Metagenome / Metatranscriptome Family F103937

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103937
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	62 residues
Representative Sequence	IGALMTVLTLFLYLPIWVLARGGTTPEIMEAINYVFDTLLYAGTALVLASALPRDPDRVEKT
Number of Associated Samples	94
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.97 %
% of genes near scaffold ends (potentially truncated)	90.10 %
% of genes from short scaffolds (< 2000 bps)	87.13 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.347 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (15.842 % of family members)
Environment Ontology (ENVO)	Unclassified (22.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.525 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.67% β-sheet: 0.00% Coil/Unstructured: 43.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF07883	Cupin_2	3.96
PF01184	Gpr1_Fun34_YaaH	3.96
PF01850	PIN	2.97
PF00578	AhpC-TSA	1.98
PF02954	HTH_8	1.98
PF13377	Peripla_BP_3	1.98
PF00691	OmpA	1.98
PF06491	Disulph_isomer	1.98
PF13650	Asp_protease_2	0.99
PF12244	DUF3606	0.99
PF02517	Rce1-like	0.99
PF01316	Arg_repressor	0.99
PF09363	XFP_C	0.99
PF02687	FtsX	0.99
PF09851	SHOCT	0.99
PF09970	DUF2204	0.99
PF13184	KH_5	0.99
PF14310	Fn3-like	0.99
PF13924	Lipocalin_5	0.99
PF00563	EAL	0.99
PF08327	AHSA1	0.99
PF01842	ACT	0.99
PF07238	PilZ	0.99
PF01451	LMWPc	0.99
PF02348	CTP_transf_3	0.99
PF12680	SnoaL_2	0.99
PF08546	ApbA_C	0.99
PF00583	Acetyltransf_1	0.99
PF00496	SBP_bac_5	0.99
PF00106	adh_short	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1584	Succinate-acetate transporter SatP	Energy production and conversion [C]	3.96
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG1438	Arginine repressor	Transcription [K]	0.99
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.99
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.99
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.99
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.99
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.99
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.35 %
Unclassified	root	N/A	34.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.35 %
Unclassified	root	N/A	34.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.35 %
Unclassified	root	N/A	34.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.59 %
Unclassified	root	N/A	34.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.94 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.97 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	16.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.91 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.95 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.99 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.99 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.91 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	4.95 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.99 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.99 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.99 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.91 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	4.95 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	2.97 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.98 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	1.98 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.98 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.99 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.99 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.99 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.91 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	4.95 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.98 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.98 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	1.98 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.98 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.99 %
Rhizocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rhizocola	0.99 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.99 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.99 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.99 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.91 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	4.95 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.98 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.98 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	1.98 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.98 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.99 %
Rhizocola hellebori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rhizocola → Rhizocola hellebori	0.99 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.99 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.99 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.99 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000731\|JGI12381J11899_1013246	Not Available	663	Open in IMG/M
3300001867\|JGI12627J18819_10447100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	528	Open in IMG/M
3300004092\|Ga0062389_100580602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1282	Open in IMG/M
3300004092\|Ga0062389_102892271	Not Available	642	Open in IMG/M
3300004152\|Ga0062386_100039277	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300005164\|Ga0066815_10074853	Not Available	600	Open in IMG/M
3300005176\|Ga0066679_10084880	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300005526\|Ga0073909_10202923	Not Available	858	Open in IMG/M
3300005541\|Ga0070733_11018612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	556	Open in IMG/M
3300005542\|Ga0070732_10963219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	522	Open in IMG/M
3300005574\|Ga0066694_10497897	Not Available	568	Open in IMG/M
3300005591\|Ga0070761_10646364	Not Available	660	Open in IMG/M
3300005602\|Ga0070762_10820488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	630	Open in IMG/M
3300006028\|Ga0070717_11049337	Not Available	742	Open in IMG/M
3300006086\|Ga0075019_10671608	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	653	Open in IMG/M
3300006102\|Ga0075015_100751518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	582	Open in IMG/M
3300006163\|Ga0070715_10848816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300006173\|Ga0070716_101582319	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006354\|Ga0075021_10157844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1373	Open in IMG/M
3300006354\|Ga0075021_11181710	Not Available	502	Open in IMG/M
3300009522\|Ga0116218_1042203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2062	Open in IMG/M
3300009623\|Ga0116133_1006668	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300009645\|Ga0116106_1165130	Not Available	707	Open in IMG/M
3300009646\|Ga0116132_1135661	Not Available	751	Open in IMG/M
3300009665\|Ga0116135_1171162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300009665\|Ga0116135_1401858	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300009700\|Ga0116217_10582725	Not Available	698	Open in IMG/M
3300009839\|Ga0116223_10096285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1875	Open in IMG/M
3300010341\|Ga0074045_10568283	Not Available	725	Open in IMG/M
3300010343\|Ga0074044_11043114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	536	Open in IMG/M
3300010379\|Ga0136449_100112463	All Organisms → cellular organisms → Bacteria → Acidobacteria	5518	Open in IMG/M
3300012202\|Ga0137363_10076934	Not Available	2474	Open in IMG/M
3300012205\|Ga0137362_11623071	Not Available	533	Open in IMG/M
3300012960\|Ga0164301_10095866	Not Available	1688	Open in IMG/M
3300012986\|Ga0164304_10227646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300014161\|Ga0181529_10178985	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300014168\|Ga0181534_10834561	Not Available	547	Open in IMG/M
3300014838\|Ga0182030_11371165	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300017823\|Ga0187818_10012815	All Organisms → cellular organisms → Bacteria → Acidobacteria	3591	Open in IMG/M
3300018008\|Ga0187888_1297156	Not Available	621	Open in IMG/M
3300018030\|Ga0187869_10093259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1529	Open in IMG/M
3300018033\|Ga0187867_10510322	Not Available	661	Open in IMG/M
3300020582\|Ga0210395_10565123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300021180\|Ga0210396_11168358	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	645	Open in IMG/M
3300021403\|Ga0210397_10027990	All Organisms → cellular organisms → Bacteria	3500	Open in IMG/M
3300021420\|Ga0210394_11793243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	512	Open in IMG/M
3300021479\|Ga0210410_10584083	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300023088\|Ga0224555_1031068	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300025412\|Ga0208194_1019718	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300025414\|Ga0208935_1062888	Not Available	500	Open in IMG/M
3300025482\|Ga0208715_1065548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	651	Open in IMG/M
3300026941\|Ga0207741_1014661	Not Available	883	Open in IMG/M
3300027011\|Ga0207740_1009654	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300027109\|Ga0208603_1003378	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300027576\|Ga0209003_1073708	Not Available	629	Open in IMG/M
3300027662\|Ga0208565_1117952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	789	Open in IMG/M
3300027812\|Ga0209656_10210915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	936	Open in IMG/M
3300027821\|Ga0209811_10340109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300027894\|Ga0209068_10343207	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	844	Open in IMG/M
3300027908\|Ga0209006_11054107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	644	Open in IMG/M
3300028562\|Ga0302151_10110257	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300028574\|Ga0302153_10076989	All Organisms → cellular organisms → Bacteria → Acidobacteria	1126	Open in IMG/M
3300028806\|Ga0302221_10541531	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300029913\|Ga0311362_10256601	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300029917\|Ga0311326_10009223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6292	Open in IMG/M
3300029919\|Ga0302141_1035792	Not Available	1361	Open in IMG/M
3300029920\|Ga0302142_1027335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1833	Open in IMG/M
3300029922\|Ga0311363_10243373	Not Available	2103	Open in IMG/M
3300029939\|Ga0311328_11114383	Not Available	508	Open in IMG/M
3300029943\|Ga0311340_10947102	Not Available	712	Open in IMG/M
3300029945\|Ga0311330_10439546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	1068	Open in IMG/M
3300029953\|Ga0311343_10348358	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300029955\|Ga0311342_10726070	Not Available	778	Open in IMG/M
3300029988\|Ga0302190_10228875	Not Available	752	Open in IMG/M
3300029999\|Ga0311339_10474682	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300029999\|Ga0311339_11970080	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300030047\|Ga0302286_10560095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	581	Open in IMG/M
3300030114\|Ga0311333_10821078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	781	Open in IMG/M
3300030518\|Ga0302275_10022981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5198	Open in IMG/M
3300030518\|Ga0302275_10227562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	1080	Open in IMG/M
3300030520\|Ga0311372_12008452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rhizocola → Rhizocola hellebori	677	Open in IMG/M
3300030618\|Ga0311354_11281347	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300030659\|Ga0316363_10068562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1635	Open in IMG/M
3300031057\|Ga0170834_100918485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	742	Open in IMG/M
3300031090\|Ga0265760_10286632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	580	Open in IMG/M
3300031128\|Ga0170823_16662248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	619	Open in IMG/M
3300031231\|Ga0170824_102996364	Not Available	566	Open in IMG/M
3300031232\|Ga0302323_100825978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1020	Open in IMG/M
3300031234\|Ga0302325_10185904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3616	Open in IMG/M
3300031261\|Ga0302140_10571101	Not Available	857	Open in IMG/M
3300031446\|Ga0170820_11198124	Not Available	511	Open in IMG/M
3300031524\|Ga0302320_11054342	Not Available	854	Open in IMG/M
3300031708\|Ga0310686_115106489	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300031715\|Ga0307476_10893437	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300031754\|Ga0307475_11259074	Not Available	574	Open in IMG/M
3300031754\|Ga0307475_11561635	Not Available	505	Open in IMG/M
3300031788\|Ga0302319_11532668	Not Available	591	Open in IMG/M
3300031823\|Ga0307478_10593005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	927	Open in IMG/M
3300032782\|Ga0335082_10307480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	1457	Open in IMG/M
3300032782\|Ga0335082_10407905	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300033887\|Ga0334790_154677	Not Available	687	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.22%
Aquatic	Environmental → Aquatic	21.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.50%
Peat	Environmental → Terrestrial → Peat	28.71%
Freshwater	Environmental → Aquatic → Freshwater	16.83%
Sediment	Environmental → Aquatic → Sediment	4.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	28.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.83%
Loam	Environmental → Terrestrial → Soil → Loam	11.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	28.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.98%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.99%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	15.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.98%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.99%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000731	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12381J11899_10132462	3300000731	Tropical Forest Soil	LAVNKQSRMAAASIGALMTVLTVFPYLAILLRAHAAPEFNEALNYVADTLLYAGAALALASALPHDPARMELRKL*
JGI12627J18819_104471002	3300001867	Forest Soil	WLALNKGSRIAAASIGGLMTALTVCLYLVVLILAHGAAEINEALNYAADTLLYAGAALALASALPRAPERVEKT*
Ga0062389_1005806023	3300004092	Bog Forest Soil	MTVLTLYPYLLILIHSRGGSVTEINDALNYVADMLLYAGAALALASALPRDPGQSVGGAA
Ga0062389_1028922711	3300004092	Bog Forest Soil	AAAIGALMTVLTLFPYMAMLVRAHGAPEFNEAINYVADTLLYAGAALALASALPRDPARVAKT*
Ga0062386_1000392771	3300004152	Bog Forest Soil	SIGALMTVLTLFPYLAMLVHAGAGSAPEFNEAINYVADTLLYAGAALALASALPRDSDRVAKT*
Ga0066815_100748531	3300005164	Soil	LNKKSRIAAASIGALMTILTLCPYFILLVLARGGPQINEALNYVADTLLYAGAALALASALPRDADRVEKT*
Ga0066679_100848802	3300005176	Soil	MTALTLFLYLLILILAHGGSAPQINEELNYVADTLLSAGAALVLASALPRDPDRVEKT*
Ga0073909_102029233	3300005526	Surface Soil	FMTIVVLWLHLPVLVIAHGAPAINEGLNYVADTLLYAGSALALASALPSEENLTTK*
Ga0070733_110186121	3300005541	Surface Soil	SRIGAASIGALMTVLTLFPYTLILLRAHGGSPLEINEGLNYVADTLLYAGSALALAAALPHNPDARKKT*
Ga0070732_109632192	3300005542	Surface Soil	ASIGALMTVLTLVLYLLILIHAHGAPEINEALNYVADTLLYAGAALVLASALPRASVVMRGS*
Ga0066694_104978972	3300005574	Soil	FLNKKSRLGAASIGGLMTTLTLCLYLPMLIRSHGVAEINEAVNYLADTWLYAGTTLALAAALPRDPDGVTTT*
Ga0070761_106463641	3300005591	Soil	AAASIGALMTVLTLFLYLVVLILAYRSAPEFNDALNYVADTLLYAGSALALASALPRDPGRVEKA*
Ga0070762_108204881	3300005602	Soil	GIGLALNKKPRMAAASIGALMTVLTLFPYLVILILAIGGSAQDFNDALNYVADTWLFAGAALVLASALPRDPARMEKT*
Ga0070717_110493372	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LALNIRPRIAAASIGALMAVLTLFPYLLILIRAHGGSEINEAINYVADTWLYAGSALVLASALPRDPDGVAKT*
Ga0075019_106716082	3300006086	Watersheds	FLYLPILILAHGGSVPEINEELNYVADTLLYAGAALALASALPRDPDRVEET*
Ga0075015_1007515181	3300006102	Watersheds	RMAAASIGALMTVLTVFPYLVILLLAVAGPAPEFNEAINYVADTLLYAGAALALASALPRDPARMTTT*
Ga0070715_108488162	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GIALALNKKSRMAAVSIGALMTAVTLFLYLPGLVLAYGGPEMNEALNYFADTLLYAGAALALASASPRDADRVERT*
Ga0070716_1015823192	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PILILALGGSVPEINEELNYVADTLLYAGAALALASALPRDPDPVELSPATTRM*
Ga0075021_101578441	3300006354	Watersheds	LMTVLTLFLYLPMLILAHGGSMLEINQGLDNVFDTLLFAGAALVLASALPRDPDQ*
Ga0075021_111817102	3300006354	Watersheds	TVLTLCPYFILLVLARGGPAINEGLNYVADTLLHAGAALALASALPRDPDRVEKT*
Ga0116218_10422033	3300009522	Peatlands Soil	LTLFLYLPIWILAHGGSTPKIMEAINYVFDTLLYPGTALVLASALPPDPDRVEGT*
Ga0116133_10066683	3300009623	Peatland	LFLYVPDWIIARGGTTPEIMEAINYVFDTLFYAGTALVLASALPRDPERAQET*
Ga0116106_11651301	3300009645	Peatland	ALMTVLTLFLYLPIWILARGGTTPEIMEAINYVFDTLLYAGTALVLASAMPRDSDREEKT
Ga0116132_11356611	3300009646	Peatland	GALMTVLTLFLYLPIWILAHGGTTPEIMEAINYVFDTLLFAGTALVLASALPRDPDPVEKT*
Ga0116135_11711622	3300009665	Peatland	LTLFLYVPSWILARGGTTPEIMAAINYVFDTLLYAGAALALASALPRNCARQR*
Ga0116135_14018581	3300009665	Peatland	VMTFLTLFLYLPMWILARGGTTPEIMDAINYVFDTLLYGGTALVLASALPRDSDLQSTAVQ*
Ga0116217_105827252	3300009700	Peatlands Soil	WIAATSIGALMTVLALSLELIMLILALAHGGSTAEINDALDYVFDTLLYGGAALVLASALPRDPDGVAKT*
Ga0116223_100962853	3300009839	Peatlands Soil	TLFLYLPIWILAHGGSTPKIMEAINYVFDTLLYAGTALVLASALPPDPDRVEGT*
Ga0074045_105682831	3300010341	Bog Forest Soil	MRKREAVSFWGTAGIALALNKKPRLAAASIGAFMTAALTLFLYIVMLVRAHGAPEFNEAINYVADTLLYAGAAIALASALPRDPDRVAKT*
Ga0074044_110431142	3300010343	Bog Forest Soil	MTALTLSLYLLILIRAHGAPEINEALNYVADTLLYAGAALALASALPPDPDRRENRNRLP
Ga0136449_1001124631	3300010379	Peatlands Soil	LYLPIWILARGGTTPEIMEAINYVFDTLLYAGTALVLASALPRDPDHVEKT*
Ga0137363_100769342	3300012202	Vadose Zone Soil	AGAVLLAAGIGLALNKKSRMAAASIGTLMTAVTLILYLPALVHALIGPTPEINEALNYFADTLVYAGSAFALASVLPREG*
Ga0137362_116230712	3300012205	Vadose Zone Soil	VLTLFLYLLILILARGGSAPESNEALNYLADTLLFAGAALVLASALPRAGAV*
Ga0164301_100958662	3300012960	Soil	FLYLPSLVFAHGGPEMNEALNYVADTLLYAGAALALASALPREAGVVGKT*
Ga0164304_102276461	3300012986	Soil	YLPILVFAHGGQEMNEALNYFADTLLYAGAALALASALPREAGVVGKT*
Ga0181529_101789852	3300014161	Bog	ALFLYVPDWIIARGGTTPEIMEAINYVFDTLFYAGTALVLASALPRDPERAQET*
Ga0181534_108345612	3300014168	Bog	AASIGALMTALTLFLYLPILILAFKGSPPEFNDALNYAADTLLYAGAALALASALPRESR
Ga0182030_113711652	3300014838	Bog	IGALMTALTLFFYLPILIHSLGGSPDDINDGINYVADTLLYAGAALALAMALPRDSAAAGEP*
Ga0187818_100128151	3300017823	Freshwater Sediment	ISATSIGALMTVLTLFLYLPIWILAHGGTTPEIMEAINYVFDTLLYAGTALVLASALPRDPDRVEKT
Ga0187888_12971561	3300018008	Peatland	QIAATSIGALMTVLALFLYVPDWIIARGGTTPEIMEAINYVFDTLFYAGTALVLASALPRDPERAQET
Ga0187869_100932592	3300018030	Peatland	LPIWVLARGGTTPEIMEAINYVFDTLLYAGTALVLASALPRNPDRVERT
Ga0187867_105103222	3300018033	Peatland	IGALMTVLTLFLYLPIWVLARGGTTPEIMEAINYVFDTLLYAGTALVLASALPRDPDRVEKT
Ga0210395_105651232	3300020582	Soil	TLFLYVVILILARGGPAINEALNYVADTLLYAGAALALASALPRDPDRVQKT
Ga0210396_111683582	3300021180	Soil	SRIAAASIGALMTALTLFLYLPILILAAHGGSVPQINEELNYVADTLLYAGAALALASALPRDPERSVERLRDSECAT
Ga0210397_100279904	3300021403	Soil	LSLELIMLILILAHGGSTAEINEGLDYVFDTLMYGGAALVLASALPRDSERLQKT
Ga0210394_117932432	3300021420	Soil	LMTVVTLSLYLLILILAHGRPAPDINEALNYVADTLLYAGAALVLASALPRDPNRAPLIFSGS
Ga0210410_105840832	3300021479	Soil	ALNKKSRTAAAAIGALMTALTLFLYLLILVRAHGGSEINEALNYVADTLLYAGAALALASALPRDPSAPVPKGQP
Ga0224555_10310684	3300023088	Soil	GALMTALVLFLYLPMMVVAYHGAAGDFNEALNYVADTLLYAGAALGLASALPTDGAEKA
Ga0208194_10197183	3300025412	Peatland	TLFLYLPMWILARGGTTPEIMEAINYVFDTLLYGGTALVLASALPRDSDLQSTAVQ
Ga0208935_10628882	3300025414	Peatland	NKKSRIAAISIGALMTVLTLFLYLPIWILAHGGTTPEIMEAINYVFDTLFYAGTALVLASALPRDPERAQET
Ga0208715_10655482	3300025482	Arctic Peat Soil	GIALALNKKPRIAAASIGALTTLLTLFPYLAMLVRAHGAPEFNEAINYVADTLLYAGAALALASALPRDPDRVGIIT
Ga0207741_10146611	3300026941	Tropical Forest Soil	GALMTVLTVFPYLAILLRAHAAPEFNEALNYVADTLLYAGAALALASALPHDPARMELRK
Ga0207740_10096541	3300027011	Tropical Forest Soil	AAASIGALMTVLTVFPYLAILLRAHAAPEFNEALNYVADTLLYAGAALALASALPHDSARMEQT
Ga0208603_10033781	3300027109	Forest Soil	MAAVSIGALVTVLTLFLYLPIWILAHGGTTPAIMEAINYVFDTWLYAGTALVLASALPRDPDHVEKT
Ga0209003_10737081	3300027576	Forest Soil	VCLYLVVLILAHGAAEINEALNYAADTLLYAGAALALASALPRAPERVEKT
Ga0208565_11179523	3300027662	Peatlands Soil	IGALMTVLTLFLYLPIWILARGGTTPEIMEAINYVFDTLLYAGTALVLASALPRDDALPARATMRSGESLTCPL
Ga0209656_102109151	3300027812	Bog Forest Soil	LALNKKPRMAAASIGALMTVLTLFPYLAMLVRAGGGPASEFNEALNYVADTLLYAGAALALASALPRDPARVAKA
Ga0209811_103401091	3300027821	Surface Soil	FMTIVVLWLHLPVLVIAHGAPAINEGLNYVADTLLYAGSALALASALPSEENLTTK
Ga0209068_103432071	3300027894	Watersheds	LMTVLTLFLYLPMLILAHGGSMLEINQGLDNVFDTLLFAGAALVLASALPRDPDQ
Ga0209006_110541072	3300027908	Forest Soil	MTVHTLFLYLPILILAHGAATADINEALNYVADTLQFAGAALVLASALPR
Ga0302151_101102571	3300028562	Bog	AAALGALMTALTLLLYVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALAAALPREAD
Ga0302153_100769891	3300028574	Bog	TAIGALMTALTLFLYVPTWILAHGGTTPEIMEAINYVFDTLLYAGVALALASALPRDQADLAAASNPPPAA
Ga0302221_105415312	3300028806	Palsa	LTLFLYLPIWILARGGTTPEIMEAINYVFDTLLYAGAALVLASALPRDPDRVEKT
Ga0311362_102566011	3300029913	Bog	ALGALMTALTLLLYVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALAAALPREAD
Ga0311326_100092235	3300029917	Bog	VNIKARIAATAIGALMTALTLFLYVPAWILAHGGTTPEIMDAINYVFDTLLYAGVALALASALPRDGAHVSGSYP
Ga0302141_10357922	3300029919	Bog	MTALTLFLYVPAWILAHGGTTPEIMDAINYVFDTLLYAGVALALASALPRDGAHVSGSYP
Ga0302142_10273351	3300029920	Bog	KARIAATAIGALMTALTLFLYVPAWILAHGGTTPEIMDAINYVFDTLLYAGVALALASALPRDGAHVSGSYP
Ga0311363_102433733	3300029922	Fen	GALMTALTLLLYVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALASALQRETRAVEL
Ga0311328_111143831	3300029939	Bog	YVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALAAALPREAD
Ga0311340_109471022	3300029943	Palsa	YLLVLIFAHGSPEINDALNYVADTLLFAGAALVLASALPRAPGMDSQR
Ga0311330_104395461	3300029945	Bog	LYVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALASALQRETRAVELG
Ga0311343_103483581	3300029953	Bog	ALTLLLYVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALAAALPREAD
Ga0311342_107260701	3300029955	Bog	ALGALMTALTLLLYVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALASALQRETRAVELG
Ga0302190_102288751	3300029988	Bog	FLYVPAWILAHGGTTPEIMDAINYVFDTLLYAGVALALASALPRDGAHVSGSYP
Ga0311339_104746821	3300029999	Palsa	LTLFLYLPILILARNGSPAAFNDALNYVADTLLYAGAALALASALPHDSEPAAPHAGPS
Ga0311339_119700801	3300029999	Palsa	MTAVTLFLCLPVLVLARNGSPVDVNDALNYVADTLLYAGSALALASALPRDHKLAGPQ
Ga0302286_105600951	3300030047	Fen	GSALLLNKKPRMAAAAIGTLMTFLTVVPYLVILVRAIGGPAPEFNEAINYVADTLLYAGSALALALALPREPDRVVL
Ga0311333_108210781	3300030114	Fen	VVPYLVILVRAIGGPAPEFNEAINYVADTLLYAGSALALALALPREPDRVVL
Ga0302275_100229817	3300030518	Bog	ALNLKSRIAAASIGALMTALVLFLYLPMMVVAYHGAAGDFNEALNYVADTLLYAGAALGLASALPTDGAEKA
Ga0302275_102275623	3300030518	Bog	LMTALTLLLYVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALASALQRETRAVELG
Ga0311372_120084522	3300030520	Palsa	IGALMTVLTLCLCLPTLIRAHGAPDINDALNYVADTLLYAGAALVLASALPRDPDRAW
Ga0311354_112813472	3300030618	Palsa	FLYLPIWILARGGTTPGIMEAINYVFDTLLYAGTALVLASALPRDPDGVERM
Ga0316363_100685623	3300030659	Peatlands Soil	LTLFLYLPIWILAHGGSTPKIMEAINYVFDTLLYAGTALVLASALPPDPDRVEGT
Ga0170834_1009184851	3300031057	Forest Soil	MAAISIGALMTVLTLFLYLPIWILGHGGTTPAIMEATNYVFDALLYAGTALVLASALPRVPDRVENTSVPPVTLSGL
Ga0265760_102866322	3300031090	Soil	GIGLALNKRSQLAAISIGGLMTVLTLFLYVPIWILAHGGTTPEIMEAINYVFDTLLYAGTALVLASALPRDPSRVEKT
Ga0170823_166622482	3300031128	Forest Soil	MAAISIGALMTVLTLFLYLPIWILGHGGTTPAIMEAINYVFDALLYAGTALVLASALPRVPDRVENTSVPPVTLSGL
Ga0170824_1029963642	3300031231	Forest Soil	MTALTLFLYLPIWILARGGTTPQIMEAINYVFDTLIYAGTALVLASALPPAADRVENA
Ga0302323_1008259782	3300031232	Fen	PRMAAAAIGTLMTFLTVVPYLVILVRAIGGPAPEFNEAINYVADTLLYAGSALALALALPREPDRVVL
Ga0302325_101859041	3300031234	Palsa	LMTVLTLFLYVVVLILAHDGPDINDALNYVAETLLFAGAALVLASALPRDPARVG
Ga0302140_105711012	3300031261	Bog	ALNRRSRMAAATIGALMTALTLGLYLPILIFARSGSTADINDALNNIADTLLYAGATLALAQSLPRSYDRVEKA
Ga0170820_111981242	3300031446	Forest Soil	MTALTLFLYLPIWILAQGGTTPQIMEAINYVFDTLIYAGTALVLASALPPAADRVENA
Ga0302320_110543421	3300031524	Bog	AAALGALMTALTLLLYVPIWILAHAGSTPEIMEAINYVFDTLLYAGAALALASALQRETRAVELG
Ga0310686_1151064891	3300031708	Soil	LMTVLTLFPYLLILILAHGAPEFNEALNYVADTLLYAGAALVLASALPRDPGRVEKT
Ga0307476_108934372	3300031715	Hardwood Forest Soil	SIGALMTVLTLSLYLLILVLARGGSEVNEALNYVADTWLFAGAALALASALPRDSERVEQ
Ga0307475_112590742	3300031754	Hardwood Forest Soil	TLSLYLLILIRAHGASGVNEALNYVADTLLYAGAALALASALPRDPDRLR
Ga0307475_115616351	3300031754	Hardwood Forest Soil	TVLTLCLYLVILIRAHGAAEINEALNYVADTLLYAGAALALASALPRDSETWWS
Ga0302319_115326682	3300031788	Bog	ALMTFFTLFLYLPILILAHGGSTPEITEAINYVFDTLLFAGTALALASALPRDPDGVEKT
Ga0307478_105930052	3300031823	Hardwood Forest Soil	LTLFPYLVILILAIGGSAQDFNDALNYVADTWLFAGAALVLASALPRDPARMEKT
Ga0335082_103074803	3300032782	Soil	FLTLFLYLPILILAYGGTTPEFNEELNYVADTLLYAGATLVLASALPRHPDIA
Ga0335082_104079053	3300032782	Soil	ASIGALITVLTLFPYLLMLIRAHGGSEINEALNYVADTLLYAGAALALASALPRGSDDVEKT
Ga0334790_154677_413_634	3300033887	Soil	LALNKQSRIAATSIGALMTVLTLSLYLLILILAHGGSEINEALNYVADTWLYAGAALALASALPGDPDRVEKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103937

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences