NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F103765

Metagenome Family F103765

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103765
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 101 residues
Representative Sequence MVREQFGSATLIRLRGAFDLPQALELRGALHQLGKDVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ
Number of Associated Samples 73
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 34.65 %
% of genes near scaffold ends (potentially truncated) 37.62 %
% of genes from short scaffolds (< 2000 bps) 73.27 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(33.663 % of family members)
Environment Ontology (ENVO) Unclassified
(48.515 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.436 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.41%    β-sheet: 29.13%    Coil/Unstructured: 46.46%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.81
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.13.2.1: Anti-sigma factor antagonist SpoIIaad1th8b_1th80.69187
c.13.2.0: automated matchesd6m37b_6m370.69138
c.13.2.1: Anti-sigma factor antagonist SpoIIaad1vc1a_1vc10.68995
c.13.2.1: Anti-sigma factor antagonist SpoIIaad1h4xa_1h4x0.67106
c.1.8.0: automated matchesd2ckra_2ckr0.66028


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF04120Iron_permease 34.65
PF00072Response_reg 28.71
PF00741Gas_vesicle 9.90
PF03167UDG 6.93
PF00291PALP 4.95
PF01904DUF72 0.99
PF13188PAS_8 0.99
PF00437T2SSE 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 6.93
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 6.93
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 6.93
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001305|C688J14111_10079068All Organisms → cellular organisms → Bacteria → Proteobacteria999Open in IMG/M
3300005167|Ga0066672_10257003All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1126Open in IMG/M
3300005171|Ga0066677_10022518All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2930Open in IMG/M
3300005171|Ga0066677_10108239All Organisms → cellular organisms → Bacteria → Proteobacteria1480Open in IMG/M
3300005171|Ga0066677_10559001All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium654Open in IMG/M
3300005174|Ga0066680_10073851All Organisms → cellular organisms → Bacteria → Proteobacteria2046Open in IMG/M
3300005175|Ga0066673_10544679All Organisms → cellular organisms → Bacteria → Proteobacteria680Open in IMG/M
3300005177|Ga0066690_10036746All Organisms → cellular organisms → Bacteria2900Open in IMG/M
3300005178|Ga0066688_10368882All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300005178|Ga0066688_10425826All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium860Open in IMG/M
3300005179|Ga0066684_10025281All Organisms → cellular organisms → Bacteria → Proteobacteria3156Open in IMG/M
3300005186|Ga0066676_10686093All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium697Open in IMG/M
3300005187|Ga0066675_10511465All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300005540|Ga0066697_10050415All Organisms → cellular organisms → Bacteria2358Open in IMG/M
3300005555|Ga0066692_10597808All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium693Open in IMG/M
3300005557|Ga0066704_10470186All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium830Open in IMG/M
3300005557|Ga0066704_11035468All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium506Open in IMG/M
3300005561|Ga0066699_10450522All Organisms → cellular organisms → Bacteria → Proteobacteria921Open in IMG/M
3300005561|Ga0066699_11037375All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium567Open in IMG/M
3300005568|Ga0066703_10829997All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium528Open in IMG/M
3300005575|Ga0066702_10716821All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium596Open in IMG/M
3300005576|Ga0066708_10699291All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium642Open in IMG/M
3300005576|Ga0066708_10748796All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium616Open in IMG/M
3300005587|Ga0066654_10227986All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300005598|Ga0066706_10227405All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300006032|Ga0066696_10263378All Organisms → cellular organisms → Bacteria → Proteobacteria1115Open in IMG/M
3300006032|Ga0066696_10268294All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300006032|Ga0066696_10451910All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300006032|Ga0066696_11085772All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium509Open in IMG/M
3300006173|Ga0070716_100746194All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium753Open in IMG/M
3300006173|Ga0070716_101432699All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium563Open in IMG/M
3300006755|Ga0079222_10440157All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium927Open in IMG/M
3300006796|Ga0066665_10824472All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium728Open in IMG/M
3300006797|Ga0066659_11177923All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium640Open in IMG/M
3300006845|Ga0075421_100230887All Organisms → cellular organisms → Bacteria → Proteobacteria2276Open in IMG/M
3300006852|Ga0075433_10046718All Organisms → cellular organisms → Bacteria → Proteobacteria3766Open in IMG/M
3300006854|Ga0075425_100272335All Organisms → cellular organisms → Bacteria1949Open in IMG/M
3300006854|Ga0075425_100480257All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1431Open in IMG/M
3300006880|Ga0075429_100653147All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300006903|Ga0075426_10772454All Organisms → cellular organisms → Bacteria → Proteobacteria722Open in IMG/M
3300007076|Ga0075435_100133109All Organisms → cellular organisms → Bacteria2081Open in IMG/M
3300007076|Ga0075435_100727492All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium863Open in IMG/M
3300007076|Ga0075435_101046115All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300007255|Ga0099791_10687661All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium503Open in IMG/M
3300007258|Ga0099793_10041362All Organisms → cellular organisms → Bacteria → Proteobacteria2001Open in IMG/M
3300007258|Ga0099793_10188089All Organisms → cellular organisms → Bacteria → Proteobacteria988Open in IMG/M
3300007265|Ga0099794_10038720All Organisms → cellular organisms → Bacteria → Proteobacteria2260Open in IMG/M
3300009012|Ga0066710_100132310All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales3427Open in IMG/M
3300009038|Ga0099829_10095611All Organisms → cellular organisms → Bacteria → Proteobacteria2302Open in IMG/M
3300009088|Ga0099830_10815786All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium770Open in IMG/M
3300009089|Ga0099828_10454335All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300009137|Ga0066709_100085597All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales3786Open in IMG/M
3300009137|Ga0066709_100229376All Organisms → cellular organisms → Bacteria2467Open in IMG/M
3300009143|Ga0099792_10012620All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales3601Open in IMG/M
3300009143|Ga0099792_11052050All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium546Open in IMG/M
3300009143|Ga0099792_11235977All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium508Open in IMG/M
3300009147|Ga0114129_10000911All Organisms → cellular organisms → Bacteria → Proteobacteria38501Open in IMG/M
3300010360|Ga0126372_11460248All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium718Open in IMG/M
3300012096|Ga0137389_10008036All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae6902Open in IMG/M
3300012212|Ga0150985_114728850All Organisms → cellular organisms → Bacteria1553Open in IMG/M
3300012212|Ga0150985_121919066All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium907Open in IMG/M
3300012362|Ga0137361_11589359All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium575Open in IMG/M
3300012469|Ga0150984_101608876All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium771Open in IMG/M
3300012469|Ga0150984_107453352All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium605Open in IMG/M
3300012683|Ga0137398_10252351All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300012925|Ga0137419_10758991All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium791Open in IMG/M
3300012927|Ga0137416_10079752All Organisms → cellular organisms → Bacteria2403Open in IMG/M
3300012927|Ga0137416_10128119All Organisms → cellular organisms → Bacteria → Proteobacteria1954Open in IMG/M
3300012930|Ga0137407_10032295All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales4096Open in IMG/M
3300012948|Ga0126375_10002723All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae6199Open in IMG/M
3300012975|Ga0134110_10443416All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium582Open in IMG/M
3300012977|Ga0134087_10159287All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales988Open in IMG/M
3300014166|Ga0134079_10538868All Organisms → cellular organisms → Bacteria → Proteobacteria570Open in IMG/M
3300015356|Ga0134073_10164103All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium712Open in IMG/M
3300018433|Ga0066667_10760012All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium819Open in IMG/M
3300018433|Ga0066667_10900623All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium761Open in IMG/M
3300018468|Ga0066662_10027810All Organisms → cellular organisms → Bacteria3304Open in IMG/M
3300018468|Ga0066662_10035562All Organisms → cellular organisms → Bacteria3017Open in IMG/M
3300018468|Ga0066662_10195144All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1593Open in IMG/M
3300026301|Ga0209238_1047676All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300026305|Ga0209688_1001246All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales4003Open in IMG/M
3300026309|Ga0209055_1082219All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300026315|Ga0209686_1076191All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter1190Open in IMG/M
3300026320|Ga0209131_1099313All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1537Open in IMG/M
3300026326|Ga0209801_1067238All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300026335|Ga0209804_1078669All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300026335|Ga0209804_1197833All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium843Open in IMG/M
3300026529|Ga0209806_1293756All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium546Open in IMG/M
3300026542|Ga0209805_1435811All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium509Open in IMG/M
3300026550|Ga0209474_10096215All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2002Open in IMG/M
3300027643|Ga0209076_1075918All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium956Open in IMG/M
3300027671|Ga0209588_1017967All Organisms → cellular organisms → Bacteria → Proteobacteria2198Open in IMG/M
3300027903|Ga0209488_10022227All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales4606Open in IMG/M
3300027903|Ga0209488_10082890All Organisms → cellular organisms → Bacteria2387Open in IMG/M
3300027903|Ga0209488_10261461All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300027903|Ga0209488_10725134All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium710Open in IMG/M
3300027909|Ga0209382_11260964All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium752Open in IMG/M
3300031820|Ga0307473_10643614All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium737Open in IMG/M
3300032180|Ga0307471_100611122All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300032205|Ga0307472_100447817All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300032205|Ga0307472_101113922All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium748Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil33.66%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil5.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.98%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.98%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.98%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.98%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J14111_1007906823300001305SoilMALQMVQERIGPLMLLRLSGSFDLPQALELRRILSGLGEVILDFSQVDDLRVHALGIVAQSANGTLHLLGLRQYHVDVLGYLGFDIDEAGRLHRREEGVAAV*
Ga0066672_1025700333300005167SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ*
Ga0066677_1002251843300005171SoilMALNMVQERIGPLTLLRLKGSFDLPQALELRGVLGSLGEVILDFSQVEDLRVHALGIVAQSVNGTLHLLGLRQYHVDVLGYLGFEIDANGRLHRRDEEVTAV*
Ga0066677_1010823933300005171SoilQVARMRRLQMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ*
Ga0066677_1055900113300005171SoilALQMVQERIGPLTLLRLSGSFDLPQALELRRALADLGEVILDFSQVDDLRVHALGIVAQSATGTLHLLGLRQYHVDVLGYLGFDVDDSGRLHRRDEGAAAV*
Ga0066680_1007385133300005174SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLGNDVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ*
Ga0066673_1054467913300005175SoilMPPVDMVREQLGNATLIRLRGSFDLPQALELRGALAQLGDDVILDFSQVDDLRVHALGIVAQSAPPGVHLLGLRQHHADVLSYLGFDVDDRGRLLRRGAGAGAH*
Ga0066690_1003674623300005177SoilMVREQFGNATLIRLRGSFDLPQAVELRGTLAELEQAVILDFGQVDDLRVHALGVVAQSAQPGTHLLGLRQHHVDVLAYLGFDVDDRGCLLRREAGAGAH*
Ga0066688_1036888223300005178SoilMQRLQMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQHHVDVLGYLGFDLDDRGRLLRREASAGAQ*
Ga0066688_1042582613300005178SoilMVREQFGSATLVRLRGAFDLPQAVELRGALTGMGSEVILDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDG
Ga0066684_1002528113300005179SoilVSSLVVAGPRRQVPPMPPVDMVREQLGNATLIRLRGSFDLPQALELRGALAQLGDDVILDFSQVDDLRVHALGIVAQSAPPGVHLLGLRQHHADVLSYLGFDVDDRGRLLRRGAGAGAH*
Ga0066676_1068609313300005186SoilMVQERIGSLTLLRLSGSFDLPQALELRRVLAALHEVILDFSQVDDLRVHALGIVAQSARGTLHLLGLRQYHVDVLEYLGFELDQAGRLVRRDEGAAAV*
Ga0066675_1051146523300005187SoilMQRLQMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQYHVDVLGYLGFDLDDRGRLLRREASAGAQ*
Ga0066697_1005041523300005540SoilMVREQFGSAPLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ*
Ga0066692_1059780813300005555SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLSNDVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ*
Ga0066704_1047018613300005557SoilMVREQFGNAMLIRLRGSFDLPQAVELRGTLAELEQAVILDFGQVDDLRVHALGVVAQSAQPGTHLLGLRQHHVDVLAYLGFDVDDRGCLLRREAGAGAH*
Ga0066704_1103546813300005557SoilMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQHHVDVLGYLGF
Ga0066699_1045052223300005561SoilLSETMRVCIVSKMALNMVQERIGPLTLLRLRGSFDLPQALELRRVLASLSEVILDFSQVEDLRVHALGIVAQSAKRTLHLLGLRQYHVDVLGYLGFDVDVTGRLHRRDEEASVV*
Ga0066699_1103737523300005561SoilMVREQLGNATLIRLRGSFDLPQAVELRGALAEMEEPVIVDFGQVEDLRVHALGVVAQSAQPGVHLLGLRQHHVDVLSYLGFDVDDRGRLLRREADAEAH*
Ga0066703_1082999723300005568SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRR
Ga0066702_1071682113300005575SoilMARRQLARMPRLQMVQEQFGSATLIRLRGAFDLPQALELRGALPQLGSEVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ*
Ga0066708_1069929113300005576SoilGGDRRLVSPPIRRQLPSMQRLQMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQHYVDVLGYLGFDLDDRGRLLRREASAGAQ*
Ga0066708_1074879623300005576SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLGKDVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ*
Ga0066654_1022798633300005587SoilRIRLHVLNMALQMVQERIGPLMLLRLSGSFDLPQALELRRVLSALGEVIIDFSQVDDLRVHALGIVAQSANGTLHLLGLRQYHVDVLGYLGFDIDEAGRLHRRVEGVVAV*
Ga0066706_1022740533300005598SoilMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQYHVDVLGYLGFDLDDRGRLLRREASAGAQ*
Ga0066696_1026337813300006032SoilMRVCIVSKMALNMVQERIGPLTLLRLRGSFDLPQALELRRVLGSLSEVILDFSQVEDLRVHALGIVAQSAKRTLHLLGLRQYHVDVLGYLGFDVDVTGKLHRRDEEAPVV*
Ga0066696_1026829413300006032SoilMPPVDMVREQLGNATLIRLRGSFDLPQALELRGALAQLGDDVILDFSQVDDLRVHALGIVAQSAPPGVHLLGLRQHHADVLSYLGFDVDDRGRLL
Ga0066696_1045191013300006032SoilMVQERIGPLTLLRLSGSFDLPQALELRRALASLGEVILDFSQVDDLRVHALGIVAQSSNGTLHLLGLRQYHVDVLGYLGFDVDDSGRLHRRDEGAAAV*
Ga0066696_1108577223300006032SoilQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ*
Ga0070716_10074619413300006173Corn, Switchgrass And Miscanthus RhizosphereMLNMVQERIGPLTLLRLRGSFDLPQALELRRILGSLGEVILDFSQVEDLRVHALGIVAQSANGALHLLGLRQYHVDVLGYLGFEIDATGRLERRGEAATAV*
Ga0070716_10143269923300006173Corn, Switchgrass And Miscanthus RhizosphereGPLTLLRLRGSFDLPQALELRRILGSLGEVILDFSQVEDLRVHALGIVAQSATGTLHLLGLRQYHVDVLGYLGFEIDATGRLQRRGEEATAV*
Ga0079222_1044015723300006755Agricultural SoilMRRLQMVREEIGSATLIRLRGAFDLPQAVELRGALQTLRGEVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFVIDDGGRLLRRDADVGAV*
Ga0066665_1082447223300006796SoilMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVRALGIVAQSARPGVHLLGLRQYHVDVLGYLGFDLDDRGR
Ga0066659_1117792313300006797SoilYRRSTRAVVVSVASHRQFRRVPRLEMVREQFGNATLIRLRGSFDLPQAVELRGTLAQLEQAVILDFGQVDDLRVHALGVVAQSAQPGTHLLGLRQHHVDVLAYLGFDVDDRGCLLCREAGAEAH*
Ga0075421_10023088733300006845Populus RhizosphereMPRLQMVREQFGSATLIRLRGAFDLAQALELRGALHQIGNEVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRRETGAGAQ*
Ga0075433_1004671853300006852Populus RhizosphereMVREEFGSTTLIRLRGAFDLPHALELRGALQQLGNEVILDFSQVEDLRVHALGIVAQSAPPGVHLLGLRQHHVDVLGYLGFHVDDGGRLLRRESEAAAR*
Ga0075425_10027233533300006854Populus RhizosphereMVREQLGSTTLIRLRGAFDLPQALELRGALLQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQHHVDVLGYLGFELDDGGRLLRRAAGAGAQ*
Ga0075425_10048025723300006854Populus RhizosphereMVREEFGSTTLIRLRGAFDLPQAVELRGALQTLGGEVILDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRRDANVGAV*
Ga0075429_10065314723300006880Populus RhizosphereMVREEFGSTTLIRLRGAFDLPHALELRGALQQLGNEVILDFSQVEDLRVHALGIVAQSAPPGVHLLGLRQHHVDVLGYLGFHVDDGGRLLRRESEA
Ga0075426_1077245413300006903Populus RhizosphereSRMRRLQMVREEFGSTTLIRLRGAFDLPHALELRGALQQLGNEVILDFSQVEDLRVHALGIVAQSAPPGVHLLGLRQHHVDVLGYLGFHVDDGGRLLRRESEAAAR*
Ga0075435_10013310913300007076Populus RhizosphereMVREEFGSTTLIRLRGAFDLPHALELRGALQQLGNEVILDFSQVEDLRVHALGIVAQSAPPGVHLLGLRQHHVDVLGYLGFHVDDGG
Ga0075435_10072749213300007076Populus RhizosphereHNLRRMRRLQMVREEFGSTTLIRLRGAFDLPQAVELRGALQTLGGEVILDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRRDANVGAV*
Ga0075435_10104611513300007076Populus RhizosphereRGAFDLPQALELRGALRQMGNDVVLDFSQVDDLRVHALGVVAQSARPGLYLLGLRQHHVDVLGYLGFDLDDGGRLLRREASAGAG*
Ga0099791_1068766123300007255Vadose Zone SoilMPRLQMVREQFGNATLIRLRGAFDLPQALELRSALHQLGRDVILDFGQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDRGRLLRREAGA
Ga0099793_1004136243300007258Vadose Zone SoilMPRLQMVREQFGNATLIRLRGAFDLPQALELRSALHQLGRDVILDFGQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDRGRLLRREAGARAH*
Ga0099793_1018808923300007258Vadose Zone SoilMPRLQMVREQFGNATLIRLRGAFDLPQALELRGALPQLGNEVILDFSQVEDLRVHALGVVAQSAQPGMHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ*
Ga0099794_1003872033300007265Vadose Zone SoilMRRLQMVREQFGNATLIRLRGAFDLPQALELRGALHQLGNEVIIDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRRESGAGAQ*
Ga0066710_10013231023300009012Grasslands SoilMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQHHVDVLGYLGFDLDDRGRLLRREASAGAQ
Ga0099829_1009561133300009038Vadose Zone SoilMRRLQMVREQFGSATLIRLRGAFDLPQALELRGALHELGSEVIIDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAR*
Ga0099830_1081578623300009088Vadose Zone SoilMRRLQMVLEQFGSATLIRLRGAFDLPQALELRGALHELGSEVIIDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAR*
Ga0099828_1045433513300009089Vadose Zone SoilMRRLQMVREQVGSATLIRLRGAFDLPQALELRGALHELGNEVIVDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAR*
Ga0066709_10008559743300009137Grasslands SoilMVREQFGNATLIRLRGSFDLPQAVELRGTLAQLEQAVILDFGQVDDLRVHALGVVAQSAQPGTHLLGLRQHHVDVLAYLGFDVDDRGCLLRREAGAEAH*
Ga0066709_10022937633300009137Grasslands SoilMRRLQMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ*
Ga0099792_1001262043300009143Vadose Zone SoilMPRLQMVREQFGSATLIRLRGAFDLPQALELRGALHQLGNDVILDFSHVEDLRVHALGVVAQSAQPGMHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ*
Ga0099792_1105205023300009143Vadose Zone SoilLQMVQERIGPLTLLRLSGSFDLPQALELRKVLASLREVILDFSQVEDLRVHALGIVAQSANGPLHLLGLRQYHVDVLGYLGFEIDAAGKLQRREDEGVAAV*
Ga0099792_1123597713300009143Vadose Zone SoilTLIRLRGAFDLPQALELRGALPQLGNEVILDFSQVEDLRVHALGVVAQSAQPGMHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ*
Ga0114129_1000091153300009147Populus RhizosphereMRRLQMVREEFGSTTLIRLRGAFDLPHALELRGALQQLGNEVILDFSQVEDLRVHALGIVAQSAPPGVHLLGLRQHHVDVLGYLGFHVDDGGRLLRRESEAAAR*
Ga0126372_1146024823300010360Tropical Forest SoilMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQAARPGVHFLGLRQHHVDVLGYLGFDLDDGGRLLRRAAGAGAQ*
Ga0137389_1000803693300012096Vadose Zone SoilMRRLQMVREQVGSATLIRLRGAFDLPQALELRGALHELGSEVIIDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAR*
Ga0150985_11472885033300012212Avena Fatua RhizosphereMALQMVQERIGPLMLLRLSGSFDLPQALELRRILSGLGEVILDFSQVDDLRVHALGIVAQSANGTLHLLGLRQYHVDVLGYLGFDIDEAGRLHRREEGIAAV*
Ga0150985_12191906623300012212Avena Fatua RhizosphereMVSNMALNMVQERIGPLTLLRLRGSFDLPQALELRRVLGSLSEVILDFSQVEDLRVHALGIVAQSTNGTLHLLGLRQYHVDVLGYLGFDIDATGRLHRRGEEATAV*
Ga0137361_1158935913300012362Vadose Zone SoilDLPQAVELRGALTGMGSEVILDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ*
Ga0150984_10160887613300012469Avena Fatua RhizosphereMALNMVKERIGPMTLLRLRGSFDLPQALELRRILGTLGEVILDFSQVDDLRVHALGIVAQSGNGTLHLLGLRQYHVDVLGYLGFEIDATGKLHRRGEEAAAI*
Ga0150984_10745335223300012469Avena Fatua RhizosphereMVSNMALNIVQERIGPLTLLRLRGSFDLPQALELRRVLGSLSEVILDFSQVEDLRVHALGIVAQSTNGTLHLLGLRQYHVDVLGYLGFDIDATGRLHRRGEEATAV*
Ga0137398_1025235133300012683Vadose Zone SoilMALQMVQERIGPLTLLRLSGSFDLPQALELRRVLASVGEVILDFSQVEDLRVHALGIVAQSANGPLHMLVLRQYHVDVLGYLGF
Ga0137419_1075899113300012925Vadose Zone SoilMRRLQMVREQLGNATLIRLRGPFDLPQALELRGALDQLDNDVIIDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRRESGAGAQ*
Ga0137416_1007975243300012927Vadose Zone SoilMVREQFGNATLIRLRGAFDLPQALELRGALPQLGNEVILDFSQVEDLRVHALGVVAQSAQPGMHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ*
Ga0137416_1012811933300012927Vadose Zone SoilLIRLRGPFDLPQALELRGALDQLDNDVIIDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRRESGAGAQ*
Ga0137407_1003229563300012930Vadose Zone SoilMPGLQMVREQFGSATLIRLRGAFDLPQAVELRGALTGMGSEVILDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ*
Ga0126375_1000272393300012948Tropical Forest SoilFVSLAVRTQVPAMPRLQMVRERIGSATLIRLRGAFDLPQALELRGTLHELETDVLLDFSQVEDLRVHALGIVAQAAQPGMHLLGLRQHHVDVLGYLGFELDDGGRLLRREAGAGAQ*
Ga0134110_1044341613300012975Grasslands SoilMQRLQMVREQLGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQYHVDVLGYLGFDLDDRGRLL
Ga0134087_1015928733300012977Grasslands SoilALNMVQERIGPLTLLRLKGSFDLPQALELRRVLGSLGEVILDFSQVEDLRVHALGIVAQSVNGTLHLLGLRQYHVDVLGYLGFEIDANGRLHRRDEEVTAV*
Ga0134079_1053886823300014166Grasslands SoilGSTTLIRLRGAFDLPQALELRGALHQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQYHVDVLGYLGFDLDDRGRLLRREASAGAQ*
Ga0134073_1016410313300015356Grasslands SoilMALNMVQERIGPLTLLRLKGSFDLPQALELRGVLGSLGEVILDFSQVEDLRVHALGIVAQSVNGTLHLLGLRQYHVGGLGYHGFEVDANGRLHRRDEEV
Ga0066667_1076001223300018433Grasslands SoilMVQERIGPLTLLRLSGSFDLPQALELRRALASLGEVILDFSQVDDLRVHALGIVAQSSNGTLHLLGLRQYHVDVLGYLGFDVDDSGRLHRRDEGAAAV
Ga0066667_1090062313300018433Grasslands SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLGNDVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREA
Ga0066662_1002781013300018468Grasslands SoilMVQERIGSLTLLRLSGSFDLPQALELRRVLAALHEVILDFSQVDDLRVHALGIVAQSARGTLHLLGLRQYHVDVLEYLGFELDQA
Ga0066662_1003556243300018468Grasslands SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLGNDVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ
Ga0066662_1019514433300018468Grasslands SoilMALNMVQERIGPLTLLRLKGSFDLPQALELRGVLGSLGEVILDFSQVEDLRVHALGIVAQSVNGTLHLLGLRQYHIDVLGYLGFEIDATGRLQRRGDEATAV
Ga0209238_104767633300026301Grasslands SoilMALNMVKERIGPLTLLRLRGSFDLPQALELRRVLGSLGEVILDFSQVDDLRVHALGIVAQSGNGVLHLLGLRQYHVDVLGYLGFDIDATGKLHRRGEEVAVI
Ga0209688_100124643300026305SoilMALNMVQERIGPLTLLRLKGSFDLPQALELRGVLGSLGEVILDFSQVEDLRVHALGIVAQSVNGTLHLLGLRQYHVDVLGYLGFEIDANGRLHRRDEEVTAV
Ga0209055_108221923300026309SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ
Ga0209686_107619113300026315SoilQVARMRRLQMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGAQ
Ga0209131_109931333300026320Grasslands SoilTLIRLRGAFDLPQALELRSALHQLGRDVILDFGQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDRGRLLRREAGARAH
Ga0209801_106723843300026326SoilMRRLQMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVD
Ga0209804_107866923300026335SoilMVREQFGNATLIRLRGSFDLPQAVELRGTLAELEQAVILDFGQVDDLRVHALGVVAQSAQPGTHLLGLRQHHVDVLAYLGFDVDDRGCLLRREAGAGAH
Ga0209804_119783313300026335SoilMRRLQMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVG
Ga0209806_129375623300026529SoilMVREQFGSATLIRLRGAFDLPQALELRGALHQLDNDVILDFSQVDDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGVGA
Ga0209805_143581113300026542SoilLSETMRVCIVSKMALNMVQERIGPLTLLRLRGSFDLPQALELRRVLASLSEVILDFSQVEDLRVHALGIVAQSAKRTLHLLGLRQYHVDVLGYLGFDVDVTGRLHRRDEEASVV
Ga0209474_1009621523300026550SoilMRVCIVSKMALNMVQERIGPLTLLRLRGSFDLPQALELRRVLGSLSEVILDFSQVEDLRVHALGIVAQSAKRTLHLLGLRQYHVDVLGYLGFDVDVTGKLHRRDEEAPVV
Ga0209076_107591813300027643Vadose Zone SoilMVREQFGNATLIRLRGAFDLPQALELRSALHQLGRDVILDFGQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDRGRLLRREAGARAH
Ga0209588_101796733300027671Vadose Zone SoilMVREQFGNATLIRLRGAFDLPQALELRGALHQLGNEVIIDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRRESGAGAQ
Ga0209488_1002222753300027903Vadose Zone SoilMVREQFGSATLIRLRGAFDLPQALELRGALHELGSEVIIDFSQVEDLRVHALGIVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAR
Ga0209488_1008289013300027903Vadose Zone SoilMVREQFGNATLIRLRGAFDLPQALELRGALPQLGNEVILDFSQVEDLRVHALGVVAQSAQPGMHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ
Ga0209488_1026146123300027903Vadose Zone SoilMALQMVQERIGPLTLLRLSGSFDLPQALELRKVLASLREVILDFSQVEDLRVHALGIVAQSANGPLHLLGLRQYHVDVLGYLGFEIDAAGKLQRREDEGVAAV
Ga0209488_1072513413300027903Vadose Zone SoilMPRLQMVREQLGSATLIRLRGAFDLPQALELRGALHQIGNDVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRREAGAGAQ
Ga0209382_1126096413300027909Populus RhizosphereMPRLQMVREQFGSATLIRLRGAFDLAQALELRGALHQIGNEVILDFSQVEDLRVHALGVVAQSAQPGLHLLGLRQHHVDVLGYLGFDVDDGGRLLRRETGAGAQ
Ga0307473_1064361413300031820Hardwood Forest SoilRQLPPMRRLEMVREQIGSATLIRLRGAFDLPQALELRGALHQLGSDVVLDFSQVDDLRVHALGVVAQSARPGLYLLGLRQHHVDVLGYLGFDVDDGGRLLRREASAGAG
Ga0307471_10061112223300032180Hardwood Forest SoilMPRLQMVREQIGSATLIRLRGSFDLPQALELRGALRELETDVLLDFSQVEDLRVHALGIVAQAARPGVHLLGLRQHHVDVLGYLGFELDDGGRLVRREAGAGAR
Ga0307472_10044781723300032205Hardwood Forest SoilMVREQLGSTTLIRLRGAFDLPQALELRGALLQLDTDVLLDFSQVEDLRVHALGIVAQSARPGVHLLGLRQHHVDVLGYLGFELDDGGRLLRRAAGAGAQ
Ga0307472_10111392223300032205Hardwood Forest SoilRLRGSFDLPQALELRAALRELETDVLLDFSQVEDLRVHALGIVAQAARPGVHLLGLRQHHVDVLGYLGFELDDGGRLLRREAGAGAR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.