NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103863

Metagenome / Metatranscriptome Family F103863

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103863
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 103 residues
Representative Sequence MKAKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRK
Number of Associated Samples 77
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 27.72 %
% of genes near scaffold ends (potentially truncated) 28.71 %
% of genes from short scaffolds (< 2000 bps) 77.23 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (78.218 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.822 % of family members)
Environment Ontology (ENVO) Unclassified
(29.703 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(35.644 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.48%    β-sheet: 4.72%    Coil/Unstructured: 37.80%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00072Response_reg 4.95
PF02518HATPase_c 2.97
PF09828Chrome_Resist 1.98
PF05067Mn_catalase 1.98
PF08241Methyltransf_11 0.99
PF08240ADH_N 0.99
PF13473Cupredoxin_1 0.99
PF01609DDE_Tnp_1 0.99
PF13847Methyltransf_31 0.99
PF01145Band_7 0.99
PF00293NUDIX 0.99
PF00581Rhodanese 0.99
PF14559TPR_19 0.99
PF03992ABM 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG3546Mn-containing catalase (includes spore coat protein CotJC)Inorganic ion transport and metabolism [P] 1.98
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.99
COG3293TransposaseMobilome: prophages, transposons [X] 0.99
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.99
COG5421TransposaseMobilome: prophages, transposons [X] 0.99
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.99
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A78.22 %
All OrganismsrootAll Organisms21.78 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_9264263Not Available1134Open in IMG/M
2228664021|ICCgaii200_c0409324Not Available571Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0679415Not Available1570Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_13171560Not Available741Open in IMG/M
3300000559|F14TC_101066467Not Available749Open in IMG/M
3300000787|JGI11643J11755_10539945Not Available553Open in IMG/M
3300000787|JGI11643J11755_11599075Not Available858Open in IMG/M
3300000787|JGI11643J11755_11797769Not Available1101Open in IMG/M
3300003267|soilL1_10028076Not Available1246Open in IMG/M
3300003992|Ga0055470_10019638Not Available1239Open in IMG/M
3300003996|Ga0055467_10266209Not Available543Open in IMG/M
3300003997|Ga0055466_10042606Not Available1096Open in IMG/M
3300003999|Ga0055469_10201223Not Available622Open in IMG/M
3300004145|Ga0055489_10239127Not Available573Open in IMG/M
3300004463|Ga0063356_105073836Not Available566Open in IMG/M
3300004480|Ga0062592_102100622Not Available560Open in IMG/M
3300005366|Ga0070659_100964653Not Available747Open in IMG/M
3300005535|Ga0070684_101465788Not Available643Open in IMG/M
3300005578|Ga0068854_102284933Not Available501Open in IMG/M
3300005718|Ga0068866_11445375Not Available504Open in IMG/M
3300006169|Ga0082029_1230601All Organisms → cellular organisms → Archaea1792Open in IMG/M
3300006844|Ga0075428_100154661Not Available2491Open in IMG/M
3300006844|Ga0075428_100277175Not Available1804Open in IMG/M
3300006845|Ga0075421_100090937All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis3844Open in IMG/M
3300006845|Ga0075421_101008871Not Available942Open in IMG/M
3300006846|Ga0075430_100861241Not Available747Open in IMG/M
3300006894|Ga0079215_11439365Not Available540Open in IMG/M
3300006918|Ga0079216_10242374All Organisms → cellular organisms → Archaea1023Open in IMG/M
3300006969|Ga0075419_10014286All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon4888Open in IMG/M
3300007004|Ga0079218_10548906Not Available1038Open in IMG/M
3300009081|Ga0105098_10160704Not Available1015Open in IMG/M
3300009094|Ga0111539_10715523Not Available1166Open in IMG/M
3300009100|Ga0075418_10094680All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera3174Open in IMG/M
3300009100|Ga0075418_10122674All Organisms → cellular organisms → Archaea2760Open in IMG/M
3300009146|Ga0105091_10089526Not Available1401Open in IMG/M
3300009146|Ga0105091_10745948Not Available516Open in IMG/M
3300009147|Ga0114129_10134825Not Available3388Open in IMG/M
3300009156|Ga0111538_11676051Not Available801Open in IMG/M
3300009157|Ga0105092_10200337Not Available1115Open in IMG/M
3300009168|Ga0105104_10009510Not Available6237Open in IMG/M
3300009168|Ga0105104_10051075All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus oleophilus2254Open in IMG/M
3300009168|Ga0105104_10354583Not Available811Open in IMG/M
3300010375|Ga0105239_12474363Not Available605Open in IMG/M
3300010399|Ga0134127_10682833All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae1065Open in IMG/M
3300010399|Ga0134127_12669447Not Available579Open in IMG/M
3300010403|Ga0134123_13227157Not Available525Open in IMG/M
3300011332|Ga0126317_10531866All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera1776Open in IMG/M
3300011332|Ga0126317_10632711Not Available699Open in IMG/M
3300011332|Ga0126317_10995122Not Available528Open in IMG/M
3300011333|Ga0127502_10650805Not Available721Open in IMG/M
3300012883|Ga0157281_1010298Not Available1029Open in IMG/M
3300012897|Ga0157285_10176795Not Available654Open in IMG/M
3300012897|Ga0157285_10188399Not Available640Open in IMG/M
3300012943|Ga0164241_10937266Not Available634Open in IMG/M
3300014265|Ga0075314_1043085Not Available870Open in IMG/M
3300014301|Ga0075323_1007585Not Available1730Open in IMG/M
3300014311|Ga0075322_1069230Not Available791Open in IMG/M
3300014314|Ga0075316_1189133Not Available538Open in IMG/M
3300015077|Ga0173483_10031301Not Available1940Open in IMG/M
3300015077|Ga0173483_10554610Not Available623Open in IMG/M
3300015371|Ga0132258_12052893Not Available1437Open in IMG/M
3300015371|Ga0132258_12537529Not Available1281Open in IMG/M
3300015372|Ga0132256_101439902Not Available800Open in IMG/M
3300015373|Ga0132257_102382537Not Available687Open in IMG/M
3300015373|Ga0132257_104322627Not Available517Open in IMG/M
3300018067|Ga0184611_1117992Not Available929Open in IMG/M
3300018073|Ga0184624_10117176All Organisms → cellular organisms → Archaea1151Open in IMG/M
3300018432|Ga0190275_10009114All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota7290Open in IMG/M
3300018432|Ga0190275_10011829All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae6498Open in IMG/M
3300018469|Ga0190270_10041175All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae3122Open in IMG/M
3300018469|Ga0190270_10085084All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus2362Open in IMG/M
3300018476|Ga0190274_10919946Not Available943Open in IMG/M
3300018481|Ga0190271_10058572All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae3329Open in IMG/M
3300018481|Ga0190271_10137504Not Available2333Open in IMG/M
3300018481|Ga0190271_13612055Not Available518Open in IMG/M
3300019356|Ga0173481_10013545Not Available2358Open in IMG/M
3300019356|Ga0173481_10246549Not Available802Open in IMG/M
3300022883|Ga0247786_1011474All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus1639Open in IMG/M
3300025537|Ga0210061_1034425Not Available843Open in IMG/M
3300025559|Ga0210087_1007184Not Available2461Open in IMG/M
3300025792|Ga0210143_1000175All Organisms → cellular organisms → Archaea13986Open in IMG/M
3300025792|Ga0210143_1002201All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon4324Open in IMG/M
3300025795|Ga0210114_1001278All Organisms → cellular organisms → Archaea6469Open in IMG/M
3300025795|Ga0210114_1069874Not Available717Open in IMG/M
3300025932|Ga0207690_11416582Not Available581Open in IMG/M
3300026075|Ga0207708_10217938All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon1528Open in IMG/M
3300026535|Ga0256867_10009506Not Available4260Open in IMG/M
3300027552|Ga0209982_1021438Not Available995Open in IMG/M
3300027636|Ga0214469_1208290Not Available533Open in IMG/M
3300027743|Ga0209593_10005115Not Available5464Open in IMG/M
3300027743|Ga0209593_10015426All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus3125Open in IMG/M
3300027880|Ga0209481_10064241Not Available1724Open in IMG/M
3300027909|Ga0209382_10573488All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Arcobacteraceae → Poseidonibacter → Poseidonibacter lekithochrous1232Open in IMG/M
3300027909|Ga0209382_10768986Not Available1029Open in IMG/M
3300028578|Ga0272482_10163556Not Available666Open in IMG/M
3300031091|Ga0308201_10424456Not Available505Open in IMG/M
3300031229|Ga0299913_10971977Not Available816Open in IMG/M
3300031562|Ga0310886_10393935Not Available815Open in IMG/M
3300031944|Ga0310884_10140487Not Available1235Open in IMG/M
3300032012|Ga0310902_10536790Not Available768Open in IMG/M
3300032013|Ga0310906_10024704Not Available2638Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.82%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.86%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands10.89%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment8.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.93%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.96%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands3.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.98%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.98%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003992Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1EnvironmentalOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300014265Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2EnvironmentalOpen in IMG/M
3300014301Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1EnvironmentalOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014314Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2EnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300025537Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025559Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025795Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300027552Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027636Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeqEnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028578Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPICI_022302602088090015SoilMKTKNVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAISVGSMVINDVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLLMDXWIIYGFKKKESVIRP
ICCgaii200_040932412228664021SoilMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLTQKGYPKTEFLGISAFSYEYASVFTAILGTFILTGGL
ICChiseqgaiiDRAFT_067941523300000033SoilMKTKNVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAISVGSMVINDVVNNKLTPQGYPETQFLGISAFSYEYGXVFTSILGXXVFFGGLXMDSXKKXSVIRP*
ICChiseqgaiiFebDRAFT_1317156013300000363SoilLNSKNTLNVLHSSKQRKAVIITGAILLIVGFIGAVTIGTMVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKKKEN*
F14TC_10106646713300000559SoilMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLSQKGYPKTEFLGISAFSYEYASVFTAILGTFI
JGI11643J11755_1053994513300000787SoilCISYIRNEVDSHILNSKNTLNVLHSSKQRKAVIITGAILLIVGFIGAVTIGTMVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKKKEN*
JGI11643J11755_1159907523300000787SoilMKTKNVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAISVGSMVINDVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKKKV*
JGI11643J11755_1179776923300000787SoilMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLTQKGYPKTEFLGISAFSYEYASVFTAILGTFILTGGLFGMDSKKKSPENLT*
soilL1_1002807613300003267Sugarcane Root And Bulk SoilMCGLKNTSTALTLFGLHYLRKRRVVIIIGAVLMTLGFFGAILVGSIVINDVVNNKLTPQGYPETQFLGISAYSYEYGLALTSALGVFIFFGGLFMDSKRQKQGLTK*
Ga0055470_1001963813300003992Natural And Restored WetlandsMKAKNALNGSTLGILHYIKQRKVVIIIGAILLILGFIGAVIIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYGTVFTAILGM
Ga0055467_1026620913300003996Natural And Restored WetlandsLKSKNALTALPFTFSRKIVIIIGAILLIVGFIGALTIGTIVINDAVNNNLTPQSYPKSEFLGISAFSYEYGAVFTAILGMFILIGGLFGMDSKKEKERLKNLKT*
Ga0055466_1004260613300003997Natural And Restored WetlandsMKAKNALNGSTLGILHYIKQRKVVIIIGAILLILGFIGAVIIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYGTVFTAILGMFVLTGGLFGMDSKKAKEKKLKDSYV*
Ga0055469_1020122313300003999Natural And Restored WetlandsQRKVVIIIGAILLILGFIGAVIIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYGTVFTAILGMFVLTGGLFGMDSKKAKEKKLKDSYV*
Ga0055489_1023912713300004145Natural And Restored WetlandsKYYIKFLTYYCIMKTKNALNASSLGILHYIKQRRVIIIIGAVLMTIGFFGAIAVGSIVINNVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKSVIRP*
Ga0063356_10507383613300004463Arabidopsis Thaliana RhizosphereLKSKNTLTALHYSKQRKIVIIIGAVLLILGFIAAVKIGTIVINDTVSNNLTPQGYPKTEFLGISAFSYEYASVFTAVLGMFVLIGGLFGMDSKSKEN*
Ga0062592_10210062213300004480SoilMKAKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLF
Ga0070659_10096465313300005366Corn RhizosphereSGSSLGILHYIKQRKVVIIIGAILLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRK*
Ga0070684_10146578813300005535Corn RhizosphereMKAKNALSGSSLGILHYIKQRKVVIIIGAILLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRK*
Ga0068854_10228493313300005578Corn RhizosphereYIKQRKVVIIIGAILLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRK*
Ga0068866_1144537513300005718Miscanthus RhizosphereMKAKNALSGSSLGILHYIKQRKVVIIIGAILLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRK*HCYL*NE
Ga0082029_123060113300006169Termite NestMISTFISNSYKKYCVYIIIMRVKNTSTALSLFSLHYLKQRRIIIIIGAVLLVGGFFAAVTIGSIVINDTANNRMTPQGYPETNFLGISAFSFEYASVFTAILGVFVLSGGILMDSKKKGLKK*
Ga0075428_10015466113300006844Populus RhizosphereMKAKHVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAIAVGSMVINDVVNNKLTPQGYPDTQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKNESVIRP*
Ga0075428_10027717523300006844Populus RhizosphereMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLTQKGYPKTEFLGISAFSYEYASVFTAILGTFILSGGLFGMDSKKKSPADLT*
Ga0075421_10009093713300006845Populus RhizosphereMKAKHVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAIAVGSMVINDVVNNKLTPQGYPDTQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKNESVIIP*
Ga0075421_10100887123300006845Populus RhizosphereMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLTQKGYPKTEFLGISAFSYEYASVFTAILGTFIL
Ga0075430_10086124123300006846Populus RhizosphereMSFKYYIKFLTYYCIMKAKNVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAIAVGSMVINDVVNNKLTPQGYPDTQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKNESVIIP
Ga0079215_1143936513300006894Agricultural SoilILMKAKNVLNASTFSILYYIKQRKIVIIIGAVLFTIGTIVAIIIGHLVINDTVNNNLTPLGYPKTEFLGISAFSYEYASVFTAILGLFVLAGGVVGMDSKKKEKTYTK*
Ga0079216_1024237423300006918Agricultural SoilLKVKNTLNSSITIFHYLRQRKIVIIIGAVLFTIGLIGAIIIGTIVINDTANNRLTANGYPETEFLGISAFSYEYAFVFTTILGLFVLSGGLFGMDSKKKIKLQK*
Ga0075419_1001428673300006969Populus RhizosphereMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLTQKGYPKTEFLGISAFSYEYASVFTAILGTFILSGGLFGMDSKKKSPGDLT*
Ga0079218_1054890633300007004Agricultural SoilLKAKNPLNASITIFHYLRQRKIVIIIGAVLFTIGLIGAIIIGTIVINDTANNRLTANGYPETEFLGISAFSYEYAFVFTTILGLFVLSGGLFGMDSKKKNKLEK*
Ga0105098_1016070423300009081Freshwater SedimentLKFKNNLTALHSSKQRKTVIIIGAVLLIIGFFGAVTIGTFVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKSKENSE*
Ga0111539_1071552313300009094Populus RhizosphereMKAKNALSGSSLGILHYIKQRKVVIIIGAILLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDPKRK*
Ga0075418_1009468033300009100Populus RhizosphereMKAKNVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAIAVGSMVINDVVNNKLTPQGYPDTQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKNESVIRP*
Ga0075418_1012267463300009100Populus RhizosphereVNNSNEFNICISDIRNEVNSYIVKFKNNLTALHSSKRRKTVIIIGAFLLIIGFIGAVTIGTFVISDTANNNLTPQGYPKTEFLGISAFSYEYASVFTAVLGMFVLIGGLFGMDSKSK
Ga0105091_1008952613300009146Freshwater SedimentMKGKNVLNASSLGILHYIKQRRVIIIIGAVLMTIGSFGAIAVGSMVINDVVNNKLTAQGYPETQFLGISAFSYEYGLVFTTILGVFVFFGGLFMDSKKEKSVIRP*
Ga0105091_1074594813300009146Freshwater SedimentMKAKNALNASSLSILHYIKLRRVIIIIGAVLMIIGFFGAIAVGSIVINDVVNNRLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSEKKKSVIRP*
Ga0114129_1013482553300009147Populus RhizosphereMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFVGAVTIGTIVINDTVNNNLTQKGYPKTEFLGISAFSYEYASVFTAILGTFILSGGLFGMDSKKKNPADLT*
Ga0111538_1167605113300009156Populus RhizosphereMKAKNVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAIAVGSMVINDVVNNKLTPQGYPDTQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKK*
Ga0105092_1020033713300009157Freshwater SedimentMKGKNVLNASSLGILHYIKQRRVIIIIGAVLMTIGSFGAIAVGSMVINDVVNNKLTPQGYPETQFLGISAFSYEYGLVFTTILGVFVFFGGLFMDSKKEKSVIRP*
Ga0105104_1000951043300009168Freshwater SedimentMKAKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNNSLTPQGYPETQFLGTSAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKV*
Ga0105104_1005107543300009168Freshwater SedimentLKSKNTLTALHYSKQRKIVIIIGAALLILGFIAAVKIGTMVINDTVNNNLTPQGYPKTEFLGISAFSYEYASVFTAVLGMFVLIGGLFGMDSKSKEN*
Ga0105104_1035458313300009168Freshwater SedimentMKAKNALNASSLGILHYIKLKRVIIIIGAILMTIGFFGAITVGSIVINDVVNNRLTPQGYPETQFLGISAFSYEYGLVFTSILGLYVFFGGLFMDSKKEKDVIRR*
Ga0105239_1247436313300010375Corn RhizosphereMKAKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNMTQKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGIFMDSKRKEQNYV*
Ga0134127_1068283313300010399Terrestrial SoilLKSKNTLTALHYSKQRKIVIIIGAALLIRGFIAAVKIGTMVINDTVNNNLTPQGYPITEFLGISAFSYEYASVFTAVLGMFVLIGGLFGMDSKSKEN*
Ga0134127_1266944713300010399Terrestrial SoilMKPKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVSNSLTPQGYPETQFLGISAFSYEYALVFTSILGLFVFFGGLFMDSKKKKSVIRR*
Ga0134123_1322715713300010403Terrestrial SoilMKAKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRK*
Ga0126317_1053186633300011332SoilVLSGSTLGILHYSKQRKTVIIIGAVLLILGFIGAVTIGTIVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKRKEN*
Ga0126317_1063271113300011332SoilKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNMTQKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGIFMDSKRK*
Ga0126317_1099512213300011332SoilLNSKNTLNVLHNSRQRKTVIIIGAILLILGFIGAVTIGTMVINDTANNNLTPQGYPKTEFLGISAFSYQYGSVFTAILGMFVLIGGLIGMDSKRKEN*
Ga0127502_1065080513300011333SoilMKAKNALTASSLSGLYYLKQRKVIIILGAVLLAIGFFGAISIGSIVINDTANNKLTPQGYPETQFLGISAFSYEYASVFTAILGVFVLFGGLVGMDSKKKKSVIRP*
Ga0157281_101029823300012883SoilMKAKNALSGSSLGILHYIKQRRVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRKEQNYV*
Ga0157285_1017679513300012897SoilMKAKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRKEQNYV*
Ga0157285_1018839913300012897SoilMMKAKNTSTAFTLTGLHYLKQRRIIIIIGAILLAGGFFAAITIGTIVINDTVNNNMTQKGYPKTEFLGISAYSYEYASVFTAILGLFVFFGGIFMDSKRKNNS*
Ga0164241_1093726613300012943SoilMKAKNALNASSLGILHYIKLRRVIIIIGAVLMTIGFFGAIAVGSMVINDVVNNRLTPLGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLLMDSEKKKKV*
Ga0075314_104308513300014265Natural And Restored WetlandsMKTKNALNSSSLSILHYIKQRRVIIIIGAVLMTIGFFGAIAVGSIVINNVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKKKV*
Ga0075323_100758513300014301Natural And Restored WetlandsMKTKNALNASSLGILHYIKQRRVIIIIGAVLMTIGFFGAIAVGSIVINNVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKSVIRP*
Ga0075322_106923013300014311Natural And Restored WetlandsMKAKNALNASSLGILHYIKQRRVIIIIGAVLMTIGFFGAIAVGSIVINNVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKV*
Ga0075316_118913313300014314Natural And Restored WetlandsLNSKNTLNVLHYSRQRKIAIIIGAILLIIGFIGAVTIGTMVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKKKEN*
Ga0173483_1003130133300015077SoilMKAKNTSTAFTLTGLHYLKQRRIIIIIGAILLAGGFFAAITIGTIVINDTVNNNMTQKGYPKTEFLGISAYSYEYASVFTAILGLFVFFGGMFMDSKRKNNT*
Ga0173483_1055461013300015077SoilMKAKNALNASSLGILHYIKLRRVIIIIGAVLMTIGFFGAIAVGSMVINDVVNNRLTPLGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKV*
Ga0132258_1205289313300015371Arabidopsis RhizosphereMYKFKNTSTAFSLFGLRYLKQRRIVIIIGSLLMTLGFFGAIAVGSIVINDGANNKITSQGYPETQFFGISAYSYEYGLVFTTILGVFVFFGGLLMDSKKTNQNLTK*
Ga0132258_1253752923300015371Arabidopsis RhizosphereMSNIKNTSTALSLSSSHYLKKRRVVIIIGAALMTLGFFGAISVGSIVINDGVNNKVTSQGYPETQFLGISAYSYEYGLIFTAILGMFIFFGGLLMDSQKKNQN*
Ga0132256_10143990213300015372Arabidopsis RhizosphereMKAKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNNSLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFM
Ga0132257_10238253713300015373Arabidopsis RhizosphereNALSGSSLGILHYIKQRKVVIIIGAILLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRK*
Ga0132257_10432262713300015373Arabidopsis RhizosphereMKAKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNNSLTPQGHPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSK
Ga0184611_111799213300018067Groundwater SedimentLKFKNNPTALHSSKQRKTVIIIGAVLLIIGFFGAVTIGTFVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFEWIQRVKKTQNNLNYIIK
Ga0184624_1011717613300018073Groundwater SedimentKQRKTVIIIGAVLLIIGFFGAVTIGTFVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFEWIQRVKKTQNNLNYIIK
Ga0190275_1000911453300018432SoilLKIKNNLTALHYSKQRKTVIIIGAVLLIIGFIGAVTIGTFVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKSKEN
Ga0190275_1001182933300018432SoilMKGKNVLNASSLGILHYIKQRRVIIIIGAVLMTIGSFGAIAVGSMVINDVVNNKLTPQGYPETQFLGISAFSYEYGLVFTTILGVFVFFGGLFMDSKKEKSVIRP
Ga0190270_1004117513300018469SoilLKIKNNLTALHYSKQRKTVIIIGAVLLIIGFIGAVTIGTFVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKRKQN
Ga0190270_1008508433300018469SoilTYYFIMKAKNALNASSLGILHSINQRRVIIIIGAVLMTIGFFGAIAVGSIVINNVVNNKLTPQGYPETQFLGISAFSYEYGLVFTFILGLFVFFGGLFMDSKKKKSVIHP
Ga0190274_1091994613300018476SoilLKIKNNLTALHYSKQRKTVIIIGAVLLIIGFIGAVTIGTFVINDTSNNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKSKEN
Ga0190271_1005857233300018481SoilLKIKNNLTALHYSKQRKTVIIIGAVLLIIGFIGAVTIGTFVINDTANNNLTPQGYPKTEFLGISAFSYEYGSVFTAVLGMFVLIGGLFGMDSKRKEN
Ga0190271_1013750423300018481SoilMKAKNILNASSLGILHYIKLRRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNYSLTPQGYPETQFLGISAFSFEYGIVFTSILGLFVFFGGLFMDSKKKKSVIRG
Ga0190271_1361205513300018481SoilVIIIGAVLFTIGTIAAITIGHLVINDSVNNNLTPLGYPKTEFLGISAFSYEYASVFTAILGLFVLAGGLVGMDSKKKEKTYTK
Ga0173481_1001354533300019356SoilMKAKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRKEQNYV
Ga0173481_1024654923300019356SoilMMKAKNTSNAITLTSLHYLKQRRIIIIIGAILLAGGFFAAITIGTIVINDTVNNNLTQKSYPKTEFLGISAYSYEYASVFTAILGLFVFFGG
Ga0247786_101147433300022883SoilMKAKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRKEQNYVXNEXNTIS
Ga0210061_103442513300025537Natural And Restored WetlandsMTKLQHLYKXYKKXKRFIHIMKAKNALNGSTLGILHYIKQRKVVIIIGAILLILGFIGAVIIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYGTVFTAILGMFVLTGGLFGMDSKKAKEKKLKDSYV
Ga0210087_100718433300025559Natural And Restored WetlandsKYYIKFLTYYCIMKTKNALNASSLGILHYIKQRRVIIIIGAVLMTIGFFGAIAVGSIVINNVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKSVIRP
Ga0210143_1000175193300025792Natural And Restored WetlandsMKTKNALNASSLGILHYIKQRRVIIIIGAVLMTIGFFGAIAVGSIVINNVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKV
Ga0210143_100220143300025792Natural And Restored WetlandsMKAKNALNGSTLGILHYIKQRKVVIIIGAILLILGFIGAVIIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYGTVFTAILGMFVLTGGLFGMDSKKAKEKKLKDSYV
Ga0210114_100127823300025795Natural And Restored WetlandsMKTKNALNASSLGILHYIKQRRVIIIIGAVLMTIGFFGAIAVGSIVINNVVNNKLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKSVIRP
Ga0210114_106987413300025795Natural And Restored WetlandsQRKVVIIIGAILLILGFIGAVIIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYGTVFTAILGMFVLTGGLFGMDSKKAKEKKLKDSYV
Ga0207690_1141658223300025932Corn RhizosphereMKAKNALSGSSLGILHYIKQRKVVIIIGAILLILGFVAAVTIGTIVINDTVNNNLTPKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRK
Ga0207708_1021793823300026075Corn, Switchgrass And Miscanthus RhizosphereMKAKNALSGSSLGILHYIKQRKVVIIIGAVLLILGFVAAVTIGTIVINDTVNNNMTQKGYPKTEFLGISAFSYEYASVFTTILGVFVFFGGLFMDSKRKXHCYLXNEXMPSLKNKTSLNKYGKISCLS
Ga0256867_1000950613300026535SoilMKSSKNVLNASTLSILYYIKQRKVIIIIGAVLLTIGTIAAVTIGHIVINDSVDNNLTPQGYPATEFLGISAFSYEYGSVFTAILGLFILSGGIIGMDSKKEGKKLTK
Ga0209982_102143833300027552Arabidopsis Thaliana RhizosphereMDILERVWLQLTLSFKYYIKFLTYYCIMKAKNVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAIAVGSMVINDVVNNKLTPQGYPDTQFLGVSAFSYEYGLVFTSILGVFVFFGGLFMDSKKKKV
Ga0214469_120829013300027636SoilLSQSDIRNKVDIVYRLMKAKNVLNASTFSILHYLKQRKVVIIIGAVLFTIGTIAAITIGHLVINDSVNNRMTSQGYPETEFLGISAFSYEYGSVFTAILGLFVLAGGLVGMDSKKKEKTYTK
Ga0209593_1000511533300027743Freshwater SedimentMKAKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNNSLTPQGYPETQFLGTSAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKV
Ga0209593_1001542623300027743Freshwater SedimentLKSKNTLTALHYSKQRKIVIIIGAALLILGFIAAVKIGTMVINDTVNNNLTPQGYPKTEFLGISAFSYEYASVFTAVLGMFVLIGGLFGMDSKSKEN
Ga0209481_1006424113300027880Populus RhizosphereMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLTQKGYPKTEFLGISAFSYEYASVFTAILGTFILSGGLFGMDSKKKSPADLT
Ga0209382_1057348823300027909Populus RhizosphereMSFKYYIKFLTYYCIMKAKNVLNASSLGILHYIKQRRVIIIIGAILMTVGSFGAIAVGSMVINDVVNNKLTPQGYPDTQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKNESVIRP
Ga0209382_1076898623300027909Populus RhizosphereMKAKNALSGSTLGILHYIKQRKVVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLTQKGYPKTEFLGISAFSYEYASVFTAILGTFILTGGLFGMDSKKKSPENLT
Ga0272482_1016355613300028578SoilMKSSKNVLNASTLSILYYIKQRKVIIIIGAVLLTIGTITAVTIGHIVINDSVNNNLTPQGYPATEFLGISAFSYEYGSVFTAILGLFILSGGIIGMDSKKEGKKLTK
Ga0308201_1042445613300031091SoilKNSISGSTLGILHYIKQRKFVIIIGAVLLILGFIGAVTIGTIVINDTVNNNLSQKGYPKTEFLGISAFSYEYASVFVTILGVYVLAGGLFGMDSKKEKERKAKMHF
Ga0299913_1097197733300031229SoilAKNVLNASTFSILHYLKQRKVVIIIGAVLFTIGTIAAITIGHLVINDSVNNRMTSQGYPETEFLGISAFSYEYGSVFTAILGLFVLAGGLVGMDSKKKEKTYTK
Ga0310886_1039393513300031562SoilMKAKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNNSLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKNESVIIP
Ga0310884_1014048713300031944SoilMKAKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNNSLTPQGYPETQFLGISAFSYEYGLVFTSILGVFVFFGGLFMDSKKNESVIIP
Ga0310902_1053679013300032012SoilMKAKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNNSLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGG
Ga0310906_1002470423300032013SoilMKAKNVLNASSLGILHYIKLKRVIIIVGAVLMTVGSFGAIAVGSIVINDVVNNSLTPQGYPETQFLGISAFSYEYGLVFTSILGLFVFFGGLFMDSKKKKSVIRR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.