Metagenome / Metatranscriptome Family F103671

Basic Information
Family ID	F103671
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	49 residues
Representative Sequence	VSPPASTSFSFEPLFLVLAAAAVYGYVRLARTVERPSSGRATLFGL
Number of Associated Samples	96
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.00 %
% of genes near scaffold ends (potentially truncated)	98.02 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (95.050 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.772 % of family members)
Environment Ontology (ENVO)	Unclassified (29.703 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.416 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.89% β-sheet: 0.00% Coil/Unstructured: 58.11%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09678	Caa3_CtaG	90.10
PF04879	Molybdop_Fe4S4	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.05 %
Unclassified	root	N/A	4.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.05 %
Unclassified	root	N/A	4.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.05 %
Unclassified	root	N/A	4.95 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.12 %
Unclassified	root	N/A	4.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.12 %
Unclassified	root	N/A	4.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.25 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9.90 %
Unclassified	root	N/A	4.95 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	75.25 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8.91 %
Unclassified	root	N/A	4.95 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	75.25 %
Unclassified	root	N/A	4.95 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	75.25 %
Unclassified	root	N/A	4.95 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	75.25 %
Unclassified	root	N/A	4.95 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	75.25 %
Unclassified	root	N/A	4.95 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0326795	Not Available	550	Open in IMG/M
3300001686\|C688J18823_10759011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300004081\|Ga0063454_100870661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300004114\|Ga0062593_100708031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	984	Open in IMG/M
3300004157\|Ga0062590_100415766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300005093\|Ga0062594_103398696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300005172\|Ga0066683_10851425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	526	Open in IMG/M
3300005329\|Ga0070683_100116924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2518	Open in IMG/M
3300005332\|Ga0066388_101652629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1130	Open in IMG/M
3300005341\|Ga0070691_10367021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300005436\|Ga0070713_101204511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300005456\|Ga0070678_100354354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1263	Open in IMG/M
3300005457\|Ga0070662_100613458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300005459\|Ga0068867_100156082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1796	Open in IMG/M
3300005545\|Ga0070695_101772961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005553\|Ga0066695_10467933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300005559\|Ga0066700_10658121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300005561\|Ga0066699_10029844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3141	Open in IMG/M
3300005598\|Ga0066706_10640408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300005713\|Ga0066905_101293117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300005843\|Ga0068860_102259515	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005844\|Ga0068862_100257516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1592	Open in IMG/M
3300006031\|Ga0066651_10084190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1570	Open in IMG/M
3300006175\|Ga0070712_100465217	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300006605\|Ga0074057_11276524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300006755\|Ga0079222_10605078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300006852\|Ga0075433_10689338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300006853\|Ga0075420_101916493	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006904\|Ga0075424_102633778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300006914\|Ga0075436_100899921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300006953\|Ga0074063_12981267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300006969\|Ga0075419_10542004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300009098\|Ga0105245_11412367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300009148\|Ga0105243_10276894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1509	Open in IMG/M
3300009162\|Ga0075423_12918153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300009177\|Ga0105248_13025044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300010047\|Ga0126382_10608664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	900	Open in IMG/M
3300010303\|Ga0134082_10316341	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300010321\|Ga0134067_10196795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300010359\|Ga0126376_11278010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300010375\|Ga0105239_12813639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300010376\|Ga0126381_104336433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300010396\|Ga0134126_10106278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3444	Open in IMG/M
3300010396\|Ga0134126_10283353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1950	Open in IMG/M
3300010403\|Ga0134123_12617962	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300011003\|Ga0138514_100037186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300011107\|Ga0151490_1376886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300012198\|Ga0137364_10695392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300012201\|Ga0137365_11114043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300012201\|Ga0137365_11159856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300012211\|Ga0137377_10970230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300012356\|Ga0137371_10666861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300012360\|Ga0137375_10486908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1053	Open in IMG/M
3300012505\|Ga0157339_1067963	Not Available	508	Open in IMG/M
3300012911\|Ga0157301_10195895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300012913\|Ga0157298_10244599	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	604	Open in IMG/M
3300012948\|Ga0126375_10832902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300012951\|Ga0164300_10400684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300012977\|Ga0134087_10628011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300012984\|Ga0164309_11279732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300012985\|Ga0164308_11277279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300012989\|Ga0164305_11596062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300013306\|Ga0163162_10816209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1049	Open in IMG/M
3300015077\|Ga0173483_10414081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300015077\|Ga0173483_10478117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300015357\|Ga0134072_10384798	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300017947\|Ga0187785_10166473	Not Available	937	Open in IMG/M
3300018482\|Ga0066669_11722828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300021560\|Ga0126371_12525349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300022756\|Ga0222622_10246490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1208	Open in IMG/M
3300022901\|Ga0247788_1047594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300025899\|Ga0207642_10671594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300025931\|Ga0207644_11274821	Not Available	618	Open in IMG/M
3300025945\|Ga0207679_10979992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300025960\|Ga0207651_10709052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300025960\|Ga0207651_11386134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300027725\|Ga0209178_1215706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300027787\|Ga0209074_10429628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300028704\|Ga0307321_1032198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300028709\|Ga0307279_10100105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300028710\|Ga0307322_10071690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300028715\|Ga0307313_10000123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	12239	Open in IMG/M
3300028721\|Ga0307315_10209073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300028744\|Ga0307318_10119026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300028768\|Ga0307280_10009045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2665	Open in IMG/M
3300028778\|Ga0307288_10079029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1173	Open in IMG/M
3300028784\|Ga0307282_10393278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300028807\|Ga0307305_10175915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300028811\|Ga0307292_10329700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300028819\|Ga0307296_10032692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2745	Open in IMG/M
3300028824\|Ga0307310_10475574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300028878\|Ga0307278_10016371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3439	Open in IMG/M
3300028884\|Ga0307308_10175960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1025	Open in IMG/M
3300031938\|Ga0308175_100295032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1650	Open in IMG/M
3300032013\|Ga0310906_11434741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300032074\|Ga0308173_11577030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300032126\|Ga0307415_100644104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	949	Open in IMG/M
3300033004\|Ga0335084_11195730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300033158\|Ga0335077_11430480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300033433\|Ga0326726_11776933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.23%
Host-Associated	Host-Associated	22.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.24%
Plants	Host-Associated → Plants	22.77%
Aquatic	Environmental → Aquatic	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.93%
Sediment	Environmental → Aquatic → Sediment	0.99%
Peat	Environmental → Terrestrial → Peat	0.99%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.89%
Loam	Environmental → Terrestrial → Soil → Loam	8.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.99%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.95%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103671

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_03267953	3300000033	Soil	VTAPASTSFSFEPLFLVLAAAAVYGYVRLARNVDRPSGWRATL
C688J18823_107590111	3300001686	Soil	VNPPGSTSFSFEWLFLILCALAVYGYVRLARGVEKPSPGRATLFALG
Ga0063454_1008706611	3300004081	Soil	VNAPAPTSFSFEWLFLILCALAVYGYVRLARRVDRPWAGRMTLFALGIALIAIPLNSPLE
Ga0062593_1007080312	3300004114	Soil	VSTPAATSFSFEPLFLVLCAAAVYAYVRMARTVERPGWWRATLFGTGIVLIALSLNS
Ga0062590_1004157662	3300004157	Soil	VTAPASTSFSFEPLFLVLAAVAVYGYVRLAREVDRPSPWRATLFGLGILLVA
Ga0062594_1033986961	3300005093	Soil	VSIPAPSSFSFEPLFLALAVAGGYGYWRLAKTVERPSTFRACLFALGLLLVAVP
Ga0066683_108514251	3300005172	Soil	VNPPASTSFSFEWIFLVLGAAAVVGYVGLARAVERPSRGRAALFGLGVALVVLSLNS
Ga0070683_1001169244	3300005329	Corn Rhizosphere	VSHPAATSFSFEPLFLVLAAAAVCGYVRLARTVERPSAWRATLFGLGI
Ga0066388_1016526291	3300005332	Tropical Forest Soil	VTAPASTSFSFEPLFIVLAAAGAYGYLRLARTVERPPWWRTTLFALGILLVAVPLNSPLE
Ga0070691_103670211	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MLSPPASTSFSFEWIFLVLCLAAVYGYVRLARTEHPPRGR
Ga0070713_1012045112	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTVPSSTSFSFEPLFLVLAAAAVYGYVRLARTVERPSGWRATLFGLGVAL
Ga0070678_1003543541	3300005456	Miscanthus Rhizosphere	VSPPASTSFSFEPLFLVLAAGAVYGYVRLARTVERPSGWRATLFGLGVALVAVS
Ga0070662_1006134581	3300005457	Corn Rhizosphere	VSAPSASSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAWRATLFGLGIALIAI
Ga0068867_1001560821	3300005459	Miscanthus Rhizosphere	VSPPASTSFSFEPLFLVLAAGAVYGYVRLARTVERPSGWRATLFGLGVALVAVSLNS
Ga0070695_1017729611	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPASTSFSFEPLFLVLAAGAVYGYVRLARTVERPSGGRATLFGLGVALVAVSLNSPLE
Ga0066695_104679331	3300005553	Soil	VILAAPSASSFSFEWIFLILCAAAVYGYVRLARTVERPTNGRAVLFGLGIAL
Ga0066700_106581212	3300005559	Soil	LNPPASYSFSFEPLFLVLAVAAGYGYFRLARSVERPSRAR
Ga0066699_100298445	3300005561	Soil	VNPPASTSFSFEWAFLVLSAGAVWGYVRLARGAERPGPGRITLFSLGIALVAFSLNSPLETIA
Ga0066706_106404082	3300005598	Soil	VNPPASTSFSFEWLFLVLGAAAVVGYVRMARTVERPSRGRAALFGLGV
Ga0066905_1012931171	3300005713	Tropical Forest Soil	VTAPASTSFTFEPLFIVLAAAGAYGYVRLARTVERPSWWRATLFALGILLVAVPLN
Ga0068860_1022595152	3300005843	Switchgrass Rhizosphere	VSAPSASSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAWRATLFGVGIALIAISLN
Ga0068862_1002575161	3300005844	Switchgrass Rhizosphere	VSPPASTSFSFEPLFLVLAAGAVYGYVRLARTVERPSGWRATLFG
Ga0066651_100841901	3300006031	Soil	VTPASTSFSFEPAFLVLGAAAVYGYVRLARTVERPSVGRATLFGLGV
Ga0070712_1004652171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSPPASTSFSFEPLFLVLAAGAVYGYVRLARTVERP
Ga0074057_112765241	3300006605	Soil	VSTPASTSFSFEPLFLVLAAGAVYGYVRLARTVERPTGW
Ga0079222_106050782	3300006755	Agricultural Soil	VSAPASTSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAGRVTLFGLGVALVAVPLNSPLE
Ga0075433_106893381	3300006852	Populus Rhizosphere	VSIQAPSSFSFEPLFLALAVAGGYGYWRLAKTVERPSTFRACLFSLGLLLVAVP
Ga0075420_1019164931	3300006853	Populus Rhizosphere	VTAPASTSFSFEPLFIVLSAAGVYGYLRLARTVERPPW
Ga0075424_1026337782	3300006904	Populus Rhizosphere	VSAPASTSFSFEPLFLVLAAAAVFGYVRLARTVERPSAWRATLFGIGVLLVAVSL
Ga0075436_1008999212	3300006914	Populus Rhizosphere	VNAPASTSFSFEPLFLVLAAVAVYGYVRLARTVERPSGWRMTLFGLGV
Ga0074063_129812672	3300006953	Soil	VSTPASTSFSFEPLFLVLAAGAVYGYVRLARTVERPSGWRA
Ga0075419_105420041	3300006969	Populus Rhizosphere	VTTPASTSFSFEPLFLVLAAVGAYGYVRLVRTVERPP
Ga0105245_114123671	3300009098	Miscanthus Rhizosphere	VSAPSASSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAWR
Ga0105243_102768943	3300009148	Miscanthus Rhizosphere	VSAPSASSFSFEPLFLVLSAAAVSGYVRLAKTVERPSAWRATLFGLGIALIAI
Ga0075423_129181531	3300009162	Populus Rhizosphere	VSAPASTSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAGRVTLFGLGVALVAVP
Ga0105248_130250441	3300009177	Switchgrass Rhizosphere	VSIPAPSSFSFEPLFLALAVAGGYGYWRLAKTVERPSTFRACLF
Ga0126382_106086641	3300010047	Tropical Forest Soil	VTAPASTSFSFEPLFLVLAAAGAYGYVRLVRTVERPPWWRAAVFA
Ga0134082_103163412	3300010303	Grasslands Soil	VNPPASTSFSFEWLFLVLGAAAVVGYVRMARTVERPSRGRAALFGLGVALVVFSLNSPLE
Ga0134067_101967951	3300010321	Grasslands Soil	VTPASTSFSFEPAFLVLGAAAVYGYVRLARTVEKPSAGRVTLFGLGVALIALPLNSPLE
Ga0126376_112780102	3300010359	Tropical Forest Soil	VTPSASSFTFEPLFLALGVAGGYGYWRLARTVERPSGF
Ga0105239_128136391	3300010375	Corn Rhizosphere	VSAPDSTAFSFEPLFLVLSAAAVYGYVRLAKTVERPSAGRVTLFGLGVALVAVPLNSPLETI
Ga0126381_1022451071	3300010376	Tropical Forest Soil	VSPTSFSFEPLFLVLAVAAGAVYWRAARSDPPGGWRATSFGTG
Ga0126381_1043364332	3300010376	Tropical Forest Soil	VHPPAPASFSFEPLFLVLAVAGGWLYVREARREPTPWW
Ga0134126_101062786	3300010396	Terrestrial Soil	VSIPAPSSFSFEPLFLALAVAGGYGYWRLAKTVER
Ga0134126_102833534	3300010396	Terrestrial Soil	VSPPASTSFSFEPLFLVLAAGAVYGYVRLARTVERPSGWRATLFGLGVALVAVSLNSPL*
Ga0134123_126179621	3300010403	Terrestrial Soil	VSIPAPSSFSFEPLFLALAVAGGYGYWRLAKTVERPSTFRACLFSLG
Ga0138514_1000371861	3300011003	Soil	LNPPAWYLFSFEPLFLVLALAAGYGYFCLARSVERPSRARATIFVLGLVLVAFSLNSPLDAPRQ
Ga0151490_13768862	3300011107	Soil	VTPPAASSFSFEPLFLVFGAVVVYGYVRLARTVERPSFWRATVFGLGVALVTISLNSPLE
Ga0137364_106953922	3300012198	Vadose Zone Soil	VNPPASTSFSFEWLFLVLGAAAVVGYVRMARTVERPSRGRA
Ga0137365_111140432	3300012201	Vadose Zone Soil	VTPSASSFSFEPAFLVLGAAAVYGYVRLARTVEKPSAGRATLFG
Ga0137365_111598562	3300012201	Vadose Zone Soil	VSAPASYSFSFEPIFFALSAAAVYGYVRLARTVERPSRLQVALFG
Ga0137377_109702302	3300012211	Vadose Zone Soil	VTPSASSFSFEPAFLVLGAAAVYGYVRLARTVEKPSAGRVTLFGLGVALIALPLNSPLET
Ga0137371_106668611	3300012356	Vadose Zone Soil	VSAPASYSFSFEPAFLVLAAAAVYGYVRLARSVERPSRIRAAIFGTGIVLIAVSLNSP
Ga0137375_104869081	3300012360	Vadose Zone Soil	VSAPASYSFSFEPIFLVLAAGALYGYVRLARTGERPSRIRAAIFGTGIALIAVSLNSP
Ga0157339_10679631	3300012505	Arabidopsis Rhizosphere	VIASAPAATSFSFEPLFAVLAAAALYGYVRLARTVERPSAWRATLFGLGLVLVAVP
Ga0157301_101958952	3300012911	Soil	VSTPAATSFSFEPLFLVLCAAAVYAYVRMARTVERPGWWRATLFGTGIVLI
Ga0157298_102445992	3300012913	Soil	VSPPASTSFSFEPLFLVLSAAAVFGYVRLARTVERPSAWRATLFGLGV
Ga0126375_108329021	3300012948	Tropical Forest Soil	VSAPVATSFSFEPLFVVVAVAAVYGYVRLARTVERPSGWRATLFGLGIVLVAVPLNSP
Ga0164300_104006842	3300012951	Soil	VTVPSSTSFSFEPLFLVLAAAAVYGYVRLARTVERPSGWRATLFG
Ga0134087_106280112	3300012977	Grasslands Soil	VTPASTSFSFEPAFLVLGAAAVYGYVRLARTVERPSVGRATLFGLGVALIALPLNSPLETVA
Ga0164309_112797322	3300012984	Soil	VSAPASTSFSFEPLFLVLAAAAVYGYVRLARTGERPSGWRATLFGLGVAFV
Ga0164308_112772791	3300012985	Soil	VSPPASTSFSFEPLFLVLAAAAVYGYVRLARTVER
Ga0164305_115960621	3300012989	Soil	VSPPASTSFSFEPLFLVLAAGAVYGYVRLARTIERPSGWRATLFGLGVAL
Ga0163162_108162092	3300013306	Switchgrass Rhizosphere	VTAPASTSFTFEPLFIVLAAVGAYGYLRLARTVERPPWWRAALFGLGI
Ga0173483_104140811	3300015077	Soil	VSVPAPSSFSFEPLFLALAVAGGYGYWRLARTVERPARFRACLFGLGLVL
Ga0173483_104781171	3300015077	Soil	VTAPASTSFSFEPLFLVLAAVAVYGYVRLAREVDRPSPWRATLFGLGILL
Ga0134072_103847981	3300015357	Grasslands Soil	VTPASTSFSFEPAFLVLGAAAVYGYVRLARTVERPSVGRATLFGLGVALIALPLNSPLET
Ga0187785_101664731	3300017947	Tropical Peatland	VTTPAASSFSFEPLFLVFGAVVVYGYVRLARTVERPSAW
Ga0066669_117228281	3300018482	Grasslands Soil	VNPPASYSFSFEPLFLVLAIAAGYGYFRLARTVERPSRTRAAIFALGLV
Ga0126371_125253491	3300021560	Tropical Forest Soil	VSVAAPSSFSFEPLFFALAVAGGYGYWRLTKTVERPSGFRALLFV
Ga0222622_102464903	3300022756	Groundwater Sediment	VSTPASTSFSFEPLFLVLSVAAVYGYVRLARTVERPPAWRATLFGLGVVLVAVPLNSPLE
Ga0247788_10475941	3300022901	Soil	VTAPASTSFSFEPLFIVLAAAGVYGYVRLARAVERPPWWRAALFGLGILLVA
Ga0207642_106715942	3300025899	Miscanthus Rhizosphere	VSAPSASSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAWRVTLF
Ga0207644_112748212	3300025931	Switchgrass Rhizosphere	RAEPQARLHVSIPAPSSFSFEPLFLALAVAGGYGYWRLAKTVERPSTFRACLF
Ga0207679_109799921	3300025945	Corn Rhizosphere	VSAPASTSFSFEPLFLVLSAAAVYGYVRLARSVERPSGWRITL
Ga0207651_107090521	3300025960	Switchgrass Rhizosphere	VSIPAPSSFSFEPLFLAFAVAGGYGYWRLAKTVERPSTFRACLFSLGLL
Ga0207651_113861341	3300025960	Switchgrass Rhizosphere	VSASASTSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAGRVTLFGLGVALVAVPLNSPLETIAI
Ga0209178_12157061	3300027725	Agricultural Soil	VSIPAPSSFSFEPLFLALAVAGGYGYWRLAKTVERPSTFRACLFSLGLLLVAVPL
Ga0209074_104296281	3300027787	Agricultural Soil	VSAPASTSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAGRVTLFGLGVALVAVPLN
Ga0307321_10321981	3300028704	Soil	VNAPAASSFSFEPLFLALAIGAVYGYVRLAKTVERPSR
Ga0307279_101001051	3300028709	Soil	VSTPASTSFSFEPLFLVLAAAAVYGYVRLARTVERPSGWRATLFGLGVALVAVSLNS
Ga0307322_100716902	3300028710	Soil	VNAPAASSFSFEPLFLALAIGAVYGYVHLARTVERPSRGRTALFVLGALLIATSLNS
Ga0307313_100001231	3300028715	Soil	VNAPAASSFSFEPLFLALAIGAVYGYVRLAKTVERPSRGRTALFVLG
Ga0307315_102090732	3300028721	Soil	VSAPASTSFSFEPLFLVLAAAAVYGYVRLARTVERPSRFRATLF
Ga0307318_101190261	3300028744	Soil	VSAPAASSFSFEPLFLALAIGAVYGYVRLAKTVERPSRGRTAL
Ga0307280_100090455	3300028768	Soil	VSTPASTSFSFEPLFLVLAAAAVYGYVRLARTVERPSGWRAALFGL
Ga0307288_100790291	3300028778	Soil	VSGAPAASSFSFEPVFLVLAAAAAYGYWRLTRTVERPSAGRVFLF
Ga0307282_103932782	3300028784	Soil	VNAPAASSFSFEPLFLALAIGAVYGYVRLAKTVERPSRGRTALFVLGA
Ga0307305_101759152	3300028807	Soil	VSAPASTSFSFEPLFLVLAAAAVYGYVRLARTVERP
Ga0307292_103297002	3300028811	Soil	VSTPASTSFSFEPLFLVLAAAAVYGYVRLARTVER
Ga0307296_100326925	3300028819	Soil	VTPPASTSFSFEPLFLVLAASAVYGYVRLARTVERPS
Ga0307310_104755742	3300028824	Soil	VSAPSASSFSFEPLFLVLSAAAVYGYVRLAKTVERPSAWRATLFGLGIAL
Ga0307278_100163716	3300028878	Soil	VSPPASYSFSFEPLFLVLAAAAGYGYVRLARSVERPSRARATVFALSLALIAF
Ga0307308_101759601	3300028884	Soil	VTPSASSFSFEPAFLVLGAAAVYGYVRLSRTVEKPSAGRA
Ga0308175_1002950323	3300031938	Soil	VNAPSASAFSFEPLFLLLSAAAVYGYVRLAKTVERPSAWRATL
Ga0310906_114347412	3300032013	Soil	VSAPASTSFSFEPLFLVLAAAAVYGYVRLARTVERPSGWRATLLGLGVA
Ga0308173_115770302	3300032074	Soil	VSPPASTSFSFEPLFLVLAAAAVYGYVRLARTVERPSSGRATLFGL
Ga0307415_1006441042	3300032126	Rhizosphere	VSVPASTAFSFEPLFVVLAAVAVYGYVRLARTVERPSGWRAT
Ga0335084_111957301	3300033004	Soil	VTSPAASSFSFEPLFLVFGAVVVYGYVRLARTVERPSFWRATLFGLGVAL
Ga0335077_114304801	3300033158	Soil	VTPPAASSFSFEPLFLVLAAAAVYGHVRLARTVERPSGWRAAVFGTGIALV
Ga0326726_117769331	3300033433	Peat Soil	VTTPAAGSFSFEPAFLVFGAAVVYGYVRLARTVERP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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