Metagenome Family F103948

Overview

Basic Information

• Family ID: F103948
• Family Type: Metagenome
• Number of Sequences: 101
• Average Sequence Length: 74 residues
• Representative Sequence: LELANLPRVAKPRVKPRRLSTGEAPLEIARIGSEWRISCTGCGEASPLVQFRWQVLDQTVACLCD
• Number of Associated Samples: 88
• Number of Associated Scaffolds: 101

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 84
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (18.812 % of family members)
• Environment Ontology (ENVO): Unclassified (20.792 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (39.604 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 4.30%
  β-sheet: 15.05%
  Coil/Unstructured: 80.65%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13561	adh_short_C2	8.91
PF01738	DLH	4.95
PF07722	Peptidase_C26	1.98
PF00392	GntR	1.98
PF08327	AHSA1	1.98
PF10011	DUF2254	1.98
PF06305	LapA_dom	0.99
PF04237	YjbR	0.99
PF13416	SBP_bac_8	0.99
PF04909	Amidohydro_2	0.99
PF00990	GGDEF	0.99
PF11716	MDMPI_N	0.99
PF08241	Methyltransf_11	0.99
PF00202	Aminotran_3	0.99
PF02861	Clp_N	0.99
PF00441	Acyl-CoA_dh_1	0.99
PF05960	DUF885	0.99
PF03006	HlyIII	0.99
PF04185	Phosphoesterase	0.99
PF10518	TAT_signal	0.99
PF12833	HTH_18	0.99
PF00672	HAMP	0.99
PF00248	Aldo_ket_red	0.99
PF07987	DUF1775	0.99
PF00563	EAL	0.99
PF01048	PNP_UDP_1	0.99
PF04264	YceI	0.99
PF00041	fn3	0.99
PF07992	Pyr_redox_2	0.99
PF01243	Putative_PNPOx	0.99
PF00903	Glyoxalase	0.99
PF01569	PAP2	0.99
PF04120	Iron_permease	0.99
PF04851	ResIII	0.99
PF00196	GerE	0.99
PF00106	adh_short	0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.99
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.99
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.99
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.99
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.99
COG2315	Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR family	Transcription [K]	0.99
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.99
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.99
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.99
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.99
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.99
COG4549	Uncharacterized conserved protein YcnI, contains cohesin/reeler-like domain	Function unknown [S]	0.99
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.99
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.99
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.99

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.25%
Host-Associated	Host-Associated	24.75%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.40%
Plants	Host-Associated → Plants	24.75%
Aquatic	Environmental → Aquatic	14.85%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.58%
Peat	Environmental → Terrestrial → Peat	18.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.83%
Freshwater	Environmental → Aquatic → Freshwater	5.94%
Sediment	Environmental → Aquatic → Sediment	4.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.95%
Marine	Environmental → Aquatic → Marine	3.96%
Roots	Host-Associated → Plants → Roots	2.97%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	18.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.92%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.95%
Lake	Environmental → Aquatic → Freshwater → Lake	3.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.98%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.99%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	18.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.99%

Habitat

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	18.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.95%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.97%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.99%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental
3300004065	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2	Environmental
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated
3300026007	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2 (SPAdes)	Environmental
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental
3300028651	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2	Environmental
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental
3300029989	III_Fen_N1 coassembly	Environmental
3300029990	I_Fen_N2 coassembly	Environmental
3300030000	I_Fen_N3 coassembly	Environmental
3300030114	I_Fen_E2 coassembly	Environmental
3300030294	II_Fen_E3 coassembly	Environmental
3300030838	I_Fen_N1 coassembly	Environmental
3300030943	III_Fen_N2 coassembly	Environmental
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A10PFW1_106084442	3300001538	Permafrost	LYLEPELPDLPHITKPKILPKRLSTGQMALEIARIGSAWRISCTGCGEASPLVQFRWQVLDQTVECRCG*
C688J35102_1189103213	3300002568	Soil	QSDARHDAAIRMLGPRLPAPAADAAPYVAVELAALPRIVKPRVEPKKLSTGHAPLEIARVGSGWRISCTGCGETSAPVEFRWQVLDQTVTCLCT*
Ga0055465_102694271	3300004013	Natural And Restored Wetlands	LAELPAVRKPKVEPQRLSTGEVALQIARVGTQWRISCTGCGEASPLVDYRWQVLDETVPCRCA*
Ga0055481_102130641	3300004065	Natural And Restored Wetlands	PARDAAPYLELELADLPPITKPRAEPKRLSTGQAPLEIARVGSGWLISCTGCGETSAPVQFRWQVLDQTVACRCE*
Ga0055512_101483191	3300004072	Natural And Restored Wetlands	AASAESGKGQAAPYLEVELAELPEIATPKARAKRLSTGEAPLEIARVGAGWLISCTGCGESSAPVQFRWQVLDQTVACLCD*
Ga0063454_1002239311	3300004081	Soil	AKPKIVPKKLSTGQVALEIARVGDGWRISCTGCGESSPPVEFRWQVLDQTVPCRCN*
Ga0063356_1005672814	3300004463	Arabidopsis Thaliana Rhizosphere	PYLELALSNLPAVAKPRVEPKRLSTGREPLEIARIGSAWRISCTGCGEASPLVEFRWQVLDQTVACRC*
Ga0070661_1014102972	3300005344	Corn Rhizosphere	ELRALDAHLPRATEDAPYLEIEMAELPEIAKPRVEPKRLSTGQAALEISQIGDAWRIRCIGCGEASDPVQFRWQVFDQTVVCRCG*
Ga0070688_1009537112	3300005365	Switchgrass Rhizosphere	KPKVAPKRLSTGEVALEIQRVGDGWRISCTGCGEASPLVQFRWQVLDQTVPCRCD*
Ga0070685_102924132	3300005466	Switchgrass Rhizosphere	PALARLDAQLPAPVADAPYLEVALAEVPEIATPKVQPKRLSTGQAPLEIARIGAEWRISCTGCGEASRLVQYRWQVLDETVPCRCD*
Ga0070686_1008319291	3300005544	Switchgrass Rhizosphere	VSLSNLPRVAKPKVAPKRLSTGEVALEIQRVGDGWRISCTGCGEASPLVQFRWQVLDQTVPCRCD*
Ga0070686_1010913262	3300005544	Switchgrass Rhizosphere	QPPRPEGDAAPYLELALSNLPVIAKPRVEPKRFSTGREPLEIARIGAAWRISCTGCGESSPLVEFRWQVLDQTVACRC*
Ga0066699_109899471	3300005561	Soil	PKVKPKRLSTGHAPLEIARIGSAWRISCTGCGEASALVQFRWQALEESVVCRCE*
Ga0066693_101417092	3300005566	Soil	PYVELELTNLPRITKPRVEPKRLSSGHAPLEIGRVGSGWRISCTGCGEASPLVQFRWELFDQTVACLCN*
Ga0068860_1015963162	3300005843	Switchgrass Rhizosphere	ELQALEPRLPKPADGDATRYLEVSLSNLPRVAKPKVAPKRLSTGEVALEIQRVGDGWRISCTGCGEASPLVQFRWQVLDQTVPCRCD*
Ga0075365_109796772	3300006038	Populus Endosphere	EPALGELEARLPLPDADPPYLEVELTALPEIATPKTRPKRMSTGQAPLEIARIGSAWRISCSGCGESSPPVQFRWQALDQTVVCRCE*
Ga0075023_1003999592	3300006041	Watersheds	PKKAERPYLELALTNLPAIAKPRVEPKRMSTGQAPIEIARIGDAWRISCTGCGEVSPLVQFRWQALDQTVACRCS*
Ga0075028_1006007142	3300006050	Watersheds	PPPRADAPYLERELATLPLIAKPRVKPRPLSTGTAPLEIARVGSEWRISCTGCGESSPTVQFRWQVLDQTVACLCE*
Ga0070715_105961331	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LELQLPKPTEAGPRYLELSLSNLPPVAKPKVAPKRLSTGEVALEIARVGDGWRISCTGCGEASPLVQFRWQVLDQTVPCRCA*
Ga0075018_107286131	3300006172	Watersheds	LSELPRVTKPRVKPKRLSTGQVALEIARIGDAWRISCTGCGEGSPPVQFRWQVLDQTVPCRCA*
Ga0075021_103746151	3300006354	Watersheds	PYLELELAELPEIVKPKIIPKRLSTGQMALEIARVGKAWRISCTGCGEASPIVQFRWQVLDQTVACRCD*
Ga0079222_106708891	3300006755	Agricultural Soil	LPRITKPRVEPKRLSSGHEPLEIARVGSGWRISCTGCGEASPLVQFRWELFDQTVACLCD
Ga0079221_116654851	3300006804	Agricultural Soil	PTDSEPQYLELSLSSLPPVSIPKVVPKRLSTGDVALQIAKVGDGWRISCTGCGEGSPLVQFRWQVMDQTVPCRCD*
Ga0075428_1016954761	3300006844	Populus Rhizosphere	KPRVEPKRLSTGQQALEIARIGERWRISCTGCGEASPLVEFRWQVLDQTVACRCA*
Ga0079219_101643101	3300006954	Agricultural Soil	ELPRPDADAAYLEPELSNLPVVKKPKVEPARHSTGEVALQIARVGSGWRISCTGCGESSRLVQYRWQALDETVPCRCE*
Ga0099829_107544062	3300009038	Vadose Zone Soil	REATLRRLEARLPRAKPDAPYLELELANLPRVAKPRVKPRLLSTGQAPLEIARIGSSWRISCTGCGEASPLVQFRWQVLDQTVTCRCD*
Ga0079224_1015766032	3300009095	Agricultural Soil	VVERELPEGTAPKATPKRLSTGHAPLEIARIGSGWQINCTGCGEASPLVKFRWQALEESVLCRCE*
Ga0105091_104825782	3300009146	Freshwater Sediment	LELLLSNLPPVAIPKVAPKQLSTGEVGLVIARVGDAWRISCTGCGEASPPVRFRWQVLDQTVHCRCG*
Ga0105248_130071941	3300009177	Switchgrass Rhizosphere	PAIAAAPYVEVELAALPRVAKPRVEPRKLSTGHAPLEIARIGSGWRISCTGCGETSAPVEFRWQVLDQTVACLCT*
Ga0137413_118057402	3300012924	Vadose Zone Soil	EPLDLERQLPAPKDAQPYLGPELAELPQIATPKVAPKRFSTGQVALEIARVGDAWRISCTGCGEASPPVKFRWQVLDQTVPCRCA*
Ga0164241_106863892	3300012943	Soil	PAPARDAALERLAPRLPRPEPDDAPYLDIELPELPEIATPTVKPKRLSTGQAPLAITQTASGWRIHCTGCGESSPFVQFRWQALEESVTCRCD*
Ga0164303_105477291	3300012957	Soil	AAIRRLDPRLPRPDDSTPYLAPELAPLPAIAKPRVEPRRLSTGHVPLEIARIGSAWRISCTGCGESSPIVQFRWQVLDQTVKCRCA*
Ga0164309_102458013	3300012984	Soil	PPYLEVALAEVPEIATPKVQPKRLSTGQAPLEIARIGAEWRISCTGCGEASRLVQYRWQVLDETVPCRCD*
Ga0164304_116970352	3300012986	Soil	PVVAKPKVQAKRLSTGQAPLEIARIGSEWRISCTGCGEASRLVRFRWQALEETVACRCD*
Ga0157375_121765492	3300013308	Miscanthus Rhizosphere	KPKVQPKRLSTGQAPLEIARVESAWLISCTGCGESSRLVQFRWQALEETVDCRCE*
Ga0163163_111192101	3300014325	Switchgrass Rhizosphere	DSQLPKATDSVPRYLELSLSNLPIVAKPKVAPKRLSTGEAALEIARVGDAWRISCTGCGEASPLVEFRWQALEQTVNCRCD*
Ga0163163_122804601	3300014325	Switchgrass Rhizosphere	ELSNLPVVKKPKVEPARHSTGEVALQIARVGSGWRISCTGCGESSRLVQYRWQALDETVPCRCE*
Ga0157380_107877782	3300014326	Switchgrass Rhizosphere	VKKPKVEPTRLSTGEVALEIARVGSAWRISCTGCGEASAPVQFRWQVLDQTVRCRCD*
Ga0157380_135306841	3300014326	Switchgrass Rhizosphere	PKVEPTRLSTGEVALQIARVGDGWQISCTGCGESSPPVQFRWQVLDQTVPCSCT*
Ga0157377_113927772	3300014745	Miscanthus Rhizosphere	ADGDATRYLEVSLSNLPRVAKPKVAPKRLSTGEVALEIQRVGDGWRISCNGCGEASPLVQFRWQVLDQTVPCRCD*
Ga0157376_131092991	3300014969	Miscanthus Rhizosphere	LERLGRELPRPEADAAYLEPELSNLPVVKKPKVEPARHSTGEVALQIARVGSGWRISCTGCGESSRLVQYRWQALDETVPCRCE*
Ga0132258_109962804	3300015371	Arabidopsis Rhizosphere	AISDLPDVRQPKVAPKRLSTGQAPLEIMPVGDAWRIVCTGCGEASTLVRFRWQVLDQTVNCRCA*
Ga0132257_1044058581	3300015373	Arabidopsis Rhizosphere	LPDPPAPDLEPEATPYLEPEIAELPDVRQPKVAPKRLSTGQAPLEIMPVGDAWRIVCTGCGEASTLVRFRWQVLDQTVNCRCA*
Ga0187779_105460013	3300017959	Tropical Peatland	PAPGSGPEYLPLELVDLPRIAKPRVEPKRLSTGQMALEIARVEAGWQISCTGCGESSPPVEFRWQVLDQTVPCRCA
Ga0187777_102774441	3300017974	Tropical Peatland	LERLEARLPTATDAEPPPYLDVSLADLPRVVTAKAAPKRLSTGESALEIARVGDGWRISCTGCGEASPLVQFRWQVLDQTVQCRCD
Ga0187777_109475461	3300017974	Tropical Peatland	RIAKPRAQRWQLSTGQAPLVIVSVGDAWQLSCTGCGETSPLVEFRWQVLDQTVPCRCD
Ga0190272_129716112	3300018429	Soil	ETTLGELEARLPRPEPDGPYLEIELAALPPIAKPMVKPKQLSTGEAPMEIARIGSGWRISCTGCGESSPLVQFRWQALDQSVVCRCE
Ga0190274_119942221	3300018476	Soil	ATGKTKAKAGAAVPDAPYLELTLAELPEIAKPKVQPKRLSTGQAPLEIARIGSEWRISCTGCGEASRLVQFRWQALEETVACRCD
Ga0190274_123615592	3300018476	Soil	PPAAETAPTDGAAVEGPYLELALADLPEIARPKVQPKRLSTGQAPLEIARVGSGWRISCTGCGESSPLVQFRWQVLDETVDCRCE
Ga0190271_112266301	3300018481	Soil	MRALGARLPRPAGADAYLPIDLPDLPEIAKPKVQPKRLSTGQMALEIARIGDSWRISCTGCGEASAPVQFRW
Ga0190271_126219221	3300018481	Soil	IRKPKVEPTRLSTGEVALQIARVGSAWRISCTGCGEASPLVEFRYQVLDQTVPCRCA
Ga0190271_131024712	3300018481	Soil	GIGELEARLPRPDHDAPYLEIEIAALPEIAKPKVKPKRLSTGQAPLEIARFGSAWRISCSGCGEASPLVQFRWQALDQSVVCRCE
Ga0066669_106045662	3300018482	Grasslands Soil	MKFGLFYELQLPKPAEAGPRYLELSLSNLPPVATPKVAPKRLSTGEVALEIARVGDGWRISCTGCGEASPLVQFRWQVLDQTVPCRCG
Ga0066669_121315502	3300018482	Grasslands Soil	RITKPRAEPKRLSSGHAPLEIGRVGSGWRISCTGCGEASPLVQFRWELFDQTVACLCN
Ga0163153_100127108	3300020186	Freshwater Microbial Mat	GQTAARDVATLQRLGAQLPRADAATEYLEPDLPELPHVAKPRVEPKRLSTGQVALEIAPVGNAWRISCTGCGEASPLVQFRWQVLDQTVPCRCA
Ga0163150_100199461	3300020195	Freshwater Microbial Mat	GRGIGAQLPRADAATEYLEPDLPELPHVAKPRVEPKRLSTGQVALEIAPVGNAWRISCTGCGEASPLVQFRWQVLDQTVPCRCA
Ga0210382_105742342	3300021080	Groundwater Sediment	LALSNLPAIAKPRLEPKRFSTGQQPLEIARIGSAWRISCTGCGESSKLVEFRWQVLDQTVACRC
Ga0208848_10682432	3300025509	Arctic Peat Soil	LYLEPELPNLPRITKPKTVPKRLSTGQMALEIARIGSAWRISCTGCGEASPLVEFRWQVLDQTVECRCG
Ga0208355_10319421	3300025581	Arctic Peat Soil	DVSAPRREAAIRLLDSRLPRPGPAAPRYLEISLGKLPPIAKPRVEPRRFSTGQAPLEIARIGDGWRISCTGCGESSALVQFRWQVLDETVACRCD
Ga0207930_10031457	3300025604	Arctic Peat Soil	EPELPNLPRITKPKTVPKRLSTGQMALEIARIGSAWRISCTGCGEASPLVEFRWQVLDQTVECRCG
Ga0207645_105281511	3300025907	Miscanthus Rhizosphere	ALEAQLPKPADGDATRYLEVSLSNLPRVAKPKVAPKRLSTGEVALEIQRVGDGWRISCTGCGEASPLVQFRWQVLDQTVPCRCD
Ga0207649_104610512	3300025920	Corn Rhizosphere	MWPPSITQSATEDAPYLEIEMAELPEIAKPRVEPKRLSTGQAALEISQIGDAWRIRCIGCGEASDPVQFRWQVFDQTVVCRCG
Ga0207651_113398121	3300025960	Switchgrass Rhizosphere	PVADAPYLEVALAEVPEIATPKVQPKRLSTGQAPLEIARIGAEWRISCTGCGEASRLVQYRWQVLDETVPCRCD
Ga0210124_12127851	3300026007	Natural And Restored Wetlands	PARDAAPYLELELADLPPITKPRAEPKRLSTGQAPLEIARVGSGWLISCTGCGETSAPVQFRWQVLDQTVACRCE
Ga0207676_117728352	3300026095	Switchgrass Rhizosphere	AEVELTNLPPIAKPRVKPRRLSTGQAPLEIARIGSAWRISCTGCGEASALVEFRWQVLDQTVRCRCD
Ga0209579_106850342	3300027869	Surface Soil	NLPRVATPKVARKRLSTGEVALEIARVGDGWRISCTGCGEASPLVQFRWQVLDQTVNCRCETLR
Ga0209068_107404222	3300027894	Watersheds	LLTFARQDLSGPGRESEILQLEAQLPGPKDAEPYLEIELAELPEIVKPKVAPKRLSTGQMALEIARVGDSWRISCTGCGEASPLVQFRWQVLDQTVACRCA
Ga0207428_109625642	3300027907	Populus Rhizosphere	GDATRYLEVSLSNLPRVAKPKVAPKRLSTGEVALEIQRVGDGWRISCTGCGEASPLVQFRWQVLDQTVPCRCD
Ga0265326_102348302	3300028558	Rhizosphere	KPRVEPKRLSTGQMALEIARVGDAWRISCTGCGEAAPVVQFRWQVLDQTVPCRCD
Ga0265318_103351702	3300028577	Rhizosphere	ELPDIAKPKIIPKKLSTGQMALEIARIGSGWRISCTGCGEASPLVEFRWQVLDQTVACRC
Ga0247823_109834542	3300028590	Soil	YLEFEEPELPRIVKPRVKPKVMSTGTVPLEIARIENGWRISCTGCGEASPVVPFRWQALDQTVDCRCDD
Ga0302171_101408251	3300028651	Fen	LPEIAKPKARAKRLSTGEAPLEIARVGDGWLISCTGCGESSAPVQFRWQVLDQTVACLCD
Ga0302166_101326771	3300028652	Fen	YLEVELAELPEIAKPKARAKRLSTGEAPLEIARVGDGWLISCTGCGESSAPVQFRWQVLDQTVACLCD
Ga0265336_101785902	3300028666	Rhizosphere	ELTLANLPEITKPKVQPKRLSTGQAPLEIARIASGWRISCTGCGEVSRPVQFRWQVLDETVNCRCD
Ga0302169_101028291	3300028679	Fen	GELLAASPTTPSVAPYLEVELANLPRIAKPRVKAKRLSTGEAPLEIARIGSQWRISCTGCGEASALVQFRWQVLDQTVTCLCD
Ga0302262_100774102	3300028743	Fen	LPSPAAAGAATDLPAPYLEVELAELPEIAKPKARAKRLSTGEAPLEIARVGDGWLISCTGCGESSAPVQFRWQVLDQTVACLCD
Ga0302262_102323682	3300028743	Fen	DPRREAVIRRLDARLPRPDADAPYLGLELATLPPIAKPRVKPRRLSTGHAPLEIARIGTEWRISCTGCGEASPLVQFRWQVLDQTVACLCD
Ga0302258_10034804	3300028770	Fen	ATDLPAPYLEVELAELPEIAKPKARAKRLSTGEAPLEIARVGDGWLISCTGCGESSAPVQFRWQVLDQTVACLCD
Ga0307282_106282261	3300028784	Soil	VAPPSRAVRDAAPYLELALSNLPVIAKPRIEPKRLSTGREPLEIARIGSAWRISCTGCGEASPLVEFRWQVLDQTVACRC
Ga0307503_106186452	3300028802	Soil	YLELALSNLPVVAKPKVQPKRLSTGQAPLEIARIGSEWRISCTGCGEASRLVRFRWQALEETVTCRCD
Ga0311365_107154581	3300029989	Fen	IRRLDTRLPQPKADAPYLKLELANLPRIAKPRVKPRRLSTGEAPLEIARIGSEWRISCTGCGEASPLVQFRWQVLDQTVACLCD
Ga0311365_118663362	3300029989	Fen	PYLELELADLPEIVKPKIIPKRLSTGQMALEIARIGTGWRISCTGCGEASPLVEFRWQVLDQTVACRCR
Ga0311336_117113152	3300029990	Fen	LELAELPQIAKPKVAPKRFSTGQMALEIARVGDGWRISCTGCGEASPLVQFRWQVLDQTVDCRCA
Ga0311337_106704474	3300030000	Fen	NLPRVAKPRVKAKRLSTGEAPLEIARIGSQWRISCTGCGEASALVQFRWQVLDQTVTCLC
Ga0311333_104355343	3300030114	Fen	ELAELPVIAQPKAKAKRLSTGEAPLEIARVGSGWRISCTGCGEASAAVQFRWQVLDQTVACLCD
Ga0311349_102652655	3300030294	Fen	ANLPRVAKPRVKPRRLSTGEAPLEIARIGSEWRISCTGCGEASPLVQFRWQVLDQTVACLCD
Ga0311335_104928203	3300030838	Fen	YLELELADLPEIVKPKIIPKRLSTGQMALEIARIGTGWRISCTGCGEASPLVEFRWQVLDQTVACRCR
Ga0311335_109033023	3300030838	Fen	NLPRIAKPRVKAKRLSTGEAPLEIARIGSQWRISCTGCGEASALVQFRWQVLDQTVTCLC
Ga0311366_115769201	3300030943	Fen	FAQRDRSDPRHEAMIRRLDTRLPQPKADAPYLKLELANLPRVAKPRVKPRRLSTGEAPLEIARIGSEWRISCTGCGEASPLVQFRWQVLDQTVACLCD
Ga0307500_101654592	3300031198	Soil	SPSDGAAVEGPYLELALADLPEIARPKVQPKRLSTGQAPLEIARVGSGWRISCTGCGESSPLVQFRWQVLDETVDCRCE
Ga0265314_104295501	3300031711	Rhizosphere	DAPEYLELELATLPVVTKPRVEPRRLSSGQAPLEIARIGAAWRMSCTGCGETSPSVEFRWQVLDQTVACRCG
Ga0302321_1027267781	3300031726	Fen	PRREAVIRRLDARLPRPDADAPYLGLELATLPPIAKPRVKPRRLSTGHAPLEIARIGTEWRISCTGCGEASPLVQFRWQVLDQTVACLCD
Ga0302322_1000121001	3300031902	Fen	LELANLPRVAKPRVKPRRLSTGEAPLEIARIGSEWRISCTGCGEASPLVQFRWQVLDQTVACLCD
Ga0302322_1020299431	3300031902	Fen	VNPDRSDPRREAVIRRLDARLPRPDADAPYLGLELATLPPIAKPRVKPRRLSTGHAPLEIARIGTEWRISCTGCGEASPLVQFRWQVLDQTVACLCD
Ga0302322_1025686281	3300031902	Fen	QWTPSHDTATRRLGFRLPLPKETGPYLELELAELPQIAKPKVVAKRLSNGHVPLEIARVGHSWRMLCTGCGEASPPVQFRWQVLDQTVACRCD
Ga0307412_111901982	3300031911	Rhizosphere	VELPELPEISKPMVKPKQLSTGQAPLEIARVGAAWRISCTGCGESSPPVQFRWQALEQSVVCRCE
Ga0315281_122977392	3300032163	Sediment	RRLDARLPQPKPDAPYLAPELANLPHIAKPRVKPQRLSTGEAPLEIARIGPAWRISCTGCGEASPLVQFRWQVLDQTVACRCD
Ga0315270_110732092	3300032275	Sediment	QADAPYLELELADLPVIVKPRVEPKRLSTGQAPLEIARIGTAWRISCTGCGEASAPVEFRWQVLDQTVACRCD
Ga0335069_120503372	3300032893	Soil	RDDAELARLDRMLPQPDDATPYLELTLTNVPAVRKPKVEPTRHSTGQVALQIAQVGPGWRISCTGCGEAAPVVKFRWQALDQTVPCRCA
Ga0316603_121606571	3300033413	Soil	SAGAGTDPPAPYLEVELAELPEIATPKARAKRLSTGEAPLEIARVGSGWLISCTGCGESSAPVQFRWQVLDQTVACLCD
Ga0372943_1028373_2_283	3300034268	Soil	ELGVEEHAAISGLESRLPPPDKSTPYLELELAPLPIVVKPRVEPKRLSTGQVPLEIARIGTEWRISCTGCGQASPLVQFRWQLFDQTVACRCA