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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F103849 |
| Family Type | Metagenome |
| Number of Sequences | 101 |
| Average Sequence Length | 50 residues |
| Representative Sequence | GVGVGASGRADGEAAIVVYVNKDAGNRPFLPDSIEGIPVTVILTDQFIAR |
| Number of Associated Samples | 86 |
| Number of Associated Scaffolds | 101 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 1.98 % |
| % of genes near scaffold ends (potentially truncated) | 91.09 % |
| % of genes from short scaffolds (< 2000 bps) | 87.13 % |
| Associated GOLD sequencing projects | 79 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.49 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (53.465 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.881 % of family members) |
| Environment Ontology (ENVO) | Unclassified (41.584 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (68.317 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 20.51% Coil/Unstructured: 79.49% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.49 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 101 Family Scaffolds |
|---|---|---|
| PF01381 | HTH_3 | 44.55 |
| PF13560 | HTH_31 | 6.93 |
| PF00912 | Transgly | 5.94 |
| PF12844 | HTH_19 | 2.97 |
| PF00850 | Hist_deacetyl | 1.98 |
| PF07993 | NAD_binding_4 | 0.99 |
| PF00072 | Response_reg | 0.99 |
| PF10543 | ORF6N | 0.99 |
| PF00805 | Pentapeptide | 0.99 |
| PF08192 | Peptidase_S64 | 0.99 |
| PF00581 | Rhodanese | 0.99 |
| PF00689 | Cation_ATPase_C | 0.99 |
| PF02894 | GFO_IDH_MocA_C | 0.99 |
| PF00565 | SNase | 0.99 |
| COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
|---|---|---|---|
| COG0744 | Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase | Cell wall/membrane/envelope biogenesis [M] | 5.94 |
| COG4953 | Membrane carboxypeptidase/penicillin-binding protein PbpC | Cell wall/membrane/envelope biogenesis [M] | 5.94 |
| COG5009 | Membrane carboxypeptidase/penicillin-binding protein | Cell wall/membrane/envelope biogenesis [M] | 5.94 |
| COG0123 | Acetoin utilization deacetylase AcuC or a related deacetylase | Secondary metabolites biosynthesis, transport and catabolism [Q] | 3.96 |
| COG0474 | Magnesium-transporting ATPase (P-type) | Inorganic ion transport and metabolism [P] | 0.99 |
| COG0673 | Predicted dehydrogenase | General function prediction only [R] | 0.99 |
| COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats | Function unknown [S] | 0.99 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 53.47 % |
| All Organisms | root | All Organisms | 46.53 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 11.88% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 9.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 8.91% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 4.95% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 4.95% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 4.95% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 3.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 3.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.96% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 2.97% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.97% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.97% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.97% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.97% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.97% |
| Termite Nest | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest | 1.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.98% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.99% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.99% |
| Switchgrass Rhizosphere Bulk Soil | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.99% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.99% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.99% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2162886011 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000787 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000953 | Soil microbial communities from Great Prairies - Kansas Corn soil | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005280 | Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil | Host-Associated | Open in IMG/M |
| 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
| 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
| 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
| 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
| 3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
| 3300006169 | Termite nest microbial communities from Madurai, India | Environmental | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006918 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 | Environmental | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
| 3300010037 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25 | Environmental | Open in IMG/M |
| 3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
| 3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
| 3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012913 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2 | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015201 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2) | Environmental | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027639 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes) | Environmental | Open in IMG/M |
| 3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
| 3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
| 3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| MRS1b_0231.00000380 | 2162886011 | Miscanthus Rhizosphere | MGVGVGESGRADGEAAIIVYVNRDSGSRPILPDSIEGIPVVLFLTDQFVAR |
| INPhiseqgaiiFebDRAFT_1007200231 | 3300000364 | Soil | AVIGAGVGASGRTDGEAAIVVYVNKNAGAKPVLPDSLDGVPLVVVYTDEFIAF* |
| JGI11643J11755_113877611 | 3300000787 | Soil | IGVSGREDGEAGIVIYVNKDSQARPPLPDSIDGIPVVVILTDQFIAY* |
| JGI11615J12901_100524961 | 3300000953 | Soil | GVIGAGVGASGRADGEAAIVIYVNKDSSARPILPDNLEGIPVTVVLTDQFIAR* |
| JGI1027J12803_1085642012 | 3300000955 | Soil | IVIYVNKDSSARPILPDNLEGIPVMVILTDPFIAR* |
| Ga0062595_1003263291 | 3300004479 | Soil | MGVGVGLSDRADGEGAIVVYVNKDSADKPFLPDSIEGIPVRVVLTDQFVAR* |
| Ga0062592_1018086862 | 3300004480 | Soil | GIGAGRTDGEAAIVIYVNKNAEQRPVLPDNIDGIPLTVVLTDQFIAF* |
| Ga0065696_13974981 | 3300005280 | Switchgrass Rhizosphere Bulk Soil | IGASNRADGEAAIVLYVNKDSGNRPNLPDSIDGIPVVVVLTDEFIAR* |
| Ga0065712_104024301 | 3300005290 | Miscanthus Rhizosphere | MFQPGVIGAGIGAGRTDNEAAIVIYVNKESGQRPILPNDIEGIPVIVVLTDPFIAF* |
| Ga0065712_107416561 | 3300005290 | Miscanthus Rhizosphere | GVGASNRADGEAAIVIYVDKDSANRPNLPDSIDGIPVTVVLTDQFIAR* |
| Ga0070676_107276152 | 3300005328 | Miscanthus Rhizosphere | VGMSGRSDGEAAIVVYVNKNAGNKPILPDELEGVPVTVILTDEFIAR* |
| Ga0066388_1039827041 | 3300005332 | Tropical Forest Soil | FQPGVMGAGVGLSGRADGEAAIVIYVNKNGQKPFLPDNIEGIPVTVILTDQFIAF* |
| Ga0070677_104079961 | 3300005333 | Miscanthus Rhizosphere | GEAAIVIYVNKNAEQRPVLPDNIEGIPLTVVLTDQFIAF* |
| Ga0070682_1000449251 | 3300005337 | Corn Rhizosphere | MGAGVGASDRADGEAVIVLYVNKNSGNRPNLPDSIDGIPVTVVLTDEFIAR* |
| Ga0070687_1005636841 | 3300005343 | Switchgrass Rhizosphere | PGVIGAGIGAGRTDNEAAIVIYVNKESGQRPILPNDIEGIPVIVVLTDPFIAF* |
| Ga0070692_110878562 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | ASGRADGEAAIVIYVNKDSSARPVLPDNLEGIPVTVILTDQFIAR* |
| Ga0070700_1000002953 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MVPIARGIGAGRTDNEAAIVIYVNKDAAQRPILPDDIEGVPVTVILTDQFIAR* |
| Ga0070700_1018937052 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | DGVAAIVVYVNKDSARPFLPDDIEGIPVTVVVTDQFIAR* |
| Ga0070694_1009126081 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | ASNRADGEAAIVIYVDKDSANRPNLPDSIDGIPVTVVLTDQFIAR* |
| Ga0070694_1015597062 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | GVMGAGIGLSGRADGEAAIIIYVNKDSGAQPILPDSIEGIPVNVVLTDQFIAR* |
| Ga0068853_1019674201 | 3300005539 | Corn Rhizosphere | TDGEAAIVVYVNKDAGQKPILPYSIEGLPVTVVLTDEFIAR* |
| Ga0070672_1013463502 | 3300005543 | Miscanthus Rhizosphere | VMGVGVGASGRTDGEAAIVIYVNKDAGQKPILPDSIEGIPVTVVLTDEFIAR* |
| Ga0070695_1006822292 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | QPGVMGVGVGLGRTDNEASIVIYVNKDAGTQPVLPDNIEGIPVTVILTDQFIAR* |
| Ga0070695_1010529411 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | GVIGAGVGLGRTDGEAAIVIYVNKNAGNKPILPDDIEGIPVTVILTDEFIAR* |
| Ga0070696_1009993231 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | SGRADGEAAIVIYVNKDSSARPVLPDNLEGIPVTVILTDQFIAR* |
| Ga0070696_1017471432 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | NEASIVVYVNKDSAAKPFLPDNLEGIPVTVILTDQFIAR* |
| Ga0070664_1006438071 | 3300005564 | Corn Rhizosphere | DNEAAIVLYVNKNSANRPNLPDSIDGVPVTVVLTDEFIAR* |
| Ga0068857_1015912362 | 3300005577 | Corn Rhizosphere | GRADGEAAIIIYVNKDSGAQPILPDSIEGIPVNVILTDQFIAR* |
| Ga0070702_1001095444 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | SGRADGEAAIVIYVNKDAQTKPPLPDSIDGIPVTVILTDQFIAR* |
| Ga0068864_1000429576 | 3300005618 | Switchgrass Rhizosphere | AGIGLSGRADGEAAIIIYVNKDSGAQPILPDSIEGIPVNVILTDQFIAR* |
| Ga0068870_102351633 | 3300005840 | Miscanthus Rhizosphere | LENHRANLMFQPGVMGVGVGASGRTDGEASIVIYVNKDAGQKPILPDSIEGIPVTVVLTDEFIAR* |
| Ga0068870_104750842 | 3300005840 | Miscanthus Rhizosphere | VIGAGVGASNRAEGEAAIVIYVDKDSANRPNLPDSIDGIPVTVILTDQFIAR* |
| Ga0075417_105666272 | 3300006049 | Populus Rhizosphere | NCCVRVGNHEHLMFQPGVMGVGVGLGRTDTQAAIVIYVNKDSGAQPVLPTDIEGIPVTVILTDQLRAR* |
| Ga0082029_16226873 | 3300006169 | Termite Nest | RADGEAAIVIYVNKDSSARPVLPDNIEGIPVTVILTDQFIAR* |
| Ga0082029_17592961 | 3300006169 | Termite Nest | QPGVIGAGIGAGRTDGEAAIVIYVNKNAEQKAFLPDNIEGIPVTVVLTDQFIAF* |
| Ga0075421_1001192765 | 3300006845 | Populus Rhizosphere | DGEAAIIVFVNKNASQRPFVPESIDGVPVTVILTDEFVAR* |
| Ga0075430_1005421441 | 3300006846 | Populus Rhizosphere | GIGESGRADGEAAIIVFVNKNAGQRPFVPESIDGVPVTVILTDEFVAR* |
| Ga0075431_1003274724 | 3300006847 | Populus Rhizosphere | MFQPGVMGVGVGLSGRADGEGAIVIYVNKDAGQKPFLPDSIEGIPVNVILTDQFIAF* |
| Ga0075431_1012941352 | 3300006847 | Populus Rhizosphere | AIVIYVNKDADVKGFIPESIDGIGVSVIYTEQFVAR* |
| Ga0075433_101143301 | 3300006852 | Populus Rhizosphere | LMFQPGVMGAGIGLSGRADGEAAIIIYVNKDAGARPILPDSIEGIPVNVILTDQFIAR* |
| Ga0079216_100252101 | 3300006918 | Agricultural Soil | KADGEAAIVVYVNKDAPARPVLPESLDGVAVTVILTDEFVAR* |
| Ga0075419_105814971 | 3300006969 | Populus Rhizosphere | KVAGEAAIVIYVNKDADVKGFIPESIDGIGVSVIYTDEFVAR* |
| Ga0075418_124324291 | 3300009100 | Populus Rhizosphere | MFQPGVMGVGVGLGRTDNEASIVIYVNKDAGTQPVLPTDIEGIPVTVILTDQFVAR* |
| Ga0105247_110387762 | 3300009101 | Switchgrass Rhizosphere | PGVIGAGVGLGRTDGEAAIVIYVNKNAGNKPILPDDIEGVPVTVILTDEFIAR* |
| Ga0114129_104560011 | 3300009147 | Populus Rhizosphere | IGASDKVAGEAAIVIYVNKDADVKGFIPESIDGIGVSVIYTEQFVAR* |
| Ga0114129_124710581 | 3300009147 | Populus Rhizosphere | NHRANLMFQPGVMGAGVGLSGRADGEAAIVIYVNKDSSARPILPDNLEGIPVTVILTDQFIAR* |
| Ga0105243_109165323 | 3300009148 | Miscanthus Rhizosphere | GAGRTDGEAAIVIYVNKNAEQRPILPDNIDGIPLTVVLTDQFIAF* |
| Ga0105243_109606792 | 3300009148 | Miscanthus Rhizosphere | HRANLMVTPGVMGAGVGASDRADGEAVIVLYVNKNSGNRPNLPDSIDGIPVTVVLTDEFIAR* |
| Ga0105241_101761814 | 3300009174 | Corn Rhizosphere | GIGLSGRADGEAAIIIYVNKDSGAQPILPDSIEGIPVNVILTDQFIAR* |
| Ga0105241_106309643 | 3300009174 | Corn Rhizosphere | NLMFTPGVMGAGVGVSDRADNEAAIVLYVNKNSGNRPNLPDSIDGVPVTVVLTDEFIAR* |
| Ga0105241_113700111 | 3300009174 | Corn Rhizosphere | AIVIYVNKDAGNKPFLPDSIEGVPVTVILTDQFVAF* |
| Ga0105237_125661391 | 3300009545 | Corn Rhizosphere | RANLMFQPGVIGAGVGLGRTDGEAAIVIYVNKNAGNKPILPDDIEGVPVTVILTDEFIAR |
| Ga0126313_101270951 | 3300009840 | Serpentine Soil | GRTDNEAAIVIYVNKNAGAKPILPDDIEGIPVTVILTDEFIAR* |
| Ga0126304_112203371 | 3300010037 | Serpentine Soil | IVIYVNKNAGGKPFLPDSIEGVPVTVILTDEFIAR* |
| Ga0126312_112997091 | 3300010041 | Serpentine Soil | QPAVMGVGVGASGRSDGEAAIVVYVNKDAGNRPFLPDSIEGIPVTVILTDEFIAR* |
| Ga0126314_104856641 | 3300010042 | Serpentine Soil | DGEAAIIVYVNKDSAARPFLPDSIEGIPVTVILTDEFIAR* |
| Ga0126311_105540422 | 3300010045 | Serpentine Soil | GVGVGASGRADGEAAIVVYVNKDAGNRPFLPDSIEGIPVTVILTDQFIAR* |
| Ga0126382_112103392 | 3300010047 | Tropical Forest Soil | LSGHKDGEAAIVIYVDKDSGTRPFLPDAIEGIPVNVILTDEIVAR* |
| Ga0126370_102887283 | 3300010358 | Tropical Forest Soil | AIVVYVNKDAGNTPFLPDSIEGIPVRVVLTDQFVAR* |
| Ga0126376_109366522 | 3300010359 | Tropical Forest Soil | MFQPGVMGAGVGLSGKADGEAAIVIYVNKDSDARPILPDNLEGIPVTVVLTDQFVAR* |
| Ga0134128_102149594 | 3300010373 | Terrestrial Soil | GVMGAGVGASDRADGEAVIVLYVNKNSGNRPNLPDSIDGIPVTVVLTDEFIAR* |
| Ga0105239_115541891 | 3300010375 | Corn Rhizosphere | MFQPGVIGAGVGLGRTDSEASIVIYVNKNAGNKPILPNDLEGVPVTVILTDEFIAR* |
| Ga0134127_129017532 | 3300010399 | Terrestrial Soil | GEASIVIYVNKDAGQKPILPDSIEGIPVTVVLTDEFIAR* |
| Ga0134122_100364937 | 3300010400 | Terrestrial Soil | MFQPGVMGAGVGLSGRADGEAAIVIYVNKNGQKPFLPDNIEGIPVTVVLTDQFIAF* |
| Ga0134121_105128412 | 3300010401 | Terrestrial Soil | EAAIVIYVNKDAAQSPVLPEEIEGVPVMVILTDQFIAR* |
| Ga0105246_122303202 | 3300011119 | Miscanthus Rhizosphere | ENHRANLMFQPGVMGAGVGLSGRADGEAAIVVYVNKNSAAKPFLPDNLEGVPVTVVLTDEFIAR* |
| Ga0157298_101906261 | 3300012913 | Soil | EVHRANLMFQPGVMGAGIGAGRTDNEAAIVIYVNKDAAQRPVLPDDIEGVPVTVILTDQFIAR* |
| Ga0126375_115407331 | 3300012948 | Tropical Forest Soil | QPAVMGVGVGASGRADGEAAIVVYVNKDAGNRPFLPDSIEGIPVTVILTDQFIAR* |
| Ga0157378_109849902 | 3300013297 | Miscanthus Rhizosphere | GEAAIVVYVNKDSARPFLPDNIEGIPVRTIFTDQFIAR* |
| Ga0157378_111701432 | 3300013297 | Miscanthus Rhizosphere | ANLMFQPGVMGAGIGTGRTDNEAAIVIYVNKDAAQKPILPDDIEGVPVTVILTDQFIAR* |
| Ga0163163_113689382 | 3300014325 | Switchgrass Rhizosphere | AAIVLYVNRNSANRPNLPDSIDGVPVTVVLTDEFIAR* |
| Ga0157380_115176382 | 3300014326 | Switchgrass Rhizosphere | RANLMFQPGVMGVGVGLSGRADGEGAIVVYVNKDAGNKPILPDSIEGIPVTVVLTDQFIAR* |
| Ga0157377_108705872 | 3300014745 | Miscanthus Rhizosphere | EQHRANLMFLPGVMGAGIGASGRADGEAAIVIYVNKDAQTKPPLPDSIDGIPVTVILTDQFIAY* |
| Ga0173478_107464492 | 3300015201 | Soil | ADGEAAIIIYVNKDSGAQPILPDSIEGIPVNVIVTDQFIAR* |
| Ga0132256_1024672751 | 3300015372 | Arabidopsis Rhizosphere | VGVGASGRADGEAAIVVYVNKDAGNRPFLPDSIEGIPVTTILTDEFIAR* |
| Ga0132255_1023176301 | 3300015374 | Arabidopsis Rhizosphere | PGVIGAGVGASDRADGQAAIVIYVDKDSANRPNLPDSLDGVPVNVVLTDKFIAR* |
| Ga0190268_110744682 | 3300018466 | Soil | TDNEAAIVIYVNKDSGAQPVLPTDIEGIPVTVVLTDQFVAR |
| Ga0190270_116096092 | 3300018469 | Soil | GAGVGASGRADGEAAIVIYVNKNSSAKPFLPDSIEGIPVTVILTDEFIAR |
| Ga0190274_129157331 | 3300018476 | Soil | HRANLMFQPGVMGVGVGLSNRAEGEGAIIIYVNKDAGNKPFLPESIEGIPVNVILTDQFIAF |
| Ga0207647_107855082 | 3300025904 | Corn Rhizosphere | ASIVIYVDKDSANRPNLPDSIDGIPVTVVLTDQFIAR |
| Ga0207643_100228061 | 3300025908 | Miscanthus Rhizosphere | LENHRANLMFQPGVMGVGVGASGRTDGEASIVIYVNKDAGQKPILPDSIEGIPVTVVLTDEFIAR |
| Ga0207660_113554831 | 3300025917 | Corn Rhizosphere | ADGEAAIVIYVNKDAQTKPPLPDSIDGIPVTVILTDQFIAY |
| Ga0207662_103432091 | 3300025918 | Switchgrass Rhizosphere | FTPGVIGAGIGQSDRADNEAAIVLYVNKNSGNRPNLPDSIDGVPVTVVLTDEFIAR |
| Ga0207662_109139832 | 3300025918 | Switchgrass Rhizosphere | ANLMFQPGVIGAGIGAGRTDNEAAIVIYVNKESGQRPILPNDIEGIPVIVVLTDPFIAF |
| Ga0207652_116727132 | 3300025921 | Corn Rhizosphere | RANLVFQPGVMGAGIGAGRTDNEAAIVIYVNKDAAQRPVLPEEIEGVPVMVILTDQFIAR |
| Ga0207646_101263535 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | GIGASNRADGEASIVLYVNKNSGNRPNLPDSIDGIPVTVVLTDEFIAF |
| Ga0207709_111516011 | 3300025935 | Miscanthus Rhizosphere | MGVGVGASGRTDGEAAIVVYVNKDAGQKPILPDSIEGIPVTVVLTDEFIAR |
| Ga0207689_110548711 | 3300025942 | Miscanthus Rhizosphere | SIVIYVNKDAGQKPILPDSIEGIPVTVVLTDEFIAR |
| Ga0207703_105007093 | 3300026035 | Switchgrass Rhizosphere | VMGAGIGAGRTDNEAAIVIYVNKDAAQKPILPDDIEGVPVTVILTDQFIAR |
| Ga0207708_1000009467 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MVPIARGIGAGRTDNEAAIVIYVNKDAAQRPILPDDIEGVPVTVILTDQFIAR |
| Ga0207641_108923381 | 3300026088 | Switchgrass Rhizosphere | GEASIVIYVNKDAGQKPILPDSIEGIPVTVVLTDEFIAR |
| Ga0207676_110341941 | 3300026095 | Switchgrass Rhizosphere | GAGVGASNRADGEAAIVIYVDKDSANRPNLPDSIDGIPVTVVLTDQFIAR |
| Ga0207698_112311791 | 3300026142 | Corn Rhizosphere | ELGIAGVIGAGVGLGRTDGEAAIVIYVNKNAGNKPILPDDIEGVPVTVILTDEFIAR |
| Ga0209387_10467521 | 3300027639 | Agricultural Soil | HRANLMFTPGVIGAGIGLGKADGEAAIVVYVNKDAPARPVLPESLDGVAVTVILTDEFVA |
| Ga0209073_102039751 | 3300027765 | Agricultural Soil | GAGVGLSGRADGEAAIVIYVNKNAGNKPILPDELEGVPVTVILTDEFIAR |
| Ga0268265_120271671 | 3300028380 | Switchgrass Rhizosphere | MGAGIGASGRGDGEAAIVIYVNKDAANKSVLPDSIDGVPVNVILT |
| Ga0310813_102716961 | 3300031716 | Soil | HRANLMFQPGVIGAGVGLGRTDGEAAIVIYVNKNAGNKPILPDDIEGVPVTVILTDEFVA |
| Ga0310813_105368721 | 3300031716 | Soil | FQPGVMGAGVGLSGRADGEAAIVIYVNKDAVQKPFLPDSIDGIPVNVILTDQFIAF |
| Ga0307406_110969021 | 3300031901 | Rhizosphere | FQPGVIGAGVGASGRADGEAAIVIYVNKDAGTRPVLPTDIEGIAVIVILTDPFIAF |
| Ga0310812_100747891 | 3300032421 | Soil | MGVGVGLSDRANGEGAIVVYVNKDADNKPFLPDSIEGIPVKVVLTDQFVAR |
| Ga0310810_109193031 | 3300033412 | Soil | LMFQSAVMGVGVGLSDRADGDGAIVVYVNKDADNKPFLPDSIEGIPVKVVLTDQFVAR |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |