Metagenome / Metatranscriptome Family F103828

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103828
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	83 residues
Representative Sequence	FLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Number of Associated Samples	91
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.03 %
% of genes from short scaffolds (< 2000 bps)	88.12 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.010 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.861 % of family members)
Environment Ontology (ENVO)	Unclassified (20.792 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (31.683 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.09% β-sheet: 33.03% Coil/Unstructured: 56.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.98.1.1: beta-lactamase-inhibitor protein, BLIP	d1jtgb_	1jtg	0.71272
d.98.1.0: automated matches	d3gmxa_	3gmx	0.70177
d.17.1.6: PepSY-like	d2gu3a1	2gu3	0.65013
e.7.1.0: automated matches	d5iz3a_	5iz3	0.64816
d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain	d1yfsa2	1yfs	0.62661

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00664	ABC_membrane	17.82
PF12833	HTH_18	0.99
PF02684	LpxB	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0763	Lipid A disaccharide synthetase	Cell wall/membrane/envelope biogenesis [M]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.42 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.99 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.42 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.99 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.42 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.99 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002122\|C687J26623_10031627	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300005439\|Ga0070711_101893477	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005538\|Ga0070731_10076648	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300005541\|Ga0070733_10440639	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005545\|Ga0070695_101443383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005610\|Ga0070763_10787683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300006050\|Ga0075028_100005174	All Organisms → cellular organisms → Bacteria	5060	Open in IMG/M
3300006052\|Ga0075029_100037623	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300006059\|Ga0075017_100108859	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300006059\|Ga0075017_100272961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300006086\|Ga0075019_10150106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300006162\|Ga0075030_100614077	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300006172\|Ga0075018_10212961	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300006174\|Ga0075014_100013071	All Organisms → cellular organisms → Bacteria	2985	Open in IMG/M
3300006354\|Ga0075021_10128074	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300006755\|Ga0079222_10737776	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300009029\|Ga0066793_10454104	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300009089\|Ga0099828_12038101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009090\|Ga0099827_10425374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300009553\|Ga0105249_11764760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300009643\|Ga0116110_1009511	All Organisms → cellular organisms → Bacteria	4090	Open in IMG/M
