Metagenome Family F103761

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103761
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	62 residues
Representative Sequence	MQTHLTRTVRDNAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Number of Associated Samples	82
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.13 %
% of genes near scaffold ends (potentially truncated)	19.80 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.475 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.703 % of family members)
Environment Ontology (ENVO)	Unclassified (34.653 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.56% β-sheet: 22.03% Coil/Unstructured: 64.41%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13533	Biotin_lipoyl_2	33.66
PF13714	PEP_mutase	6.93
PF00529	CusB_dom_1	3.96
PF00873	ACR_tran	2.97
PF16576	HlyD_D23	2.97
PF03167	UDG	1.98
PF00440	TetR_N	1.98
PF13414	TPR_11	0.99
PF05368	NmrA	0.99
PF02371	Transposase_20	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.98
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.98
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	1.98
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
All Organisms	root	All Organisms	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
cellular organisms	root	All Organisms → cellular organisms	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.98 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.98 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.98 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.98 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	1.98 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.98 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.98 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	1.98 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	1.98 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.98 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Bradyrhizobium barranii subsp. apii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. apii	1.98 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	1.98 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.98 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_105784744	Not Available	552	Open in IMG/M
3300001867\|JGI12627J18819_10107631	Not Available	1150	Open in IMG/M
3300002245\|JGIcombinedJ26739_100721396	Not Available	876	Open in IMG/M
3300002914\|JGI25617J43924_10171845	Not Available	728	Open in IMG/M
3300005174\|Ga0066680_10743612	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005332\|Ga0066388_101151866	Not Available	1319	Open in IMG/M
3300005467\|Ga0070706_100152303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	2158	Open in IMG/M
3300005712\|Ga0070764_10380796	Not Available	830	Open in IMG/M
3300005764\|Ga0066903_101336839	Not Available	1341	Open in IMG/M
3300005921\|Ga0070766_10503683	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300006173\|Ga0070716_100870865	Not Available	703	Open in IMG/M
3300006175\|Ga0070712_101734138	Not Available	547	Open in IMG/M
3300006176\|Ga0070765_100397193	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300006176\|Ga0070765_100632218	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300006176\|Ga0070765_101175108	Not Available	725	Open in IMG/M
3300006893\|Ga0073928_10061824	All Organisms → cellular organisms → Bacteria	3304	Open in IMG/M
3300006893\|Ga0073928_10143508	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300007258\|Ga0099793_10493323	Not Available	608	Open in IMG/M
3300007258\|Ga0099793_10544078	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300009038\|Ga0099829_10006907	All Organisms → cellular organisms → Bacteria	7046	Open in IMG/M
3300009038\|Ga0099829_11196713	Not Available	629	Open in IMG/M
3300009088\|Ga0099830_10033466	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300009088\|Ga0099830_10086110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	2316	Open in IMG/M
3300009088\|Ga0099830_11206233	Not Available	628	Open in IMG/M
3300009089\|Ga0099828_10968142	Not Available	759	Open in IMG/M
3300009137\|Ga0066709_101175868	Not Available	1129	Open in IMG/M
3300010046\|Ga0126384_12295476	Not Available	521	Open in IMG/M
3300010048\|Ga0126373_10223201	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300010359\|Ga0126376_11560523	Not Available	691	Open in IMG/M
3300010360\|Ga0126372_10548036	Not Available	1098	Open in IMG/M
3300010360\|Ga0126372_11263516	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300011269\|Ga0137392_10175066	All Organisms → cellular organisms → Bacteria → Proteobacteria	1745	Open in IMG/M
3300011269\|Ga0137392_11148267	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300011270\|Ga0137391_10004319	All Organisms → cellular organisms → Bacteria → Proteobacteria	10869	Open in IMG/M
3300011270\|Ga0137391_10160048	Not Available	1962	Open in IMG/M
3300011270\|Ga0137391_11118200	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012096\|Ga0137389_11038904	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300012202\|Ga0137363_10516059	Not Available	1005	Open in IMG/M
3300012363\|Ga0137390_10126260	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300012685\|Ga0137397_11124313	Not Available	571	Open in IMG/M
3300012917\|Ga0137395_11048010	Not Available	581	Open in IMG/M
3300012927\|Ga0137416_10251424	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300012930\|Ga0137407_10524607	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300012971\|Ga0126369_12751236	Not Available	575	Open in IMG/M
3300016319\|Ga0182033_12179668	Not Available	506	Open in IMG/M
3300020579\|Ga0210407_10651398	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300020580\|Ga0210403_10971965	Not Available	666	Open in IMG/M
3300020581\|Ga0210399_10034239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	4062	Open in IMG/M
3300020583\|Ga0210401_10276628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1539	Open in IMG/M
3300020583\|Ga0210401_10393940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1247	Open in IMG/M
3300020583\|Ga0210401_11256743	Not Available	599	Open in IMG/M
3300021046\|Ga0215015_10780361	Not Available	630	Open in IMG/M
3300021088\|Ga0210404_10393761	Not Available	774	Open in IMG/M
3300021170\|Ga0210400_10463585	Not Available	1046	Open in IMG/M
3300021171\|Ga0210405_10926796	Not Available	661	Open in IMG/M
3300021420\|Ga0210394_10846190	Not Available	798	Open in IMG/M
3300021432\|Ga0210384_11401722	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021432\|Ga0210384_11801667	Not Available	518	Open in IMG/M
3300021433\|Ga0210391_11160658	Not Available	599	Open in IMG/M
3300021474\|Ga0210390_10176639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1804	Open in IMG/M
3300021560\|Ga0126371_12686176	Not Available	603	Open in IMG/M
3300022557\|Ga0212123_10078039	All Organisms → cellular organisms → Bacteria	2812	Open in IMG/M
3300024288\|Ga0179589_10291332	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300024330\|Ga0137417_1488907	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300025910\|Ga0207684_10356316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. apii	1259	Open in IMG/M
3300025910\|Ga0207684_11070664	Not Available	672	Open in IMG/M
3300026551\|Ga0209648_10157551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1784	Open in IMG/M
3300026551\|Ga0209648_10678538	Not Available	563	Open in IMG/M
3300026557\|Ga0179587_10745154	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300027109\|Ga0208603_1049931	Not Available	637	Open in IMG/M
3300027610\|Ga0209528_1042312	Not Available	1009	Open in IMG/M
3300027619\|Ga0209330_1069617	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300027645\|Ga0209117_1103739	Not Available	774	Open in IMG/M
3300027671\|Ga0209588_1244582	Not Available	549	Open in IMG/M
3300027674\|Ga0209118_1202238	Not Available	535	Open in IMG/M
3300027842\|Ga0209580_10409428	Not Available	676	Open in IMG/M
3300027846\|Ga0209180_10334552	Not Available	865	Open in IMG/M
3300027862\|Ga0209701_10125888	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300027875\|Ga0209283_10151204	All Organisms → cellular organisms → Bacteria → Proteobacteria	1539	Open in IMG/M
3300027879\|Ga0209169_10648811	Not Available	549	Open in IMG/M
3300027882\|Ga0209590_10108423	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300027889\|Ga0209380_10028102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3171	Open in IMG/M
3300027895\|Ga0209624_10569496	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300027895\|Ga0209624_10874966	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300027903\|Ga0209488_10832911	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300027908\|Ga0209006_10285373	All Organisms → cellular organisms → Bacteria → Proteobacteria	1412	Open in IMG/M
3300028536\|Ga0137415_10319998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. apii	1355	Open in IMG/M
3300028906\|Ga0308309_10465911	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300031231\|Ga0170824_123581382	Not Available	526	Open in IMG/M
3300031708\|Ga0310686_106012502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2261	Open in IMG/M
3300031708\|Ga0310686_106645427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1894	Open in IMG/M
3300031720\|Ga0307469_11667870	Not Available	614	Open in IMG/M
3300031753\|Ga0307477_10730314	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300031820\|Ga0307473_10360357	Not Available	939	Open in IMG/M
3300031820\|Ga0307473_10860103	Not Available	652	Open in IMG/M
3300031962\|Ga0307479_11615341	Not Available	603	Open in IMG/M
3300032174\|Ga0307470_10685762	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300032205\|Ga0307472_100948469	Not Available	801	Open in IMG/M
3300032770\|Ga0335085_11843035	Not Available	618	Open in IMG/M
3300032782\|Ga0335082_10832677	Not Available	785	Open in IMG/M
3300032893\|Ga0335069_10689489	Not Available	1162	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.03%
Aquatic	Environmental → Aquatic	2.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.31%
Loam	Environmental → Terrestrial → Soil → Loam	24.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.97%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1057847441	3300000955	Soil	MQTHLTRTVRDNAGRIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
JGI12627J18819_101076312	3300001867	Forest Soil	MQTHLTRTVRDNAGRIHNRGEHVTILGHWLELGTHRDLLRARWDSGDAVILLPEDVEED*
JGIcombinedJ26739_1007213962	3300002245	Forest Soil	VVRDNAGHTHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED*
JGI25617J43924_101718451	3300002914	Grasslands Soil	MQTHLTRIVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0066680_107436122	3300005174	Soil	MQTHLTRTVRDNTGHVHNRGEHVTVLGHRLELGTHRDLLRARWDSGVTVILLPEDVEED*
Ga0066388_1011518663	3300005332	Tropical Forest Soil	MQTHLTRTVRDNTGLIHHRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEESSHNHAHHELSARLIDD*
Ga0070706_1001523031	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQTHLTRTVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED*
Ga0070764_103807962	3300005712	Soil	MQTHLTRTVRDNAGHVHKRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0066903_1013368392	3300005764	Tropical Forest Soil	MQTHLSRIVRDNAGHVHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0070766_105036832	3300005921	Soil	MQTHLTRTVRDNAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGVTAILLPEDVEEDSHNGTHITTFGSPDR*
Ga0070716_1008708652	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MQTHLTRTVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0070712_1017341381	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQTHLTRTVRDNAGRIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0070765_1003971932	3300006176	Soil	MQTHLTRTVRDNAGHIHPRGEHVIILGHWLELGTHRDLLRARWDSGDTVILLPEDVEED*
Ga0070765_1006322181	3300006176	Soil	METHLTRIVRDNAGHIHNRGEHVTILGHWLELGTYAQGLVAGRWDSGDTAILLPEDVEENWP*
Ga0070765_1011751082	3300006176	Soil	MQTHLTRTVRDNAGHVHKRGEHVTILGHWLELGTHRDLLRARWDSGVTAILLPEDVEEDSHNGTHITTFGSPDR*
Ga0073928_100618243	3300006893	Iron-Sulfur Acid Spring	MQTQLTRTVRDNSGHIHSRGEHVTILGYWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0073928_101435082	3300006893	Iron-Sulfur Acid Spring	MQTHLTPLVRDKVGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0099793_104933231	3300007258	Vadose Zone Soil	MQTHLTRIVRDNAGYIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0099793_105440782	3300007258	Vadose Zone Soil	MQTHLTRIVRDNAGHVHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED*
Ga0099829_100069075	3300009038	Vadose Zone Soil	MQTHLTRTVRDNAGHIHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEEDWPSWHAHHDLSARLIDD*
Ga0099829_111967131	3300009038	Vadose Zone Soil	MQTHLTRTVRDNAGHVHKRGEHITILGHWLELGTHRDLLRARWDSGVTAILLPEDVEEDSHNGTHITTFGSLI
Ga0099830_100334661	3300009088	Vadose Zone Soil	MQTHLTRTVRDNAGHIHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEE
Ga0099830_100861103	3300009088	Vadose Zone Soil	MQTHLTRTVRDNAGHVHKRGEHITILGHWLELGTHRDLLRARWDSGDSVILLPEDVEED*
Ga0099830_112062331	3300009088	Vadose Zone Soil	MQTHLTRIVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRAQWDSEDAVILLPEDVEED*
Ga0099828_109681421	3300009089	Vadose Zone Soil	MQTHLTRIVRDNVGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDSVILLPEDVEED*
Ga0066709_1011758681	3300009137	Grasslands Soil	MQTHLTRTVRDNAGHVHKRGEHVTILGHWLELGTHRNLLRARWDSGVTAILLPEDVEEDSHNGTHITTFGSPDR*
Ga0126384_122954761	3300010046	Tropical Forest Soil	MQTHLSRIVRDNAGHVHPRGEHVTILGHWLELGTHRDLLRARWDSGDGAILLPEDVEED*
Ga0126373_102232013	3300010048	Tropical Forest Soil	MQTHLTRTVRDNAGLIHHRGEHVTILGHLLELGTHRDLLRARWDSGDTAILLPKDVEEDWPSWHAHHDLRLT*
Ga0126376_115605232	3300010359	Tropical Forest Soil	MQTRLTRTVRDNAGHVHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPKDVEEDWPSWHAHHDLRLT*
Ga0126372_105480361	3300010360	Tropical Forest Soil	MQTHLTRTVRDNAGHAHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPKDVEEDWPSWHAHHDLRLA*
Ga0126372_112635162	3300010360	Tropical Forest Soil	MQTHLTRTVRDIAGHIHNSGEHVTILGHWLELGTHRDLLRARWDSGDAAILLPEDVEED*
Ga0137392_101750662	3300011269	Vadose Zone Soil	MTRTVRDNAGHIHPRGEHVTVLGHWLELGTHRDLLRARWDSGDTAILLPEDVEEDWPSWHAHHDLSARLIDD*
Ga0137392_111482671	3300011269	Vadose Zone Soil	NRRGDLLMQTHLTRIVRDNAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0137391_100043197	3300011270	Vadose Zone Soil	MQTHLTRTVRDNAGHIHPRGEHVTILGHWLELGTHRDLLRARWDRGDTAILLPEDVEEDWPSWHAHHDLSARLIDD*
Ga0137391_101600482	3300011270	Vadose Zone Soil	MQTHLTRIVRDNVGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0137391_111182001	3300011270	Vadose Zone Soil	LLMQTHLTRIVRDNAGHVHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED*
Ga0137389_110389042	3300012096	Vadose Zone Soil	VRDNAGHVHKRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0137363_105160591	3300012202	Vadose Zone Soil	GNRRGDSLMQTHLTRTVRDNAGHVHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED*
Ga0137390_101262603	3300012363	Vadose Zone Soil	MQTHLTRTVRDNAGHIHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEEVEEDWPSWHAHHDLSARLIDD*
Ga0137397_111243132	3300012685	Vadose Zone Soil	MQTHLTRVVRDNVGHIHHRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED*
Ga0137395_110480101	3300012917	Vadose Zone Soil	MQTHLTRIVRDNAGHVHNRGEHVTVLGHWLELGMHRDLLRARWDSGDAVILLPEDVEED*
Ga0137416_102514241	3300012927	Vadose Zone Soil	MQTHLTRIVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRALWDSGDAAILLPEDVEED*
Ga0137407_105246072	3300012930	Vadose Zone Soil	MQTHLTRIVRGNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDSVILLPEDVEED*
Ga0126369_127512362	3300012971	Tropical Forest Soil	MQTHLTRTVRDIAGHIHNSGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPKDVEEDWPSWHAHHDLRLA*
Ga0182033_121796681	3300016319	Soil	MQTHLTRTVRDNAGHIHNRGEHVTILDHWLELGTHRDLLRARWDSGDAVILLPDDVEED
Ga0210407_106513982	3300020579	Soil	MQTHLTRIVRDNAGHIHNRGEHVTILGHWLELGTHRDLLRALWDSGDAAILLPEDVEED
Ga0210403_109719652	3300020580	Soil	MQTHLTRTVRDNAGRIHNRGEHVTILGHWLELGTHRDLLQARWDSGDTAILLPEDVEED
Ga0210399_100342392	3300020581	Soil	MQTHLTRIVRDNAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDKAILLPEDVEED
Ga0210401_102766281	3300020583	Soil	MQTHLTRIVRDNAGRIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0210401_103939402	3300020583	Soil	MQTHLTRTVRDNAGHVHNRGEHVTVLCHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0210401_112567431	3300020583	Soil	MQTHLTRTVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0215015_107803611	3300021046	Soil	THLTRTVRDNAGRIHNRGEHVTILGRWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0210404_103937612	3300021088	Soil	MQTHLTRTVRDNAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0210400_104635852	3300021170	Soil	MQTHLTRIVRDNVGHIHNRGEHVTILGHWLELGTHRDLLRALWDSGDAAILLPEDVEED
Ga0210405_109267961	3300021171	Soil	MQTHLTRIVRDNVGHIHNRGEHVIILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0210394_108461902	3300021420	Soil	MQTHLTRIVRDNVGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0210384_114017222	3300021432	Soil	MQTHLTRTVRDNAGHVHNRGEHVTVLCHWLELGTHRDLLRARWDTGDTAIL
Ga0210384_118016671	3300021432	Soil	HLTRTMRDNAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0210391_111606581	3300021433	Soil	MQTHLTRIVRDNAGHIHNRGEHVTVLSHWLELGTHRDLLRARWDSGDTAILLPEDVEEN
Ga0210390_101766392	3300021474	Soil	MQTHLTRIVRDNAGHIHNRSEHVTVLGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0126371_126861762	3300021560	Tropical Forest Soil	MQTHLTRTVRDIAGHVHPRGEHVTILGHWVELGTHRDLLRARWDSGDTAILLPKDVEEDWPSWHAHHDLRLA
Ga0212123_100780393	3300022557	Iron-Sulfur Acid Spring	MQTQLTRTVRDNSGHIHSRGEHVTILGYWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0179589_102913322	3300024288	Vadose Zone Soil	MQTHLTRIVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGVTAILLPEDVEEDSHNGTHITTFGSPNR
Ga0137417_14889071	3300024330	Vadose Zone Soil	MQTHLTRTVRDNAGHVHPRGEHVTILGHWLELGTHRDLLRARWDSGDTVILLPEDVEEDWPSWHAHHDLSARLIDD
Ga0207684_103563162	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQTHLTRTVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED
Ga0207684_110706641	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SLMQTHLTRTVRDNAGRIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEE
Ga0209648_101575511	3300026551	Grasslands Soil	MQTHLTRIVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRAQWDSGDAVILLPEDVEED
Ga0209648_106785382	3300026551	Grasslands Soil	MQTHLTSTVRDNAGHIHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEEDWPSWHAHHDLSARLIDD
Ga0179587_107451542	3300026557	Vadose Zone Soil	MQTHLTRTVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLREDVEED
Ga0208603_10499312	3300027109	Forest Soil	METHLARIVRDNAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAI
Ga0209528_10423122	3300027610	Forest Soil	MQTHLTRIVRDNVGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED
Ga0209330_10696172	3300027619	Forest Soil	MQTHLTRTVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLQARWDSGDAVILLPED
Ga0209117_11037391	3300027645	Forest Soil	MQTHLTRTVRDNAGRIHNRGEHVTILGHWLELGTHRDLLRARWESGDTAILLPEDV
Ga0209588_12445821	3300027671	Vadose Zone Soil	MQTHLTRIVRDNAGHVHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED
Ga0209118_12022382	3300027674	Forest Soil	MQTHLTRTVRDNAGHVHKRGEHVTILGHWLELGTHRDLLRARWDSGVTAILLPEDVEEDSHNGTHITTFGSPDR
Ga0209580_104094282	3300027842	Surface Soil	MQTHLTRIVHDNAGRIHNRGEHVTILGHWLELGTHRDLLRAQWDSGDTAILLPEDVEED
Ga0209180_103345521	3300027846	Vadose Zone Soil	MQTHLTRTVRDNAGHIHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEEDWPSWHADHDLSARLIDD
Ga0209701_101258882	3300027862	Vadose Zone Soil	MQTHLTRTVRDNAGHVHKRGEHITILGHWLELGTHRDLLRARWDSGDSVILLPEDVEED
Ga0209283_101512042	3300027875	Vadose Zone Soil	MQTHLTRTVRDNAGHIHPRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEEDWPSWHAHHDLSARLIDD
Ga0209169_106488112	3300027879	Soil	METHLTRIVRDNAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0209590_101084231	3300027882	Vadose Zone Soil	THLTRTVRDNAGHVHKRGEHVTILGHWLELGTHRDLLRARWDSGDSVILLPEDVEED
Ga0209380_100281023	3300027889	Soil	MQTHLTRTVRDSAGHIHNRGEHVTILGHWLELGTHRDLLRARWDSGVTAILLPEDVEEDSHNGTHITTFGSPDR
Ga0209624_105694962	3300027895	Forest Soil	TRTVRDNAGHVHKRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEEDWP
Ga0209624_108749662	3300027895	Forest Soil	MQTHLTRTVRDNAGHVHKRGEHVTILGHWLELGTHRDLLRARWDSGVTAI
Ga0209488_108329112	3300027903	Vadose Zone Soil	MQTHLTRIVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDTAILLPEDV
Ga0209006_102853732	3300027908	Forest Soil	MQTHLTRTVRDNAGHVHKRGEHVTILGHWLELGTHRDLLRARWDSGVTAILLPEDVEEDSHNGTHSTTFGSPDR
Ga0137415_103199982	3300028536	Vadose Zone Soil	MQTHLTRIVRDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDTAILLPED
Ga0308309_104659112	3300028906	Soil	METHLTRIVRDNAGHIHNRGEHVTILGHWLELGTYAQGLVAGRWDSGDTAILLPEDVEENWP
Ga0170824_1235813822	3300031231	Forest Soil	MQTHLTRIVRDNAGRTHNRGEHVTILGHWLELGTHRDLLQARWDSGDTAILLPEDVEED
Ga0310686_1060125022	3300031708	Soil	MQTHLTRTVRDNAGHIHNRGEHVTILGRWLELGTHRDLLRARWDSGDAVILLPQDVEED
Ga0310686_1066454272	3300031708	Soil	MQTHLTRTVRDNAGLIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTGILLPEDVEEDW
Ga0307469_116678702	3300031720	Hardwood Forest Soil	MQTHLTRTVRDNAGRIHNRGEHVTILGHWLELGTHRDLLQARWDSGDTAILLPQDVEED
Ga0307477_107303141	3300031753	Hardwood Forest Soil	MQTHLTRVVRDNAGHTHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED
Ga0307473_103603572	3300031820	Hardwood Forest Soil	MQTHLTRTVRDNVGRIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAILLPEDVEED
Ga0307473_108601032	3300031820	Hardwood Forest Soil	MQTHLTRVVRDNAGHTHNRGEHVTVLGHWLELGTHRDLLRARWDCGDAVILLPEDVEED
Ga0307479_116153412	3300031962	Hardwood Forest Soil	MQTHLTRTVRDNTGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLPEDVEED
Ga0307470_106857621	3300032174	Hardwood Forest Soil	MQTHLTRTVRDNVGRIHNRGEHVTILGHWLELGTHRDLLRARWDSGDTAVLLPEDVEED
Ga0307472_1009484691	3300032205	Hardwood Forest Soil	MQTHLTRTVRDNAGRIHNRGEHVTILGHWLELGTHRDLLRARWDSGDAVILLPEDVEEDQPDDRHITAFGSLGR
Ga0335085_118430351	3300032770	Soil	MQTHLTRTVRDNAGRIHNRGEDVTILGHWLELGTHRDLLRARWDSGDAVILLAEDVEED
Ga0335082_108326772	3300032782	Soil	MQTHLTRTVRDNAGRIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLREDVEED
Ga0335069_106894892	3300032893	Soil	MQTHLTRTARDNAGHIHNRGEHVTVLGHWLELGTHRDLLRARWDSGDAVILLREDVEED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103761

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences