Environmental → Aquatic → Sediment	11.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.94%
Floodplain	Environmental → Terrestrial → Floodplain	1.98%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.58%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.88%
Loam	Environmental → Terrestrial → Soil → Loam	10.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.96%
Sand	Environmental → Terrestrial → Soil → Sand	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	11.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.95%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.99%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00670140	2088090014	Soil	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDSATEKA
KansclcFeb2_12551550	2124908045	Soil	MKPREFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAIEAKPSGATEK
N56_08698940	2170459012	Grass Soil	WPEKTWFRERLNALRAREHEAHRKAAIPTSKNTLVVDAKPTGDSAAEKS
2213798767	2209111006	Arabidopsis Rhizosphere	MKAPEFDPNSDRNWAWPEKTWFRERLNALRAREQEAHRKPVSNQKESVAMESKGNGNGDRGTEKG
INPgaii200_10143854	2228664022	Soil	LLSHPQNVMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDSATEKA
F14TC_1002662432	3300000559	Soil	LLNHAQNVMKPREFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKLATNQKESVATEAKPSGATEKA*
KanNP_Total_noBrdU_T14TCDRAFT_10008285	3300000596	Soil	LLSHPQIVMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHETRKPAGNQKQSVAMEAKPSGDSGTEKA*
JGI1027J11758_127549702	3300000789	Soil	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPVIAPKDTLAVGAKPTGDPAAEKS*
AF_2010_repII_A001DRAFT_100052863	3300000793	Forest Soil	MAWSLLSPSHIAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMETKPSDDSGTEKV*
JGI24806J26614_10051474	3300002090	Soil	MKPPEFDPNSDRNWAWPEKTWFRERLIALRAREHETRKPAGNQKQSVAMESKPSGDSGTEKA*
JGI25405J52794_100014733	3300003911	Tabebuia Heterophylla Rhizosphere	MKPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPATRQKESVAIETKPSDDSGTEKV*
Ga0066396_100345572	3300004267	Tropical Forest Soil	MKPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMESKPSDDSGTEKV*
Ga0066395_103710552	3300004633	Tropical Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMETKPSDDSGTEKV*
Ga0066814_100592902	3300005162	Soil	LLSHPQIAMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDSATEKA*
Ga0066810_100960651	3300005169	Soil	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKGSVAMEGKPSGDPVTEKA*
Ga0066688_108964272	3300005178	Soil	GIWHSDCSIMPQVAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPVITPKDTLAVGAKPTGDPAAEKS*
Ga0066676_102402442	3300005186	Soil	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDSATEKA*
Ga0065704_101155184	3300005289	Switchgrass Rhizosphere	MKPPQFDPNSDNWAWPEKTWFQERLNAMRARKHEAHRKPATNQKEPVAVETKNSGDPG
Ga0065704_101408542	3300005289	Switchgrass Rhizosphere	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHETRKPAGNQKQSVAMESKPSGDSGTEKA*
Ga0065705_100066906	3300005294	Switchgrass Rhizosphere	LLSHPQIVMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHETRKPAGNQKQSVAMESKPSGDSGTEKA*
Ga0065705_109245612	3300005294	Switchgrass Rhizosphere	MKPPEFEPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNRKESVAME
Ga0066388_1000145968	3300005332	Tropical Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPGSSQKESVAMEAKPSDNSGTEKV*
Ga0066388_1017046401	3300005332	Tropical Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPATSQKESVAMEAKGSDDSGTEKV*
Ga0070708_1004436342	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPVITPKDTLAVGAKPTGDPAAEKS*
Ga0074259_101047862	3300005507	Arabidopsis Rhizosphere	MKAPEFDPNSDRNWAWPEKTWFRERLNALRAREQEAHRKPVSNQKESVAMESKGNGNGDRGTEKG*
Ga0066692_104605813	3300005555	Soil	GNSEQGIWHSDCSIMPQVAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPVITPKDTLAVGAKTTGDPAAEKS*
Ga0066700_101878643	3300005559	Soil	MPQVAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPVITPKDTLAVGAKPTGDPAAEKS*
Ga0066905_1020575752	3300005713	Tropical Forest Soil	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHETRKPASNQKQSVAMESKPSGDSGTEKA*
Ga0081455_100278144	3300005937	Tabebuia Heterophylla Rhizosphere	MKPSDFDPNTDRNWAWPEKTWFRERLNALRARAHETHRKPANLQKEVGAVETKPNGDRGTEKI*
Ga0081455_100352333	3300005937	Tabebuia Heterophylla Rhizosphere	MKPSDFDPNSDRNWAWPEKTWFRERLNALRAREHETHRKPANNQKDPEAVEAKPNGDPETKKT*
Ga0081538_1000456012	3300005981	Tabebuia Heterophylla Rhizosphere	VHGIVIAQACSGIEMKPSDFDPNTDHNWAWPEKTWFRERLNALRAREHETQRKPAKKEPVAVEAKPNGAPGTEKT*
Ga0075417_100514471	3300006049	Populus Rhizosphere	MKPREFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAIEAKPSGATEKA*
Ga0070715_105589702	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPVITPKDTLAVEAKPTGDPAAEKS*
Ga0066659_115654911	3300006797	Soil	RNWAWPEKTWFRERLNALRAREHEAHRKPVITPKDTLAVRAKPTGDPAAEKS*
Ga0075431_1000406442	3300006847	Populus Rhizosphere	LLNHPQNVMKPREFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAIEAKPSGATEKA*
Ga0075433_107550661	3300006852	Populus Rhizosphere	LLSHPQNVMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDSATEKA*
Ga0075435_1014099542	3300007076	Populus Rhizosphere	EFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDSATEKA*
Ga0066710_1001204011	3300009012	Grasslands Soil	MKPPEFEPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPTNNQKASVAIEAKPSGDLGTEKA
Ga0105098_100263863	3300009081	Freshwater Sediment	IEMKPSDFDPNSDGNWAWPEKTWFRERLNALRAREHETHKKPVNNQKQPGAVEAKPHGDPGTEKA*
Ga0105098_100592722	3300009081	Freshwater Sediment	MLIAQPCSGIAMKSPDFDPNSDRNWAWPEKTWFRERLNALRAREHETHRKPANNQKEPAAVEAKPNGDPGTEKA*
Ga0066709_1039705761	3300009137	Grasslands Soil	LLNNPHIAMKPPEFEPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPTNNQKASVAIEAKPSGDLGTEKA*
Ga0105092_100019835	3300009157	Freshwater Sediment	MVIAAPCSGIEMKPSDFDPNSDGNWAWPEKTWFRERLNALRAREHETHKKPVNNQKQPGAVEAKPHGDPGTEKA*
Ga0105092_100453213	3300009157	Freshwater Sediment	MVIAAPCSEIEMKPSDFDPNSDRNWAWPEKTWFRERLNALRAREHETHKKPVINQKQPGAVEAKPHGDPGTEKA*
Ga0105092_100498702	3300009157	Freshwater Sediment	MLIAQPCSGIAMKSPDFDPNNDRNWAWPEKTWFRERLNALRAREHETHRKPANNQKEPAAVEAKPNGDPGTEKA*
Ga0105092_100693632	3300009157	Freshwater Sediment	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHETRKPVANQKQSVAMEAKPSGDSETEKA*
Ga0105092_100890502	3300009157	Freshwater Sediment	DFDPNSDRNWAWPEKTWFRERLNALRAREHETHRKPANNQKDQEAVEAKPNGDPGTKKT*
Ga0075423_101710052	3300009162	Populus Rhizosphere	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKEVVAMEAKPSGDSATEKA*
Ga0105104_106089241	3300009168	Freshwater Sediment	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGGPGTEKA*
Ga0105104_108897391	3300009168	Freshwater Sediment	MPQIAMKPPEFDPNSDRNWTWPEKTWFRERLNALRAREHETRKPVANQKQSVAMEAKPSGDSETEKA*
Ga0105340_13476751	3300009610	Soil	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGGPATEKA*
Ga0126374_102961572	3300009792	Tropical Forest Soil	LEFHTRYMAWSLLSPSHIAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMETKPSDDSGTEKV*
Ga0105063_10188622	3300009804	Groundwater Sand	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPTNNQKASVAIEAKPSGDLGTEKA*
Ga0105084_10011913	3300009811	Groundwater Sand	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPTNNQKASVAIEAKHSGDLGTEKA*
Ga0126380_100876513	3300010043	Tropical Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLHALRAREHEAHRKPATSQKESVAMETKSSDDSATEKV*
Ga0126380_101300201	3300010043	Tropical Forest Soil	MAWSLLSPSHIAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMETKPSDD
Ga0126380_102530811	3300010043	Tropical Forest Soil	PSHIAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMETKPSDDSGTEKV*
Ga0126384_102585311	3300010046	Tropical Forest Soil	MAWSLLSPSHIAMKPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMETKPSDDSGTEKV*
Ga0126382_105993912	3300010047	Tropical Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLHALRAREHESHRKPATGQKESVAMETKPSDDSGTEK
Ga0126382_112438741	3300010047	Tropical Forest Soil	MAWSLLSPSHIAMKPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPATRQKESVAIETKPSDDSGTEKV*
Ga0126377_104368602	3300010362	Tropical Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLHALRAREHEAHRKPATSQKESVAMETKPSDDSGTEKV*
Ga0126377_109977452	3300010362	Tropical Forest Soil	DRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVGMEAKPSGESGSENI*
Ga0137348_10884141	3300011398	Soil	MKSPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDPATEKA*
Ga0137383_101321123	3300012199	Vadose Zone Soil	MKPPEFEPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPTNNQKASVAIEAKPSGDLGTEKA*
Ga0137397_100489012	3300012685	Vadose Zone Soil	MKPLEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAIEAKPSGDPITEKA*
Ga0137397_106250743	3300012685	Vadose Zone Soil	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATDQKESVAMEAKPSG
Ga0137394_107306362	3300012922	Vadose Zone Soil	MKPPEFEPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPTNNQKASVAIEAKP
Ga0137407_113588122	3300012930	Vadose Zone Soil	LNHPQNVMKPLEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAIEAKPSGDPITEKA*
Ga0126375_102937561	3300012948	Tropical Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHESHRKPATGQKESVAMETKPSDDSGTEKV*
Ga0164303_103023391	3300012957	Soil	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPAANQKESVAMEAKPSGDSATEKA*
Ga0126369_103778072	3300012971	Tropical Forest Soil	MAWSLLSPSHIAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMESKPSDDSGTEKV*
Ga0075342_12693781	3300014320	Natural And Restored Wetlands	MKPPEFDPNPDRNWAWPEKTWFRERLNALRAREHEAHRKPVTNQKEAVAMETK
Ga0137409_106089631	3300015245	Vadose Zone Soil	MKPLEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDSATEKA*
Ga0187776_104673471	3300017966	Tropical Peatland	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPMNHPKDTRAVEGKPTDEPGTEKS
Ga0184608_100156973	3300018028	Groundwater Sediment	LLNHPQNVMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSSDPATEKA
Ga0184638_10188542	3300018052	Groundwater Sediment	LLSHPQNVMKPPEFDPNSDHNWAWPQKTWFRERLNALRAREHEAHRKPATNQKESVAMEGKPGGGDPATEKA
Ga0184626_100044713	3300018053	Groundwater Sediment	LLSHPQNVMKPPEFDPNSDHNWAWPQKTWFRERLNALRAREHEAHRKPATNQKESVAMEGKPGGGHPATEKA
Ga0184626_101129902	3300018053	Groundwater Sediment	LLNHPQNVMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDPATEKA
Ga0184635_101379331	3300018072	Groundwater Sediment	LLSHPQIAMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPGGDPATEKA
Ga0184624_102011492	3300018073	Groundwater Sediment	LLSHPQIAMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGGPATEKA
Ga0184609_101837542	3300018076	Groundwater Sediment	LLNHPQNAMKPPEFEPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSSDPATEKA
Ga0184612_100032224	3300018078	Groundwater Sediment	MKPPEFDPNSDHNWAWPQKTWFRERLNALRAREHEAHRKPATNQKESVAMEGKPGGGHPATEKA
Ga0184625_100086651	3300018081	Groundwater Sediment	MKPLEFDPNSDRNWAWPQKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPGGDPATEKA
Ga0222622_100709762	3300022756	Groundwater Sediment	LLNHPQNVMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEGKPGGGDPATEKA
Ga0209896_10084032	3300027006	Groundwater Sand	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPTNNQKASVAIEAKPSGDLGTEKA
Ga0209879_10010724	3300027056	Groundwater Sand	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPTNNQKASVAIEAKHSGDLGTEKA
Ga0209466_100011118	3300027646	Tropical Forest Soil	MAWSLLSPSHIAMKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMETKPSDDSGTEKV
Ga0209819_100005674	3300027722	Freshwater Sediment	MVIAAPCSGIEMKPSDFDPNSDGNWAWPEKTWFRERLNALRAREHETHKKPVNNQKQPGAVEAKPHGDPGTEKA
Ga0209819_100064132	3300027722	Freshwater Sediment	MLIAQPCSGIAMKSPDFDPNNDRNWAWPEKTWFRERLNALRAREHETHRKPANNQKEPAAVEAKPNGDPGTEKA
Ga0209819_102251212	3300027722	Freshwater Sediment	MVIAAPCSEIEMKPSDFDPNSDRNWAWPEKTWFRERLNALRAREHETHKKPVINQKQPGAVEAKPHGDPGTEKA
Ga0209465_102507522	3300027874	Tropical Forest Soil	MAWSLLSPSHIAMKPEFDPNADRNWAWPEKTWFRERLNALRAREHEAQRKPVTNRKESVAMETKPSDDSGTEKV
Ga0247828_109358261	3300028587	Soil	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHETRKPAGNQKQSVAMESKPSGDSGTEKA
Ga0306917_102172803	3300031719	Soil	MKPPEFDPNADRNWAWPEKTWFRERLNTLRAREHEAHRKPAIPTSKDTLAVKAKPTEDSAAEKS
Ga0307469_109537381	3300031720	Hardwood Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPVITPKDTLAVGAKPTGDPAAEKS
Ga0307473_100916262	3300031820	Hardwood Forest Soil	MKPPEFDPNADRNWAWPEKTWFRERLNALRAREHEAHRKPVITAKDTLAVGAKPTGDPAAEKS
Ga0306919_105286621	3300031879	Soil	MKPPEFDPNADRNWAWPEKTWFRERLNTLRAREHEAHRKPAIPTSKDTLAVKAKPTEDSAAE
Ga0306925_105274472	3300031890	Soil	MKPPEFDPNADRNWAWPEKTWFRERLNTLRAREHEAHRKPAIPTSKDTLALKAKPTEDSAAEKS
Ga0316605_121003291	3300033408	Soil	MPQIAMKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDPATEKA
Ga0316603_113698041	3300033413	Soil	MKPPEFEPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGDPATEKA
Ga0364945_0000109_13274_13465	3300034115	Sediment	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGGPATEKA
Ga0364929_0001238_2381_2572	3300034149	Sediment	MKPPEFDPNSDRNWAWPEKTWFRERLNALRAREHEAHRKPATNQKESVAMEAKPSGAPATEKA
Ga0373958_0182911_215_412	3300034819	Rhizosphere Soil	MKAPEFDPNSDRNWAWPEKTWFRERLNALRAREQEAHRKPVSNQKESVAMDSKGNGNGDRGTEKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103951

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences