Metagenome Family F103929

Overview

Basic Information

• Family ID: F103929
• Family Type: Metagenome
• Number of Sequences: 101
• Average Sequence Length: 44 residues
• Representative Sequence: MPQEVSISYQAVKSKVYKLIDALVEGSKTESEVQESMRRWWQLI
• Number of Associated Samples: 94
• Number of Associated Scaffolds: 101

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 25.74 %
• % of genes from short scaffolds (< 2000 bps): 23.76 %
• Associated GOLD sequencing projects: 91
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (75.248 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.832 % of family members)
• Environment Ontology (ENVO): Unclassified (28.713 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (50.495 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 43.06%
  β-sheet: 0.00%
  Coil/Unstructured: 56.94%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00255	GSHPx	28.71
PF02517	Rce1-like	3.96
PF08241	Methyltransf_11	0.99
PF02646	RmuC	0.99
PF00120	Gln-synt_C	0.99
PF13437	HlyD_3	0.99
PF14437	MafB19-deam	0.99
PF13524	Glyco_trans_1_2	0.99
PF01425	Amidase	0.99
PF04542	Sigma70_r2	0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	28.71
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	3.96
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	3.96
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.99
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.99
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.99
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	0.99
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.99
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.99

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.25 %
All Organisms	root	All Organisms	24.75 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.25 %
cellular organisms	root	All Organisms → cellular organisms	24.75 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.75 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.83 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.91 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.91 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005175|Ga0066673_10224970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1079
3300005180|Ga0066685_11051840	All Organisms → cellular organisms → Bacteria → Acidobacteria	535
3300005446|Ga0066686_10312485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069
3300005566|Ga0066693_10447210	All Organisms → cellular organisms → Bacteria → Acidobacteria	529
3300006800|Ga0066660_10972541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685
3300009177|Ga0105248_12601068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577
3300010376|Ga0126381_100894845	All Organisms → cellular organisms → Bacteria	1278
3300010376|Ga0126381_103667162	Not Available	601
3300012198|Ga0137364_10245177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323
3300012285|Ga0137370_10413989	All Organisms → cellular organisms → Bacteria → Acidobacteria	817
3300017972|Ga0187781_10188870	All Organisms → cellular organisms → Bacteria	1452
3300020579|Ga0210407_10952888	All Organisms → cellular organisms → Bacteria	656
3300021560|Ga0126371_12829795	All Organisms → cellular organisms → Bacteria	588
3300025933|Ga0207706_11094549	All Organisms → cellular organisms → Bacteria	666
3300025940|Ga0207691_10230577	All Organisms → cellular organisms → Bacteria	1604
3300025941|Ga0207711_11954481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529
3300025986|Ga0207658_11941584	All Organisms → cellular organisms → Bacteria → Acidobacteria	536
3300026309|Ga0209055_1114141	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045
3300027660|Ga0209736_1014038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2532
3300027829|Ga0209773_10137371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016
3300027869|Ga0209579_10170930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161
3300031720|Ga0307469_10036988	All Organisms → cellular organisms → Bacteria	2916
3300031720|Ga0307469_10930610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807
3300031720|Ga0307469_11091299	All Organisms → cellular organisms → Bacteria → Acidobacteria	749
3300033158|Ga0335077_12098514	All Organisms → cellular organisms → Bacteria	522
3300033808|Ga0314867_094626	All Organisms → cellular organisms → Bacteria → Acidobacteria	695

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.12%
Host-Associated	Host-Associated	11.88%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.17%
Plants	Host-Associated → Plants	11.88%
Aquatic	Environmental → Aquatic	4.95%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.89%
Freshwater	Environmental → Aquatic → Freshwater	1.98%
Sediment	Environmental → Aquatic → Sediment	1.98%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.38%
Loam	Environmental → Terrestrial → Soil → Loam	11.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.99%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.99%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental
3300012212	Combined assembly of Hopland grassland soil	Host-Associated
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00306060	2199352025	Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNTVEVQESIRRWWKLIHPSD
Ga0062594_1013294491	3300005093	Soil	MPQEVSISYQAVKSKVYKLIDAMVEGEKSPAEIQESMHRWWALVHPAD
Ga0066677_107812902	3300005171	Soil	MNQEISISYRAVKSKIYKLIDALVEGEKDEVEVQESIQRW
Ga0066680_109100021	3300005174	Soil	MGQEVSISLQAVKTKVYKLIDALIEGAKTETEVQESIRRWWKLIHPA
Ga0066673_102249701	3300005175	Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIHPADRPVAEKYL
Ga0066679_102219283	3300005176	Soil	MNCGKGRRMNQEISISYRAVKSKIYKLIDALVEGEKDEAEV
Ga0066685_110518401	3300005180	Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIHPADRPVAEK
Ga0070690_1006507231	3300005330	Switchgrass Rhizosphere	MPQEVSISYQAVKSKVYKLVDAMAEGDKNSVEVQESIRRWWKLIHPSDRAV
Ga0070674_1011502831	3300005356	Miscanthus Rhizosphere	MPQEVSISYQAVKSKVYKLVDAMVEGDKNSLEVQESIRRWWKLIHPSDRAVAQ
Ga0066686_103124852	3300005446	Soil	MGQEVSVSLQAVKTKVYKLIDALIEGAKTEAEVQESIRRWW
Ga0070706_1004410451	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIHPADR
Ga0070699_1012837841	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGQEVSVSLQAVKTKVYKLIDALIEGAKTEAEVQESIRRWWKL
Ga0070731_108803012	3300005538	Surface Soil	MPQEISVSYQAVKSKVYKLIDAAVEGEKTDQQIRESLARWWKL
Ga0070665_1017204612	3300005548	Switchgrass Rhizosphere	MGQEVSISYQAVKSRVYRLIDALVEGAKTEEDVQESVR
Ga0066699_108843242	3300005561	Soil	MGQEVSISLQAVKTKVYKLIDALIEGAKTETEVQESIR
Ga0066693_104472101	3300005566	Soil	MPQEISISYQAVKSKVYRLIDAVVEGSKTESEVRESMRRWWMLIHPADRPVAEK
Ga0066702_103440301	3300005575	Soil	MNQEISISYRAVKSKIYKLIDALEEGEKDEAEVQESIRRWWK
Ga0066651_101491733	3300006031	Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWW
Ga0066696_108576711	3300006032	Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWML
Ga0066656_102532894	3300006034	Soil	MNQEISISYRAVKSKIYKLIDALVEGEKNEAEVQESIQRW
Ga0066656_105533221	3300006034	Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIHPAD
Ga0070715_109836301	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRRWWKLIHP
Ga0070716_1001920913	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGQEISVSYQAVKSKVYKLIDALVEGSKTPAEVQLSIQRWW*
Ga0070765_1021212592	3300006176	Soil	MPQEVSISYQAVKSKVYKLIDALVEGSKTESEVQESMRRWWQLI
Ga0066665_108680902	3300006796	Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLI
Ga0066660_109725411	3300006800	Soil	MNQEISISYRAVKSKIYKLIDALVEGEKNEAEVQESIQRWWKMVRPDDRAVAEKYL
Ga0066660_112104342	3300006800	Soil	MNQEISISYRAVKSKIYKLIDALVEGEKDEAEVQESIQRWWKMVRPD
Ga0079221_100978421	3300006804	Agricultural Soil	MNQEISISYRAVKSKIYKLIDALVEGEKNEAEVQESIRRWWKMVR
Ga0073928_101099751	3300006893	Iron-Sulfur Acid Spring	MNQEISISYRAVKSKIYKLIDALVEGEKDEAEVRESIQRWWKMV
Ga0075424_1005812181	3300006904	Populus Rhizosphere	MPQEVSISYQAVKSKVYKLIDAMVEGEKSPVEVQESMQRWW
Ga0099829_101619661	3300009038	Vadose Zone Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRE
Ga0099828_105185461	3300009089	Vadose Zone Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKTTIEVQESIRRWWNLIHPS
Ga0099827_104554081	3300009090	Vadose Zone Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTETEVRESMRRWWM
Ga0099792_110229402	3300009143	Vadose Zone Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRRWWKLIH
Ga0105248_126010682	3300009177	Switchgrass Rhizosphere	MGQEVSVSYQAVKSRVYRLIDSLVEGAKTEQEIQESMQRWWKLVHP
Ga0105237_125137222	3300009545	Corn Rhizosphere	MGQEVSISYQAVKSRVYRLIDALVEGAKTEEDVQESVRRWWKL
Ga0105249_110172422	3300009553	Switchgrass Rhizosphere	MPQEVSISYQAVKSKVYKLVDAMVEGDKNTVEVQESIRRWWKLIHPS
Ga0116217_106988132	3300009700	Peatlands Soil	MGQEVSISYQAVKSKVYKLIDALVEDMKTEGDVQESMKR
Ga0126380_115674101	3300010043	Tropical Forest Soil	MPQEVSISYQAVKSKVYKLIDAMVEGEKSPLEVQESMQRWW
Ga0126381_1008948452	3300010376	Tropical Forest Soil	MGQDVSVSYQAVKSRVYRLIDSLAEDGKTTNDVKDSLK
Ga0126381_1036671622	3300010376	Tropical Forest Soil	MAQSVSVSYQAVKSRVYRLIDSLAEDKKTTNDVKDS
Ga0134126_118301241	3300010396	Terrestrial Soil	MNQEISISYRAVKSKIYKLIDALVEGEKSEAEVQESIRRWWKMVR
Ga0134121_109332611	3300010401	Terrestrial Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNSAEVQESIRR
Ga0137388_113245741	3300012189	Vadose Zone Soil	MPQEVSISYQAVKSKVYKLIDAMVEGEKTEAEVQESMRRWWALIHPSDRPV
Ga0137364_102451772	3300012198	Vadose Zone Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIHPADRPVA
Ga0137383_112285402	3300012199	Vadose Zone Soil	MGQEVSISLQAVKTKVYKLIDALIEGAKTEAEVQESIRRWWKLI
Ga0137381_113511481	3300012207	Vadose Zone Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIHPA
Ga0137376_107887882	3300012208	Vadose Zone Soil	MPQEISISYQAVKSKVYKLVDAMVEGEKTPMEVQESMRRWWS
Ga0150985_1156926151	3300012212	Avena Fatua Rhizosphere	MAQEISISQQAVKGRIYKLIDAMVEGTKTEFEIQESIIRWWGL
Ga0137370_104139891	3300012285	Vadose Zone Soil	MGQEISVSLQAVKTKVYKLIDALIEGAKTEAEVQESIRRWW
Ga0137407_104918022	3300012930	Vadose Zone Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQE
Ga0137407_112422801	3300012930	Vadose Zone Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIH
Ga0164309_101093713	3300012984	Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNSVEVQESI
Ga0164305_116185921	3300012989	Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNSVEVQESIRRWWKLIHPSDRAVA
Ga0137412_109738891	3300015242	Vadose Zone Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRHWWKL
Ga0134083_103786311	3300017659	Grasslands Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIHPADRP
Ga0187779_106987681	3300017959	Tropical Peatland	MSQEISVSYQAIKSKVYKLIDAAVEGEKTDAQIQESMQRWWKLVHPADRI
Ga0187783_102519171	3300017970	Tropical Peatland	MPQEISVSYQAIKSKVYKLIDAAVEGEKSEQQIRESMQR
Ga0187781_101888703	3300017972	Tropical Peatland	MSQEISVSYQAIKSKVYKLIDAAVEGEKTEAQVQESLERWWKLVHPSD
Ga0187777_101595851	3300017974	Tropical Peatland	MPQEISVSYQAVKSKVYKLIDAAVEGEKSEQQIRESMQRWWKLIHPADRVV
Ga0184605_101966272	3300018027	Groundwater Sediment	MPQEVSISYQAVKSKVYKLVDAMVEGDKNTAEVQESIRRWWSLIH
Ga0187788_104383052	3300018032	Tropical Peatland	MPQEVSISYQAVKSKVYKLVDAMVEGDKNTLEVQE
Ga0187859_106278652	3300018047	Peatland	MGQEVSVSYQAVKSKVYKLIDAMVEDMKNQGDVQESM
Ga0187766_113366991	3300018058	Tropical Peatland	MGQEISISYQAVKSKVYRLIDALVEGSKTEIEVQES
Ga0193747_10682502	3300019885	Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNSAEVQESIRRWWSLI
Ga0193732_10293252	3300020012	Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNTIEVQESIRR
Ga0210407_109528883	3300020579	Soil	VPQEISVSYRAIKSRIYRLIDAMVVGEKTGAEVQESIRRWWILVHPADRPIA
Ga0210406_109148852	3300021168	Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRRWW
Ga0210410_103677553	3300021479	Soil	MPQEVSISYQAVKSKVYKLIDALVEGSKTESEVQESM
Ga0126371_128297952	3300021560	Tropical Forest Soil	MGQEVSVSYQAVKSRVYRLIDSLVEGAKTEQEIQESMQRWW
Ga0247799_10549712	3300023072	Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNSLEVQE
Ga0207680_109128112	3300025903	Switchgrass Rhizosphere	MPQEVSISYQAVKSKVYKLVDAMVEGDKNSLEVQES
Ga0207664_118993222	3300025929	Agricultural Soil	MNQEISISYRAVKSKIYKLIDALVEGEKNEAEVQESIRRWWKMVRPDDRAVAE
Ga0207706_110945491	3300025933	Corn Rhizosphere	MGQEVSVSYQAVKSRVYRLIDSLVEGAKTEQEVQESMQRWWKLVHP
Ga0207691_102305772	3300025940	Miscanthus Rhizosphere	MGQEVSVSYQAVKSRVYRLIDSLVEGAKTEQEVQESMQRWWKLV
Ga0207711_119544812	3300025941	Switchgrass Rhizosphere	MGQEVSVSYQAVKSRVYRLIDSLVEGAKTEQEIKESMQRW
Ga0207658_119415841	3300025986	Switchgrass Rhizosphere	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRRWWKLIHPSDRAVAQKYLLMV
Ga0209055_11141411	3300026309	Soil	MGQEVSISLQAVKTKVYKLIDALIEGAKTETEVQESIRRWWKLIHPADRAVAQ
Ga0209470_12616532	3300026324	Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRES
Ga0257180_10315682	3300026354	Soil	MPQEVSISYQAVKSKVYKLVDAVVEGDKNTIEVQESIRRWWKLIHPSD
Ga0209806_10941632	3300026529	Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWMLIHPADRPV
Ga0209331_11331131	3300027603	Forest Soil	MPQEVSISYQAVKSKVYKLVDAMVEGEKSPTEVQESIRRWWSLIHPC
Ga0209736_10140381	3300027660	Forest Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRRWWKLIHPSDRAVAQ
Ga0209073_104317682	3300027765	Agricultural Soil	MNQEISISYRAVKSKIYKLIDALVEGEKNEAEVQESIRRWWKMVRPDDRA
Ga0209773_101373711	3300027829	Bog Forest Soil	MSQEISVSYQAVKSKVHKLIDAAVEGEKTDAQIRNS
Ga0209701_104142761	3300027862	Vadose Zone Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNQVEVQESIRRWWKLIHPSD
Ga0209579_101709301	3300027869	Surface Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKSPLEVQESIRRWWKLIHPSDRAVAQKY
Ga0209488_101332633	3300027903	Vadose Zone Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRRW
Ga0209583_102796242	3300027910	Watersheds	MPQEVSISYQAVKSKVYKLVDAMVEGDKNTIEVQESIRRWWKLIHPSDRAV
Ga0209526_101672631	3300028047	Forest Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNTIEVQE
Ga0170818_1066217932	3300031474	Forest Soil	MGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVK
Ga0307469_100369884	3300031720	Hardwood Forest Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRRWWKLIHPSDRAV
Ga0307469_109306101	3300031720	Hardwood Forest Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNPVEVQESIRRWWNLIHPSDRAVAQKYL
Ga0307469_110912992	3300031720	Hardwood Forest Soil	MGQEISVSLQAVKTKVYKLIDALIEGAKTEAEVQESVRRWWKL
Ga0307475_106347762	3300031754	Hardwood Forest Soil	MGQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADR
Ga0318533_114311931	3300032059	Soil	MPQEVSVSYQAVKSKVYKLIDAAVEGEKSEQQIRESMQRWWK
Ga0307471_1011454593	3300032180	Hardwood Forest Soil	MPQEISISYQAVKSKVYRLIDAMVEGSKTESEVRESMRRWWM
Ga0307471_1043141281	3300032180	Hardwood Forest Soil	MGQEVSISLQAVKTKVFKLIDALIEGAKTEAEVQESIRRWWKLIHPADRAV
Ga0335077_120985142	3300033158	Soil	MGQEVSVSYQAVKSRVYRLIDSLVEGAKTEQDIQDSMK
Ga0316624_115498391	3300033486	Soil	MPQEVSISYQAVKSKVYKLVDAMVEGDKNSLEVQESIRRWWKLIHPSDR
Ga0314867_094626_3_125	3300033808	Peatland	MSQEISVSYQAIKSKVYRLIDAAVEGEKTEAQIQQSMQRWW