Metagenome / Metatranscriptome Family F103700

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103700
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	58 residues
Representative Sequence	VTLNGRMTVTTAVACVLTSTVLLPLFTTILWFVIGAGAVIAVAATGALTRLRTLPV
Number of Associated Samples	89
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.06 %
% of genes near scaffold ends (potentially truncated)	98.02 %
% of genes from short scaffolds (< 2000 bps)	94.06 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.475 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.762 % of family members)
Environment Ontology (ENVO)	Unclassified (22.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.574 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01882	DUF58	45.54
PF13559	DUF4129	3.96
PF07726	AAA_3	1.98
PF02653	BPD_transp_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	45.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.50 %
Unclassified	root	N/A	47.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.50 %
Unclassified	root	N/A	47.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	45.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	34.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	21.78 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	21.78 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.99 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	21.78 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.99 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005178\|Ga0066688_10520458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	765	Open in IMG/M
3300005434\|Ga0070709_10445577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	974	Open in IMG/M
3300005434\|Ga0070709_11282243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300005439\|Ga0070711_100170249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1659	Open in IMG/M
3300005439\|Ga0070711_101199096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	656	Open in IMG/M
3300005458\|Ga0070681_10772253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	878	Open in IMG/M
3300005575\|Ga0066702_10792352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300005576\|Ga0066708_10634523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300005610\|Ga0070763_10719790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	586	Open in IMG/M
3300005841\|Ga0068863_101138053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	785	Open in IMG/M
3300005842\|Ga0068858_102387155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300006028\|Ga0070717_12114092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300006174\|Ga0075014_100807183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300006176\|Ga0070765_101016535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	784	Open in IMG/M
3300006354\|Ga0075021_11036700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300009090\|Ga0099827_10290926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1380	Open in IMG/M
3300009520\|Ga0116214_1169157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	817	Open in IMG/M
3300010048\|Ga0126373_10332344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1526	Open in IMG/M
3300010301\|Ga0134070_10123524	Not Available	915	Open in IMG/M
3300010360\|Ga0126372_11776548	Not Available	659	Open in IMG/M
3300010362\|Ga0126377_10160079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2123	Open in IMG/M
3300010376\|Ga0126381_103398025	Not Available	627	Open in IMG/M
3300010865\|Ga0126346_1392083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	805	Open in IMG/M
3300011269\|Ga0137392_10455614	Not Available	1062	Open in IMG/M
3300012189\|Ga0137388_10267363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1561	Open in IMG/M
3300012509\|Ga0157334_1069703	Not Available	526	Open in IMG/M
3300012957\|Ga0164303_11497197	Not Available	510	Open in IMG/M
3300012984\|Ga0164309_11253834	Not Available	625	Open in IMG/M
3300013105\|Ga0157369_11751363	Not Available	631	Open in IMG/M
3300014164\|Ga0181532_10286633	Not Available	936	Open in IMG/M
3300014968\|Ga0157379_10224854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1701	Open in IMG/M
3300016294\|Ga0182041_11217635	Not Available	687	Open in IMG/M
3300016371\|Ga0182034_10390284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1140	Open in IMG/M
3300017924\|Ga0187820_1153551	Not Available	695	Open in IMG/M
3300017937\|Ga0187809_10328212	Not Available	569	Open in IMG/M
3300017959\|Ga0187779_10744450	Not Available	665	Open in IMG/M
3300017959\|Ga0187779_11378008	Not Available	501	Open in IMG/M
3300017972\|Ga0187781_10421939	Not Available	954	Open in IMG/M
3300017972\|Ga0187781_10470079	Not Available	901	Open in IMG/M
3300017994\|Ga0187822_10056534	Not Available	1115	Open in IMG/M
3300018044\|Ga0187890_10450530	Not Available	723	Open in IMG/M
3300018431\|Ga0066655_10779387	Not Available	650	Open in IMG/M
3300020579\|Ga0210407_10215671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1493	Open in IMG/M
3300020581\|Ga0210399_10017742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5626	Open in IMG/M
3300020582\|Ga0210395_10993880	Not Available	621	Open in IMG/M
3300021088\|Ga0210404_10613540	Not Available	618	Open in IMG/M
3300021171\|Ga0210405_10100480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2282	Open in IMG/M
3300021362\|Ga0213882_10304686	Not Available	665	Open in IMG/M
3300021445\|Ga0182009_10754827	Not Available	530	Open in IMG/M
3300021478\|Ga0210402_11135983	Not Available	708	Open in IMG/M
3300024179\|Ga0247695_1038382	Not Available	688	Open in IMG/M
3300024310\|Ga0247681_1014967	Not Available	1086	Open in IMG/M
3300025916\|Ga0207663_11261337	Not Available	595	Open in IMG/M
3300025920\|Ga0207649_10890991	Not Available	697	Open in IMG/M
3300025922\|Ga0207646_11087648	Not Available	704	Open in IMG/M
3300025935\|Ga0207709_11288338	Not Available	604	Open in IMG/M
3300025981\|Ga0207640_10264360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1342	Open in IMG/M
3300026527\|Ga0209059_1067898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1536	Open in IMG/M
3300027505\|Ga0209218_1091371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	634	Open in IMG/M
3300027765\|Ga0209073_10385296	Not Available	572	Open in IMG/M
3300027775\|Ga0209177_10147811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	794	Open in IMG/M
3300027882\|Ga0209590_10212241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1226	Open in IMG/M
3300027882\|Ga0209590_10409695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	876	Open in IMG/M
3300028718\|Ga0307307_10047728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1248	Open in IMG/M
3300028885\|Ga0307304_10053201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1505	Open in IMG/M
3300030007\|Ga0311338_10837876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	911	Open in IMG/M
3300030659\|Ga0316363_10427111	Not Available	512	Open in IMG/M
3300030706\|Ga0310039_10200742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	785	Open in IMG/M
3300030738\|Ga0265462_11800550	Not Available	587	Open in IMG/M
3300031680\|Ga0318574_10415960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	786	Open in IMG/M
3300031723\|Ga0318493_10449870	Not Available	708	Open in IMG/M
3300031795\|Ga0318557_10430931	Not Available	606	Open in IMG/M
3300031798\|Ga0318523_10424358	Not Available	660	Open in IMG/M
3300031823\|Ga0307478_10904825	Not Available	738	Open in IMG/M
3300031833\|Ga0310917_10244704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1206	Open in IMG/M
3300031833\|Ga0310917_10447912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	878	Open in IMG/M
3300031846\|Ga0318512_10277042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	831	Open in IMG/M
3300031912\|Ga0306921_10389944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1626	Open in IMG/M
3300031954\|Ga0306926_11455638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	792	Open in IMG/M
3300032001\|Ga0306922_11278276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300032009\|Ga0318563_10754295	Not Available	522	Open in IMG/M
3300032025\|Ga0318507_10383377	Not Available	612	Open in IMG/M
3300032041\|Ga0318549_10245319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	806	Open in IMG/M
3300032041\|Ga0318549_10526563	Not Available	531	Open in IMG/M
3300032044\|Ga0318558_10492375	Not Available	612	Open in IMG/M
3300032054\|Ga0318570_10035337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2009	Open in IMG/M
3300032055\|Ga0318575_10057615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1798	Open in IMG/M
3300032089\|Ga0318525_10051480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2045	Open in IMG/M
3300032160\|Ga0311301_12111127	Not Available	651	Open in IMG/M
3300032261\|Ga0306920_100654477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1551	Open in IMG/M
3300032261\|Ga0306920_102976842	Not Available	640	Open in IMG/M
3300032783\|Ga0335079_10961959	Not Available	873	Open in IMG/M
3300032783\|Ga0335079_11031115	Not Available	837	Open in IMG/M
3300032783\|Ga0335079_11568205	Not Available	648	Open in IMG/M
3300032896\|Ga0335075_10442432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1359	Open in IMG/M
3300032897\|Ga0335071_10341474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1450	Open in IMG/M
3300032954\|Ga0335083_10126215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2462	Open in IMG/M
3300033158\|Ga0335077_10271774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1868	Open in IMG/M
3300033158\|Ga0335077_11473340	Not Available	653	Open in IMG/M
3300033158\|Ga0335077_12066914	Not Available	527	Open in IMG/M
3300034820\|Ga0373959_0027175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1135	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.08%
Host-Associated	Host-Associated	7.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.15%
Plants	Host-Associated → Plants	7.92%
Aquatic	Environmental → Aquatic	6.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.17%
Freshwater	Environmental → Aquatic → Freshwater	4.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.97%
Sediment	Environmental → Aquatic → Sediment	1.98%
Peat	Environmental → Terrestrial → Peat	0.99%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.87%
Loam	Environmental → Terrestrial → Soil → Loam	10.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.99%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.99%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066688_105204581	3300005178	Soil	MTLNGRMTVTTAVACVLVSTVLLPLFTNALWFVIGAGAVIAVAGTGALTR
Ga0070709_104455772	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTVNVRMTVVTGVACLLAAIDLLPLFDDTLWFVIAIGAVIVVGA
Ga0070709_112822431	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTVNVRMTVVTGVACLLAAIDLLPLFDDTLWFVIAIGAVIVVGATGTLTRLR
Ga0070711_1001702493	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTQNARMTVATAVACVLASAGLFPLFTSSLWFVIGAGAVIAVAGAGALTRLRTL
Ga0070711_1011990962	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTVNVRMTVVTGVACLLAAIDLLPLFDDTLWFVIAIGAVIVVGATGTLTRLRPLPSE
Ga0070681_107722532	3300005458	Corn Rhizosphere	VTVNVRMTVVTGVACLLAAIDLLPLFDDTLWFVIAIGAVIVVAATGTL
Ga0066702_107923521	3300005575	Soil	VTVNVRMTVTTAVACVLASIGLLPLFSDSLWFVIAIGAVAVIAGTGMLTRLRPLPAPACLLAGVAAL
Ga0066708_106345232	3300005576	Soil	MTPNSRMTVTTAVACVLVSTVLLPLFTNALWFVIGAGAVIAVAGTGALTRLRTLP
Ga0070763_107197901	3300005610	Soil	VTLNGRMTVTAAIAVVLASTVMYPLFTNSVWFAISIGAVIAVAGAGALSRLRFLPVSV
Ga0068863_1011380531	3300005841	Switchgrass Rhizosphere	VTVNVRMTVVTGVACLLAAIDLLPLFDDTLWFVIAIGAVIVIGATGTLTRLR
Ga0068858_1023871551	3300005842	Switchgrass Rhizosphere	MTLNSRMTVTTAVACVLVSSVLLPLFTNTLWFVIAAGAVIAVAGTGALTRLRTLPV
Ga0070717_121140921	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTVNVRMTVVTGVACLLAAIDLLPLFDDTLWFVIAIGAVIVVGATGTLTRLRPLPS
Ga0075014_1008071831	3300006174	Watersheds	VTLNGRMTVTTAVACVLASTALLPLFTSSLWFAIAGGAVITVAAAGALTRLRTLP
Ga0070765_1010165351	3300006176	Soil	VTLNGRMTVVTAVACVLASTALLPLFSDSLWFAIAAGAVIVVAAAGALTR
Ga0075021_110367002	3300006354	Watersheds	MTLNGRMTVATAVACVLTSTVLLPFFISIEWFVIGVGAVIAVAATGALTR
Ga0099827_102909262	3300009090	Vadose Zone Soil	MTVTAAVACVWVSTVLYPVFTDSVWFFVATGGVIAVASTGALTRLRTLPVAA
Ga0116214_11691571	3300009520	Peatlands Soil	VTLNGRMTVTAAVACVLSSTALLPLFSYTLWFAIAAGGVIVVAATGALTRLRTLP
Ga0126373_103323441	3300010048	Tropical Forest Soil	VTLNGRMTVTTAVACVLTSTVLLPLFTTTLWFVIGAGAVIAVAATGALTRL
Ga0134070_101235241	3300010301	Grasslands Soil	MTLNGRMTVTTAVACVLVSTVLLPLFIDILWFVIGAGAVIAVAGTGALTRLRTLPVSVCLAAGLVG
Ga0126372_117765481	3300010360	Tropical Forest Soil	MTLNSRMTVTTAVACVLVSSVLAPLFIDTLWFVIGAGAVIAVAGTGALTRLRMLPVSVCLAAGLAGLLLYL
Ga0126377_101600791	3300010362	Tropical Forest Soil	MTLNSRMTVTTAVACVLVSSVLAPLFIDTLWFVIGAGAVIAVAGTGALTRLRTLPVSVCLAAGLVGLL
Ga0126381_1033980252	3300010376	Tropical Forest Soil	MTLNGRMTVTTAVACVLTSTVLMPLFTNTLWFVIAAGAVIAVAGTGALTRLRTLPVSACLAASLAGLLL
Ga0126346_13920831	3300010865	Boreal Forest Soil	MTVNVRMTVTTAVACVLASIDLLPLFGDSLWFVIAVGAVAVVAGAGLLTRLRPLPAPA
Ga0137392_104556141	3300011269	Vadose Zone Soil	VTLNGRMTVTTAVACVLASTVLLPLFSKSLWFAIATGGVIAVAATGALTRLRTLPV
Ga0137388_102673631	3300012189	Vadose Zone Soil	MTQNARMTVTTAVACVLASTALLPLYQTGLWFFIAAGAVITVASAGALT
Ga0157334_10697032	3300012509	Soil	MTLNSRMTATTAVACVLVSTVLLPLFIDILWFVIGVGAVIAVAGTGALTRLRTLPV*
Ga0164303_114971971	3300012957	Soil	MTLNTRMTATTAVACVLVSTVLLPLFSDILWFVIGAGAVIAVAATGALTRLRTLPVSVCLAAALVGL
Ga0164309_112538341	3300012984	Soil	MTLNGRMTVTTAVACVLVSSVLLPLFTNTLWFVIGVGAVIAVAGTGALTRLRTLPVSVCLAASV
Ga0157369_117513632	3300013105	Corn Rhizosphere	MTLNTRMTVVTAVACVLVSTVLLPLFSDTLWFVIGAGAVIAVAGTGALTRLRTLPVSVCLAAG
Ga0181532_102866332	3300014164	Bog	MTVTTAVACALASTALLPLFGSSLWFAIAGGAVITVAAAGALTRLRTLPVLVCLAGS
Ga0157379_102248541	3300014968	Switchgrass Rhizosphere	MTLNTRMTATTAVACVLVSTVLLPLFSDILWFVIAAGAVIAVAGTGALTRLRTLPVSVCLAAGL
Ga0182041_112176352	3300016294	Soil	VTLNGRMTVTTAVACVLTSTVLLPLFTTILWFVIGAGAVIAVAATGALT
Ga0182034_103902842	3300016371	Soil	MTLNGRMTVATAVACVLTSTVLLPLFTNTLWFVIGTGAVIAVAATGALTRL
Ga0187820_11535512	3300017924	Freshwater Sediment	VTLNGRMTVTAAVACVLSSTALLPLFSNSLWFAIAAGGVIVVAATGALT
Ga0187809_103282122	3300017937	Freshwater Sediment	VTLNSRMTVTTAVACVLASTALLPLFTDSLWFAIAAGAVIVVAATGALTRLRTLPPAAC
Ga0187779_107444502	3300017959	Tropical Peatland	VTLNGRMTITAAVACVLTAIALMPLFNNSLWFVIATGAVIAVAATGALTRLRTLPVPACLAASLA
Ga0187779_113780081	3300017959	Tropical Peatland	VTPNGRMTVTAAVACVLVSTVLLPLFSNSLWFAIATGAVIAVAGTGALTRLRTLP
Ga0187781_104219391	3300017972	Tropical Peatland	MTADRRMTVTVAVACVFTSTSLYPLFLDTQWFFLGAGAVIVVAASGTLTRLRTLPVVACLAIS
Ga0187781_104700792	3300017972	Tropical Peatland	VTLNGRMTVTTAVACVLSSTALLPLFINALWFAAAAGGVAVVAATGALTRLRTLPPAVCL
Ga0187822_100565341	3300017994	Freshwater Sediment	VTVNVRMTVVTAVACLLAAIDLLPLFDDTLWFVIAIGAVIVVAATGTLTRLRP
Ga0187890_104505302	3300018044	Peatland	VTLNGRMTVTTAVACMLVSTVLYPVFTDSLWFVIATGGVVVVAAAGALTRLRPLPAPACL
Ga0066655_107793872	3300018431	Grasslands Soil	MTLNSRMTVTTAVACVLVSTVLLPLFIDILWFVIASGAVIAVAGAGALTRLRTLPVSVCLAAGLAGLPLYLNLTFQV
Ga0210407_102156711	3300020579	Soil	VTLNGRMTVTTAVACVLASTALLPLFSDSLWFFIGAGAVITVAATGALTRLR
Ga0210399_100177427	3300020581	Soil	MTLNGRMTVTTAVACVLVSSVLLPLFTNTLWFVIGVGAVIAVAGTGALTRLRTLPVSVCLAASVVGLL
Ga0210395_109938801	3300020582	Soil	VTLNGRMTVTTAVACVLASTALLPLFSNSLWFAIAVGGVIVVAAAGALT
Ga0210404_106135402	3300021088	Soil	MTLNGRMTVTTAVACVLVSSVLLPLFTNTLWFVIGVGAVIAVAGTGALTRLRTLPVSVCLAASVVG
Ga0210405_101004803	3300021171	Soil	VTLNGRMTVTTAVACVLASTALLPLFSDSLWFFIGAGAVITVAATGALTRLRTLPVPACLAASLAG
Ga0213882_103046862	3300021362	Exposed Rock	VTLNGRMTVTTAVACVLAATALLPLFSNSLWFVIAIGGVIAVAGAGALS
Ga0182009_107548271	3300021445	Soil	VTVNVRMTVVTAVACLLAAIGLLPLFEDTLWFLIAIGAVIAVAATGTLTRLR
Ga0210402_111359832	3300021478	Soil	MTLNGRMTVTTAVACALVSSVLLPLFINTLWFVIGAGAVIAVAGTGALTRLRTLPV
Ga0247695_10383822	3300024179	Soil	MTLNTRMTATTAVACVLVSTVLLPLFSDILWFVIAAGAVIAVAGTGALTRLRTLPVSVC
Ga0247681_10149671	3300024310	Soil	MTLNTRMTATTAVACVLVSTVLLPLFSDILWFVIAAGAVIAVAGTGALTRLRTLPVSVCLAAGLVGL
Ga0207663_112613372	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTLNTRMTATTAVACVLVSTVLLPLFSDILWFVIGAGAVIAVAGTGALTRLRTLPVSVCLAAGLVG
Ga0207649_108909911	3300025920	Corn Rhizosphere	MTLNTRMTATTAVACVLVSTVLLPLFSDILWFVIAAGAVIAVAGTGALTRLRTLPVS
Ga0207646_110876482	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTLNGRMTVTTAVACVLVSSVLLALFTNTLWFVIAAGAVIAVAGTGALTRLRTLPVSVCLAATVV
Ga0207709_112883382	3300025935	Miscanthus Rhizosphere	MTLNTRMTATTAVACVLVSTVLLPLFSDILWFVIGAGAVIAVAGTGALTRLRTLPVSVCL
Ga0207640_102643602	3300025981	Corn Rhizosphere	MTLNTRMTATTAVACVLVSTVLLPLFSDTLWFVIGAGAVIAVAGTGALTRL
Ga0209059_10678981	3300026527	Soil	MTLNGRMTVTTAVACVLVSTVLLPLFTNALWFVIGAGAVIAVAGTGALTRLRTLPVSVCLAAGV
Ga0209218_10913711	3300027505	Forest Soil	VTLNRRMTVTAAAACVLVSTVLYTVFSDSLWFFIGAGAVIAVAATGALTR
Ga0209073_103852962	3300027765	Agricultural Soil	VTVNVRMTVVTAVACLLAAIDLLPLFDDTLWFVIAIGAVIVVAAAGTLTRLRPLP
Ga0209177_101478112	3300027775	Agricultural Soil	MTLNGRMTVTTAVACVLVSSVLLPLFTNTLWFIIGVGAVIAVAGTGALTRLRTLPVSVCLAAG
Ga0209590_102122411	3300027882	Vadose Zone Soil	VTLNRRMTVTAAVACVWVSTVLYPVFTDSVWFFVATGGVIAVASTGALTRLRTLPVAACLAAGV
Ga0209590_104096951	3300027882	Vadose Zone Soil	MTLNGRMTVTTAVACVLTSTVLLPLFTSTLWFVIGAGAVIAVAATGALTRLRTLPVPACLAAS
Ga0307307_100477282	3300028718	Soil	MTLNTRMTVTTAVACVLVSTVLSPLFIDTLWFVIGAGAVIAVAGTGALTRLRTLPVSVCLAA
Ga0307304_100532012	3300028885	Soil	MTLNTRMTVTTAVACVLVSTVLSPLFIDTLWFVIGAGAVIAVAGTGALTRLR
Ga0311338_108378762	3300030007	Palsa	VTPNARMTVTAAIAVVLASTVLYPLFTGSMFLAISMGAVIAVAGTGALTRLRSLPVPVCVLAT
Ga0316363_104271112	3300030659	Peatlands Soil	VTLSGRMTVTTAVACLLASTALLPLFSSSLWFAIAGGAVITVAATGALTRLRTLPAA
Ga0310039_102007421	3300030706	Peatlands Soil	VTLTARMTVTTAVACVLASTALLPLFSGSLWFAVAGGAVITVAGAGALTRLRPLPAPAC
Ga0265462_118005502	3300030738	Soil	VTLSGRMTVTAAVAVVLSSTVLYPVFTDSLWFAAAIGAVAAAALTGALTRLRTLPVAVNKVKRSKRKK
Ga0318574_104159601	3300031680	Soil	MTLNGRMTVTTAVACVLTSTVLLPLFTNTLWFVIGTGAVIAVAATGALT
Ga0318493_104498701	3300031723	Soil	MTPNGRMTVTAAVACVLTSTVLLPLFISTLWFVIGAGAVIAVAGTGALTRLRTLPVSACLAASLAGLLL
Ga0318557_104309312	3300031795	Soil	MTLNARMTVTTAVACVLTSTVLLPLFTNTLWFVIGVGAVITAAATGALTRLRTLPVSV
Ga0318523_104243582	3300031798	Soil	MTITAAVACMLASTALFPLFISPLWFAVSAGAVIAAAGTGTLTRLRTLPASVCLGVGLLGLLWYLNL
Ga0307478_109048251	3300031823	Hardwood Forest Soil	VTLNRRMTVTAAAACVLVSTVLYTVFSDSLWFFIGAGAVITVAATGALTRLRTLPVPACLAASLAG
Ga0310917_102447042	3300031833	Soil	MTLNARMTVTTAVACVLTSTVLLPLFTNTLWFVIGVGAVITAAATGALTRLRTLPVSAC
Ga0310917_104479122	3300031833	Soil	MTLNGRMTVATAVACVLTSTVLLPLFTNTLWFVIGTGAVIAVAATGALTRLRALPVSVCLAA
Ga0318512_102770422	3300031846	Soil	VTLNGRMTVTTAVACVLTSTVLLPLFTTILWFVIGAGAVIAVAATGALTRPRTLPVSVCLAAS
Ga0306921_103899443	3300031912	Soil	MTLNGRMTVATAVACVLTSTVLLPLFTNTLWFVIGTGAVIAVAATGALTR
Ga0306926_114556381	3300031954	Soil	MTPNGRMTVTAAVACVLTSTVLLPLFISTLWFVIGAGAVIVVAGTGALTRLRTLPVSACLAA
Ga0306922_112782761	3300032001	Soil	MTLNGRMTVATAVACVLTSTVLLPLFTNTLWFVIGTGAVIAVAATGALTRQRTLPVSVCLAASLAG
Ga0318563_107542952	3300032009	Soil	VTPNGRMTVTAAVACVLAATALMPLFSNSLWFVIATGAVIVVAATGALTRL
Ga0318507_103833772	3300032025	Soil	VTLNGRMTVTTAVACVLTSTVLLPLFTTILWFVIGAGAVIAVAATGALTRPRTLPVSVCL
Ga0318549_102453192	3300032041	Soil	VTLNGRMTVTTAVACVLTSTVLLPLFTTILWFVIGAGAVIAVAATGAQTDTG
Ga0318549_105265631	3300032041	Soil	MTLNARMTVTTAVACVLTSTVLLPLFTNTLWFVIGVGAVITAAATGALT
Ga0318558_104923752	3300032044	Soil	VTLNGRMTVTTAVACVLTSTVLLPLFTTILWFVIGAGAVIAVAATGALTRLRTLPV
Ga0318570_100353373	3300032054	Soil	VTLNGRMTVTTAVACVLTSTVLLPLFTTILWFVIGAGAVIAVAATGALTR
Ga0318575_100576153	3300032055	Soil	VTLNGRMTVTTAVACVLTSTVLLPLFTTILWFVIGAGAVIAVAATGALTRLR
Ga0318525_100514803	3300032089	Soil	VTLNGRMTVTTAVACVLASTALLPLFINALWFIIAAGGVAVVAATGALTRLRILPPAACLAAGVAG
Ga0311301_121111272	3300032160	Peatlands Soil	VTLNRRMTVTTAMACMLAATALLPLFTSSLWFAVAGGAVIVVAAAGTLTRLRTLPTLVCLAGSIAGLLLY
Ga0306920_1006544771	3300032261	Soil	VTPNGRMTVTAAVACVLTSTVLLPLFISTLWFVIGAGAVIVVAGTGALTRLRTL
Ga0306920_1029768422	3300032261	Soil	VTPNGRMTVTAAVACLLAATALMPLFSNSLWFVIATGAVIVVAATGALTRLRTLPVPACLAA
Ga0335079_109619592	3300032783	Soil	MTLNARMTVTTAVACVLTSTVLLPLFTNTLWFVIGVGAVITATATGALTRLRTLPVSVCLAA
Ga0335079_110311151	3300032783	Soil	VTVNVRMTVTTAVACVLASIDLLPLFDDSLWFVIAIGAVTAVAATGALTRL
Ga0335079_115682052	3300032783	Soil	MTLNGRMTVTTAVACVLTSTVLLPLFTNTLWFVIGAGAVTAVAATGALTRLRTLPVSVCL
Ga0335075_104424322	3300032896	Soil	VTANTRMTVTTAVACLLAAIDLLPLFDDSLWYIIAIGAVIVVAAAGTLTRLRPLPSEACLAIGIVALIL
Ga0335071_103414741	3300032897	Soil	MTLNARMTVTTAVACVLTSTVLLPLFTNTLWFVIGVGAVITAAATGALTRLRTLPVSVC
Ga0335083_101262151	3300032954	Soil	MTLNGRMTVTTAVACVLTSTVLLPLFTSVLWFVIGAGAVMAVAATGALTRLRTLPV
Ga0335077_102717743	3300033158	Soil	MTLNGRMTVATAVACVLTSTVLLPLFLSIEWFVIGVGAVIAVAATGALTRLCTLPVSVC
Ga0335077_114733401	3300033158	Soil	MTQHTRMTVTTAMACVLASTVLFPLFIHSLWFFVGAGAVLAVAGAGALTRLRTL
Ga0335077_120669142	3300033158	Soil	MPNGRMTVTTAVACVLASTALLPLFTSALWIIIAAGAVLAVAGTGALTRLRALP
Ga0373959_0027175_941_1135	3300034820	Rhizosphere Soil	MTLNTRMTATTAVACVLVSTVLLPLFSDILWFVIGAGAVIAVAATGALTRLRTLPVSVCLAAALV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences