NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F103912

Metagenome Family F103912

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103912
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 64 residues
Representative Sequence MSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEERVRESFQ
Number of Associated Samples 72
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 73.27 %
% of genes near scaffold ends (potentially truncated) 20.79 %
% of genes from short scaffolds (< 2000 bps) 66.34 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (47.525 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(46.535 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.059 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 75.81%    β-sheet: 0.00%    Coil/Unstructured: 24.19%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF11753DUF3310 7.92
PF00271Helicase_C 4.95
PF13538UvrD_C_2 3.96
PF00176SNF2-rel_dom 3.96
PF01381HTH_3 1.98
PF01870Hjc 0.99
PF00580UvrD-helicase 0.99
PF13489Methyltransf_23 0.99
PF08765Mor 0.99
PF06147DUF968 0.99
PF06356DUF1064 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0210Superfamily I DNA or RNA helicaseReplication, recombination and repair [L] 0.99
COG10743’-5’ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)Replication, recombination and repair [L] 0.99
COG1591Holliday junction resolvase Hjc, archaeal typeReplication, recombination and repair [L] 0.99
COG3973DNA helicase IVReplication, recombination and repair [L] 0.99
COG5566Transcriptional regulator, middle operon regulator (Mor) familyTranscription [K] 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.48 %
UnclassifiedrootN/A47.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001450|JGI24006J15134_10000570All Organisms → cellular organisms → Bacteria22643Open in IMG/M
3300002484|JGI25129J35166_1010157All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.2438Open in IMG/M
3300002514|JGI25133J35611_10025584All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.2268Open in IMG/M
3300003478|JGI26238J51125_1007486All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3139Open in IMG/M
3300003478|JGI26238J51125_1063095Not Available736Open in IMG/M
3300003690|PicViral_1000643All Organisms → cellular organisms → Bacteria15959Open in IMG/M
3300005605|Ga0066850_10304293Not Available562Open in IMG/M
3300006164|Ga0075441_10028694All Organisms → cellular organisms → Bacteria2267Open in IMG/M
3300006164|Ga0075441_10029727All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp.2224Open in IMG/M
3300006164|Ga0075441_10167230Not Available825Open in IMG/M
3300006164|Ga0075441_10171229Not Available814Open in IMG/M
3300006164|Ga0075441_10219459Not Available705Open in IMG/M
3300006190|Ga0075446_10211825Not Available540Open in IMG/M
3300006191|Ga0075447_10124270All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.880Open in IMG/M
3300006736|Ga0098033_1223647Not Available517Open in IMG/M
3300006751|Ga0098040_1001358All Organisms → cellular organisms → Bacteria10642Open in IMG/M
3300006752|Ga0098048_1102953All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.863Open in IMG/M
3300006753|Ga0098039_1004555All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → unclassified Pseudoalteromonas → Pseudoalteromonas sp.5272Open in IMG/M
3300006754|Ga0098044_1005062All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.6498Open in IMG/M
3300006754|Ga0098044_1017509All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.3254Open in IMG/M
3300006754|Ga0098044_1017577All Organisms → cellular organisms → Bacteria3248Open in IMG/M
3300006789|Ga0098054_1284863Not Available592Open in IMG/M
3300006793|Ga0098055_1029775All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.2268Open in IMG/M
3300006793|Ga0098055_1245863Not Available673Open in IMG/M
3300006856|Ga0098066_1018712All Organisms → Viruses → Predicted Viral1115Open in IMG/M
3300006923|Ga0098053_1001849All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio6113Open in IMG/M
3300006929|Ga0098036_1002705All Organisms → cellular organisms → Bacteria6302Open in IMG/M
3300006929|Ga0098036_1137105Not Available749Open in IMG/M
3300006947|Ga0075444_10092515All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → unclassified Pseudoalteromonas → Pseudoalteromonas sp.1337Open in IMG/M
3300007963|Ga0110931_1043133Not Available1363Open in IMG/M
3300008050|Ga0098052_1053137All Organisms → Viruses → Predicted Viral1739Open in IMG/M
3300008050|Ga0098052_1303181Not Available603Open in IMG/M
3300008216|Ga0114898_1008542All Organisms → Viruses → Predicted Viral4131Open in IMG/M
3300008217|Ga0114899_1049009All Organisms → Viruses → Predicted Viral1512Open in IMG/M
3300008217|Ga0114899_1284323Not Available500Open in IMG/M
3300008218|Ga0114904_1069915Not Available887Open in IMG/M
3300008219|Ga0114905_1115297All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.920Open in IMG/M
3300008219|Ga0114905_1139894Not Available814Open in IMG/M
3300008220|Ga0114910_1102903Not Available849Open in IMG/M
3300008221|Ga0114916_1065914All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.957Open in IMG/M
3300008221|Ga0114916_1088149Not Available772Open in IMG/M
3300009412|Ga0114903_1045934Not Available1035Open in IMG/M
3300009412|Ga0114903_1073997Not Available771Open in IMG/M
3300009413|Ga0114902_1077094All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.917Open in IMG/M
3300009414|Ga0114909_1088849Not Available859Open in IMG/M
3300009604|Ga0114901_1078303All Organisms → Viruses → Predicted Viral1077Open in IMG/M
3300009604|Ga0114901_1115195All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300009605|Ga0114906_1260959Not Available561Open in IMG/M
3300009620|Ga0114912_1134218Not Available582Open in IMG/M
3300009622|Ga0105173_1034903Not Available810Open in IMG/M
3300010149|Ga0098049_1017430All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.2384Open in IMG/M
3300017704|Ga0181371_1060577Not Available614Open in IMG/M
3300017705|Ga0181372_1009049All Organisms → Viruses → Predicted Viral1818Open in IMG/M
3300017706|Ga0181377_1065585Not Available667Open in IMG/M
3300017775|Ga0181432_1077911All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium965Open in IMG/M
3300017775|Ga0181432_1090733Not Available902Open in IMG/M
(restricted) 3300024518|Ga0255048_10001266All Organisms → cellular organisms → Bacteria17972Open in IMG/M
(restricted) 3300024520|Ga0255047_10465810Not Available636Open in IMG/M
3300025038|Ga0208670_103674All Organisms → cellular organisms → Bacteria2409Open in IMG/M
3300025045|Ga0207901_1008639All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.1440Open in IMG/M
3300025045|Ga0207901_1021642Not Available880Open in IMG/M
3300025046|Ga0207902_1000141All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → unclassified Pseudoalteromonas → Pseudoalteromonas sp.4826Open in IMG/M
3300025066|Ga0208012_1003964All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.3169Open in IMG/M
3300025066|Ga0208012_1005302All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.2597Open in IMG/M
3300025066|Ga0208012_1006671All Organisms → cellular organisms → Bacteria2221Open in IMG/M
3300025069|Ga0207887_1044330Not Available723Open in IMG/M
3300025071|Ga0207896_1005377All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2333Open in IMG/M
3300025071|Ga0207896_1006086Not Available2193Open in IMG/M
3300025112|Ga0209349_1079212All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.969Open in IMG/M
3300025118|Ga0208790_1000898All Organisms → cellular organisms → Bacteria13459Open in IMG/M
3300025118|Ga0208790_1027348All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.1907Open in IMG/M
3300025120|Ga0209535_1025636Not Available2881Open in IMG/M
3300025122|Ga0209434_1042849All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300025122|Ga0209434_1174559Not Available571Open in IMG/M
3300025125|Ga0209644_1001569All Organisms → Viruses4276Open in IMG/M
3300025128|Ga0208919_1000505All Organisms → cellular organisms → Bacteria26169Open in IMG/M
3300025137|Ga0209336_10179052Not Available537Open in IMG/M
3300025168|Ga0209337_1047625All Organisms → cellular organisms → Bacteria2245Open in IMG/M
3300025251|Ga0208182_1042305Not Available980Open in IMG/M
3300025264|Ga0208029_1067249Not Available707Open in IMG/M
3300025267|Ga0208179_1023853All Organisms → Viruses → Predicted Viral1628Open in IMG/M
3300025268|Ga0207894_1088820Not Available522Open in IMG/M
3300025280|Ga0208449_1107974Not Available648Open in IMG/M
3300025282|Ga0208030_1000205All Organisms → cellular organisms → Bacteria44438Open in IMG/M
3300025282|Ga0208030_1138195Not Available581Open in IMG/M
3300025286|Ga0208315_1017766All Organisms → Viruses → Predicted Viral2283Open in IMG/M
3300025293|Ga0208934_1022343Not Available1277Open in IMG/M
3300025623|Ga0209041_1039576Not Available1527Open in IMG/M
3300025623|Ga0209041_1109804All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage731Open in IMG/M
3300025676|Ga0209657_1009874All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.4416Open in IMG/M
3300025873|Ga0209757_10088530Not Available940Open in IMG/M
3300025873|Ga0209757_10285906Not Available525Open in IMG/M
3300027714|Ga0209815_1048230Not Available1559Open in IMG/M
3300027714|Ga0209815_1112976Not Available894Open in IMG/M
3300027714|Ga0209815_1120698Not Available857Open in IMG/M
3300027714|Ga0209815_1213537Not Available592Open in IMG/M
(restricted) 3300027856|Ga0255054_10624362Not Available521Open in IMG/M
(restricted) 3300027868|Ga0255053_10670624Not Available501Open in IMG/M
3300028018|Ga0256381_1007205All Organisms → cellular organisms → Bacteria1771Open in IMG/M
3300028018|Ga0256381_1022381All Organisms → Viruses → Predicted Viral1031Open in IMG/M
3300032006|Ga0310344_10000353All Organisms → cellular organisms → Bacteria36469Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine46.53%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean25.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine11.88%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.95%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.96%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.98%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.98%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.99%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.99%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume0.99%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300003478Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNAEnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006856Marine viral communities from Cariaco Basin, Caribbean Sea - 25B_WHOI_OMZ_CsClEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025038Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025293Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)EnvironmentalOpen in IMG/M
3300025623Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300027868 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_22EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24006J15134_10000570153300001450MarineMSNDYYDYVMELIYEDIDREDKKGLLNDEINQLSIEHSLDADDDREGILIKLAEQRLEESFQ*
JGI25129J35166_101015743300002484MarineMKALRLFLASTIKAGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLSKEQGLHADDDRDDIKVKIAEERLRESFYE*
JGI25133J35611_1002558433300002514MarineMKALRLFLASTIKTGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERLRESFYE*
JGI26238J51125_100748643300003478MarineMSNNYVDYILDSICQDIDREDKKGLLDDEINQLSIEHRLHPDDDREDILTKLAEQRLEESFQ*
JGI26238J51125_106309513300003478MarineMSNDYVDYVMELIYEDIDREDKKGLLDKEITQLSIEHNLHADDDRDDIKVRLAEERFEESFQ*
PicViral_1000643113300003690Marine, Hydrothermal Vent PlumeMSNDYVDYVMELIYEDIDREDKKGLLDKKIDQLSSEHSLHADDDRDDIKVKIAEQRFEESFQ*
Ga0066850_1030429323300005605MarineMKALRLFLASTIKTGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERLRESFYE*SN*
Ga0075441_1002869423300006164MarineMSNDYYDYVMDLIYEDLAVEDKKGLLVDKINEVAREHSLDVDDDRDEIITKIAEERVQESFQ*
Ga0075441_1002972743300006164MarineMSNDYVSYVMELIYQDIDSEDEKGLLDKKIDQISSEHSLHADDDRDDIKVIIAEERLEESFQ*
Ga0075441_1016723033300006164MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINKLAREHSLDADDDRDDIKVKIAEEVYEESFQ*
Ga0075441_1017122913300006164MarineVSNDYVDYVMELIYEDIDSKDNKGLLDDKINTLAKEHRLHPDDDRDDIKVKIAEEVFEESFQ*
Ga0075441_1021945943300006164MarineMSNDYVDYVMELIYEDIDREDKKGLLDKEITQLSIEHNLHADDDRDDIKVKIAE
Ga0075446_1021182523300006190MarineMSNDYYDYAMELIYQDIDSEDEKGLLDDKINTLAKEHRLHPDDDRDDIKVKIAEEVFEESFQ*
Ga0075447_1012427013300006191MarineMSNDYYDYVMDLIYEDLDAEDKKGLLVDKINEVAREHSLDVDDDRNEIITKIAEERVQESFQ*
Ga0098033_122364733300006736MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEEVYEESFQ*
Ga0098040_1001358113300006751MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINKLAKEHNLHADDDRDDIKVKIAEERVQESFQ*
Ga0098048_110295313300006752MarineKVPRLFLASTIKAGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERVRESFYE*
Ga0098039_1004555123300006753MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ*
Ga0098044_100506233300006754MarineMSNDYYDYVMELIYQDIDSEDEKGLLDEKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ*
Ga0098044_101750923300006754MarineLFLASTIKTGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERVRESFYE*
Ga0098044_101757733300006754MarineMSNNYYDYVMELIYQDIDSEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKIAEERVQESFQ*
Ga0098054_128486313300006789MarineLIYQDIDSEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKIAEERVRESFQ*
Ga0098055_102977533300006793MarineLFLASTIKAGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERVRESFYE*
Ga0098055_124586323300006793MarineMSNYYYDYVMELIYQDIDSEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKIAEERVRESFQ*
Ga0098066_101871233300006856MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHSLHADDDRDDIKVKIAEERVRESFQ*
Ga0098053_100184923300006923MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEERVRESFQ*
Ga0098036_100270573300006929MarineMSNDYYDYVMELIYQDIDDEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ*
Ga0098036_113710533300006929MarineLFLASTIKAGIDMSNDYYDYVMELIYQDIDDEDEKGLLDNKINKLAKEHSLHADDERDDIKVKIAEERLRESFYE*
Ga0075444_1009251513300006947MarineMSNNYVDYVMELIYQDIDSEDEKGLLDDKINKLAREHSLDADDDRDDIKVKIAEEVYE
Ga0110931_104313333300007963MarineMSNDYYDYVMELIYQDIDDEDEKGLLDNKINKLAKEHSLHADDDRDDIKVKIAEERVRESFYE*
Ga0098052_105313773300008050MarineSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEEVYEESFQ*
Ga0098052_130318113300008050MarineGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERVRESFYE*
Ga0114898_100854223300008216Deep OceanMSNNYVDYVMELIYQDLDSADEKGLLDEKIDQISKEHGLDADDDRDDIKVKIAEEVYEESFQ*
Ga0114899_104900953300008217Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKIAEERVRESFQ*
Ga0114899_128432313300008217Deep OceanMSNDYYDYVMELIYQDIDSEDEKGLLDEKINTLAKEHNLHADDDRDDIKVKIAEERVRESFQ*
Ga0114904_106991523300008218Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDEKINTLAKEHNLHADDDRDDIKVKIAEERVRESFQ*
Ga0114905_111529723300008219Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKSAEEVYEESFQ*
Ga0114905_113989433300008219Deep OceanMSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHAEDDRDDIKVKIAEERVQESFEGA*
Ga0114910_110290323300008220Deep OceanMSNDYYDYVMELIYRDIDSEDEKGLLDDKINTLAKEHNLHAEDDRDDIKVKIAEERVQESFQ*
Ga0114916_106591413300008221Deep OceanMSNDYYDYAMELIYQDIDSEDEKGLLDDKINKLAKEHGLDADDDRDDIKVKIAE
Ga0114916_108814933300008221Deep OceanMSNDYVDYVMELIYEDIDREDKKGLLDKEITQLSIEHNLHADDDRDDIKVKIAEQRFEESFQ*
Ga0114903_104593413300009412Deep OceanTLIIKAGIDMSNNYVDYVMELIYQDLDSADEKGLLDEKIDQISKEHGLDADDDRDDIKVKIAEEVYEESFQ*
Ga0114903_107399713300009412Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDDKINKLAKEHSLHADDDRDDIKVKIAEEVYEESFQ*
Ga0114902_107709413300009413Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDDKINKLAKEHSLHADDDRDDIKVKIAEE
Ga0114909_108884933300009414Deep OceanMSNDYYDYVMELIYRDIDSEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKIAEERVRESFQ*
Ga0114901_107830333300009604Deep OceanMSNDYYDYVMELIYRDIDSEDEKGLLDEKINTLAKEHNLHAEDDRDDIKVKIAEERVQESFQ*
Ga0114901_111519523300009604Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKIAEEVYKESFQ*
Ga0114906_126095913300009605Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDDKINKLAKEHSLHADDDRDDIKVKIAEEVYEESFQ
Ga0114912_113421823300009620Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKIAEEVYEESFQ*
Ga0105173_103490333300009622Marine OceanicLDGWREVMSNNYVDYVMELIYQDLDSADEKGLLDEKIDQISKEHNLHADDDRDDIITKIAEERVQESFQ*
Ga0098049_101743053300010149MarineMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERVRESFYE*
Ga0181371_106057733300017704MarineMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERVRESFYE
Ga0181372_100904913300017705MarineMSNDYYDYVMELIYQDIDDEDEKGLLDEKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ
Ga0181377_106558523300017706MarineLFLASTIKAGIDMSNDYYDYVMELIYQDIDDEDEKGLLDNKINKLAKEHSLHADDDRDDIKVKIAEERVRESFYE
Ga0181432_107791123300017775SeawaterMSNDYYDYVMELIYQDIDSEDEKGLLDDKINKLAKEHSLHADDDRDDIKVKIAEERVQESFQ
Ga0181432_109073333300017775SeawaterMSNDYYDYVMELIYQDIDSEDEKGLLDEKIDQISKEHGLHADDDRDDIKVKIAEEVYEESFQ
(restricted) Ga0255048_10001266233300024518SeawaterMSNDYYDYVMELIYQDIDSEDEKGLLDDKINKLAKEHSLHADDDRDDIKVKIAEEVYEESFQ
(restricted) Ga0255047_1046581023300024520SeawaterMSNNYVDYVMELIYQDLDSADEKGLLDEKIDQISKEHGLHADDDRDDIKVKIAEEVYEESFQ
Ga0208670_10367433300025038MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHSLHADDDRDDIKVKIAEERVRESFQ
Ga0207901_100863933300025045MarineMSNDYYDYAMELIYQDIDDEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ
Ga0207901_102164213300025045MarineYAMELIYQDIDSEDEKGLLEDKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ
Ga0207902_100014193300025046MarineMSNNYVDYVMDLIYQDLDSADEKGLLDDKINTLAKEHGLDADDDRDDIKVKIAEEVYEESFQ
Ga0208012_100396433300025066MarineLFLASTIKAGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERVRESFYE
Ga0208012_100530233300025066MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINKLAKEHNLHADDDRDDIKVKIAEERVQESFQ
Ga0208012_100667143300025066MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEERVRESFQ
Ga0207887_104433023300025069MarineMSNDYYDYVMDLIYEDLDAEDKKGLLGDKINEAAREHSLHVDDDRDDIITKIAEERVQESFQ
Ga0207896_100537753300025071MarineMSNDYYDYVMELIYEDIDREDKKGLLNDEINQLSIEHSLDADDDREGILIKLAEQRLEESFQ
Ga0207896_100608613300025071MarineMSNDYVSYVMELIYQDIDSEDEKGLLDKKIDQISSEHSLHADDDRDDIKVIIAEERLEESFQ
Ga0209349_107921233300025112MarineLFLASTIKAGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLSKEQGLHADDDRDDIKVKIAEERLRESFYE
Ga0208790_100089873300025118MarineMSNDYYDYVMELIYQDIDSEDEKGLLDEKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ
Ga0208790_102734823300025118MarineLFLASTIKTGIDMSNDYYDYVMELIYQDIDDEDEKGLLDSKINKLAKEQGLHADDDRDDIKVKIAEERVRESFYE
Ga0209535_102563693300025120MarineGDLMSNDYVSYVMELIYQDIDSEDEKGLLDKKIDQISSEHSLHADDDRDDIKVIIAEERLEESFQ
Ga0209434_104284923300025122MarineMSNNYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEERVRESFQ
Ga0209434_117455913300025122MarineAMSNDYYDYVMELIYQDIDSEDEKGLLDDKINKLAKEHNLHADDDRDDIKVKIAEERVQESFQ
Ga0209644_100156963300025125MarineMSNDYYDYAMELIYQDIDDEDEKGLLDDKINKLAREHGLHADDDRDDIKVKIAEERVQESFQ
Ga0208919_1000505243300025128MarineMSNDYYDYVMELIYQDIDDEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ
Ga0209336_1017905223300025137MarineMSNDYYDYVMELIYQDIDDEDEKGLLDNKINKLAKEHSLHADDDRDDIKVKIAEERLRESFYE
Ga0209337_104762533300025168MarineMSNDYYDYVMELIYQDIDDEDEKGLLDNKINKLAKEHSLHADDDRDDIKVKIAEERVRESFYE
Ga0208182_104230523300025251Deep OceanLFLTLIIKAGIDMSNNYVDYVMELIYQDLDSADEKGLLDEKIDQISKEHGLDADDDRDDIKVKIAEEVYEESFQ
Ga0208029_106724933300025264Deep OceanMSNDYYDYVMELIYRDIDSEDEKGLLDDKINTLAKEHNLHAEDDRDDIKVKIAEERVQESFQ
Ga0208179_102385373300025267Deep OceanMELIYQDLDSADEKGLLDEKIDQISKEHGLDADDDRDDIKVKIAEEVYEESFQ
Ga0207894_108882033300025268Deep OceanMSNDYYDYVMELIYQDIDSEDEKGLLDDKINTLAKEHNLHADDDRDDIKVKIAEEVYEESFQ
Ga0208449_110797423300025280Deep OceanMSNDYYDYVMELIYRDIDSEDEKGLLDEKINTLAKEHNLHADDDRDDIKVKIAEERVRESFQ
Ga0208030_1000205283300025282Deep OceanMKEPRLFLTLIIKAGIDMSNNYVDYVMELIYQDLDSADEKGLLDEKIDQISKEHGLDADDDRDDIKVKIAEEVYEESFQ
Ga0208030_113819523300025282Deep OceanMSNDYYDYVMELIYRDIDSEDEKGLLDDKINTLAKEHSLHADDDRDDIKVKIAEERVRESFQ
Ga0208315_1017766103300025286Deep OceanMSNDYYDYVMELIYQDIDDEDEKGLLDEKINTLAKEHSLHADDDRDDIKVKIAEERVRESFQ
Ga0208934_102234313300025293Deep OceanDMSNNYVDYVMELIYQDLDSADEKGLLDEKIDQISKEHGLDADDDRDDIKVKIAEEVYEESFQ
Ga0209041_103957663300025623MarineMSNNYVDYILDSICQDIDREDKKGLLDDEINQLSIEHRLHPDDDREDILTKLAEQRLEESFQ
Ga0209041_110980443300025623MarineAFPRQRQTVFYGEKKMSNDYVDYVMELIYEDIDREDKKGLLDKEITQLSIEHNLHADDDRDDIKVRLAEERFEESFQ
Ga0209657_100987493300025676MarineMSNDYVDYVMELIYEDIDREDKKGLLDKEITQLSIEHNLHADDDRDDIKVRLAEERFEESFQ
Ga0209757_1008853013300025873MarineLGGWREVMSNKYVDYVMELIYQDIDSEDEKGLLDDKINTLAKEHGLDADDDRDDIKVKIAEEVYEESFQ
Ga0209757_1028590623300025873MarineMSNDYYDYVMELIYQDIDSEDEKGLLEDKINTLAKEHNLHADDDRDDIKVKIAEERVQESFQ
Ga0209815_104823043300027714MarineVSNDYVDYVMELIYEDIDSKDNKGLLDDKINTLAKEHRLHPDDDRDDIKVKIAEEVFEESFQ
Ga0209815_111297643300027714MarineMELIYQDIDSEDEKGLLDDKINKLAKEHGLDADDDRDDIKVKIAEERVQESFQ
Ga0209815_112069823300027714MarineMSNDYYDYVMELIYQDIDSEDEKGLLDDKINKLAREHSLDADDDRDDIKVKIAEEVYEESFQ
Ga0209815_121353733300027714MarineMSNDYVDYVMELIYEDIDREDKKGLLDKEITQLSIEHNLHADDDRDDIKVKIAEQRFEESFQ
(restricted) Ga0255054_1062436233300027856SeawaterSNDYVDYVMELIYEDIDREDEKGLLDKEITQLSIEHNLHADDDRDDIKVRLAEERFEESF
(restricted) Ga0255053_1067062423300027868SeawaterMSNNYVDYVMELIYQDLDSADEKGLLDEKIDQISKEHGLDADDDRDDIKVKIAEEVYEESFQ
Ga0256381_100720513300028018SeawaterMSNDYYDYVMELIYQDIDSEDEKGLLDEKINTLAKEHNLHADDDRDDIKVKIAEERVRES
Ga0256381_102238123300028018SeawaterMSNDYYDYVMELIYQDIDSEDEKGLLDDKINKLAKEHNLHADDDRDDIKVKIAEERVRESFQ
Ga0310344_10000353183300032006SeawaterMSNDYYDYVMELIYQDIDDEDEKGLLDNKINKLAKEHNLHADDDRDDIKVKIAEERVQESFQ


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