Metagenome Family F103770

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103770
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	49 residues
Representative Sequence	MRHGRCLAAFLGVLLWGAAGHADITNTTPYDYDSPPRPGKEQGTYMAAA
Number of Associated Samples	78
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	91.09 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.010 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (39.604 % of family members)
Environment Ontology (ENVO)	Unclassified (67.327 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.287 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.87% β-sheet: 0.00% Coil/Unstructured: 70.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00296	Bac_luciferase	2.97
PF13417	GST_N_3	1.98
PF00005	ABC_tran	1.98
PF00526	Dicty_CTDC	0.99
PF12697	Abhydrolase_6	0.99
PF00043	GST_C	0.99
PF02311	AraC_binding	0.99
PF00266	Aminotran_5	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.97
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.99
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	72.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.97 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	71.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.97 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	71.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	71.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	71.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Unclassified	root	N/A	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10335842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	986	Open in IMG/M
3300005167\|Ga0066672_10888783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300005172\|Ga0066683_10824079	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005175\|Ga0066673_10151505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1291	Open in IMG/M
3300005175\|Ga0066673_10215831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1100	Open in IMG/M
3300005181\|Ga0066678_10180792	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300005181\|Ga0066678_10205820	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300005295\|Ga0065707_10579691	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005450\|Ga0066682_10022738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3574	Open in IMG/M
3300005450\|Ga0066682_10204391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1266	Open in IMG/M
3300005518\|Ga0070699_101999978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300005540\|Ga0066697_10081419	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300005546\|Ga0070696_100740950	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005552\|Ga0066701_10212343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1189	Open in IMG/M
3300005558\|Ga0066698_10693582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300005559\|Ga0066700_11149738	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005561\|Ga0066699_10813435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300005569\|Ga0066705_10208662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1225	Open in IMG/M
3300005586\|Ga0066691_10640937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300005586\|Ga0066691_10888057	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005587\|Ga0066654_10237608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	958	Open in IMG/M
3300006034\|Ga0066656_10808351	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300006173\|Ga0070716_100688827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	779	Open in IMG/M
3300006791\|Ga0066653_10661207	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300006796\|Ga0066665_10923382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300006797\|Ga0066659_10707943	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	824	Open in IMG/M
3300006797\|Ga0066659_10768633	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300006797\|Ga0066659_11020252	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300006800\|Ga0066660_11618181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300006854\|Ga0075425_100138953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2780	Open in IMG/M
3300006854\|Ga0075425_100757715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1113	Open in IMG/M
3300006904\|Ga0075424_102618991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300007258\|Ga0099793_10119638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300009012\|Ga0066710_101075391	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300009137\|Ga0066709_101662061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	909	Open in IMG/M
3300009137\|Ga0066709_101722230	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300009137\|Ga0066709_102245707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300009148\|Ga0105243_11671614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300009162\|Ga0075423_12580530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300010320\|Ga0134109_10357488	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300010325\|Ga0134064_10092193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	987	Open in IMG/M
3300010325\|Ga0134064_10210407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300010326\|Ga0134065_10486253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300010335\|Ga0134063_10305338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	766	Open in IMG/M
3300010336\|Ga0134071_10725999	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300012205\|Ga0137362_11701681	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012206\|Ga0137380_10958625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M
3300012207\|Ga0137381_10380904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1230	Open in IMG/M
3300012210\|Ga0137378_11606591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300012211\|Ga0137377_10675092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	968	Open in IMG/M
3300012211\|Ga0137377_10697523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	950	Open in IMG/M
3300012211\|Ga0137377_11192505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300012582\|Ga0137358_10228976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1266	Open in IMG/M
3300012922\|Ga0137394_10975910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300012923\|Ga0137359_10041780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3972	Open in IMG/M
3300012923\|Ga0137359_11708109	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300012929\|Ga0137404_10648516	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300012929\|Ga0137404_11959468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300012930\|Ga0137407_10251793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1601	Open in IMG/M
3300012930\|Ga0137407_10871307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300012930\|Ga0137407_12169986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300012976\|Ga0134076_10070064	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300012976\|Ga0134076_10530368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300012977\|Ga0134087_10055678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1569	Open in IMG/M
3300014150\|Ga0134081_10278700	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300014326\|Ga0157380_11342506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	764	Open in IMG/M
3300015356\|Ga0134073_10222074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300015358\|Ga0134089_10105561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1083	Open in IMG/M
3300017654\|Ga0134069_1023857	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1848	Open in IMG/M
3300017657\|Ga0134074_1187701	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300017659\|Ga0134083_10245748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	748	Open in IMG/M
3300017659\|Ga0134083_10590557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300018431\|Ga0066655_10016142	All Organisms → cellular organisms → Bacteria	3376	Open in IMG/M
3300018431\|Ga0066655_10528437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	785	Open in IMG/M
3300018431\|Ga0066655_10569033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	760	Open in IMG/M
3300018433\|Ga0066667_10080337	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300018468\|Ga0066662_12083727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300018482\|Ga0066669_10277963	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1343	Open in IMG/M
3300026297\|Ga0209237_1149874	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300026305\|Ga0209688_1039292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	899	Open in IMG/M
3300026313\|Ga0209761_1185510	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	937	Open in IMG/M
3300026315\|Ga0209686_1168728	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300026316\|Ga0209155_1035521	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300026323\|Ga0209472_1312976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300026324\|Ga0209470_1019243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3738	Open in IMG/M
3300026324\|Ga0209470_1020975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3525	Open in IMG/M
3300026329\|Ga0209375_1253990	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300026331\|Ga0209267_1078636	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1430	Open in IMG/M
3300026332\|Ga0209803_1135653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	968	Open in IMG/M
3300026332\|Ga0209803_1347030	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300026333\|Ga0209158_1253614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300026528\|Ga0209378_1078016	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1505	Open in IMG/M
3300026532\|Ga0209160_1132360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1198	Open in IMG/M
3300026537\|Ga0209157_1280920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300026538\|Ga0209056_10342268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	990	Open in IMG/M
3300026547\|Ga0209156_10428735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300026548\|Ga0209161_10545630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300026557\|Ga0179587_11097487	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300027748\|Ga0209689_1024629	All Organisms → cellular organisms → Bacteria	3662	Open in IMG/M
3300033412\|Ga0310810_11345953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.06%
Host-Associated	Host-Associated	5.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.06%
Plants	Host-Associated → Plants	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.13%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.94%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	51.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	39.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_103358422	3300005167	Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMAAATGS
Ga0066672_108887832	3300005167	Soil	MKHGRWVAALLGVLLWGAASVADITNTTPYDYDSPPKPGKERGTYMAAATGSFGPDCFFTAIG
Ga0066683_108240791	3300005172	Soil	MRDGRCWAALLGVLLWGAAGHADITNTTPYDYDSPPTPGKERGTYMAAGTGS
Ga0066673_101515052	3300005175	Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFF
Ga0066673_102158312	3300005175	Soil	MKHGRWLAALLGVLLWGAAGRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFF
Ga0066678_101807921	3300005181	Soil	MKHGRWLAALLGVLLWGAAGRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGP
Ga0066678_102058202	3300005181	Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMAA
Ga0065707_105796911	3300005295	Switchgrass Rhizosphere	MRNGLSLAALLVLLWGATAHADITDTTPYDYDHPPKPGKEGGTYMAAA
Ga0066682_100227383	3300005450	Soil	MRHARCLAAFLGVLLWGATGHADITNTTPYDYDSPPRPGKE
Ga0066682_102043911	3300005450	Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFFT
Ga0070699_1019999781	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRHGRCLAAFLGVLLWGATGRADITNTTPYDYDYPPKPGKERGTYMAAATGS
Ga0066697_100814193	3300005540	Soil	MRHERCLAAFLGVLLWGATGRADITMTTPYDYDHPPKPGTERGTYMAA
Ga0070696_1007409501	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRHGRCLAALLGVLLGGAAGHADITNTTPYDYDHPPKPGKERGTYMAAATGSFGPDCFFT
Ga0066701_102123431	3300005552	Soil	MRDGRWLAALLGVLLWGAAGYADITNTTPYDYDSPPRPGKE
Ga0066698_106935822	3300005558	Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKELGTYMAAATGSFGPDCFFTFIGT
Ga0066700_111497381	3300005559	Soil	MKHGRWVAALFGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFFT
Ga0066699_108134351	3300005561	Soil	MRHGRCLAAFLGLLLWGASGHADITNTTPYDYDSPPRPGKERGTYMAA
Ga0066705_102086622	3300005569	Soil	MKHGRWLAALLGVLLWGVASRADITNTTPYDYDQPPAPGK
Ga0066691_106409372	3300005586	Soil	MRHGRCLAAFLGLLLWGASGHADITNTTPYDYDSPP
Ga0066691_108880571	3300005586	Soil	MRHGRCLAAFLGVLLWGAAGHADITNTTPYDYDSPPRPGKEQGTYMAAA
Ga0066654_102376082	3300005587	Soil	MRHGRCLAAFLGVLLWGAAGHADITNTTPYDYDSPPTPGKERGTYMAAGT
Ga0066656_108083511	3300006034	Soil	MKHGRSLAALFGVLLWGTASRGDITNTTPYDYDQPPAPGKEQGTYMAAATG
Ga0070716_1006888272	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGRCAAALLGVLLYAATGHADITSTTPYDYDHPPAPGVERGTYMAAATGSFGPDC
Ga0066653_106612072	3300006791	Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMAAATGSLGPDC
Ga0066665_109233822	3300006796	Soil	MRHGRCLAALLGVLLWGATGRADITMTTPYDYDHPPKPG
Ga0066659_107079431	3300006797	Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKE
Ga0066659_107686332	3300006797	Soil	MRHGGCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTY
Ga0066659_110202521	3300006797	Soil	MRHGRCLAAFLGLLLWGASGHADITNTTPYDYDSPPRPGKERGTYMAAGTGSLGPDCFFT
Ga0066660_116181811	3300006800	Soil	MKHGRWLAALLGVLLWGAAGHADITNTTPYDYDSPPTPGKERGTYMAAGTGS
Ga0075425_1001389532	3300006854	Populus Rhizosphere	MRHGRCCAALFGVLLCGGAAHADITNTTPYDYDHPPRPGKERGTYMAAATGALGPDCF
Ga0075425_1007577152	3300006854	Populus Rhizosphere	MRDGRCLAALLGVLLWGAASHADVTMTTPYEYDSPPRPGKEQGTYMAAVTGSLGPDCFFT
Ga0075424_1026189911	3300006904	Populus Rhizosphere	MRHGHFLVTLLGVLAWGAAGHADVTMTTPYDYQHPPKPGKERGTYMAAATGSLG
Ga0099793_101196381	3300007258	Vadose Zone Soil	MRHGRCLAALLGVLLWAASGHADITNTTPYDYDSPPKPGKERGTYMAA
Ga0066710_1010753913	3300009012	Grasslands Soil	MTDKRWLAALLGVLLWGATGHADITNTTPYDYDHPPRPGKEGGTYMAAATGSFGPDCFFTFIG
Ga0066709_1016620613	3300009137	Grasslands Soil	LAAFLGVLLWGATGRADITMTTPYDYDHPPKPGTERGTYMAAA
Ga0066709_1017222302	3300009137	Grasslands Soil	LAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMAAATGSLGPDCFF
Ga0066709_1022457071	3300009137	Grasslands Soil	MKHGRWLAALLGVLLWGAAGHADITNTTPYDYDSPPTPGKERGTYMAAGT
Ga0105243_116716142	3300009148	Miscanthus Rhizosphere	LGALLGVLLGGAAGHADITNTTPYDYDHPPRPGKERGTYMAAASGSLGPDCFFTFIGTA
Ga0075423_125805302	3300009162	Populus Rhizosphere	MRNERCLAAVLGVLLSGGVALADITSTTPYDYDHPPRPGKERG
Ga0134109_103574881	3300010320	Grasslands Soil	MKHGRWVAALFGVLLWAAAGHADVTNTTPYDYDSPPKPGKERGTYMAAGT
Ga0134064_100921932	3300010325	Grasslands Soil	MRHGRCLAAFLGVLLWGAAGQADITNTTPYDYDSPPRP
Ga0134064_102104071	3300010325	Grasslands Soil	MRHARCLAAFLGVLLWGATGHADITNTTPYDYDSPPRPGK
Ga0134065_104862532	3300010326	Grasslands Soil	MKHGRWLAALLGVLLWGAAGRADITNTTPYDYDQPPAPGKE
Ga0134063_103053382	3300010335	Grasslands Soil	MRHGRCLAAFLGLLLWGASGHADITNTTPYDYDSPPRPGKE
Ga0134071_107259991	3300010336	Grasslands Soil	LAAFLGVLLWGATGRADITNTTPYDYDYPPKPGKER
Ga0137362_117016812	3300012205	Vadose Zone Soil	MRHGRCLAAFLCVLLWGAAGHADITNTTPYDYDSPPRPGKEQGTY
Ga0137380_109586252	3300012206	Vadose Zone Soil	LAALLGVLLWSAAGHADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFFTFI
Ga0137381_103809041	3300012207	Vadose Zone Soil	LAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMAAATGSL
Ga0137378_116065911	3300012210	Vadose Zone Soil	MRHGRCLAALLGVLLWGATGRADITMTTPYDYDHPPKPGTERGTY
Ga0137377_106750922	3300012211	Vadose Zone Soil	MKHGRWLAALLGVLLWGVASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFG
Ga0137377_106975232	3300012211	Vadose Zone Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGK
Ga0137377_111925052	3300012211	Vadose Zone Soil	VAAVLGVLLWGTASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFFTAI
Ga0137358_102289761	3300012582	Vadose Zone Soil	MRDGRCFAALLGVLLYGATGHADITMTTPYDYDHPPKPGTERGTYMAAA
Ga0137394_109759101	3300012922	Vadose Zone Soil	MKNGRCWAALLGVLLWGAAGHADITNTTPYDYDHPPK
Ga0137359_100417805	3300012923	Vadose Zone Soil	MKHGRSLAALFGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAA
Ga0137359_117081092	3300012923	Vadose Zone Soil	MRHGRCLAALLGVLLWAASGHADITNTTPYDYDSPPKPGKERGTYMAAATGSF
Ga0137404_106485162	3300012929	Vadose Zone Soil	MKHGRWLPALLGVLLGGVASRADITNTTPYDYDQPPAPGKE
Ga0137404_119594681	3300012929	Vadose Zone Soil	MRDGRCFAALLGVLLYGATGHADITMTTPYDYDSPPAPGKERGTY
Ga0137407_102517931	3300012930	Vadose Zone Soil	LAAFLGVVLWGATGHADITNTTPYDYDSPPRPGKEGGTYMAAATGS
Ga0137407_108713071	3300012930	Vadose Zone Soil	LAAFLGLLLWGASGHADITNTTPYDYDSPPRPGKEGGTYMAA
Ga0137407_121699862	3300012930	Vadose Zone Soil	LAALLGVLLWGATGRADITMTTPYDYDHPPKPGTERGTYMAAA
Ga0134076_100700641	3300012976	Grasslands Soil	MRDRRWLAALLGVLLWGAAGLADITNTTPYDYDSPPTPGKERGTYMAAGTGSFGPDCF
Ga0134076_105303681	3300012976	Grasslands Soil	MRHGRCLAAFLGLLLWGASGHADITNTTPYDYDSPPRPGKERGTYMA
Ga0134087_100556781	3300012977	Grasslands Soil	LAAFLGVLLWGATGRADITMTTPYDYDHPPKPGTERGTYM
Ga0134081_102787002	3300014150	Grasslands Soil	LAAFLGVLLWGAAGHADITNTTPYDYDSPPKPGKERGTYMAAATGSLG
Ga0157380_113425062	3300014326	Switchgrass Rhizosphere	MRQARCLGALLGVLLGGAAGHADITNTTPYDYDHPPR
Ga0134073_102220742	3300015356	Grasslands Soil	LAAFLGVLLWGAAGNADITNTTPYDYDQPPAPGKEQ
Ga0134089_101055611	3300015358	Grasslands Soil	MKHGRWVAVLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFF
Ga0134069_10238571	3300017654	Grasslands Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMA
Ga0134074_11877012	3300017657	Grasslands Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKE
Ga0134083_102457483	3300017659	Grasslands Soil	MRHGRCLAALLGVLLWGATGRADITMTTPYDYDHPPKPGTERG
Ga0134083_105905572	3300017659	Grasslands Soil	MRHGRCLAAFLGVLLWGATGHADITNTTPYDYDSPPRPGKERGTYMAAATGSF
Ga0066655_100161426	3300018431	Grasslands Soil	MRHERCLAAFLGVLLWGATGRADITMTTPYDYDHPPKPGTERGTYMAAA
Ga0066655_105284371	3300018431	Grasslands Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFG
Ga0066655_105690332	3300018431	Grasslands Soil	MKHGRWVAALFGVLVWGAASRADITNTTPYDYDQPPAPEKEQGTYMAAATGSFGPDCFF
Ga0066667_100803375	3300018433	Grasslands Soil	MRHERCLAAFLGVLLWGATGRADITMTTPYDYDHP
Ga0066662_120837271	3300018468	Grasslands Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGS
Ga0066669_102779631	3300018482	Grasslands Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSL
Ga0209237_11498741	3300026297	Grasslands Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMAAATGSLGPDCFFT
Ga0209688_10392921	3300026305	Soil	MRHERCLAAFLGVLLWGATGRADITMTTPYDYDHPPKP
Ga0209761_11855101	3300026313	Grasslands Soil	MRHERCLAAFLGVLLWGATGRADITMTTPYDYDHPPKPGTERGTYMAAAT
Ga0209686_11687281	3300026315	Soil	MRHGRCLAAFLGVLLWGAAGHADITNTTPYDYDSPP
Ga0209155_10355211	3300026316	Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMAAATGSL
Ga0209472_13129762	3300026323	Soil	MRHGRCLAALLGVLLWSAAGHADITNTTPYDYDSPPKPGKERGTYMA
Ga0209470_10192434	3300026324	Soil	MRHERCLAAFLGVLLWGATGRADITMTTPYDYDHPPKPGTERGTYMAAATGSFGPDC
Ga0209470_10209757	3300026324	Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPA
Ga0209802_10431433	3300026328	Soil	MTHGRWVAVLGVLLWGAASRADITNTTPYDYDQPPAPGREQGTYMAAATGSFGPDCFFTAIGTAKYL
Ga0209375_12539901	3300026329	Soil	MRHGRCLAAFLGVVLWGATGQADITNTTPYDYDSPPRPGKEQGTYMAAATG
Ga0209267_10786362	3300026331	Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFFTAI
Ga0209803_11356532	3300026332	Soil	MRHGRCLAAFLGVLLWGATGRADITNTTPYDYDYPPKPGRERGTYMAAATGS
Ga0209803_13470301	3300026332	Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFFTAIGTAK
Ga0209158_12536141	3300026333	Soil	MRHARCLAAFLGVLLWGATGHADITNTTPYDYDSPPRPGKERGTYMAAA
Ga0209378_10780162	3300026528	Soil	MKHGRWLAALLGVLLWGVASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDC
Ga0209160_11323602	3300026532	Soil	MKHGRWVAALFGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSF
Ga0209157_12809202	3300026537	Soil	MRHGRCLAALLGVLLWAAAGHADITNTTPYDYDQPPAP
Ga0209056_103422681	3300026538	Soil	MRHGRCLAAFLGVLLWGATGRADITNTTPYDYDYDYDYPPKPGKERGTYMAAATGSLGPD
Ga0209156_104287351	3300026547	Soil	MKHGRWLAALLGVLLWGAASRADITNTTPYDYDQPPAPGKEQGTYM
Ga0209161_105456301	3300026548	Soil	MKHGRWLAALLGVLLWGAAGRADITNTTPYDYDQPPAPGKEQGTYMAAATGSFGPDCFFTFI
Ga0179587_110974871	3300026557	Vadose Zone Soil	MRHGRCLAAFLGVLLWGAAGHADITNTTPYDYDSPPRPGKEQ
Ga0209689_10246291	3300027748	Soil	MKHGRWLAALLGVLLWGVASRADITNTTPYDYDQPPAPGKEQGTYMAAATGSF
Ga0310810_113459531	3300033412	Soil	MRHGWMATLLGVLLSGAGAHADITMTTPYDYQHPPKPGKERG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103770

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences