Metagenome / Metatranscriptome Family F103841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103841
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	126 residues
Representative Sequence	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE
Number of Associated Samples	82
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	30.69 %
% of genes near scaffold ends (potentially truncated)	41.58 %
% of genes from short scaffolds (< 2000 bps)	75.25 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.396 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (12.871 % of family members)
Environment Ontology (ENVO)	Unclassified (27.723 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.584 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.46% β-sheet: 0.00% Coil/Unstructured: 21.54%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13714	PEP_mutase	2.97
PF00106	adh_short	2.97
PF13561	adh_short_C2	1.98
PF00903	Glyoxalase	1.98
PF00027	cNMP_binding	1.98
PF04519	Bactofilin	1.98
PF03330	DPBB_1	1.98
PF00005	ABC_tran	0.99
PF03466	LysR_substrate	0.99
PF13467	RHH_4	0.99
PF00664	ABC_membrane	0.99
PF13533	Biotin_lipoyl_2	0.99
PF00529	CusB_dom_1	0.99
PF11706	zf-CGNR	0.99
PF02353	CMAS	0.99
PF00842	Ala_racemase_C	0.99
PF00216	Bac_DNA_binding	0.99
PF02826	2-Hacid_dh_C	0.99
PF04226	Transgly_assoc	0.99
PF09084	NMT1	0.99
PF02615	Ldh_2	0.99
PF00535	Glycos_transf_2	0.99
PF11324	DUF3126	0.99
PF01168	Ala_racemase_N	0.99
PF00149	Metallophos	0.99
PF13458	Peripla_BP_6	0.99
PF07729	FCD	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.98
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.99
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.99
COG0787	Alanine racemase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.99
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.99
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.99
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.99
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.99
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.99
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.99
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
All Organisms	root	All Organisms	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
cellular organisms	root	All Organisms → cellular organisms	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.95 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.95 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4.95 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.98 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.99 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.99 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.95 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	3.96 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.98 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.98 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.99 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	0.99 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.95 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	3.96 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.98 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.98 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.99 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.99 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.95 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.98 %
Nocardia asteroides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asteroides	1.98 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.98 %
unclassified Gordonia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia	0.99 %
Mesorhizobium sp. Mes31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. Mes31	0.99 %
Bosea sp. BIWAKO-01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BIWAKO-01	0.99 %
Nocardia thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia thailandica	0.99 %
Nocardia farcinica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia farcinica	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.95 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.98 %
Nocardia asteroides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asteroides	1.98 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.98 %
Gordonia sp. v-85	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia → Gordonia sp. v-85	0.99 %
Mesorhizobium sp. Mes31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. Mes31	0.99 %
Bosea sp. BIWAKO-01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BIWAKO-01	0.99 %
Nocardia thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia thailandica	0.99 %
Nocardia farcinica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia farcinica	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig18740	Not Available	1283	Open in IMG/M
2170459013\|GO6OHWN02F2WOK	Not Available	510	Open in IMG/M
3300004114\|Ga0062593_100067739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. Mes31	2340	Open in IMG/M
3300004480\|Ga0062592_102129883	Not Available	557	Open in IMG/M
3300005332\|Ga0066388_100270430	All Organisms → cellular organisms → Bacteria → Proteobacteria	2341	Open in IMG/M
3300005332\|Ga0066388_100462626	Not Available	1909	Open in IMG/M
3300005334\|Ga0068869_100234271	Not Available	1460	Open in IMG/M
3300005347\|Ga0070668_101142030	Not Available	704	Open in IMG/M
3300005367\|Ga0070667_100446192	Not Available	1182	Open in IMG/M
3300005434\|Ga0070709_10388055	Not Available	1040	Open in IMG/M
3300005434\|Ga0070709_11143842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia farcinica	624	Open in IMG/M
3300005435\|Ga0070714_102451984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asteroides	506	Open in IMG/M
3300005436\|Ga0070713_101565158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia thailandica	640	Open in IMG/M
3300005439\|Ga0070711_101595091	Not Available	570	Open in IMG/M
3300005444\|Ga0070694_101713711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asteroides	535	Open in IMG/M
3300005457\|Ga0070662_101931727	Not Available	510	Open in IMG/M
3300005458\|Ga0070681_10404841	Not Available	1276	Open in IMG/M
3300005468\|Ga0070707_101112184	Not Available	756	Open in IMG/M
3300005530\|Ga0070679_101285333	Not Available	677	Open in IMG/M
3300005548\|Ga0070665_100552583	Not Available	1164	Open in IMG/M
3300005615\|Ga0070702_100072053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2044	Open in IMG/M
3300005616\|Ga0068852_101931140	Not Available	612	Open in IMG/M
3300005764\|Ga0066903_100005199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11232	Open in IMG/M
3300005764\|Ga0066903_100251826	All Organisms → cellular organisms → Bacteria	2726	Open in IMG/M
3300005843\|Ga0068860_101453339	Not Available	707	Open in IMG/M
3300006041\|Ga0075023_100487416	Not Available	552	Open in IMG/M
3300006172\|Ga0075018_10010586	All Organisms → cellular organisms → Bacteria	3405	Open in IMG/M
3300006954\|Ga0079219_10966824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → unclassified Gordonia → Gordonia sp. v-85	700	Open in IMG/M
3300009176\|Ga0105242_12932598	Not Available	527	Open in IMG/M
3300010043\|Ga0126380_10002231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	7641	Open in IMG/M
3300010043\|Ga0126380_10431110	Not Available	990	Open in IMG/M
3300010046\|Ga0126384_10168313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1705	Open in IMG/M
3300010358\|Ga0126370_10136318	Not Available	1767	Open in IMG/M
3300010358\|Ga0126370_10854599	Not Available	817	Open in IMG/M
3300010359\|Ga0126376_10001016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	14744	Open in IMG/M
3300010359\|Ga0126376_11620529	Not Available	680	Open in IMG/M
3300010360\|Ga0126372_10794949	Not Available	936	Open in IMG/M
3300010361\|Ga0126378_10029128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4914	Open in IMG/M
3300010371\|Ga0134125_10088955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3434	Open in IMG/M
3300010376\|Ga0126381_102364930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BIWAKO-01	763	Open in IMG/M
3300010396\|Ga0134126_10092992	All Organisms → cellular organisms → Bacteria	3715	Open in IMG/M
3300010400\|Ga0134122_10428293	Not Available	1177	Open in IMG/M
3300012951\|Ga0164300_10137097	Not Available	1128	Open in IMG/M
3300012971\|Ga0126369_11213795	Not Available	844	Open in IMG/M
3300012984\|Ga0164309_10067376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2144	Open in IMG/M
3300012987\|Ga0164307_10423822	Not Available	987	Open in IMG/M
3300012988\|Ga0164306_10904463	Not Available	719	Open in IMG/M
3300013102\|Ga0157371_10799186	Not Available	711	Open in IMG/M
3300013307\|Ga0157372_10582591	Not Available	1304	Open in IMG/M
3300015371\|Ga0132258_10428735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3293	Open in IMG/M
3300015371\|Ga0132258_10955801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2164	Open in IMG/M
3300015371\|Ga0132258_11158720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1954	Open in IMG/M
3300015372\|Ga0132256_102122388	Not Available	667	Open in IMG/M
3300015372\|Ga0132256_102781070	Not Available	588	Open in IMG/M
3300015373\|Ga0132257_101430941	Not Available	880	Open in IMG/M
3300015373\|Ga0132257_102178754	Not Available	717	Open in IMG/M
3300015373\|Ga0132257_102601995	Not Available	658	Open in IMG/M
3300015374\|Ga0132255_102041798	Not Available	873	Open in IMG/M
3300017944\|Ga0187786_10005705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2897	Open in IMG/M
3300017947\|Ga0187785_10042796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1676	Open in IMG/M
3300017947\|Ga0187785_10509288	Not Available	601	Open in IMG/M
3300017959\|Ga0187779_10379629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300017974\|Ga0187777_10012133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5445	Open in IMG/M
3300018058\|Ga0187766_10653470	Not Available	722	Open in IMG/M
3300018060\|Ga0187765_10023220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2979	Open in IMG/M
3300018060\|Ga0187765_10064229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1923	Open in IMG/M
3300019879\|Ga0193723_1109577	Not Available	774	Open in IMG/M
3300021560\|Ga0126371_10026508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5392	Open in IMG/M
3300021560\|Ga0126371_12086417	Not Available	683	Open in IMG/M
3300025900\|Ga0207710_10740831	Not Available	516	Open in IMG/M
3300025903\|Ga0207680_10126149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1681	Open in IMG/M
3300025906\|Ga0207699_10569902	Not Available	822	Open in IMG/M
3300025912\|Ga0207707_10717540	Not Available	838	Open in IMG/M
3300025914\|Ga0207671_11581220	Not Available	505	Open in IMG/M
3300025915\|Ga0207693_10044686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3481	Open in IMG/M
3300025919\|Ga0207657_10043362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3963	Open in IMG/M
3300025921\|Ga0207652_11255353	Not Available	643	Open in IMG/M
3300025922\|Ga0207646_10927199	Not Available	772	Open in IMG/M
3300025981\|Ga0207640_11686518	Not Available	572	Open in IMG/M
3300025986\|Ga0207658_10544515	Not Available	1038	Open in IMG/M
3300026078\|Ga0207702_10483427	Not Available	1205	Open in IMG/M
3300026494\|Ga0257159_1044807	Not Available	748	Open in IMG/M
3300027910\|Ga0209583_10622518	Not Available	552	Open in IMG/M
3300027915\|Ga0209069_10657456	Not Available	610	Open in IMG/M
3300028379\|Ga0268266_10167186	Not Available	1994	Open in IMG/M
3300030854\|Ga0075385_10858468	Not Available	568	Open in IMG/M
3300030916\|Ga0075386_11582434	Not Available	1099	Open in IMG/M
3300031198\|Ga0307500_10030298	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300031226\|Ga0307497_10017562	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300031226\|Ga0307497_10386663	Not Available	665	Open in IMG/M
3300031720\|Ga0307469_10807564	Not Available	861	Open in IMG/M
3300031720\|Ga0307469_11196937	Not Available	718	Open in IMG/M
3300031740\|Ga0307468_100068430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1958	Open in IMG/M
3300031740\|Ga0307468_100245746	Not Available	1254	Open in IMG/M
3300032174\|Ga0307470_10005639	All Organisms → cellular organisms → Bacteria → Proteobacteria	4904	Open in IMG/M
3300032770\|Ga0335085_10033424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7136	Open in IMG/M
3300032770\|Ga0335085_12373950	Not Available	529	Open in IMG/M
3300032782\|Ga0335082_10012496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9214	Open in IMG/M
3300032828\|Ga0335080_10085978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3489	Open in IMG/M
3300032828\|Ga0335080_11607992	Not Available	640	Open in IMG/M
3300032892\|Ga0335081_10592575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1370	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.28%
Host-Associated	Host-Associated	26.73%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.32%
Plants	Host-Associated → Plants	26.73%
Aquatic	Environmental → Aquatic	3.96%
Modeled	Engineered → Modeled	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.88%
Sediment	Environmental → Aquatic → Sediment	3.96%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.64%
Loam	Environmental → Terrestrial → Soil → Loam	18.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0740.00001570	2166559005	Simulated	MTTADLVGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE
N57_06148050	2170459013	Grass Soil	MTTADLAGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE
Ga0062593_1000677392	3300004114	Soil	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0062592_1021298831	3300004480	Soil	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0066388_1002704301	3300005332	Tropical Forest Soil	MTTGDLGGRLAFLERQVGLRKAGEIPNLESRIDMAERLVDQHGLDIGQYRHEAASKSAVLERRIRGLEQLVVFLAEVVIALIAVLFAGLVAAYLGGNYWLPSGGLAAFAFLVAFLGANILFRKVASSCLSS*
Ga0066388_1004626261	3300005332	Tropical Forest Soil	MSTSDFGGRLASLGRQVGTGIAGEMPNLERRIDMAERLVDQHSVEIAQYRHEAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD*
Ga0068869_1002342713	3300005334	Miscanthus Rhizosphere	MTTTDLGGRLAFLERQVSTRKTGEIPNLESRTGGAEELLDQLAYNSGLYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGSDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0070668_1011420302	3300005347	Switchgrass Rhizosphere	MTTADLGWRLAFLERQVSTRKAGEIPNLESRIGLTEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGSDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0070667_1004461921	3300005367	Switchgrass Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVV
Ga0070709_103880551	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0070709_111438421	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTDLGGRLAFLERQVSTRKTGEIPNLESRIGRAEELLDQLAYNSGLYRHEAASKSAILESRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0070714_1024519841	3300005435	Agricultural Soil	KAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0070713_1015651581	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DLGGRLAFLERQVSTRKTGEIPNLESRIGRAEELLDQLAYNSGLYRHEAASKSAILESRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0070711_1015950911	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE*
Ga0070694_1017137111	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0070662_1019317271	3300005457	Corn Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLV
Ga0070681_104048413	3300005458	Corn Rhizosphere	GGRLAFLERQVSTRKAGEIPNLESRIGLTEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGRDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0070707_1011121842	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGA
Ga0070679_1012853332	3300005530	Corn Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKV
Ga0070665_1005525831	3300005548	Switchgrass Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLKRRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0070702_1000720533	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0068852_1019311402	3300005616	Corn Rhizosphere	KAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0066903_10000519914	3300005764	Tropical Forest Soil	MTTADLGARLAFLERQIGARKPGEIVNLESRIDHVERLIDQYCLHLGQYQQETASKSAVLQRRIRGLERLVIFLADVLIALIAVLFAGLVAGYLGGDYWLSSSSLAVLALLVAYLGANILFRKVTRSLSE*
Ga0066903_1002518262	3300005764	Tropical Forest Soil	MSTSDFGGRLASLGRQVGTGIAGEIPNLERRIDMAERLVDQHSVEIAQYRHDAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD*
Ga0068860_1014533391	3300005843	Switchgrass Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLTEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGSDYWLSSSGLAAFAFLVAFLGANFLFRKVV
Ga0075023_1004874161	3300006041	Watersheds	PALVVTWGHHMTTADVDGRVAFLERQVGSRKAGEILNLENRIDLAERLVDQHGLDIMQYRQEATNNSAVLEARIRGLEQLVVFLAEVLVALIAVLAAGLVAGYLGGDYWVRSSGLAAIAFLVAFLGANFLFREVVNSCLK*
Ga0075018_100105864	3300006172	Watersheds	MTTADLVGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE*
Ga0079219_109668241	3300006954	Agricultural Soil	MTTSDFGGRLAFLGREVGTGRAGEIPNLENRIDMAERLVDQQGLDIGQYRHEAASKSAVLERRIGGLERLVVFLAEVLIALIAAVVAALVAGYLGGDYWLPSSGLAAFAFLVAFLAANFLFRKVVSSCLE*
Ga0105242_129325981	3300009176	Miscanthus Rhizosphere	AFLERQVSTRKAGEIPNLESRIGLTEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGSDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE
Ga0126380_100022312	3300010043	Tropical Forest Soil	MSTSDFGGRLASLGRQVGTGIAGEIPNLERRIDMAERLVDQHSVEIAQYRHEAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD*
Ga0126380_104311101	3300010043	Tropical Forest Soil	LGARLAFLERQIGARKPGEIVNLESRIDHVERLIDQYCLHLGQYQQDTASKSAVLQRRIRGMERLVIFLAAVLIARIPVLFAGLVAGYLGGDYWLSSSSLAVLALLVAYLGANILFRKVTRSLSE*
Ga0126384_101683133	3300010046	Tropical Forest Soil	MSISDFGGRLASLGRQVGTGIAGEIPNLERRIDMAERLVDQHSVEIAQYRHEAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD*
Ga0126370_101363181	3300010358	Tropical Forest Soil	MTTADLGARLAFLERQIGARKPGEIVNLESRIDHVERLIDQYCLHLGQYQQETASKSAVLQRRIRGLERLVIFLADVLIALIAVLFAGLVAGYLGGDYWLSSSSLAVLALLVAYLGANTLFRKVTRSLSE*
Ga0126370_108545991	3300010358	Tropical Forest Soil	DFGGRRASLKRQVGTGIAGEIPNLERRIDMAERLVDQHSVEIAQYRHDAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD*
Ga0126376_100010169	3300010359	Tropical Forest Soil	MSTSDFGGRLASLGRQVGTGIAGEMPNLERRIDMAERLVDQHSVEIAQYRHDAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD*
Ga0126376_116205291	3300010359	Tropical Forest Soil	MTAADLGGRLAFLERKVSTHRAAEIPNLESRIGLAEELLDQHDHKSALLQRRIKGLERLLVFLAEVLIALIAVVVAGLVAGYLGGDYLVSSGGLAAFAFLVAFLGANFLFRKVLSTCLE*
Ga0126372_107949491	3300010360	Tropical Forest Soil	MTTADLGARLAFLERQIGARKPGEIVNLESRIDHVERLIDQYCLHLGQYQQETASKSAVLQRRIRGMERLVIFLADVLIALIAVLFAGLVAGYLGGDYWLSSSSLAVLALLVAYLGANILFRKVTRSLSE*
Ga0126378_100291286	3300010361	Tropical Forest Soil	MSTSDFGGRLASLGHQVGTGIAGEIPNLERRIDMAERLVDQHSVEIAQYRHDAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD*
Ga0134125_100889552	3300010371	Terrestrial Soil	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLTEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGSDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0126381_1023649301	3300010376	Tropical Forest Soil	IPNLESRIDMAERLVDQHGLDIGQYRHEAATKSAVLERRIRGLEQLVVFLAEVVIALIAVLFAGLVAAYLGGNYWLPSGGLAAFAFLVAFLGANILFRKVASSCLSS*
Ga0134126_100929921	3300010396	Terrestrial Soil	GGRLAFLERQVSTRKAGEIPNLESRIGLTEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGSDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0134122_104282932	3300010400	Terrestrial Soil	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLTEELLDQHGYNIEQYRHEAACKSVMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGSDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0164300_101370971	3300012951	Soil	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYNIEQYRHEAASKSATLERRIKGLERLVVFVAEVLIALMAVVFAGLVAGYLGGDYWLSSSGLAAFALLVAFLGANFLFRKVVISCLE*
Ga0126369_112137951	3300012971	Tropical Forest Soil	MTTSDFGGRLAFLGRQVGTGSAGQVPNLESRIDMAERLVEEHSLEIGQYRHEAASKSAMLERRIGGIERLVVFLAEVLIALIAAVVAALVAGYLGGDYWLPSGGLAAFAFLVVFLGANLLFRKVVSSCLD*
Ga0164309_100673761	3300012984	Soil	AGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0164307_104238221	3300012987	Soil	IGWKLPLVSSALFATWGHYMTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0164306_109044631	3300012988	Soil	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0157371_107991861	3300013102	Corn Rhizosphere	MTTTDLGGRRAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0157372_105825912	3300013307	Corn Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLA*
Ga0132258_104287353	3300015371	Arabidopsis Rhizosphere	MTTVDLGGRLAFLERQVSTRKVGEIPNLETRIGLAEKLLDQHDYNIGQHRHEAASRSAMLQRRIKGLERLVVFLAEVLIVLIAVVFAGLVAGYLGGNYWLPSSGLAAFSFLVVFLGANFLFRKVASSCLQ*
Ga0132258_109558012	3300015371	Arabidopsis Rhizosphere	MTTSDFGGRLAFLGRQVGTGSAGQVPNLESRIDMAERLVEEHSLEIGQYRHEAASKSAMLERRIGGIERLVVFLAEVLIALIAAVVAALVAGYLGSDYWLPSSGLAAFAFLVVFLGANLLFRKVVSSCLD*
Ga0132258_111587204	3300015371	Arabidopsis Rhizosphere	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLAEVQLDQHGYNIEQYRYEAASKSAILERRIKGLERLAVFLAEVLIALIAVLFAGLVAGYLGGNYWLSSGDLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0132256_1021223881	3300015372	Arabidopsis Rhizosphere	MTTSDFGGRLAFLGRQVGTGSAGQVPNLESRIDMAERLVEEHSLEIGHYRHEAASKSAMLERRIGGIERLVVFLAEVLIALIAAVVAALVAGYLGGDYWLPSSGLAAFTFLVVFLGANLLFRKVVSSC
Ga0132256_1027810701	3300015372	Arabidopsis Rhizosphere	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLVEELLDQHGYNSAHYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE*
Ga0132257_1014309412	3300015373	Arabidopsis Rhizosphere	MTTSDFGGRLAFLGRQVGTGSAGQVPNLESRIDMVERLVEEHSLEIGHYRHEAASKSAMLERRIGGIERLVVFLAEVLIALIAAVVAALVAGYLGSDYWLPSSGLAAFAFLVVFLGANLLFRKVVSSCLD*
Ga0132257_1021787541	3300015373	Arabidopsis Rhizosphere	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLAEVQLDQHGYNIEQYRYEAASKSAILERRIKGLERLAVFLAEVLIALIAVLFAGLVAGYLGGNYFSSGGLAAFAFLVAFL
Ga0132257_1026019951	3300015373	Arabidopsis Rhizosphere	TTADLGGRLAFLERQVSTRKAGEIPNLESRIGLVEELLDQHGYNSAHYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGSLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0132255_1020417981	3300015374	Arabidopsis Rhizosphere	LGGRLAFLERQVSTRKAGEIPNLESRIGLVEELLDQHGYNSAHYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE*
Ga0187786_100057053	3300017944	Tropical Peatland	MTTNDLGGRLVFPERQVGTRKAGGIPNLESRIDLTEKLVDQQGLMVGQYRHEAESRSAVLERRVEGLERLVVFLAEALIALIAVVFGGLVAGYLGSGYLLLSSGLAAFAFLVVFQGANLLFRKVASSCFR
Ga0187785_100427961	3300017947	Tropical Peatland	LVFPERQIGIRKTSEILNLESRIDLAEKLVDQHGQTVGQYRHEAANRSAALERRIKGLERLIVFLAEVLIALIAVVFAGLIAGYLGGGYLLPSSGFAAFAFLLAFLGANLLFRKVASSCF
Ga0187785_105092881	3300017947	Tropical Peatland	MSTSDFGGRLASLGRQVGTGIAGEIPNLERRIDMAERLVDQHSVEIAQYRHDAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD
Ga0187779_103796291	3300017959	Tropical Peatland	MTTGDLGGRRLVFPERQIGIRKTSEILNLESRIDLAEKLVDQHGQTVGQYRHEAANRSAALERRIKGLERLIVFLAEVLIALIAVVFAGLIAGYLGGGYLLPSSGLAAFAFLVAFLGANLLFRKVASSCFQ
Ga0187777_100121333	3300017974	Tropical Peatland	MTTGDLGGRRLVFPERQIGIRKTSEILNLESRIDLAEKLVDQHGQTVGQYRHEAANRSAALERRIKGLERLIVFLAEVLIALIAVVFAGLIAGYLGGGYLLPSGGLAAFAFLVAFLGANLLFRKVASSCFQ
Ga0187766_106534701	3300018058	Tropical Peatland	DLGRRLVFPERHAGTRKSSEILNLENRIDLTEKLVDQNGQTVGQYRHEAANRSAALERRIKGLERLIVFLAEVLIALIAVVFAGLIAGYLGGGYLLPSSGLAAFAFLVAFLGANLLFRKVASSCFQ
Ga0187765_100232201	3300018060	Tropical Peatland	MTTGDLGGRRLVFPERQIGIRKTSEILNLESRIDLAEKLVDQHGQTVGQYRHEAANRSAALERRIKGLERLIVFLAEVLIALIAVVFAGLIAGYLGCGYLLPSSGLAAFAFLVAFLGANLLFRKVASSCFQ
Ga0187765_100642291	3300018060	Tropical Peatland	MTTSDFGGRLAFLGRQVGTGSAGQVPNLESRIDMAERLVEEHSLEIGQYRHEAASKSAMLERRIGGIERLVVFLAEVLIALIAAVVAALVAGYLGGDYWLPSGGLAAFAFLVVFLGANLLFRKVVSSCLD
Ga0193723_11095771	3300019879	Soil	GRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE
Ga0126371_100265087	3300021560	Tropical Forest Soil	MSTSDFGGRLASLGRQVGTGIAGEMPNLERRIDMAERLVDQHSVEIAQYRHDAYSRSAVLERRLGGMERLVVFLAEVLIALIAAVAAALVAGYLGGDYWFPSSGLAAFAFLVVFLGANFLFRKVAVSCLD
Ga0126371_120864171	3300021560	Tropical Forest Soil	MTTGDLGGRLAFLERQVGLRKAGEIPNLESRIDMAERLVDQHGLDIGQYRHEAASKSAVLERRIRGLEQLVVFLAEVVIALIAVLFAGLVAAYLGGNYWLPSGGLAAFAFLVAFLGANILFRKVASSCLSS
Ga0207710_107408311	3300025900	Switchgrass Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVI
Ga0207680_101261493	3300025903	Switchgrass Rhizosphere	GEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE
Ga0207699_105699021	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	YMTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE
Ga0207707_107175401	3300025912	Corn Rhizosphere	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE
Ga0207671_115812201	3300025914	Corn Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANF
Ga0207693_100446864	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTTADLVGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE
Ga0207657_100433621	3300025919	Corn Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAF
Ga0207652_112553531	3300025921	Corn Rhizosphere	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLTEELLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVVFAGLVAGYLGSDYWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE
Ga0207646_109271991	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFR
Ga0207640_116865181	3300025981	Corn Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVIS
Ga0207658_105445152	3300025986	Switchgrass Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGL
Ga0207702_104834272	3300026078	Corn Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWPSSSGLAAFAFLVAFLGANFLFRKVVISCLE
Ga0257159_10448072	3300026494	Soil	MTTADLGGRLAFLERQVSTRKASEIPNLESRIGLAEELLDQHGYNIEQYCHEAASKSAMLERRIKGLERLVVFLAEVLIALIAVLVAGLVAGYLGGNYWLSSSGLAAFAFLVAFLGANFLFRKVVSFCLE
Ga0209583_106225181	3300027910	Watersheds	PALVVTWGHHMTTADVDGRVAFLERQVGSRKAGEILNLENRIDLAERLVDQHGLDIMQYRQEATNNSAVLEARIRGLEQLVVFLAEVLVALIAVLAAGLVAGYLGGDYWVRSSGLAAIAFLVAFLGANFLFREVVNSCLK
Ga0209069_106574561	3300027915	Watersheds	TTADLVGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE
Ga0268266_101671863	3300028379	Switchgrass Rhizosphere	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLKRRTKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE
Ga0075385_108584681	3300030854	Soil	MTTADLVGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLAS
Ga0075386_115824342	3300030916	Soil	MTTADLVGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLVRKVVSSCLE
Ga0307500_100302981	3300031198	Soil	QVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE
Ga0307497_100175623	3300031226	Soil	MTTADLVGRLAFLERQVSTRKAGEIPNLESRIGLAEVLLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVIAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE
Ga0307497_103866631	3300031226	Soil	MTTTDLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDQHGYTIGQYRHEAASKLTMLERRMKGLERLVVFLAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAF
Ga0307469_108075641	3300031720	Hardwood Forest Soil	STRKAGEIPNLESRIGRAEELLDQLAYNSGLYRHEAASKSAILESRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE
Ga0307469_111969371	3300031720	Hardwood Forest Soil	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGLAEELLDEHGYNIGQYRHEAAGKSAMLERRIKGLERLVVFVAEVLIALIAVVVAGLVAGCLGGDYWLSSSGLAAFAFLVAFLGGNFLFRKVVSSCLE
Ga0307468_1000684304	3300031740	Hardwood Forest Soil	MTTADLGGRLAFLERQVSTRKTGEIPNLESRIGRAEELLDQLAYNSGLYRHEAASKSAILESRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVS
Ga0307468_1002457462	3300031740	Hardwood Forest Soil	MTTADLGGRLAFLERQVSTRKAGAIPNLESRVGLAEVQLDQHGYNIEQYRHEAASKSAMLERRIKGLERLVVFVAEVLIALIAVMVGGLVAGYLGGNHWLSSSGLAAFAFLVAFLGANFLFRKVVSSCLE
Ga0307470_100056395	3300032174	Hardwood Forest Soil	MTTADLGGRLAFLERQVSTRKAGEIPNLESRIGRAEELLDQLAYNSGLYRHEAASKSAILESRIKGLERLVVFVAEVLIALIAVVVAGLVAGYLGGDYWLSSSGLAAFAFLVAFLGANFLFRKVVISCLE
Ga0335085_100334241	3300032770	Soil	MTTNDLGGRLVFPERQVGTRKAGGILNLESRIDLAEKLVDQHGLMVGQYRHEAASRSAVLERRVEGLERLVVFLAEALIALIAVVFGGLVAGYLGGGYLLLSSGLAAFAFLVVFQGANLLFRKVASSCFR
Ga0335085_123739502	3300032770	Soil	MTTADRSGRLVFPQRQVGVDKAGAPVNSESRIDLAEKLVNQHGLIVEQYRHEAASRSAVLERRVEGLERLVVFLAEALIALIAVVFGGLVAGYLGGGYLLLSSGLAAFAFLVVFQGANLLFRKVARSCFR
Ga0335082_100124961	3300032782	Soil	FPERQVGTRKAGGILNLESRIDLAEKLVDQHGLMVGQYRHEAASRSAVLERRVEGLERLVVFLAEALIALIAVVFGGLVAGYLGGGYLLLSSGLAAFAFLVVFQGANLLFRKVASSCFR
Ga0335080_100859783	3300032828	Soil	MTTADRSGRLVFPQVGAPVNLESRIDLAEKLVDQHGLMVGQYRHEAASRSAVLERRIKGLERLIVFLAEVLIALIAVVFAGLIAGFLGGGYLLPSTSLAAFAFLVAFLGANLLFRKVASSCFR
Ga0335080_116079922	3300032828	Soil	MTTADPSGRLAFPERHLSARKAGEILNLESRIDLAEKLVNQHGLIVEQYRHEAANRSAVLERRIKGLERLIVFLAEVLIALIAVVFAGLIAGFLGGGYLLPSSSFAAFAFLVAFLGANLLFRKVASSCFR
Ga0335081_105925752	3300032892	Soil	MTTNDLGGRPVFPERQVGTRKAGGIPNLESRIDLAEKLVDQHGLMVGQYRHEAASRSAVLERRVEGLERLVVFLAEALIALIAVVFGGLVAGYLGGGYLLLSSGLAAFAFLVVFQGANLLFRKVASSCFR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences