Metagenome Family F103749

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103749
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	61 residues
Representative Sequence	MATNLVIDADGHCYEPDIGLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRW
Number of Associated Samples	91
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.01 %
% of genes near scaffold ends (potentially truncated)	98.02 %
% of genes from short scaffolds (< 2000 bps)	91.09 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.149 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (11.881 % of family members)
Environment Ontology (ENVO)	Unclassified (42.574 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.663 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.76% β-sheet: 18.82% Coil/Unstructured: 69.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09601	DUF2459	4.95
PF09084	NMT1	3.96
PF00932	LTD	1.98
PF00311	PEPcase	1.98
PF10042	DUF2278	1.98
PF02800	Gp_dh_C	1.98
PF00561	Abhydrolase_1	0.99
PF04463	2-thiour_desulf	0.99
PF03466	LysR_substrate	0.99
PF01035	DNA_binding_1	0.99
PF02870	Methyltransf_1N	0.99
PF04909	Amidohydro_2	0.99
PF00296	Bac_luciferase	0.99
PF01494	FAD_binding_3	0.99
PF04392	ABC_sub_bind	0.99
PF05119	Terminase_4	0.99
PF02436	PYC_OADA	0.99
PF07883	Cupin_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	3.96
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	3.96
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	1.98
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.98
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.98
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	1.98
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.99
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.99
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.99
COG1683	Uncharacterized conserved protein YbbK, DUF523 family	Function unknown [S]	0.99
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.99
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.99
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.99
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.15 %
Unclassified	root	N/A	14.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.15 %
Unclassified	root	N/A	14.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.15 %
Unclassified	root	N/A	14.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.32 %
Unclassified	root	N/A	14.85 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	58.42 %
Unclassified	root	N/A	14.85 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	58.42 %
Unclassified	root	N/A	14.85 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.97 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	58.42 %
Unclassified	root	N/A	14.85 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.97 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.98 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.99 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	58.42 %
Unclassified	root	N/A	14.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.97 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.98 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.99 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	58.42 %
Unclassified	root	N/A	14.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.97 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.98 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.99 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	58.42 %
Unclassified	root	N/A	14.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.97 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.98 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.99 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_8287_length_2746_cov_10.615076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2778	Open in IMG/M
2199352025\|deepsgr__Contig_29088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2048	Open in IMG/M
2228664021\|ICCgaii200_c0836489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1898	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101077711	Not Available	625	Open in IMG/M
3300000550\|F24TB_14258325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	893	Open in IMG/M
3300000789\|JGI1027J11758_12391086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300000955\|JGI1027J12803_108189309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1077	Open in IMG/M
3300001372\|YBBDRAFT_1160604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1182	Open in IMG/M
3300003998\|Ga0055472_10086938	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300004007\|Ga0055476_10291365	Not Available	575	Open in IMG/M
3300004463\|Ga0063356_103757998	Not Available	654	Open in IMG/M
3300004463\|Ga0063356_105988892	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300004463\|Ga0063356_106519201	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300004782\|Ga0062382_10254835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300005168\|Ga0066809_10148301	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005218\|Ga0068996_10055569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	788	Open in IMG/M
3300005295\|Ga0065707_10624691	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005468\|Ga0070707_100319878	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300005518\|Ga0070699_102065675	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300005530\|Ga0070679_101573882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300005543\|Ga0070672_101767802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300005713\|Ga0066905_101353910	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300006034\|Ga0066656_10120187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1615	Open in IMG/M
3300006173\|Ga0070716_101128018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300006845\|Ga0075421_100488377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1465	Open in IMG/M
3300006845\|Ga0075421_101186766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300006852\|Ga0075433_10210933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1726	Open in IMG/M
3300006914\|Ga0075436_100257430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1244	Open in IMG/M
3300007004\|Ga0079218_10564562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	1027	Open in IMG/M
3300007619\|Ga0102947_1417816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300007769\|Ga0102952_1325352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300009087\|Ga0105107_10553592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	801	Open in IMG/M
3300009153\|Ga0105094_10276193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	966	Open in IMG/M
3300009156\|Ga0111538_10063053	All Organisms → cellular organisms → Bacteria	4725	Open in IMG/M
3300009162\|Ga0075423_10168426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2300	Open in IMG/M
3300009176\|Ga0105242_11062520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300009176\|Ga0105242_13104132	Not Available	515	Open in IMG/M
3300009514\|Ga0129284_10005025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7440	Open in IMG/M
3300009678\|Ga0105252_10064650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1411	Open in IMG/M
3300010043\|Ga0126380_11818581	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300010047\|Ga0126382_11465833	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300010362\|Ga0126377_10630733	All Organisms → cellular organisms → Bacteria → Proteobacteria	1119	Open in IMG/M
3300010362\|Ga0126377_12953303	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300010362\|Ga0126377_13229257	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300010362\|Ga0126377_13529747	Not Available	506	Open in IMG/M
3300011423\|Ga0137436_1078229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	862	Open in IMG/M
3300011427\|Ga0137448_1167248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300011432\|Ga0137428_1027064	Not Available	1454	Open in IMG/M
3300011443\|Ga0137457_1136336	Not Available	807	Open in IMG/M
3300011444\|Ga0137463_1085960	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1181	Open in IMG/M
3300012041\|Ga0137430_1057227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1063	Open in IMG/M
3300012096\|Ga0137389_11294120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300012164\|Ga0137352_1121884	Not Available	513	Open in IMG/M
3300012189\|Ga0137388_10622243	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300012203\|Ga0137399_11299550	Not Available	611	Open in IMG/M
3300012228\|Ga0137459_1033919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1440	Open in IMG/M
3300012512\|Ga0157327_1054172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300012922\|Ga0137394_10420357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1139	Open in IMG/M
3300012922\|Ga0137394_11308551	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300012929\|Ga0137404_10417517	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300012972\|Ga0134077_10596443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300014310\|Ga0075331_1200011	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300014314\|Ga0075316_1051187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	898	Open in IMG/M
3300014864\|Ga0180068_1094128	Not Available	503	Open in IMG/M
3300014885\|Ga0180063_1094895	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300015258\|Ga0180093_1125267	Not Available	646	Open in IMG/M
3300015264\|Ga0137403_10573178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	995	Open in IMG/M
3300015358\|Ga0134089_10050642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1513	Open in IMG/M
3300016404\|Ga0182037_10744399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	842	Open in IMG/M
3300016404\|Ga0182037_11915303	Not Available	531	Open in IMG/M
3300017997\|Ga0184610_1070360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1068	Open in IMG/M
3300018063\|Ga0184637_10198781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1230	Open in IMG/M
3300018074\|Ga0184640_10238477	Not Available	825	Open in IMG/M
3300018076\|Ga0184609_10560107	Not Available	515	Open in IMG/M
3300018429\|Ga0190272_13074107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300018465\|Ga0190269_11688130	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300019377\|Ga0190264_10938599	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300020001\|Ga0193731_1065486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300020006\|Ga0193735_1003029	All Organisms → cellular organisms → Bacteria → Proteobacteria	5441	Open in IMG/M
3300020022\|Ga0193733_1147003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300022756\|Ga0222622_11206138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300025567\|Ga0210076_1126579	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300025917\|Ga0207660_11425752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300025921\|Ga0207652_11354525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300025930\|Ga0207701_10028231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5319	Open in IMG/M
3300027471\|Ga0209995_1098070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300027778\|Ga0209464_10292910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300027909\|Ga0209382_10202138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2277	Open in IMG/M
3300027909\|Ga0209382_10428454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1469	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10107852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300031716\|Ga0310813_10261938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1444	Open in IMG/M
3300031754\|Ga0307475_10238099	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300031949\|Ga0214473_11236818	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031962\|Ga0307479_11019516	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300032005\|Ga0307411_10555575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	980	Open in IMG/M
3300032144\|Ga0315910_10949900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300032174\|Ga0307470_10122831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1537	Open in IMG/M
3300033004\|Ga0335084_10109498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2872	Open in IMG/M
3300033412\|Ga0310810_11342415	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300033480\|Ga0316620_10306209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1393	Open in IMG/M
3300034176\|Ga0364931_0184948	Not Available	677	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.17%
Host-Associated	Host-Associated	16.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.44%
Aquatic	Environmental → Aquatic	26.73%
Plants	Host-Associated → Plants	16.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.45%
Sediment	Environmental → Aquatic → Sediment	16.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.88%
Marine	Environmental → Aquatic → Marine	4.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.95%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Unclassified	Environmental → Aquatic → Unclassified	0.99%
Floodplain	Environmental → Terrestrial → Floodplain	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	16.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.89%
Loam	Environmental → Terrestrial → Soil → Loam	7.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.95%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.99%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.99%
Sand	Environmental → Terrestrial → Soil → Sand	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	16.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.99%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	11.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.98%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004007	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007619	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D2_MG	Environmental	Open in IMG/M
3300007769	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009514	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - F-1W	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_02376520	2140918013	Soil	MARNLVIDADGHCYEPDSELVKWMPKELAHLAPNRVIDSSGYSHLMIEGRLAARRRWGGGADRGQVFAPHIERSRP
deepsgr_00095890	2199352025	Soil	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRITDSSGYSHLMIEGRLSSRRRXXXGPPRAEGFRAAHRASPTRHD
ICCgaii200_08364893	2228664021	Soil	MGRDLVIDADGHCYEPDNELAKWMPKEYAHLAPNRVSDSSGYNHLMIEG
INPhiseqgaiiFebDRAFT_1010777113	3300000364	Soil	MATNLVIDADGHCYEPDVGLVKWLPKESAHLAPNRVTDSSGYSHLMIEGRLAGRRRWG
F24TB_142583252	3300000550	Soil	MPTQIVIDADGHCNEPDSELAKWMPKELAHLAPNRVTDSSGYSHLMIEG
JGI1027J11758_123910863	3300000789	Soil	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLSSRRRWGGGPDRAEVFSSHIER
JGI1027J12803_1081893093	3300000955	Soil	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLSSRRRWGGGPDRAEVF
YBBDRAFT_11606042	3300001372	Marine Estuarine	MADYLVIDADGHCYEPDNELAKWMPKEYVHVAPNRVTDSSGYSHLMLEGR
Ga0055472_100869381	3300003998	Natural And Restored Wetlands	MSKHLVIDADGHCYEPDSGLAKYMPKEMAHLAPNRVTDSSGYSHLMIEGRLAGR
Ga0055476_102913651	3300004007	Natural And Restored Wetlands	MGKNLVVDADGHCYEPDTGLAEWLPENLKHLAPNRVTDSSGYSHLMIE
Ga0063356_1037579981	3300004463	Arabidopsis Thaliana Rhizosphere	MARNLVIDADGHCYEPDSELAQWMPKELAHLAPNRVTDSSGYSHLMIEGRLAARRRWGGGPDRGQVFASH
Ga0063356_1059888921	3300004463	Arabidopsis Thaliana Rhizosphere	MSKQLVIDADGHCYEPDSGLAKYMPKEMAHLAPNRVTDSSGYSHLMIEGRLAG
Ga0063356_1065192012	3300004463	Arabidopsis Thaliana Rhizosphere	MARNLVIDADGHCYEPDSELAKWMPKELAHLAPNRVTDSSGYSHLMIEGRLAARRRWGGGADRGQVFAPHIERSR
Ga0062382_102548351	3300004782	Wetland Sediment	MADYFVIDADGHCHEPEGPSLAKWVPKEYAHLVPNRVTDSAGYGHMMVEGRLSSRRRWGGGWD
Ga0066809_101483012	3300005168	Soil	MPTNLVIDADGHCYEPDAGLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGG
Ga0068996_100555691	3300005218	Natural And Restored Wetlands	MATNLVIDADGHCYEPDSNLAKWMPREMAQLAPNRVTDSSGYSHLIIEGRLAGRRRWG
Ga0065707_106246911	3300005295	Switchgrass Rhizosphere	MADYLVIDADGHCYEPDNELAKWMPKEYAHLAPNRVSDSSGYNHLMIEGRLS
Ga0070707_1003198781	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MATNLVIDADGHCYEPDNSLAKWMPKEYAHLAPNRVSDSSGYSHLMIEGRLAGRRRWGGGADRGAVF
Ga0070699_1020656751	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MATNLVIDADGHCYEPDNGLAKWMPKEYAPLAPNRVSDSSGYSHLMIEGRLAGRRRWGGGADRGAVFAEHIERSR
Ga0070679_1015738822	3300005530	Corn Rhizosphere	MASPLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVSDSSGYSHLMI
Ga0070672_1017678023	3300005543	Miscanthus Rhizosphere	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLSS
Ga0066905_1013539102	3300005713	Tropical Forest Soil	MPTHLVIDADGHCNEPDTGLVRWLPKEYAHLAPNRVTDSSGYSHLMIE
Ga0066656_101201873	3300006034	Soil	MPTHIVIDADGHCNEPDNELAKWMPKELAHLAPSRVTDSSGYSHLMIEGRLAGRRRWGGGTDRCAVFASHI
Ga0070716_1011280183	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MATNLVIDADGHCYEPDDSLAKWMPKECAHLAPNRVSDSSGYSHLMIEGRLAGRRRWGGGADRGAVFAEHI
Ga0075421_1004883773	3300006845	Populus Rhizosphere	MANHLVIDADGHCNEPDSELAKWMPKEIAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGADR
Ga0075421_1011867662	3300006845	Populus Rhizosphere	MASDLVIDADGHCYEPDNQLAKWMPKEIAHLAPNRVTDSSGYSHLMVEGRLAGRRRWGGGADRGEVFA
Ga0075433_102109333	3300006852	Populus Rhizosphere	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLSSRRRWGGG
Ga0075436_1002574303	3300006914	Populus Rhizosphere	MARNLVIDADGHCYEPDADLAKWMPAEFARRAPNRVSDSSGYSHLMIE
Ga0079218_105645621	3300007004	Agricultural Soil	MARNLVVDADGHCYEPDSELAKWMPKELAHLAPNRVTDSSGYSHLMIEGRLAARRRWGGGADRGQVFA
Ga0102947_14178161	3300007619	Soil	MGKYLVVDADGHCQEPDTGLAQWMPQELKHLAPNRVTDSSGYSHLMVEGRLAANRRWGGGPDRGKIFADHIETSRPGM
Ga0102952_13253521	3300007769	Soil	MPTNLVVDADGHCQEPDTGLAEWLPEKFKHLAPNRVTDSSGYSHLMIESRLAARRRWGGGPDRGAVFADHIETSRPGMTDAT
Ga0105107_105535922	3300009087	Freshwater Sediment	MARNLVIDADGHCYEPDNELAKWLPKEFAKRAPNRVTDSSGYSHLMIGGRLGGRRRWGGGDDRAEVFAPHIERSRPGMT
Ga0105094_102761931	3300009153	Freshwater Sediment	MARNLVIDADGHCYEPDTELAKWMPKEFAKRAPNRVTDSSGYSHLMIEGRLGGRRRWGGGEDRAEVF
Ga0111538_100630532	3300009156	Populus Rhizosphere	MAKNLVIDADGHCYEPDADLAKWMPAEFARRAPNRVSDSSGYSHLMIEGRLSSRRRWGG*
Ga0075423_101684264	3300009162	Populus Rhizosphere	MPTHIVIDADGHCNEPDSELAKWMPKELAHLAPNRVTDSSGYSHLMI
Ga0105242_110625201	3300009176	Miscanthus Rhizosphere	MAPNFVIDADGHCYEPDNQLAKWMPKEMAHLAPNRVTDSSGYSHLMVEGRLAGRRRWGGG
Ga0105242_131041321	3300009176	Miscanthus Rhizosphere	MSNNLVIDADGHCHEPEDLTKWMPKEMAHLAPNRVTDSSGYTHLMVEGRLAGRRRW
Ga0129284_100050251	3300009514	Beach Aquifer Porewater	MGKNLVVDADGHCHEPEADLAAWLPEKFKHLAPNRVTDSSGYSHLLIEGRLAGRRRWGGGPDRG
Ga0105252_100646501	3300009678	Soil	MAEYLVIDADGHCYEPDNELAKWMPKEYAHLAPNRVTDSSGYSHLMIE
Ga0126380_118185812	3300010043	Tropical Forest Soil	MASHLVIDADGHCNEPDVGLAKWMPKELAHLAPNRVTDSSGYSHLMIEGRLAARRRWGGGNDR
Ga0126382_114658331	3300010047	Tropical Forest Soil	MPTHLVIDADGHCNEPDTGLVKWLSKEYAHLAPNRVTDSSGYSHLMIEGRL
Ga0126377_106307331	3300010362	Tropical Forest Soil	MLTHLVIDADGHCNEPDTGLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLA
Ga0126377_129533032	3300010362	Tropical Forest Soil	MPTHLVIDADGHCNEPDTGLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGG
Ga0126377_132292571	3300010362	Tropical Forest Soil	MTTNLVIDADGHCNEPDTGLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLA
Ga0126377_135297472	3300010362	Tropical Forest Soil	MPINLVIDADGHCNEPDTGLMKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGR
Ga0137436_10782291	3300011423	Soil	MAPNLVIDADGHCYEPDNQLAQWMPKEMAHLAPNRVSDSSGYSHLMIEGRLAGRRRWGGGADRGEVFASHIE
Ga0137448_11672481	3300011427	Soil	MANSLVIDADGHCYEPDNDLAKWMPKELAHLAPNRVTDSSGYTHLMIEGRLAGRRRWGGGADRGEVFA
Ga0137428_10270641	3300011432	Soil	MATNLVIDADGHCYEPDAGLAKWLPKEYAHLAPSRVTDSSGYSHLMIEGRLAARRRWGGGPDRGAVF
Ga0137457_11363361	3300011443	Soil	MAHNLVIDADGHCYEPDSELARWMPKEMAHIAPNRVTDSSGYSHLMIEGRLAGRRRWGGGADRGEVFASHIE
Ga0137463_10859603	3300011444	Soil	MATHLVIDADCHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLSSRRRWGGGPDRAEVFAPHIERARPGMTDP
Ga0137430_10572271	3300012041	Soil	MSDYLVIDADGHCYEPDTELAKWMPKEYAHLAPNRVTDSSGYNHLMIEGR
Ga0137389_112941201	3300012096	Vadose Zone Soil	MATNLVVDADGHCYEPDGNLARWMPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRW
Ga0137352_11218841	3300012164	Soil	MSKHLVIDADGHCNEPDSGLAKFMPKEVAHLAPNRVTDSSGYTHLMIEGRLAARRRWGGGVDRGAVFADHIERSR
Ga0137388_106222431	3300012189	Vadose Zone Soil	MATNLVVDADGHCYEPDGNLARWMPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGADRCAVFADHIERSR
Ga0137399_112995503	3300012203	Vadose Zone Soil	MATNLVIDADGHCYEPDVGLLQWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGADRGA
Ga0137459_10339191	3300012228	Soil	MAPNLVIDADGHCYEPDNQLAQWMPKEMAHLAPNRVSDSSGYSHLMIEGR
Ga0157327_10541721	3300012512	Arabidopsis Rhizosphere	MATHLVIDADGHCYEPDNYLAKWMPAEFAKRAPNRVADSSGYSHLMIEGRLSSRRR
Ga0137394_104203571	3300012922	Vadose Zone Soil	MPTNLVIDADGHCYEPDAGLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAG
Ga0137394_113085512	3300012922	Vadose Zone Soil	MATHLVIDADGHCYEPDNDLVKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLSSR
Ga0137404_104175171	3300012929	Vadose Zone Soil	MATNLVIDADGHCYEPDVGLVQWLPEEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGAD
Ga0134077_105964431	3300012972	Grasslands Soil	MPTHIVIDADGHCNEPDSELAKWMPKELAHLAPTRVTDSSGYSHLMIEGRLAGRRRWGGGTDR
Ga0075331_12000111	3300014310	Natural And Restored Wetlands	MANRLVIDADGHCYEPDSELAKWMPAEFARRAPNRVTDSSGYSHLMLEGR
Ga0075316_10511871	3300014314	Natural And Restored Wetlands	MARDLVIDAGGHCYEPDNELAKWMPKELAHLAPNRVSDSSGYSHLMIEGRLAARRRWGGGAA
Ga0180068_10941281	3300014864	Soil	MSKHLVIDADGHCNEPDSGLAKFMPKEIAHLAPNRVTDSSGYTHMMIEGRLAA
Ga0180063_10948951	3300014885	Soil	MSKHLVIDADGHCNEPDSGLAKFMPKEVAHLAPNRVTDSSGYTHLMIEGRLAARRR
Ga0180093_11252672	3300015258	Soil	MATNLVIDADGHCYEPDAGLAKWLPKEYAHLAPSRVTDSSGYSHLMIEGRLAARRRWGG
Ga0137403_105731781	3300015264	Vadose Zone Soil	MPTNLVIDADGHCYEPDAGLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGADRGAV
Ga0134089_100506423	3300015358	Grasslands Soil	MPTHIVIDADGHCNEPDNELAKWMPKELAHLAPSRVTDSSGYSHLMIEGRLAGRRRWGGGTDRCAVFASHIERSR
Ga0182037_107443992	3300016404	Soil	MAKNLVIDADGHCYEPDTELVKWMPKEFASRAPNRVADSSGYSHLIIEGRLSSRRRWGGGVDRSEVFASHIER
Ga0182037_119153031	3300016404	Soil	MTTDLVIDADGHCYEPDTDLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGTDR
Ga0184610_10703604	3300017997	Groundwater Sediment	MATNIVIDADGHCNEPDNELAKWMPKEIAHLAPNRVTDSSGYSHLVIEGRLAA
Ga0184637_101987811	3300018063	Groundwater Sediment	MATNIVIDADGHCNEPDNELAKWMPKEIAHLAPNRVTDSSGYSHLVIEGRLA
Ga0184640_102384772	3300018074	Groundwater Sediment	MATNLVIDADGHCYEPDVGLVHWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGADRGAVFADHIERS
Ga0184609_105601071	3300018076	Groundwater Sediment	MATNIVIDADGHCNEPDNELAKWMPKEIAHLAPNRVTDSSGYSHLVIEGRLAARRRW
Ga0190272_130741072	3300018429	Soil	MADYLVVDADGHCQEPENDFAKWMPKEYAHLAPNRVTDSSGYNHLMIEGRLGGRRRWGGGPDRG
Ga0190269_116881301	3300018465	Soil	MADNLVIDADGHCYEPDNDLAKWMPKEFAHLAPNRVTDSSGYSHLMLEGRLSSRRR
Ga0190264_109385991	3300019377	Soil	MADYLVIDADGHCHEPENDDFAKWMPKEYAHLAPKRVTDSSGYGHMILEGRLSSRRRWGGGADRGEVFAP
Ga0193731_10654861	3300020001	Soil	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLS
Ga0193735_10030291	3300020006	Soil	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLSSRRR
Ga0193733_11470031	3300020022	Soil	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMIEGRLSSRRRWGGGPDRAEVFAPH
Ga0222622_112061381	3300022756	Groundwater Sediment	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMLEGRLSSRR
Ga0210076_11265792	3300025567	Natural And Restored Wetlands	MARNLVIDADGHCYEPDSELAKWMPKELAHLAPNRVTDSSGYSHLMIEGRLAARRRWGGGADRGQVFAPHIERS
Ga0207660_114257521	3300025917	Corn Rhizosphere	MARDLVIDADGHCYEPDTELAKWMPKELARLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGAD
Ga0207652_113545252	3300025921	Corn Rhizosphere	MASPLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVSDSSGYSHLMIEGRL
Ga0207701_100282317	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAEYLVIDADGHCYEPDNDLAKWMPKEFAHLAPNRVTDSSGYSHLMLEGRLSSRRRWGGGSDRGEVFA
Ga0209995_10980702	3300027471	Arabidopsis Thaliana Rhizosphere	MARNLVIDADGHCYEPDSELVKWMPKELAHLAPNRVIDSSGYSHLMIEGRLAARRRWGG
Ga0209464_102929102	3300027778	Wetland Sediment	MADHLVIDADGHCHEPEGPSLVKWMPKEYAHLAPNRVTDSAGYGHMMVEGRLSSRRRWGG
Ga0209382_102021383	3300027909	Populus Rhizosphere	MGRDLVIDADGHCYEPDGDLARWMPKKLAHLAPNRVTDSSGYSHLMVEGRLAARRRWGGGADRGQVFAPHIE
Ga0209382_104284541	3300027909	Populus Rhizosphere	MANHLVIDADGHCNEPDSELAKWMPKEIAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGADRG
(restricted) Ga0255310_101078522	3300031197	Sandy Soil	MTRDLVIDADGHCYEPDTELAKWMPKELAHLAPNRVTDSSGYSHLMVEGRLAGRRR
Ga0310813_102619381	3300031716	Soil	MANLVIDADGHCYEPDNDLAKWMPKEMAHLAPNRVTDSSGYGHLMIEGRLAG
Ga0307475_102380991	3300031754	Hardwood Forest Soil	MATNLVIDADGHCYEPDDSLAKWMPKECAHLAPNRVSDSSGYSHLMIEGRLAGRRRWGGGADRGAVFAEHIERSR
Ga0214473_112368182	3300031949	Soil	MSKYLVIDADGHCYEPDSDLAKYMPKEIAHLAPNRVTDSSGYSHLMIEGRL
Ga0307479_110195161	3300031962	Hardwood Forest Soil	MATNLVIDADGHCYEPDGSLAKWMPKECAYLAPNRVSDSSGYSHLMIEGRLAG
Ga0307411_105555751	3300032005	Rhizosphere	MAEYLVIDADGHCYEPDNDLAKWMPKEFAHLAPNRVTDSSGYSHLMLE
Ga0315910_109499002	3300032144	Soil	MARNFVIDADGHCYEPDSDLAKWMPKELAHLAPNRVTDSSGYSHLLIEGRLAARRRWGGG
Ga0307470_101228311	3300032174	Hardwood Forest Soil	MATHLVIDADGHCYEPDNDLAKWMPAEFAKRAPNRVTDSSGYSHLMI
Ga0335084_101094984	3300033004	Soil	MATNLVVDADGHCYEPDSDLAKWMPKEHAHLAPNRVTDSSGYSHLMIEGRLAGRRRWGGGPDRGAVFADHIERSRPGMTDA
Ga0310810_113424151	3300033412	Soil	MANLVIDADGHCYEPDNELAKWMPKELAHLAPNRVSDSSGYSHLMIEGRLSSRRRWGGGADRGEVFAP
Ga0316620_103062091	3300033480	Soil	MARDLVIDADGHCYEPDSELAKWMPKELAHLAPNRVSDSSGYSHLMIEGR
Ga0364931_0184948_506_676	3300034176	Sediment	MATNLVIDADGHCYEPDIGLVKWLPKEYAHLAPNRVTDSSGYSHLMIEGRLAGRRRW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters