Metagenome / Metatranscriptome Family F103760

Basic Information
Family ID	F103760
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	67 residues
Representative Sequence	AVKGIHVRIKGPKLNLRTKASNSKGVVKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG
Number of Associated Samples	88
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.901 % of family members)
Environment Ontology (ENVO)	Unclassified (23.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.485 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.19% β-sheet: 19.15% Coil/Unstructured: 77.66%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00196	GerE	39.60
PF07726	AAA_3	2.97
PF01882	DUF58	0.99
PF13519	VWA_2	0.99
PF00326	Peptidase_S9	0.99
PF00480	ROK	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.98
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.99

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.27%
Host-Associated	Host-Associated	26.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.27%
Plants	Host-Associated → Plants	26.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.92%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.49%
Loam	Environmental → Terrestrial → Soil → Loam	15.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.97%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.99%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005902	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010118	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026816	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)	Environmental	Open in IMG/M
3300026944	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N56_03915920	2170459012	Grass Soil	IHLTQDKKAAQGIHVRIKGPKLNIKTKASNARGVVKQTVKMKKAGVLIFTPIASKACNTKRVGVTNVFTPPVTG
C688J35102_1181027981	3300002568	Soil	IKGPKFNTRTGASNSKGVITQSVKLKKAGILVFSPIASKRCNTKRVGITGVFTPPVTG*
Ga0062595_1020669101	3300004479	Soil	GAAVAGVRVLIKGPHLLTRTGPSNSKGVITQQLKMKKAGIVTFTPIASKRCNTKRVGVTGVFTPPVTG*
Ga0066690_102364842	3300005177	Soil	AVKGIHVQIKGPKFSTRTGASNSKGVITQSVKMRKAGILVFSPLASKRCNTKRIGVTGVFTPPVTG*
Ga0066688_101726102	3300005178	Soil	TKLTIHVTQHGQAVKGIHVQIKGPKFSLRTGASNSKGVITQSVKMKKAGILVFSPIASKRCNTKRVGITGVFTPPVTG*
Ga0070671_1005208922	3300005355	Switchgrass Rhizosphere	NIRTGASNSKGVVKRTLKMKKAGVLIFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0070714_1006560232	3300005435	Agricultural Soil	GKAVKGIHVRIKGPKVNIKTTASDSKGVVKQTLKMKKAGVLVFTPIASKACNTRRVGVTNVFTPPVTG*
Ga0070714_1014451292	3300005435	Agricultural Soil	GVHVRITGPKTNIRTGASNSKGVITQQLKMKKAGILIFSPIASKKCNTRRVGVTGVFTPPVTG*
Ga0070711_1011353012	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VRITGPKINIRTKASNSKGVITRTITMKKAGILVFSPIASKRCNTQRVGVTNVFTPPVTG
Ga0070697_1006771651	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GPKFSKRTGASNSRGVITQTVKLKKAGILVFSPIASKRCNTKRVGITGVFTPPVTG*
Ga0068854_1014148792	3300005578	Corn Rhizosphere	HLTQGGKAVSGVHVRIKGPKINIRTGASNSKGVVKRTLKMKKAGVLIFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0066706_110470251	3300005598	Soil	VKGVHVQIKGPKTNIRTAASNGKGVITQNVKMKKAGILIFSPIASKRCNTKRVGVTNVFTPPVTG*
Ga0068856_1007050292	3300005614	Corn Rhizosphere	TQGGKAVKGIHVRIKGAKINIKTTASSSKGVITQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0066903_1078156561	3300005764	Tropical Forest Soil	AVKGIHVRIKGPKVNVKTTGSNAKGVIKHVIKMKKAGVLVFIPITPKGTAACNTKRVGVTNVFTPPVTG*
Ga0066903_1089027201	3300005764	Tropical Forest Soil	TRHGKAVKGIHVRITGPKTDVRTGASNGKGVIKHTLKMKSAGILILTPIAGKSCNTKRVGVTNVFTPPVTG*
Ga0075273_100231031	3300005902	Rice Paddy Soil	RGIHVRIKGPKLNARTKASNKKGVIKRVVKMRKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0070717_100288771	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KAVSGVHVRIKGPQLNIKTKASNSKGVVQQTVKMKKAGVLIFTPIASKACNTKRVGITNVFTPPVTG*
Ga0070717_105313241	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRITGPKTNIRTGASNSKGVITQQLKMKKAGILIFSPIASKKCNTKRVGVTGVFTPPVTG
Ga0070716_1008717452	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VHVRITGPKTNIRTGASNSKGVITQQVKMKKAGILIFSPIASKKCNTRRVGVTGVFTPPVTG*
Ga0070712_1014857082	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LSQHGKAAGGYRVRIKGPKINLRTKPSNHKGLVTQVVKLRKAGVVTFTPIASKACNTKRVGVTGVFTPPVTG*
Ga0066665_116582981	3300006796	Soil	KLTIHGTQHGLAVKGVHVQIKGPKTNIRTAASNGKGVITQNVKMKKAGILIFSPIASKRCNTKRVGVTNVFTPPVTG*
Ga0066659_108177531	3300006797	Soil	IHVTRHGQAVKGVHVQIKGPKFSLRTGASNSKGVITQSVKMKKAGILVFSPIASKRCNTKRVGITGVFTPPVTG*
Ga0066660_117102962	3300006800	Soil	PKLLIRTKRSNAKGVIKQNVKMKKAGAMIFTPIASKRCNTKRIGITNVFTPPVTG*
Ga0079221_103001751	3300006804	Agricultural Soil	GKAVKGIHVRITGPKINLRTKASNSKGIVKQTLKMKKAGVLVFSPIASKACNTKRVGVTNVFTPPVTG*
Ga0079221_104361012	3300006804	Agricultural Soil	HVTQHGKAKAGIRVLIRAPKLLLRTKPSNARGIIKQNVKMKKAGAMIFTPIASKRCNTKRIGITNVFTPPVTG*
Ga0075425_1021506292	3300006854	Populus Rhizosphere	HVLIKGPKLNLRTGASNSKGVITQQLKMKKAGIVVFSPIASKKCNTRRVGVTGVFTPPVTG*
Ga0075436_1010628051	3300006914	Populus Rhizosphere	PKVNLRTKPSNSKGVIVQRVKMKKAGILTFSPIASKKCNTKRVGVTQVFTPPVTG*
Ga0079219_115237061	3300006954	Agricultural Soil	KAVRGIHVRITGPKLNIRTKASNSKGVITRTVKLKKAGILIFSPIASKRCNTQRVGVTNVFTPPVTG*
Ga0105240_103166112	3300009093	Corn Rhizosphere	KAVKGIHVRIKGAKINVRTKASNANGLIKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0105245_121226601	3300009098	Miscanthus Rhizosphere	QGGKAVQGIHVRIKGAKINVRTKASNSKGLIKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0105237_105008772	3300009545	Corn Rhizosphere	AVKGVHVQIKGPKFSMRTGASNSKGVITQTVKMKKAGIMVFSPIASKRCNTKRVGITGVFTPPVTG*
Ga0105237_108761482	3300009545	Corn Rhizosphere	RISGAKINLRTKASNSKGIVKQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0126380_111623882	3300010043	Tropical Forest Soil	KNNQPVRGIRVLIKGPKINLRTKASNGKGVIKQSLKMKKHGILVFTPIASPHCNAKRLGVTGVFTPPVTG*
Ga0127465_10157312	3300010118	Grasslands Soil	KIHLTQGGKAVKGIQVRIKGAKVNLKTKASNSKGVVKQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0134065_104012781	3300010326	Grasslands Soil	AVSGYRVRIKGPKIDLRTKPSNQQGVVKQVVKLKKAGVVTFTPIASKACNTKRIGVTGVFTPPVTG*
Ga0126370_103431223	3300010358	Tropical Forest Soil	TIHVTQNKQPKAGVKVLIRAPKLLLRTKRSNARGIIKQNVKMKKAGAMIFTPIASKRCNTKRIGITNIFTPPVTG*
Ga0126372_108245311	3300010360	Tropical Forest Soil	RAVKGFRVRIKGPKVNIKTKPSNARGIIKQTIKAKKAGILVFTPIVAKPNTHCNTKRVGITGVFTPPVTG*
Ga0126377_130269012	3300010362	Tropical Forest Soil	NIKTSASNAKGVIKRSIKMRKAGVLLFIPLAPKGTAACNTRRVGVTNVFTPPVTG*
Ga0126379_101792401	3300010366	Tropical Forest Soil	HVTQNKKAVKGVHVLIKGPKLLVRTKASNSKGVIKQQVKMKKAGILVFTPIASKRCNTKRVGVTNVFTPPVTG*
Ga0126379_117001572	3300010366	Tropical Forest Soil	VHVLIKGPKLLVRTKASNSKGQIKQKVKMRKAGILVFTPIASKRCNTKRVGVTNVFTPPVTG*
Ga0105239_107534171	3300010375	Corn Rhizosphere	KGPKVNIRTKASNSKGIVKQTLKMKKAGILIFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0126381_1051580151	3300010376	Tropical Forest Soil	TMLNIHVTKQSRAVKGFLARIRGPKVNIKTEVSNSKGAIKQVVKMKKAGVLIFTPIASKKCNTKRVGVTGVFTPPVTG*
Ga0134126_104109871	3300010396	Terrestrial Soil	HVQIKGPKFNKRTGASNTKGVITQTVKLKKAGILIFSPIASKRCNTKRVGVTGVFTPPVTG*
Ga0137364_109660141	3300012198	Vadose Zone Soil	IHVTQGGKAVKGIKVRIKGAGINARTNASNSQGVIKHVLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0137383_111800321	3300012199	Vadose Zone Soil	TKLTIHVTQHGLAVKGVHVQIKGPKTNIRTAASNGKGVITRNVKMTKAGILIFSPIASKRCNTKRVGVTGVFTPPVTG*
Ga0137360_109937352	3300012361	Vadose Zone Soil	RIKGPKVNLRTKASNSKGIVKQTLKMKKAGVLVFTPIASKACNTKRVDATRVFTPPVSG*
Ga0150984_1075840742	3300012469	Avena Fatua Rhizosphere	HGKAKAGVRVLIKGPHFLKRTKASNAKGVIKQTVKMKKAGAMIFSPIASKRCNTKRIGVTGVFTPPVTG*
Ga0157303_102995232	3300012896	Soil	VRIKGPKVNIRTKASNSKGVVKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0164300_112188302	3300012951	Soil	LTQGGKAVAGIHVRIKGPQVNLRTGASNASGVVKQKLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0164303_106228601	3300012957	Soil	TIHVTQHGTAVKGVHVRITGPKTNIRTGASNSKGVITQQVKMKKAGILIFSPIASKKCNTKRVGVTGVFTPPVTG*
Ga0164303_114324352	3300012957	Soil	TAVKGVHVRITGPKTNIRTGASNSKGVITQQLKMKKAGILIFSPVASKKCNTRRVGVTGVFTPPVTG*
Ga0164299_101212262	3300012958	Soil	AVKGVHVRITGPKTNIRTGASNSKGVITQQLKMKKAGILIFSPVASKKCNTRRVGVTGVFTPPVTG*
Ga0164299_115806161	3300012958	Soil	IHVRIKGPKLNLRTKASNSKGVVKQTLKMKKAGILVFSPIASKRCNTKRVGITGVFTPPVTG*
Ga0164307_115673391	3300012987	Soil	MKGPKVNVRTKASNSKGVVKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0157371_104915021	3300013102	Corn Rhizosphere	HVRIKGPKVNIKTTASNSKGVVKQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0157372_111803661	3300013307	Corn Rhizosphere	QGGKAVKGIHVRITGAKINLRTKASNSKGIVKQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0120132_11426202	3300013832	Permafrost	EHQELARPEIKGIHVRIKGPKVNVKTTASNSKGVIKHQITIKKAGVLIFTPIASKACNTKRVGVTNVFPPPVTG*
Ga0134079_102159072	3300014166	Grasslands Soil	TIHVTQHGKAKAGVRVLIKGPHFLKRTKASNAKGVIKQTVKMKKAGALIFSPIASKRCNTKRIGITNVFTPPVTG*
Ga0163163_105598301	3300014325	Switchgrass Rhizosphere	KLTIHVTQNKKAVQGIHVQIKGPKINLRTGASNSKGVITQQLKMKKAGILIFSPIASKKCNTKRVGVTNVFTPPVTG*
Ga0182008_106135551	3300014497	Rhizosphere	TNLTIHVTRHGKAVKGIRVTIKGPKLNIRTKASNSKGVIKKTVKLKKAGVLVFSPIASKRCNTKRVGVTGVFTPPVTG*
Ga0157379_111664142	3300014968	Switchgrass Rhizosphere	KINVRTKASNANGLIKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0134072_100992071	3300015357	Grasslands Soil	PKFNTRTGASNSKGVITQSVKLKKAGILVFSPIASKRCNTKRVGITGVFTPPVTG*
Ga0134072_102373722	3300015357	Grasslands Soil	VTQHGKAVQGVHVRIKGPKLDVRTAASNGKGVVTRTVKLKKAGILIFSPIASKRCNTKRVGVTNVFTPPVTG*
Ga0134072_104137661	3300015357	Grasslands Soil	KGIHVRITGPKTNVRTAASNGSGVIKHVLKMKKAGVLIFSPIASKRCNTQRVGVTNVFTPPVTG*
Ga0132258_126041391	3300015371	Arabidopsis Rhizosphere	GAKINVRTKASNANGLIKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG*
Ga0132257_1032347932	3300015373	Arabidopsis Rhizosphere	VKGIHVRIKGPKVNVKTKASNAKGVITHVIKMKKAGVLVFTPIATKRCNTKRVGVTNVFTPPVTG*
Ga0132257_1035456332	3300015373	Arabidopsis Rhizosphere	VKGIHVRITGPKTNIRTAASNSKGIITHQLKMKKAGVLVFSPIASKRCNTQRVGVTNVFTPPVTG*
Ga0187786_106388031	3300017944	Tropical Peatland	KTSLTIHLTRHGTAVKGIRVWIKGAKLNLRTKPSNGKGVINQKVRPTKAGIVVFTPLASPHCGTKRLGVTGVFTPPVTG
Ga0187778_110209191	3300017961	Tropical Peatland	TQHGDAAKGVRVRITGPKVDVRTKPSDRKGVIARSITLKKAGILIFSPIASKRCNTQRVGVTNVFTPPVTG
Ga0187776_108823011	3300017966	Tropical Peatland	VRIKGASINVRTGASNGKGVVKHTLKMKKAGILIFTPIASKACNTKRVGVTNVFTPPVTG
Ga0187777_106562572	3300017974	Tropical Peatland	KGPKLDVRTQASSAKGVIKHVVKMEKAGILIFTPIASKSCNTMRVGVTDVFTLPVTG
Ga0187773_107252761	3300018064	Tropical Peatland	RHGTAVKGIRVWIKGAKLNLRTKPSNGKGVINQKVRPTKAGIVVFTPLASPHCGTKRLGVTGVFTPPVTG
Ga0173482_103001181	3300019361	Soil	VKGIHVRIKGPKINLRTKASNAKGLIKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0173482_106589491	3300019361	Soil	KKAVKGVHVRIKGPKVDIKTGASNSKGIVIQKIKMKKAGILIFSPIASKRCNTKRVGVTNVFTPPVTG
Ga0247745_10466982	3300022898	Soil	DSTTLKVKAVKGVHVRIKGPKVNIKTGASNSKGVITQKIKMKKAGILIFIPIADKHCNTKRVGVTNVFTPPVTG
Ga0247669_10183871	3300024182	Soil	PKVNIKTTASNSKGVVKQTLKMKKAGVLVFTPIASKACNTRRVGVTNVFTPPVTG
Ga0247664_10834131	3300024232	Soil	GIHVRIKGPKVNIKTTASNSKGVVKQTLKMKKAGVLVFTPIASKACNTRRVGVTNVFTPPVTG
Ga0247676_10321362	3300024249	Soil	KGNHVRIKGAKINLKTKASSSKGLIKQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0207710_102769221	3300025900	Switchgrass Rhizosphere	IHVRIKGAKINVRTKASNANGLIKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0207699_100254601	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AKINIKTTASSSKGVITQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0207695_103772042	3300025913	Corn Rhizosphere	TQGGKAVKGIHVRITGAKINLRTKASNSKGIVKQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0207671_103882311	3300025914	Corn Rhizosphere	KLTIHVTKHGKAVKGIHVQIKGPKFNQRTGASNSKGVITQTVKLKKAGILVFSPIASKRCNTKRVGITGVFTPPVTG
Ga0207663_100264325	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VRIKGAKINIKTTASSSKGVITQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0207660_107694263	3300025917	Corn Rhizosphere	LTIHLTKHGKAVKGIKVRIKGPKLNLTTKRSNAKGVVKQVVKMKKAGIMIFSPVASKRCNTKRVGVTNVFTPPVTG
Ga0207664_101757581	3300025929	Agricultural Soil	HVRITGPKTNIRTGASNSKGVITQQVKMKKAGILIFSPIASKKCNTRRVGVTGVFTPPVT
Ga0207706_113939612	3300025933	Corn Rhizosphere	LKIHVTQGGKAVKGIHVRIKGAKINVRTKASNANGLIKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0207706_114879721	3300025933	Corn Rhizosphere	HVRIKGAKINIRTKASNSKGVIKTTLKLKKAGVLVFSPIASKKCNTKRVGVTGVFTPPVT
Ga0207665_100791142	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	IKLTIHVTQNKKAVKGVHVRITGPKTNIRTGASNSKGVITQQLKMKKAGILIFSPIASKKCNTKRVGVTGVFTPPVTG
Ga0207702_114299811	3300026078	Corn Rhizosphere	VRIKGPKVNIKTKASNSKGVVKQTLKMKKAGVLVFTPIASKRCNTRRVGVTNVFTPPVTG
Ga0207641_115128672	3300026088	Switchgrass Rhizosphere	IKGPKVDIRTKPSNSKGVIVQQVKMKKAGILIFSPIASKRCNTKRVGVTNVFTPPVTG
Ga0207683_120824561	3300026121	Miscanthus Rhizosphere	VQGVRVRIKGPKVDIRTKPSNSKGVIVQQVKMKKAGILIFSPIASKRCNTKRVGVTNVFTPPVTG
Ga0209056_102853563	3300026538	Soil	KLTIHGTQHGLAVKGVHVQIKGPKTNIRTAASNGKGVITQNVKMKKAGILIFSPIASKRCNTKRVGVTNVFTPPVTG
Ga0207509_1020581	3300026816	Soil	KINVRTKASNANGLIKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0207570_10105321	3300026944	Soil	GKAVKGIRVTIKGPKLNIRTKASNSKGVIKKTVKLKKAGVLVFSPIASKRCNTKRVGVTGVFTPPVTG
Ga0209579_107953902	3300027869	Surface Soil	IHLTKNNKAVSGIHVRIKGPKLNLKTKASNSKGMIKQTVKMKKAGVLIFTPIASKACNTKRVGVTNVFTPPVTG
Ga0247682_11090782	3300028146	Soil	AIKGIHVRIKGPKVNIKTTASNSKGVVKQTLKMKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0170824_1226789342	3300031231	Forest Soil	TTLTIHVTKQGKAVKGVRVLIKGPKLNLRTKPSNSEGVIKQQVKMKKAGIVTFTPIASKRCNTKRVGVTGVFTPPVTG
Ga0170818_1063695832	3300031474	Forest Soil	VTIHLTQGGKAVKGIHVRITGAKINVRTGASNSKGVVKHTLKMKKAGVLVFSPIASKRCNTQRVGVTNVFTPPVTG
Ga0307469_124638272	3300031720	Hardwood Forest Soil	AVKGIHVRIKGPKLNLRTKASNSKGVVKQTLKMKKAGILVFTPIASKACNTKRVGVTNVFTPPVTG
Ga0308174_110811612	3300031939	Soil	TNLKIHLTQGGKAVKGIHVKIKGPKLNIRTGASNSKGLIKQTLKMKKAGVLIFTPIASKACNTKRVGVTNVFTPPVTG
Ga0310811_104601522	3300033475	Soil	IKGAKVNLRTGASNSKGVIKTTLKLKKAGVLVFTPIASKACNTKRVGVTNVFTPPVTG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103760

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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