3300009698\|Ga0116216_10240688	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300009777\|Ga0105164_10416169	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300010048\|Ga0126373_11572597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300010379\|Ga0136449_100954061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1388	Open in IMG/M
3300011120\|Ga0150983_14182454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300011120\|Ga0150983_14764526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300011269\|Ga0137392_11141880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012205\|Ga0137362_10670602	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300012205\|Ga0137362_10942651	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300012362\|Ga0137361_11790395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300012582\|Ga0137358_10818219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300012917\|Ga0137395_10150529	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300012917\|Ga0137395_10394732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300012917\|Ga0137395_10410704	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300012917\|Ga0137395_10648145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300012925\|Ga0137419_11081491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300012929\|Ga0137404_10806399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300012944\|Ga0137410_11345940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300014159\|Ga0181530_10507388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300014200\|Ga0181526_10564172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300014201\|Ga0181537_10332499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300014501\|Ga0182024_12653278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300014638\|Ga0181536_10361227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300014968\|Ga0157379_10410713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1245	Open in IMG/M
3300015371\|Ga0132258_12801792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300017822\|Ga0187802_10427937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300017933\|Ga0187801_10402069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300017943\|Ga0187819_10006121	All Organisms → cellular organisms → Bacteria	6666	Open in IMG/M
3300017943\|Ga0187819_10525322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300017970\|Ga0187783_10537594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300017993\|Ga0187823_10169362	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300017996\|Ga0187891_1266575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300018006\|Ga0187804_10326245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300018007\|Ga0187805_10031252	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300018012\|Ga0187810_10458570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300018024\|Ga0187881_10413430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300018042\|Ga0187871_10862604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300021088\|Ga0210404_10228152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300021171\|Ga0210405_10372255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300021171\|Ga0210405_10642390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300021432\|Ga0210384_10501694	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300021433\|Ga0210391_10021298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5221	Open in IMG/M
3300022532\|Ga0242655_10140658	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300024271\|Ga0224564_1075857	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300025922\|Ga0207646_11271423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300026320\|Ga0209131_1219897	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300026371\|Ga0257179_1033380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300026514\|Ga0257168_1153291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300027570\|Ga0208043_1052978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300027651\|Ga0209217_1007740	All Organisms → cellular organisms → Bacteria	3562	Open in IMG/M
3300027894\|Ga0209068_10066985	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300027911\|Ga0209698_10496448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300027911\|Ga0209698_11369754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300028047\|Ga0209526_10009579	All Organisms → cellular organisms → Bacteria → Acidobacteria	6673	Open in IMG/M
3300028773\|Ga0302234_10259059	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300028906\|Ga0308309_11546498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300030618\|Ga0311354_10340832	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300030659\|Ga0316363_10030457	All Organisms → cellular organisms → Bacteria	2768	Open in IMG/M
3300030763\|Ga0265763_1039360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300030991\|Ga0073994_10052467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300030991\|Ga0073994_12413644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300031090\|Ga0265760_10254279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300031231\|Ga0170824_118206653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300031233\|Ga0302307_10461764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300031249\|Ga0265339_10317060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	740	Open in IMG/M
3300031708\|Ga0310686_114721222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300031753\|Ga0307477_10214998	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300031754\|Ga0307475_10617084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300031820\|Ga0307473_10438222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300031823\|Ga0307478_11387941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300031949\|Ga0214473_10316943	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300031962\|Ga0307479_12084251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300032180\|Ga0307471_101762450	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300032205\|Ga0307472_100761201	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300032515\|Ga0348332_14023312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300032828\|Ga0335080_11627284	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300033158\|Ga0335077_12037316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300033402\|Ga0326728_11211177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300033755\|Ga0371489_0094004	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.04%
Host-Associated	Host-Associated	3.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.33%
Aquatic	Environmental → Aquatic	28.71%
Plants	Host-Associated → Plants	3.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.40%
Freshwater	Environmental → Aquatic → Freshwater	16.83%
Sediment	Environmental → Aquatic → Sediment	11.88%
Peat	Environmental → Terrestrial → Peat	5.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.97%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.88%
Loam	Environmental → Terrestrial → Soil → Loam	9.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.98%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	11.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.99%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26623_100316273	3300002122	Soil	AKLWRTGRGLKLGDPQHRVIEYYGEPNSSGPSTKGYRELELMFYAFDWAGSDVPQVMEVLCERATGRVVEITLAFPSL*
Ga0070711_1018934772	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GKCGDKRVDFLDGKNWVTGTGLRVGDSQDRVVDFYGEPNSSGPAAKNGQELQLMFYQFDWAGSDVPQAMEVLCARDSGRVVEITLAFPSL*
Ga0070731_100766483	3300005538	Surface Soil	VDFLDPKNWVTGLGLRIGDSQDQIVALYGEPNSSGPATKNGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAYPSL*
Ga0070733_104406392	3300005541	Surface Soil	DFLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQDLELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0070695_1014433832	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDALDTKFWVTGLGLRLSDSQDRVISLYGEPNSSGPSVKGEQELEFLYYAFDWAGSDVPQVLEVYCARDTGRVVEITLAYPSL*
Ga0070763_107876831	3300005610	Soil	MGDSQDRVVGLYGEPNSSGPASKNRQELELMFYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0075028_1000051745	3300006050	Watersheds	PDFLDPRNWLTGLGLRMGDSQDRVAGLYGEPNSSGPASKNGQELSLMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0075029_1000376231	3300006052	Watersheds	PKFWLTGLGLRMGDSQDRVVALYGEPNSSGPASKNGQDLELMYYQFDWAGSEVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0075017_1001088591	3300006059	Watersheds	IQSITLTTVGKQEGKCSDRRPDFLDPRFWLTGLGLRMGDSQDRVVALYGEPHSGGPATKNGQELDLMYYQFDWAGSDVPQVMEILCARDTGRVVEITLAFPSL*
Ga0075017_1002729613	3300006059	Watersheds	DMQEGKCSDRRPDFLDPKFWLTGLGLRMGDSQDRVVALYGEPNSSGPASKNGQDLELMYYQFDWAGSEVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0075019_101501063	3300006086	Watersheds	CSDRRPDFLDPKFWLTGLGLRMGDSQDRVVALYGEPNSSGPASKNGQDLELMYYQFDWAGSEVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0075030_1006140771	3300006162	Watersheds	GLRIGDSQDRVTDFYGEPNSSGPASKNGKDLALMYYQFEWAGSNVPQVMEVLCARDTGRVVEITLAFPDL*
Ga0075018_102129611	3300006172	Watersheds	RIGDSQDRVVDFYGEPNSSGPAAKNGQELELMFYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSV*
Ga0075014_1000130711	3300006174	Watersheds	RMGDSQDRVVALYGEPHSGGPATKNGQELDLMYYQFDWAGSDVPQVMEILCARDTGRVVEITLAFPSL*
Ga0075021_101280743	3300006354	Watersheds	VGLRIGDSQDRVVDYYGEPNSSGPAAKNGQELQLMFYQFDWAGSDVPQAMEVLCARDSGRVVEITLAFPSL*
Ga0079222_107377761	3300006755	Agricultural Soil	WVTGTGLRMGDSQDRVVDFYGEPNSSGPAAKNGQELQLMFYQFDWAGSDVPQAMEVLCARDSGRVVEITLAFPSL*
Ga0066793_104541041	3300009029	Prmafrost Soil	RRVYCRNARTWVTGLGLRMGDSQDQIVGLYGEPNSSGPATKNGQELALLYYQFDWAGSSVPQAMEVLCARDSGRVVEITLAFPSL*
Ga0099828_120381012	3300009089	Vadose Zone Soil	GRGLKLSDPRDRVLELYCEPNSSGPSEKGSHELELIFYAFDWAGSDVPQVMEVFCDRATGRVVEITLAFPSL*
Ga0099827_104253741	3300009090	Vadose Zone Soil	NWATGQGLRVGDSQDQVFAVYGEPKSTSPSSKYGEELELLVYQFDWAGSDVPQVLEVLCARDTGRVVEMTLAFPSL*
Ga0105249_117647602	3300009553	Switchgrass Rhizosphere	DTKFWVTGLGLRLSDSQDRVISLYGEPNSSGPSVKGEQELEFLYYAFDWAGSDVPQVLEVYCARDTGRVVEITLAYPSL*
Ga0116110_10095111	3300009643	Peatland	TGSCAGRHGDLLHEDQWQTGRGLRLGDPQDRVTLLYGDPNSSGPSVKGKHELELLFYAFDWAGSSVPQVMEVFCARDSGRVMEITLAYPSL*
Ga0116216_102406883	3300009698	Peatlands Soil	GLRLGDSQDRVFELYGDANSAGPSVKGDRELELLYYAFDWAGSDVPQVMEILCARESGRVMEITLAYPSL*
Ga0105164_104161691	3300009777	Wastewater	LKLGDPRDRVVELYGESNSSGPSAKGTRELELLFYAFDWAGSDVPQVMEVSCDRATGRVVEITLAFPSL*
Ga0126373_115725972	3300010048	Tropical Forest Soil	GKCGDRRPDFLDARNWVTGQGLRMGDSQDRVIDLYGEPNSSGPASKNGQELALMYYQFDWAGSEVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0136449_1009540611	3300010379	Peatlands Soil	KDWQTGHGLRLGDSQDRVGELYGDANSTGPSVKGDRELELLYYAFDWAGSDVPQVMEILCARESGRVMEITLAYPSL*
Ga0150983_141824541	3300011120	Forest Soil	PRYWLTGLGLRMGDSQDRVVGIYGEPNSSGPASKNGQELEMMYYQFNWAGSDVPQVMEVLCARESGRVVEITLAFPSL*
Ga0150983_147645261	3300011120	Forest Soil	KFWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNRQELELLHYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0137392_111418801	3300011269	Vadose Zone Soil	TQEGKCSDRRPDFLDPRNWITGLGLRMGDSQDRVAALYGEPNSGGPASKNGQELELMFYQFDWAGSDVPQAMEILCARDSGRVVEITLAFPSL*
Ga0137362_106706022	3300012205	Vadose Zone Soil	WVTGVGLRIGDSQDRVVDYYGEPNSSGPAAKNGQELQLMFYQFDWAGSDVPQAMEVLCARDSGRVVEITLAFPSL*
Ga0137362_109426511	3300012205	Vadose Zone Soil	GVGLRIGDPQDRIIDFYGEPNSSGPAAKNGQELELMSYQFDWAGSDVPQAMEVLCARDTGRVVEITLAFPSS*
Ga0137361_117903951	3300012362	Vadose Zone Soil	LDPKFWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNRQELELLYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0137358_108182191	3300012582	Vadose Zone Soil	KCGDKRVEFLDPKNWVTGVGLRIGDPQDRIIDFYGEPNSSGPAAKNGQELELMSYQFDWAGSDVPQAMEVLCARDTGRVVEITLAFPSS*
Ga0137395_101505293	3300012917	Vadose Zone Soil	DPRNWVTGLGLRIGDSQDQIIGLYGEPNSSGPATKNGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0137395_103947321	3300012917	Vadose Zone Soil	KRVEFLDPKNWVTGVGLRIGDPQDRIIDFYGEPNSSGPAAKNGQELELMSYQFDWAGSDVPQAMEVLCARDTGRVVEITLAFPSS*
Ga0137395_104107042	3300012917	Vadose Zone Soil	PRNWLTGLGLRMGDSQDRVIGLYGEPNSGGPASKNGQELELMVYQFDWAGSDVPQAMEVLCARDSGRVVEITLAFPSL*
Ga0137395_106481451	3300012917	Vadose Zone Soil	KRVEFLDPKNWVTGVGLRIGDPQDRIIDFYGEPNSSGPAAINGPDLELMSYLFDWAGSDVPQAMEVLCARDTGRVVEITLAFPSS*
Ga0137419_110814912	3300012925	Vadose Zone Soil	FQEGKCGDKRVEFLDPKNWVTGVGLRIGDPQDRIIDFYGEPNSSGPAAKNGQELELMSYQFDWAGSDVPQAMEVLCARDTGRVVEITLAFPSS*
Ga0137404_108063992	3300012929	Vadose Zone Soil	ADFLDGKNWVTGVGLRVGDSQDRVVDYYGEPNSSGPAAKNGQELQLMFYQFDWAGSDVPQAMEVLCARDSGRVVEITLAFPSL*
Ga0137410_113459401	3300012944	Vadose Zone Soil	KDGKCSEKRADFLDPRNWVTGLGLRINDSQDQVVGMYGEPNSSGPATKNGQELALMYYRFDWAGSDVPQVMEILCARDTGRVVEITLAYPSL*
Ga0181530_105073882	3300014159	Bog	FLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0181526_105641722	3300014200	Bog	TTLEPQEGKCIGRQADFLDPKNWVTGLGVRIGDSQDRIVGVYGEPNSSGPASKYGKELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0181537_103324993	3300014201	Bog	FWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQDVNLMYYQFDWAGASVPQVMEILCARDSGRVVEITLAFPSL*
Ga0182024_126532782	3300014501	Permafrost	ASFLDSKNWVTGHGLHTGNPQDRVVELYGEPSSSGPAVKNGEETILLFYQFDWAGSDVPQVMQVLCARDTGRVLEITLAFPSL*
Ga0181536_103612271	3300014638	Bog	KNWVTGQGLHIGDSQDQIVGLYGEPNSSGPATKNGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAYPSL*
Ga0157379_104107131	3300014968	Switchgrass Rhizosphere	RPDFLDPRNWLTGLGLRMGDSQDRVVAVYGEPNSGGPASKNGQDLVLLYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0132258_128017923	3300015371	Arabidopsis Rhizosphere	TTLGTPEGKCSDRRPDFLDPRNWLTGLGLRMGDSQDRVVAVYGEPNSGGPASKNGQDLVLFYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL*
Ga0187802_104279371	3300017822	Freshwater Sediment	GKCSDRRPDFLDPKYWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELDMMYYQFDWAGSDVPQVMEILCARDNGRVVEITLAYPSL
Ga0187801_104020692	3300017933	Freshwater Sediment	SGHHGKFIDDKDWQTGHGLRLGDSEDRVSELYGDANSAGPSVKGEHELELLYYAFDWAGSDVPQVMEILCARESGRVMEITLAYPSL
Ga0187819_100061216	3300017943	Freshwater Sediment	LTTLGTQEGKCSDKRPDFLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0187819_105253221	3300017943	Freshwater Sediment	TQEGKCSDRRPDFLDPRNWLTGLGLRMGDSQDRVTGLYGEPNSSGPASKNKQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0187783_105375941	3300017970	Tropical Peatland	SRGLHLGDTQDRVSELYGEPKSSGPSVRGSTELEFLYYPFDWAGSDVPQAMEIYCARDTGKVVEMTLAFPNL
Ga0187823_101693622	3300017993	Freshwater Sediment	PDFLDPRNWLTGLGLRMGDSQDRIVGLYGEPNSSGPASKHGQDLELLYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0187891_12665751	3300017996	Peatland	SITITTLGSREGKCGELRANFLESKNWVTGLGLRIGDSQDRVIEFYGDPNSSGPAVKNGHELELMFYQFDWAGPEVPQVMEVLCARDTGRVVEIMLAFPSL
Ga0187804_103262452	3300018006	Freshwater Sediment	CSDRRPDFLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQDLELMYYQFDWAGSDVPQVMEVLCARDSGRVVEITLAFPSL
Ga0187805_100312523	3300018007	Freshwater Sediment	LELKNWITGKGLFLGDPQDRVVELYGEPNSTGPSEKQGHALELMYYQFDWAGSEVPQVMEILCDRETGKVAEITLAFPSL
Ga0187810_104585701	3300018012	Freshwater Sediment	RRTDVLDEKDWITGQGLHLGDPQDRVAELYGEPNSSGPSVKGDTELEFLYYPFDWAGSDVPQAMEIYCARDTGKIVEITLAYPSL
Ga0187881_104134302	3300018024	Peatland	RDVIHEDQWQTGHGLRLGDSQDRVTQLYGDPNSSGPSVKGKHELELLFYAFDWAGSSVPQVMEVSCARDSGRVMEITLANASL
Ga0187871_108626041	3300018042	Peatland	DRRPDFLDPRNWLTGLGLRVGDSQDRVVSFYGEPNSSGPASKNGQELSLMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0210404_102281521	3300021088	Soil	PDFLDPKYWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELEMMYYQFDWAGSDVPQVMEILCARENGRVVEITLAYPSL
Ga0210405_103722551	3300021171	Soil	EGKCSDRRPDFLDPRFWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNRQELEMMYYQFDWAGSDVPQVMEVFCARDTGRVVEITLAFPSL
Ga0210405_106423901	3300021171	Soil	CSDRRPDFLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNRQELDMMYYQFDWAGSDVPQVMEILCARDTGRVVEITLAFPSL
Ga0210384_105016943	3300021432	Soil	RNWLTGLGLRMGDSQDRVVGLYGEPNSGGPASKNGQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0210391_100212981	3300021433	Soil	SVTLTTLGHQEGKCTDRRPDFLDPRYWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELDLMYYQFDWAGSAVPQVMEILCARDTGRVVEITLAFPSL
Ga0242655_101406581	3300022532	Soil	NWLTGLGLRIGDSQDRVYGLYGEPNSNGPASKNGQEFSLFHYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFAGS
Ga0224564_10758571	3300024271	Soil	RNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0207646_112714232	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QTKLWKTGRGLKLGDPRDRVLELYGEPNSSGPSEKGSHELELLFYAFDWAGSDVPQVMEVFCDRATGRVVEITLAFQSL
Ga0209131_12198972	3300026320	Grasslands Soil	GLRIGDSQDRVVDYYGEPNSSGPAAKNGQELQLMFYQFDWAGSDVPQAMEVLCARDSGRVVEITLAFPSL
Ga0257179_10333802	3300026371	Soil	IGDPQDRIIDYYGEPNSSGPAAKNGQELELMSYQFDWAGSDVPQAMEVLCARDTGRVVEITLAFPSS
Ga0257168_11532911	3300026514	Soil	GVGLRIGDSQDRVVDYYGEPNSSGPAAKNGQELQLMFYQFDWAGSDVPHAMEVLCARDSGRVVEITLAFPSL
Ga0208043_10529783	3300027570	Peatlands Soil	GTQEGKCSDRRPDFLDPRNWLTGLGLRMGDSQDRVTGLYGEPNSSGPASKNRQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0209217_10077402	3300027651	Forest Soil	MEVDSKNWVTGVGLRIGDSQDRIVDFYGEPNSSGPAAKNGQELELLFYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0209068_100669852	3300027894	Watersheds	VTPQHGSQDRVVDYYGEPNSSGPAAKNGQELQLMFYQFDWAGSDVPQAMEVLCARDSGRVVEITLAFPSL
Ga0209698_104964482	3300027911	Watersheds	TTLGSQTGTCKDRPGEFLDARNWVTGQGLRIGDSQDRVTDFYGEPNSSGPASKNGKDLALMYYQFEWAGSNVPQVMEVLCARDTGRVVEITLAFPDL
Ga0209698_113697541	3300027911	Watersheds	CNERPAEFLDAKNWVTGLGLRIGDSQDRVTGFYGEPNSSGPASKNGQDLALMFYQFDWAGSDVPQVLEVLCARDTGRVVEITLAYPSL
Ga0209526_100095796	3300028047	Forest Soil	NWVTGVGLRIGDPQDRIIDFYGEPNSSGPAAKNGQELELMAYQFDWAGPDVPQAMEVLCARDTGRVVEITLAFASL
Ga0302234_102590592	3300028773	Palsa	TGRGLHLGDPQDRVTELYGDPNSSGPSVKGRHELELMYYAFDWAGSSVPQVMEVFCARDSGRVMEITLAYPSL
Ga0308309_115464982	3300028906	Soil	KCSDRRQDLLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0311368_103336641	3300029882	Palsa	GACSGRHGDALHEDQWQTGRGLHLGDPQDRVTELYGDPNSSGPSVKGRHELELMYYAFDWAGSSVPQVMEVFCARDSGRVMEITLAYPSL
Ga0311354_103408322	3300030618	Palsa	EDQWQTGRGLHLGDPQDRVTELYGDPNSSGPSVKGRHELELMYYAFDWAGSSVPQVMEVFCARDSGRVMEITLAYPSL
Ga0316363_100304571	3300030659	Peatlands Soil	SDTGACKGNRKLVDDKDWQTGHGLRLGDSQDRVFELYGDANSAGPSVKGDRELELLYYAFDWAGSDVPQVMEILCARESGRVMEITLAYPSL
Ga0265763_10393602	3300030763	Soil	RPDFLDPRNWLTGLGLRMGDSQDRVTGLYGEPNSSGPASKNRQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0073994_100524671	3300030991	Soil	VEFLDPKNWVTGTGLRIGDPQDRIIDYYGEPNSSGPAAKNGQELELMSYQFDWAGSDVPQAMEVLCARDTGRVVEITLAFPSS
Ga0073994_124136441	3300030991	Soil	KNWVTGVGLRIGDPQDRIIDFYGEPNASGPASKNGQELELMSYQFDWAGSDVPQAMEVLCARDTGRVVEITLAFPSS
Ga0265760_102542791	3300031090	Soil	TITTLGSQEGKCSDRRPDFLDPRNWLTGLGLRMGDSQDRVIGLYGEPNSSGPASKNGQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0170824_1182066531	3300031231	Forest Soil	LGLHIGDSQDQIVGLYGEPNSSGPATKNGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0302307_104617641	3300031233	Palsa	ALHEDQWQTGRGLHLGDPQDRVTELYGDPNSSGPSVKGRHELELMYYAFDWAGSSVPQVMEVFCARDSGRVMEITLAYPSL
Ga0265339_103170601	3300031249	Rhizosphere	GKCGEKHLDFLDPKNWVTGEGLRIGDSQDRILGFYGEPNSSGPAAKNGKELDLMYYQFDWAGSEVPQVMEVLCARDTGRVVEITLAFPSL
Ga0310686_1147212221	3300031708	Soil	SDRRPDFLDPRFWLTGLGLRMGDSQERVVGLYREPNSGGPASKNGQELDLMYYQFDWAGSEVPQVMEVLCARDTGRVVEITLAFPSL
Ga0307477_102149983	3300031753	Hardwood Forest Soil	QEGKCSDRRPDFLDPKNWVTGMGLRMGDSQDRVAGLYGEPNSSGPASKNGQELELMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0307475_106170842	3300031754	Hardwood Forest Soil	KKVDFLDPRNWVTGLGLRIGDSQDQIVGLYGEPNSSGPATKNGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0307473_104382222	3300031820	Hardwood Forest Soil	KNWSTGVGLRIGDSQDRVVDFYGEPNSSGPAAKNGQELELLFYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0307478_113879411	3300031823	Hardwood Forest Soil	LTTLGTQEGKCSDRRPDFLDPRFWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELELLYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0214473_103169431	3300031949	Soil	TGYGVRMGDPQDRIYAAYGEPNSSGPSVHRGHELELLFYQFDWAGSDVPQVMEVLCARDTGRVVQITLAFPSL
Ga0307479_120842511	3300031962	Hardwood Forest Soil	GTQEGKCSDRRPDFLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNGQELALMYYQFDWAGSEVPQVMEVLCARDTGRVVEITLAFPSL
Ga0307471_1017624501	3300032180	Hardwood Forest Soil	FLDPRNWVTGLGLRIGDSQDQIVGLYGEPNSSGPATKNGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0307472_1007612012	3300032205	Hardwood Forest Soil	DRRPDFLDPRNWLTGLGLRMGDSQDRVVGLYGEPNSSGPASKNRQELEMMYYQFDWAGSDVPQVMEILCARDTGRVVEITLAFPSL
Ga0348332_140233121	3300032515	Plant Litter	KCSDRRPDFLDPRNWLTGLGLRMGDSQDRVSGLYGEPNSGGPASKNGQELELMHYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0335080_116272841	3300032828	Soil	NWVTGLGLRIGDSQDRVADLYGEPNSSGPASKSGQELALMYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0335077_120373162	3300033158	Soil	AKNWMTGLGLRIGDSQDHIVGIYGEPNSSGPATKNGQELALLYYQFDWAGSDVPQVMEVLCARDTGRVVEITLAFPSL
Ga0326728_112111771	3300033402	Peat Soil	TLGSREGKCGDRRADFLESKNWVTGLGLRIGDSQDRIIEFYGDPNSSGPAVKNGVELELMFYQFDWAGSEVPQVMEVLCARDTGRVVEITLAFPSL
Ga0371489_0094004_2_280	3300033755	Peat Soil	DQEKCNDRPARILNDKDWQTGHGLRLGDSQDRVTELYGDANSAGPSVKGERELELLYYAFDWAGSDVPQVMEILCARESGRVMEITLAYPSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103828

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences