Metagenome Family F103816

Overview

Basic Information

• Family ID: F103816
• Family Type: Metagenome
• Number of Sequences: 101
• Average Sequence Length: 40 residues
• Representative Sequence: NQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVV
• Number of Associated Samples: 62
• Number of Associated Scaffolds: 101

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 9.90 %
• % of genes near scaffold ends (potentially truncated): 63.37 %
• % of genes from short scaffolds (< 2000 bps): 82.18 %
• Associated GOLD sequencing projects: 54
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (61.386 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.762 % of family members)
• Environment Ontology (ENVO): Unclassified (35.644 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (51.485 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 47.62%
  β-sheet: 0.00%
  Coil/Unstructured: 52.38%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13676	TIR_2	2.97
PF16095	COR	2.97
PF12799	LRR_4	2.97
PF00106	adh_short	2.97
PF07723	LRR_2	1.98
PF00560	LRR_1	1.98
PF13516	LRR_6	1.98
PF02826	2-Hacid_dh_C	0.99
PF03200	Glyco_hydro_63	0.99
PF01909	NTP_transf_2	0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4886	Leucine-rich repeat (LRR) protein	Transcription [K]	1.98
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.99
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.99
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.99
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.99
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.99
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.99
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.99
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.99
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.99

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	38.61 %
Unclassified	root	N/A	61.39 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	38.61 %
Unclassified	root	N/A	61.39 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.61 %
Unclassified	root	N/A	61.39 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %
Unclassified	root	N/A	61.39 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.99 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.99 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.98 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	6.93 %
Unclassified	root	N/A	61.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.94 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.98 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5.94 %
Unclassified	root	N/A	61.39 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.99 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.96 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.99 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	2.97 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.99 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.98 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.97 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.99 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.99 %
Unclassified	root	N/A	61.39 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.96 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.99 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.99 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.98 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.97 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.99 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.99 %
Unclassified	root	N/A	61.39 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.96 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Desulfobulbus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus	0.99 %
Fimbriiglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus	2.97 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Leptolyngbya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya	0.99 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.99 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.99 %
Unclassified	root	N/A	61.39 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	1.98 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	2.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.96 %

Level 10

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Desulfobulbus oralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus oralis	0.99 %
Fimbriiglobus ruber	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	2.97 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1.98 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.97 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.99 %
Unclassified	root	N/A	61.39 %
unclassified Leptolyngbya	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya	0.99 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.96 %

Level 11

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Desulfobulbus oralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus oralis	0.99 %
Fimbriiglobus ruber	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	2.97 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Leptolyngbya sp. PCC 7375	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. PCC 7375	0.99 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1.98 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.97 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.99 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.99 %
Unclassified	root	N/A	61.39 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.96 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2035918004|FACENC_F56XM5W01BVNST	Not Available	519
3300002245|JGIcombinedJ26739_100854346	All Organisms → cellular organisms → Bacteria → Proteobacteria	791
3300003219|JGI26341J46601_10222761	Not Available	507
3300004152|Ga0062386_100223499	Not Available	1486
3300004152|Ga0062386_100281930	Not Available	1322
3300004152|Ga0062386_100383372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus oralis	1130
3300004152|Ga0062386_100588191	Not Available	909
3300004152|Ga0062386_100686705	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	840
3300004152|Ga0062386_100822244	Not Available	766
3300004152|Ga0062386_101330375	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	598

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.03%
Host-Associated	Host-Associated	2.97%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	19.80%
Plants	Host-Associated → Plants	2.97%
Terrestrial	Environmental → Terrestrial	77.23%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	18.81%
Peat	Environmental → Terrestrial → Peat	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.97%
Sediment	Environmental → Aquatic → Sediment	0.99%
Soil	Environmental → Terrestrial → Soil	76.24%

Type

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	8.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.93%

Subtype

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%

Habitat

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	13.86%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.97%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	11.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.99%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_5395670	2035918004	Soil	MTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVING
JGIcombinedJ26739_1008543461	3300002245	Forest Soil	XKPQNITDDIFLAQILGHKLLGPNASFSVGQSYKDFYIRNG*
JGI26341J46601_102227611	3300003219	Bog Forest Soil	KPKNMTEDIFIAEILGHKLLPGAAALSVGQSYKDFYVAGG*
Ga0062386_1002234991	3300004152	Bog Forest Soil	CHKFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVR*
Ga0062386_1002819301	3300004152	Bog Forest Soil	RSAYGAMCCHKFKPQNMTDVQILGHKLLGPNAVGQSYKDFYVK*
Ga0062386_1003833722	3300004152	Bog Forest Soil	PKNQTDDIFLAQILGHKLLGPNASLSVRQSYKDFYIRMP*
Ga0062386_1005881911	3300004152	Bog Forest Soil	CHMFKPKNITDDIFLAQILGHKLLGPNASLSVGQSYKDFYIRKP*
Ga0062386_1006867052	3300004152	Bog Forest Soil	HKFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYIRKR*
Ga0062386_1008222441	3300004152	Bog Forest Soil	MFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYIR*
Ga0062386_1013303752	3300004152	Bog Forest Soil	MIVPGNRHSRFKLKNITDDIFLAQILGHKILGPNASLSQSYKDFYVRLG*
Ga0062386_1015531383	3300004152	Bog Forest Soil	FKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVGA*
Ga0070707_1021805072	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YGAICCHLFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVETA*
Ga0070697_1014083021	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVETA*
Ga0066903_1087884891	3300005764	Tropical Forest Soil	KNQTDDIFLAQILGHQLLGPNASLSVGQSYKDFYVVGG*
Ga0070717_106705583	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	CHRFKPKNMTEDIFIAEILGHKLLPGATALSVGQRYKDFYVKS*
Ga0075018_106879571	3300006172	Watersheds	KPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYIRKP*
Ga0070716_1009985352	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	INMTEDIFIAEILGHKLLPGATALSVGQSYKDFYIRNG*
Ga0105242_118844021	3300009176	Miscanthus Rhizosphere	YGAICCHLFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVGD*
Ga0116135_10224232	3300009665	Peatland	MTDDIFLAQILGHKLLGPNAALSGGQSYKDFFVK*
Ga0126373_121021771	3300010048	Tropical Forest Soil	PKKQTDDIFLAKIIGHKLLGPNASLSVGQSYKGFYVV*
Ga0074046_100723611	3300010339	Bog Forest Soil	MCCHKFKPQNMTDVQILGHKLLGPNAVGQSYKDFYVK*
Ga0074046_109253552	3300010339	Bog Forest Soil	MTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVER*
Ga0074045_102347304	3300010341	Bog Forest Soil	FKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYISKV*
Ga0126381_1021059361	3300010376	Tropical Forest Soil	TDDIFLAQILGHKLLGPNASLSFGQSYNNFYVKR*
Ga0137363_100072661	3300012202	Vadose Zone Soil	ICCHLFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVGD*
Ga0137363_103203233	3300012202	Vadose Zone Soil	MTEDIFIAEILGHKLLPGATALSVGQSYKDFYIRKP*
Ga0137363_104773732	3300012202	Vadose Zone Soil	MTEDIFIAEILGHKLFPGATALSVGQSYKDFYVVETA*
Ga0137358_106824512	3300012582	Vadose Zone Soil	AYSAICCQKFKPQNMTDDIFISEILGHKLLPGAAALSVGQSYKDFYIRNG*
Ga0137359_104524342	3300012923	Vadose Zone Soil	MTEDIFLAQILGHKLLPGAAALSVGQSYKDFYVVGD*
Ga0182036_102762101	3300016270	Soil	ICCHKFKPQNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVG
Ga0182036_103250352	3300016270	Soil	MADDIFLAQILGHKLLPGAAGLSIGKSYKDFYVVGT
Ga0182036_106077441	3300016270	Soil	NMTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVKESPTKP
Ga0182036_114297761	3300016270	Soil	GAICRHRFKPKNMTDDIFLAQILGDELLGPNAVLSVGHSYKDFYVEA
Ga0182041_109064321	3300016294	Soil	SAYGAICCHKFKPRNQTDDIFLAQILGHELLAPNASLSVGQSYKDFYVAGE
Ga0182032_100457141	3300016357	Soil	NMTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVKESPIKP
Ga0182032_113905102	3300016357	Soil	CCHKFKPQNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVG
Ga0182040_105175211	3300016387	Soil	FKPRNQTDDIFLAQILGHKLLGPNAALSVGQSYKDFYVAGT
Ga0182040_113266732	3300016387	Soil	MADDIFLAQILGHKLLPGAAGLSVGQSYKDFYVVGM
Ga0182037_100486861	3300016404	Soil	ICCHKFKPQNQTDDIFLAQILGHKLLGPNPSLSVGQSYKDFYVVEK
Ga0182037_111715731	3300016404	Soil	NQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVV
Ga0182037_112843581	3300016404	Soil	KPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVAG
Ga0182039_105370271	3300016422	Soil	KFKPRNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVEG
Ga0182039_107356421	3300016422	Soil	PQNQTDDIFLAQILGHKLLGPNPSLSVGQSYKDFYVVEK
Ga0182038_100581946	3300016445	Soil	MADDIFLAQILGHKLLPGAAGLSIGKSYKDFYVVGM
Ga0187782_115267592	3300017975	Tropical Peatland	VDAPYGAICCPKFKPKNMTDDIFLAQILGHKLLPGTAALSVGQSYKDFYVRN
Ga0187863_101234043	3300018034	Peatland	NMTDDIFLAQILGHKLLGPNAALSGGQSYKDFFVK
Ga0187883_104603742	3300018037	Peatland	FCCHFFKPKNMTDDIFLAQILGHKLLGPNAALSGGQSYKDFFVK
Ga0187871_102002364	3300018042	Peatland	KNMTDDIFLAQILGHKLLGPNAALSVGQSYKDFYVA
Ga0210395_111011391	3300020582	Soil	KNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYIRKP
Ga0210404_108086742	3300021088	Soil	MESRPPVKRYGAICCHLFKPENITIDIFLAQILAHKPLPGAAALFVGQSYNDF
Ga0210408_101980062	3300021178	Soil	MESRPPAKRYGAICCHLFKPENITIDIFLAQILAHKPLPGAAALFVGQSYNDFYVAES
Ga0213872_100193873	3300021361	Rhizosphere	MTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVVASPHTK
Ga0213872_101331901	3300021361	Rhizosphere	RFKPKNMTDDIFLAEILGHKLLPGSAALSVGQSYKDFYVVD
Ga0213877_100046252	3300021372	Bulk Soil	MTDDIFLAEILGHKLLPGAAALSMGQSYKDFYVKE
Ga0213877_100895502	3300021372	Bulk Soil	ALRNMTDDIFLAQILGHKLLGPNASLSIGQSYKDFYVVGK
Ga0213877_102136451	3300021372	Bulk Soil	MTDDIFLAEILGHKLLPGAAALSVGQSYKDFYVKQ
Ga0210387_106957541	3300021405	Soil	QTIDIFLAQILGPNASLSVGQNHKDLHSLVLSPYC
Ga0213878_100233623	3300021444	Bulk Soil	MTPDIFMAEILGHKLLPGSAALSVGQSYKDFYVKQ
Ga0213878_100417491	3300021444	Bulk Soil	LIFPKNMTDDIFLGEILGHKLLPGTAALSVGQSYKDFHVVG
Ga0213878_100458152	3300021444	Bulk Soil	MYTALRNMTDDIFLAQILGHKLLGPNASLSIGQSYKDFYVVGK
Ga0213878_100477135	3300021444	Bulk Soil	MTDDIFMAEILGHKLLPGAAALSVGQSYKDFYVRN
Ga0213878_100626022	3300021444	Bulk Soil	MTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVKP
Ga0213878_100714872	3300021444	Bulk Soil	MTDDIFLAEILGHKLLPGAAALSVGQSYKDFYVVGK
Ga0213878_101040062	3300021444	Bulk Soil	MTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVAGK
Ga0213878_101577092	3300021444	Bulk Soil	LYAAFPGNMTDDIFLAEILGHKLLPGAAALSVGQSYKDFYVK
Ga0213878_104010171	3300021444	Bulk Soil	RFKPKNMTDDIFLAEILGHKLLPGAAALSVGQSYKDFFVK
Ga0210409_105773903	3300021559	Soil	AICCHLFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVETA
Ga0208691_11504701	3300025612	Peatland	PKNITDDIFLAQILGHKLLGPNASLSVGQSYKDFYIR
Ga0207684_108289453	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ICCQKFKPQNMTDDIFLAQILGHKLLGPNAALSVGQSYKDFYIRTP
Ga0207684_111460091	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GAICCHLFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVGD
Ga0207646_112774241	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTEDIFIAEILGHKLLPGATALSVGQSYKDFYVVGA
Ga0209656_1000233211	3300027812	Bog Forest Soil	MTDDIFLAQILGHKLLGPNVSLSVGQSYKDFYIRKP
Ga0209656_100343723	3300027812	Bog Forest Soil	MTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVER
Ga0209656_100445614	3300027812	Bog Forest Soil	MCCHKFKPQNMTDVQILGHKLLGPNAVGQSYKDFYVK
Ga0209040_100426183	3300027824	Bog Forest Soil	MQIKMTEIIFLAQILSPNASLSVGQSYKDFYIRKP
Ga0209040_103716332	3300027824	Bog Forest Soil	PKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYIR
Ga0302326_108546654	3300031525	Palsa	HKFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYIR
Ga0310915_106116062	3300031573	Soil	MADDIFLAQILGHKLLPGAAGLSIGQSYKDFYVVGM
Ga0306917_110807471	3300031719	Soil	HRFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVED
Ga0306918_110620441	3300031744	Soil	RNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVR
Ga0318521_108334152	3300031770	Soil	MTGDIFLAQILGHKLLGPNASLSVGQSYKDFYVVGG
Ga0310917_100463201	3300031833	Soil	HKFKPQNQTDDIFLAQILGHKLLGPNPSLSVGQSYKDFYVVEK
Ga0306919_101396904	3300031879	Soil	MTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVKESPTKP
Ga0306925_100929915	3300031890	Soil	MTEDIFIADILGHKLLPGAAALSVGQSYKDFYVVGD
Ga0306925_115283102	3300031890	Soil	IFLAQILGHKLLPGAAALSVGQSYKDFYVKESPTKP
Ga0310916_105401212	3300031942	Soil	MADDIFLAQILGHKLLPGAAGLSVGQSYKDFYVVGT
Ga0310913_101423172	3300031945	Soil	MTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVG
Ga0310910_105035901	3300031946	Soil	TDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVGG
Ga0310910_107692981	3300031946	Soil	ICCHKFKPRNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVGE
Ga0310909_101255274	3300031947	Soil	IFLAQILGHKLLPGAAALSVGQSYKDFYVKESPIKP
Ga0306926_113800051	3300031954	Soil	MTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVED
Ga0306922_102584912	3300032001	Soil	MTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVKESPIKP
Ga0318549_105441051	3300032041	Soil	PQNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVG
Ga0306924_101827131	3300032076	Soil	KFKPRNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVV
Ga0306920_1031345362	3300032261	Soil	KPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVV
Ga0335076_102430621	3300032955	Soil	DIFLAQILGHKLLGPNASLSVGQSYKDFYVDVKRF
Ga0335076_102832393	3300032955	Soil	MTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVVGG
Ga0335076_112127211	3300032955	Soil	AICCHRFKPRNMTDDIFLAEILGHKLLPGAAALSVGQSYKDFYVVGD
Ga0310914_100518001	3300033289	Soil	HKFKPRNQTDDIFLAQILGHKLLGPNASLSIGQSYKDFYVVWK
Ga0310914_111509001	3300033289	Soil	ICCHLFKPRNMTDDIFLAQILGHKLLPGAAALSVGQSYKDFYVKESPIKP
Ga0310914_114072502	3300033289	Soil	ICCHKFKPKNQTDDIFLAQILGHKLLGPNASLSVGQSYKDFYVVGD