Metagenome / Metatranscriptome Family F103821

Basic Information
Family ID	F103821
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	64 residues
Representative Sequence	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNF
Number of Associated Samples	86
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.663 % of family members)
Environment Ontology (ENVO)	Unclassified (42.574 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.475 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1Ga0062387_1016609321 2Ga0062389_1044819642 3Ga0066395_105263132 4Ga0070710_103376081 5Ga0075028_1004450811 6Ga0075026_1008413852 7Ga0075018_103748891 8Ga0099830_102852303 9Ga0126380_105347792 10Ga0126380_113965981 11Ga0126378_118546222 12Ga0126379_101099543 13Ga0126381_1032120952 14Ga0164309_111726582 15Ga0181532_100645413 16Ga0182036_102151183 17Ga0182033_104482061 18Ga0182033_116887262 19Ga0182040_102384471 20Ga0182040_105496683 21Ga0182040_105516662 22Ga0182037_101982791 23Ga0182037_116095712 24Ga0182039_106899741 25Ga0182039_109875311 26Ga0182039_115981992 27Ga0181511_11365911 28Ga0187818_100357063 29Ga0187820_10526452 30Ga0187814_102313112 31Ga0187785_100923083 32Ga0187777_114011191 33Ga0187782_112985691 34Ga0187804_103095402 35Ga0187810_100794741 36Ga0187765_105487052 37Ga0187769_106510492 38Ga0210399_107721142 39Ga0210401_108502802 40Ga0210396_107879851 41Ga0210393_109414962 42Ga0210386_117737141 43Ga0210394_103745473 44Ga0210390_113433241 45Ga0210409_100713981 46Ga0126371_102942373 47Ga0126371_109643822 48Ga0247695_10154132 49Ga0207852_10218632 50Ga0207761_10556862 51Ga0209588_12639401 52Ga0209446_11854051 53Ga0209060_103399431 54Ga0209693_101809091 55Ga0209465_102383101 56Ga0209275_102702341 57Ga0209006_101179053 58Ga0265350_1050162 59Ga0170823_136448533 60Ga0318534_101376533 61Ga0318538_100265933 62Ga0318496_103592642 63Ga0318501_108411582 64Ga0307468_1023275652 65Ga0307475_101723054 66Ga0318546_109278612 67Ga0318547_102730531 68Ga0318550_104134362 69Ga0318550_105077142 70Ga0318567_108397541 71Ga0318511_104144882 72Ga0318512_101326611 73Ga0306919_105538861 74Ga0306925_114032681 75Ga0318520_100844211 76Ga0306923_108338502 77Ga0306923_109234811 78Ga0306923_124128362 79Ga0310912_106683581 80Ga0310913_104688463 81Ga0310913_110463582 82Ga0310910_102920493 83Ga0310909_102631721 84Ga0310909_108520681 85Ga0318563_104565032 86Ga0318507_102351452 87Ga0318510_100448881 88Ga0318577_100649411 89Ga0311301_126958321 90Ga0307470_101071783 91Ga0307471_1013241642 92Ga0307472_1006940902 93Ga0306920_1001489224 94Ga0306920_1016188432 95Ga0335078_117205561 96Ga0335083_100428105 97Ga0335084_102910341 98Ga0335077_111607352 99Ga0310914_103686151 100Ga0318519_100607913 101Ga0318519_110194291
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1Ga0062387_1016609321 2Ga0066395_105263132 3Ga0075026_1008413852 4Ga0075018_103748891 5Ga0099830_102852303 6Ga0126380_105347792 7Ga0126379_101099543 8Ga0164309_111726582 9Ga0182036_102151183 10Ga0182033_116887262 11Ga0182037_101982791 12Ga0182039_106899741 13Ga0187820_10526452 14Ga0187785_100923083 15Ga0187777_114011191 16Ga0187782_112985691 17Ga0187804_103095402 18Ga0187765_105487052 19Ga0210401_108502802 20Ga0210386_117737141 21Ga0210394_103745473 22Ga0207761_10556862 23Ga0209060_103399431 24Ga0209275_102702341 25Ga0318534_101376533 26Ga0335078_117205561 27Ga0335077_111607352
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 1Ga0182033_104482061 2Ga0062389_1044819642 3Ga0070710_103376081 4Ga0075028_1004450811 5Ga0075018_103748891 6Ga0099830_102852303 7Ga0126380_105347792 8Ga0126378_118546222 9Ga0126379_101099543 10Ga0182040_102384471 11Ga0182037_101982791 12Ga0181511_11365911 13Ga0187818_100357063 14Ga0187820_10526452 15Ga0187814_102313112 16Ga0187777_114011191 17Ga0187782_112985691 18Ga0187765_105487052 19Ga0187769_106510492 20Ga0210399_107721142 21Ga0210401_108502802 22Ga0210396_107879851 23Ga0210393_109414962 24Ga0210390_113433241 25Ga0126371_102942373 26Ga0207761_10556862 27Ga0209588_12639401 28Ga0209446_11854051 29Ga0209060_103399431 30Ga0209693_101809091 31Ga0318501_108411582 32Ga0306925_114032681 33Ga0307471_1013241642 34Ga0335078_117205561 35Ga0335083_100428105 36Ga0335084_102910341
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 65.96% β-sheet: 0.00% Coil/Unstructured: 34.04%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03544	TonB_C	97.03
PF13426	PAS_9	1.98
PF13492	GAF_3	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	97.03

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	12.87%
Terrestrial	Environmental → Terrestrial	87.13%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	9.90%
Sediment	Environmental → Aquatic → Sediment	2.97%
Soil	Environmental → Terrestrial → Soil	87.13%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	7.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.91%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.97%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.99%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.97%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M

Showing 1 to 10 of 86 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1016609321	3300004091	Bog Forest Soil	MTIKKQLYRSFGGVLLILLILLVVDIASIWKASMASSEASATLTSERTVESVRYQIMQNRLNLNNFLLS
Ga0062389_1044819642	3300004092	Bog Forest Soil	MTIKKQLYRSFGGVLLILLILLVVDIASIWKASMASSEASATLTSERTVESVRYQIMQNRLNLNNFLLSGD
Ga0066395_105263132	3300004633	Tropical Forest Soil	MSIGKQLYRGFGVILAILAVLLVVNLAALWKARSASNEASATLESVRTAEAVRYQIMQNRLNL
Ga0070710_103376081	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTIKTQLYRGFGGIGLILLILLLVDIGTIWKASRASSEASSTLENVRTTEAVRYQIMQNRLNLNNFLLSGDPR
Ga0075028_1004450811	3300006050	Watersheds	MTIKQQLYRSFGAILLILLILLFVDIGSIWKASSASSEASATLESVRTIGDVRDQIMQNRLNLNNFLL
Ga0075026_1008413852	3300006057	Watersheds	MTIGKQLYRSFGTILAILFVLLVVDLATIYKARTASSEAAATLESVRTAEA
Ga0075018_103748891	3300006172	Watersheds	MTIRRQLYKGFLIVLGALVLLLVADLVALWKAKAASSEAAATLGAVRMAGEVRYQIMQNRLNLNNFLLS
Ga0099830_102852303	3300009088	Vadose Zone Soil	MTIGKQLYRNFGYILGALVLLLMVDVVAIWKANSANKEAAATVESLRTNEAVRYKIMQNRLNLN
Ga0126380_105347792	3300010043	Tropical Forest Soil	MTIGKQLYKSFGTIILALLFLLIVDIGSIWKARSAGNDVANTLESVRTTEAVRYQIMQNRLNLNNFLLSGDPRDEDKVNK
Ga0126380_113965981	3300010043	Tropical Forest Soil	MTIGKQLYKSFGTILAILLGLLIVDVGSIWKASSARNEASGTLESVRTIEAVRYQIMQNRLNLNNFLLSGDPRDEDKVNKG
Ga0126378_118546222	3300010361	Tropical Forest Soil	MSIGKQLYRGFGVILAILAVLLVVNLAALWKARSASNEASATLESVRTAEAVRYQIM
Ga0126379_101099543	3300010366	Tropical Forest Soil	MTIGKQLYKSFGTILAILLGLLIVDVGSIWKASSARNEASGTLESVRTIEAVRYQIMQNRLNLNNFLL
Ga0126381_1032120952	3300010376	Tropical Forest Soil	MTIGKQLYRGFGVILVMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFLLSG
Ga0164309_111726582	3300012984	Soil	MTIKTQLYRGFGGIGLILLILLLVDIGTIWKASRASSEASSTLENVRTTEAVRYQIMQNRLNLNNFLLSGDPRD
Ga0181532_100645413	3300014164	Bog	MTIGRQLYKGFGVVLAILALLLFVDLGALWKARSASNEAAATLESVRMAENVRYQIMQN
Ga0182036_102151183	3300016270	Soil	MTIRNQLYKGFGVVLGILLLLLAADLVALIMARSASRDAAATLDTKTTAESVRYQIMQ
Ga0182033_104482061	3300016319	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNF
Ga0182033_116887262	3300016319	Soil	MTIARQLYKGFGAVLGILVLLFFVDLGALWKAHSASNEAAATLESVRT
Ga0182040_102384471	3300016387	Soil	MTIGQKLYRGFGLILGILAVLLIVDLGAIWKARTASAEAKATLESVRTAEAVRYQIMQNRLNLNNF
Ga0182040_105496683	3300016387	Soil	MTIGKQLYRGFGVILVMLATLLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLN
Ga0182040_105516662	3300016387	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNR
Ga0182037_101982791	3300016404	Soil	MTIRYQLYKGFGIVLIILAFLLVVDLGVLWKARNASSDASATLEAFRTAGAVRDKIMENRLNLNNFLLSG
Ga0182037_116095712	3300016404	Soil	MTIGKQLYRGFGVILVMLATLLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNL
Ga0182039_106899741	3300016422	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLETVRTAEAVRYQIMQNRLNLNNFLLSGDPRDEDKVN
Ga0182039_109875311	3300016422	Soil	MTIGKQLYRGFGVILAMLAVLLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFLL
Ga0182039_115981992	3300016422	Soil	MTIRYQLYKGFGIVLIILAFLLVVDLGVLWKARNASSDASATLEAFRTAGAVRDKIMENRLNLNNFLL
Ga0181511_11365911	3300016702	Peatland	MTIGRQLYRGFGVVLAILALLLFVDLGALWKARSASNEAAATLESVRMAENVRYQIMQNRLNLNNFLLSG
Ga0187818_100357063	3300017823	Freshwater Sediment	MTIGKQLYRGFGIVLAILALLLFVDLGALWKAKSSSNEAAATLESVRTAEAVRNKIMENRLNL
Ga0187820_10526452	3300017924	Freshwater Sediment	MTIRNQLYKGFGIVLGILALLLIVDVAALWKAHSATTEAGATLDSVRIAETVRNQIMQ
Ga0187814_102313112	3300017932	Freshwater Sediment	MTIGQQLYKGFGVILAILALLLFVDLGALWRAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFL
Ga0187785_100923083	3300017947	Tropical Peatland	MTIRQQLYKGFGVVLGMLALLLVVDLAALWTARKANQEASGTLETVRTAEAVRYQIMQNR
Ga0187777_114011191	3300017974	Tropical Peatland	MTIRLQLYRGFGLILGTLLLLFVVDLVSLYMARSANKDASATLESVRTTEAVRYQIMQNR
Ga0187782_112985691	3300017975	Tropical Peatland	MSIRNQLYKGFGVILAILAILLIVDVGALWKARSASDEAAATLESVRLAEAVRYQMMQN
Ga0187804_103095402	3300018006	Freshwater Sediment	MTIGKQLYRGFGIVLAILALLLFVDLGALWKAKSASNEAAATLESVRTAEAVRNKIME
Ga0187810_100794741	3300018012	Freshwater Sediment	MTIGQQLYKGFGVILAILALLLFVDLGALWKARVASNEAAATLESVRTAEAVRYQIMQNRLNLNNFLL
Ga0187765_105487052	3300018060	Tropical Peatland	MTIGKQLYKSFGTILGILSLLFIVDVVSLLMARSASNDVSNTLASERTIGEVRNQIMQNRLNLNNFLLSGD
Ga0187769_106510492	3300018086	Tropical Peatland	MTIGKQLYKGFGIILAILAVLLVVDLLALWKARSASNEAAATLDSVRTAEAVRYQIMQNRLNLNNFLLS
Ga0210399_107721142	3300020581	Soil	MTIKQQLIRSFGTILGILVVLLIVDSLSIWKASSASSEAASTLDSVRTIESVRYQIMQNRLNLNNF
Ga0210401_108502802	3300020583	Soil	MTIKQQLYRGFGLILLILAILLIVDVGSLLKAQRASGEAASTLEGVRTTENVRYQIMQNRLNLNNFL
Ga0210396_107879851	3300021180	Soil	MTIKQQLYRSFGAILLILLILLVVDVGSIWKASSASTEAANTLDSVRTIGDVRFQIMQNRLNLNNFLLSGD
Ga0210393_109414962	3300021401	Soil	MTIKQQLYRGFGLILITLAVLLLVDVGSLLKAQRASSEAASTLEGYRTTENVRNQIMQNRLNLNNF
Ga0210386_117737141	3300021406	Soil	MTIKQQLYRSFGAILLILLILLFVDIGSLWKANSASAEASNALDSKTTIELVRSKIMENRLNLNNFLL
Ga0210394_103745473	3300021420	Soil	MTIGRQLYKGFGVVLVILALLLFVDLGALWKAHTASNEAAAPLESVRMTENVRYQIMQNRLNL
Ga0210390_113433241	3300021474	Soil	MTIKQQLYRSFGAILLILLILLFVDIGSIWKASSASGEASNALESKTTIELVRSQIMQNRLNLNNFLLSGDPR
Ga0210409_100713981	3300021559	Soil	MTIKTQLYRGFGGIGLILLILLLVDIATIWKASRASNEASSTLENVRTTEAVRYQIMQNRLNLNNF
Ga0126371_102942373	3300021560	Tropical Forest Soil	MTIGKQLYKGFGIVLGILVLLLIVDVVALWRAHSAATDAGTTLESVRMAENVRFQIMQNR
Ga0126371_109643822	3300021560	Tropical Forest Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFLLSGD
Ga0247695_10154132	3300024179	Soil	MTIKQQLYRSFGAILLILLILLFVDIGSIWKASSASSEASNTLESVRTIEAVRYQIMANRLNLNNFLLS
Ga0207852_10218632	3300026959	Tropical Forest Soil	MTIGKQLYRSFGTILGILFVLLVVDLGTVYKARSASSEAAATLDSVRTA
Ga0207761_10556862	3300027516	Tropical Forest Soil	MTIGKQLYRSFGTILGILFVLLVVDLGTVYKARSASSEAAATLDSVRTAEAARYQIMLNRLNLNNFLLSGDPRDE
Ga0209588_12639401	3300027671	Vadose Zone Soil	MTIKQQLYKSFGTILAILVGLLIVDIGSIWIATAARNQASSTLESVRTIESVRLQIMQNRLNLNNFLLSGDP
Ga0209446_11854051	3300027698	Bog Forest Soil	MTIGKQLYKGFGVVLGILVLLLFVDLAALALARSANKDAASTLESVRTAENVRYQIMQNRLNLNNFLLSGDPRDEDKV
Ga0209060_103399431	3300027826	Surface Soil	MTIGTQLKRNFGYILGALVLLLIVDVAALWKAGLANDEASAAAESLRVTESVRYQIMLNRLNLNNFL
Ga0209693_101809091	3300027855	Soil	MTIKQQLYKSFGTILAILVGLLIVDIVSIWIASSARNQASSAMDSVRTIESVRSKIMENRLNLNNFLLS
Ga0209465_102383101	3300027874	Tropical Forest Soil	MSIGKQLYRGFGVILAILAVLLVVNLAALWKARSASNEASATLESVRTAEAVRYQIMQNRLNLNNF
Ga0209275_102702341	3300027884	Soil	MTIKQQLYKSFGTILAILVGLLIVDIVSIWIASSARNQASSAMDSVRTIESVRSKIMENRLNLNNFLLSGDPRD
Ga0209006_101179053	3300027908	Forest Soil	MTIKQQLYRSFGAILLILLILLFVDIGSIWKASSASSEAANALDSVRTIGEVRNQIMQNRLNLNN
Ga0265350_1050162	3300028013	Soil	MTIKQQLYRGFGLILIILAVLLLVDVGSLLKAQRASSEAASTLEGVRTTENVRYQIMQNRLNLNNFLLSG
Ga0170823_136448533	3300031128	Forest Soil	MTIKTQLYRGFGGIGLILLILLLVDIGTIWKASRASSEASSTLENVRTTEAVRYQIMQNRLNLN
Ga0318534_101376533	3300031544	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRT
Ga0318538_100265933	3300031546	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLETVRTAE
Ga0318496_103592642	3300031713	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFLLSGDPRDEDKVN
Ga0318501_108411582	3300031736	Soil	MTIRNQLYKGFGVVLGILLLLLAADLVALIMARSASRDAAATLDTKTTAESVRYQIMQNRLNLNNFLLSGDP
Ga0307468_1023275652	3300031740	Hardwood Forest Soil	MTIKTQLYRGFGGIGLILLILLLVDIGTIWKASRASSEASSTLESVRTTEAVRYQIMQNR
Ga0307475_101723054	3300031754	Hardwood Forest Soil	MTIKTQLYRGFGGIGLILLILLLVDIATIWKASRASNEASSTLENVRTTEAVRYQIMQNRLNLNNFLLSGDPRDE
Ga0318546_109278612	3300031771	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLETVRTAEAVRYQIMQNRLNLNNFLLSGDPRD
Ga0318547_102730531	3300031781	Soil	MTIGKQLYRGFGVILVMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRY
Ga0318550_104134362	3300031797	Soil	MTIGKQLYRGFGVILVMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNN
Ga0318550_105077142	3300031797	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNN
Ga0318567_108397541	3300031821	Soil	MTIRYQLYKGFGIVLIILAFLLVVDLGVLWKARNASSDASATLEAFRTAGAVRDKIMENRLNLNNFLLSGDPRDEDK
Ga0318511_104144882	3300031845	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLETVRTAEAVRYQIMQNRLNLNN
Ga0318512_101326611	3300031846	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEA
Ga0306919_105538861	3300031879	Soil	MTIGQKLYRGFGLILGILAVLLIVDLGAIWKARTASAEAKATLESVRTAEAVRYQIMQNRLNLNNFLLSGDPRDE
Ga0306925_114032681	3300031890	Soil	MTIGKQLYKSFGTIIGMLLFLLIVDVISIWKARSASNEAKNTVESVQTIESVRYQIMQNRLNLNNFLLSGDPRD
Ga0318520_100844211	3300031897	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFLLS
Ga0306923_108338502	3300031910	Soil	MTIGKQLYRGFGVILVMLAILLVVDLAALWKAKSASNEAAATLESVRTA
Ga0306923_109234811	3300031910	Soil	MTIGKQLYRGFGVILAVLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFLLSGD
Ga0306923_124128362	3300031910	Soil	MTIGKQLYKGFGIVLGILVLLLIVDVVALWRAHSAATDAGTTLESVRMAENVRYQIMQNR
Ga0310912_106683581	3300031941	Soil	MTIGKQLYRGFGVILAVLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQN
Ga0310913_104688463	3300031945	Soil	MTIGKQLYRGFGVILAVLAILLVVDLAALWKAKSASNEAAATLESVRTA
Ga0310913_110463582	3300031945	Soil	MSIGKQLYRGFGVILAILAVLLVVNLAALWKARSASNEASATLESVRTAEAVR
Ga0310910_102920493	3300031946	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFLLSGDP
Ga0310909_102631721	3300031947	Soil	MTIGQKLYRGFGLILGILAVLLIVDLGAIWKARTASAEAKATLESVRTAEAVRYQIMQNRLNL
Ga0310909_108520681	3300031947	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLDSVRTAEAVRYQIMQNRLNLN
Ga0318563_104565032	3300032009	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRY
Ga0318507_102351452	3300032025	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAV
Ga0318510_100448881	3300032064	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFL
Ga0318577_100649411	3300032091	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAE
Ga0311301_126958321	3300032160	Peatlands Soil	MTIGRQLYKGFAVVLSILALLLFVDLGALWKARSASNEAAATLESVRTAES
Ga0307470_101071783	3300032174	Hardwood Forest Soil	MTIKQQLYRSFGAILLILLILLFVDIGSLWKASSASTEASNALDSKTTIELVRSKIMENRLNLNNFL
Ga0307471_1013241642	3300032180	Hardwood Forest Soil	MTIEKQLYRSFGAIGAILLILLLVDIGTIWKASRASSEASATLESVRTTEAVRYQIMQNRLNLNNFLLSGDPRDEEKVN
Ga0307472_1006940902	3300032205	Hardwood Forest Soil	MTIEKQLYRSFGAIGAILLILLLVDIGTIWKASRASSEASATLESVRTTEAVRYQIMQNRLNLNNFLL
Ga0306920_1001489224	3300032261	Soil	MTIGKQLYRGFGVILAMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQ
Ga0306920_1016188432	3300032261	Soil	MTIGKQLYRGFGVILVMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQ
Ga0335078_117205561	3300032805	Soil	MSIGKQLYRGFGVILAILAFLLVVDLAALLKARSAGSDASATLDGVRVAESV
Ga0335083_100428105	3300032954	Soil	MTIRQQLYKGFGVVLGILALLLIVDLVALYTARKASQEAASTLETVRTAEAVRYQIMQNR
Ga0335084_102910341	3300033004	Soil	MTIRQQLYKGFGVVLGMLALLLVVDLAALWTARKANQEASGTLETVRTAEAVRYQIMQNRLNLNNFLLSGDPRD
Ga0335077_111607352	3300033158	Soil	MTIEKQLYRSFGAIGAILLVLLLVDIGTIWKASRASSEASATLESVRTTEAVRYQIMQNR
Ga0310914_103686151	3300033289	Soil	MTIGKQLYRGFGVILVMLATLLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQN
Ga0318519_100607913	3300033290	Soil	MTIGKQLYRGFGVILVMLAILLVVDLAALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLN
Ga0318519_110194291	3300033290	Soil	MTIGKQLYRGFGVILAMLAILLVVDLVALWKAKSASNEAAATLESVRTAEAVRYQIMQNRLNLNNFL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103821

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences