NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103630

Metagenome / Metatranscriptome Family F103630

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103630
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 88 residues
Representative Sequence VYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA
Number of Associated Samples 93
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.01 %
% of genes from short scaffolds (< 2000 bps) 98.02 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (79.208 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.852 % of family members)
Environment Ontology (ENVO) Unclassified
(38.614 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.535 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 75.86%    β-sheet: 0.00%    Coil/Unstructured: 24.14%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF01668SmpB 76.24
PF13468Glyoxalase_3 12.87
PF05544Pro_racemase 4.95
PF07690MFS_1 0.99
PF01694Rhomboid 0.99
PF13242Hydrolase_like 0.99
PF06267DUF1028 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0691tmRNA-binding proteinPosttranslational modification, protein turnover, chaperones [O] 76.24
COG3938Proline racemase/hydroxyproline epimeraseAmino acid transport and metabolism [E] 4.95
COG0705Membrane-associated serine protease, rhomboid familyPosttranslational modification, protein turnover, chaperones [O] 0.99
COG3342Uncharacterized conserved protein, Ntn-hydrolase superfamilyGeneral function prediction only [R] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.21 %
UnclassifiedrootN/A20.79 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004153|Ga0063455_100487174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes763Open in IMG/M
3300004480|Ga0062592_100347762All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300005332|Ga0066388_106209265All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300005344|Ga0070661_100283057All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300005345|Ga0070692_10122709All Organisms → cellular organisms → Bacteria1451Open in IMG/M
3300005347|Ga0070668_100622649All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300005355|Ga0070671_100737560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes856Open in IMG/M
3300005365|Ga0070688_100756387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes757Open in IMG/M
3300005434|Ga0070709_10965598All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300005450|Ga0066682_10892857All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005544|Ga0070686_100700759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium808Open in IMG/M
3300005547|Ga0070693_100948881All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300005614|Ga0068856_102343973All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300005616|Ga0068852_100221424All Organisms → cellular organisms → Bacteria1800Open in IMG/M
3300005618|Ga0068864_102527223All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005764|Ga0066903_103926256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes798Open in IMG/M
3300006028|Ga0070717_11460542All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006175|Ga0070712_101836568All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300006573|Ga0074055_11434887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes602Open in IMG/M
3300006574|Ga0074056_11765002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes617Open in IMG/M
3300006574|Ga0074056_11841695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1314Open in IMG/M
3300006577|Ga0074050_12096602All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300006579|Ga0074054_11634427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium625Open in IMG/M
3300006580|Ga0074049_13170589All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300006581|Ga0074048_13472591All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300006603|Ga0074064_11799114All Organisms → cellular organisms → Bacteria1389Open in IMG/M
3300006606|Ga0074062_10030939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes536Open in IMG/M
3300006954|Ga0079219_12000689All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300009093|Ga0105240_12766848All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300009098|Ga0105245_12169097Not Available609Open in IMG/M
3300009545|Ga0105237_10793496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium954Open in IMG/M
3300009545|Ga0105237_12626078Not Available514Open in IMG/M
3300010373|Ga0134128_10882533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium990Open in IMG/M
3300010375|Ga0105239_12874817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium562Open in IMG/M
3300011106|Ga0151489_1750022All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300011107|Ga0151490_1435150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium734Open in IMG/M
3300012502|Ga0157347_1034520Not Available647Open in IMG/M
3300012951|Ga0164300_10134560All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300012957|Ga0164303_11219122Not Available552Open in IMG/M
3300012960|Ga0164301_11626740Not Available537Open in IMG/M
3300012988|Ga0164306_10736404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium787Open in IMG/M
3300012989|Ga0164305_11577589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300013102|Ga0157371_10769410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300013297|Ga0157378_11822526All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300014166|Ga0134079_10187016Not Available860Open in IMG/M
3300014969|Ga0157376_10880994All Organisms → cellular organisms → Bacteria → Terrabacteria group912Open in IMG/M
3300015373|Ga0132257_102514074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium669Open in IMG/M
3300015374|Ga0132255_101014019Not Available1245Open in IMG/M
3300015374|Ga0132255_103329383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium685Open in IMG/M
3300016319|Ga0182033_11280652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium658Open in IMG/M
3300019361|Ga0173482_10410962Not Available632Open in IMG/M
3300021080|Ga0210382_10555030All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300025898|Ga0207692_10489779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium779Open in IMG/M
3300025913|Ga0207695_10026277All Organisms → cellular organisms → Bacteria6499Open in IMG/M
3300025915|Ga0207693_11265642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria553Open in IMG/M
3300025916|Ga0207663_11015928Not Available665Open in IMG/M
3300025916|Ga0207663_11232366Not Available602Open in IMG/M
3300025917|Ga0207660_10439226All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300025922|Ga0207646_11096640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300025923|Ga0207681_10788555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium793Open in IMG/M
3300025924|Ga0207694_10003667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria12149Open in IMG/M
3300025927|Ga0207687_11113251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium678Open in IMG/M
3300025928|Ga0207700_10256841All Organisms → cellular organisms → Bacteria → Terrabacteria group1495Open in IMG/M
3300025928|Ga0207700_11696221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300025931|Ga0207644_11357868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium597Open in IMG/M
3300025933|Ga0207706_11329815Not Available593Open in IMG/M
3300025941|Ga0207711_10298075All Organisms → cellular organisms → Bacteria → Terrabacteria group1487Open in IMG/M
3300025949|Ga0207667_11752213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium586Open in IMG/M
3300025960|Ga0207651_11183106Not Available686Open in IMG/M
3300025972|Ga0207668_10263770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1405Open in IMG/M
3300026023|Ga0207677_12090198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300026118|Ga0207675_101392762Not Available722Open in IMG/M
3300026142|Ga0207698_10290442All Organisms → cellular organisms → Bacteria → Terrabacteria group1517Open in IMG/M
3300026142|Ga0207698_10448747All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300028705|Ga0307276_10133535Not Available622Open in IMG/M
3300028719|Ga0307301_10049158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1296Open in IMG/M
3300028755|Ga0307316_10084306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1097Open in IMG/M
3300028782|Ga0307306_10165678Not Available620Open in IMG/M
3300028784|Ga0307282_10527960Not Available573Open in IMG/M
3300028799|Ga0307284_10418601All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300028824|Ga0307310_10456884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium639Open in IMG/M
3300028824|Ga0307310_10680836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300028875|Ga0307289_10056892Not Available1569Open in IMG/M
3300031798|Ga0318523_10298994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium803Open in IMG/M
3300031820|Ga0307473_11353548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300031845|Ga0318511_10544607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300031897|Ga0318520_11107400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300031938|Ga0308175_101601483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium728Open in IMG/M
3300031938|Ga0308175_102005491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium649Open in IMG/M
3300031939|Ga0308174_10123477All Organisms → cellular organisms → Bacteria1892Open in IMG/M
3300031996|Ga0308176_12705510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium528Open in IMG/M
3300032013|Ga0310906_10735376Not Available692Open in IMG/M
3300032041|Ga0318549_10360580Not Available655Open in IMG/M
3300032067|Ga0318524_10411300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium706Open in IMG/M
3300032074|Ga0308173_11331705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium673Open in IMG/M
3300032174|Ga0307470_10872111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300032180|Ga0307471_102230724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium690Open in IMG/M
3300032205|Ga0307472_101032719Not Available773Open in IMG/M
3300033500|Ga0326730_1069141Not Available665Open in IMG/M
3300033550|Ga0247829_11568636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300033551|Ga0247830_10944801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium687Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.95%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.98%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.98%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.99%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.99%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.99%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.99%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012502Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610Host-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033500Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fractionEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0063455_10048717423300004153SoilVMLLVVAGLPELVYVTLSTYLQHNTRSEYRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGMFIGSQRLAGLDQAAEPETVTA*
Ga0062592_10034776213300004480SoilNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0066388_10620926523300005332Tropical Forest SoilLVYVSLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWVFPLVGYLNAHRGWTYGYTVCAALSLVAAGMFIASQRLSGLEPAAEPEPIAA*
Ga0070661_10028305743300005344Corn RhizosphereFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0070692_1012270933300005345Corn, Switchgrass And Miscanthus RhizosphereVGPLLPGLLLPVLVLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT*
Ga0070668_10062264913300005347Switchgrass RhizosphereLPVLMLLVVAGLPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0070671_10073756023300005355Switchgrass RhizosphereSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0070688_10075638723300005365Switchgrass RhizospherePVLVLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT*
Ga0070709_1096559823300005434Corn, Switchgrass And Miscanthus RhizosphereSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0066682_1089285723300005450SoilTYLQHNTRSEFRATSMSIAEGCFSIQMLWVFPLVGYLNAHRGWTYGYTVCGALSLVAAGMFIASQRLSGLDPAVEPEPVAA*
Ga0070686_10070075913300005544Switchgrass RhizosphereIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0070693_10094888113300005547Corn, Switchgrass And Miscanthus RhizosphereVPVVLLMLISGAPELVYVTLSTYLQHNTRSEYRATSTSIAEGCFSIQMLWLFPVTGYVIQHEGYRLGFTLCGGLILVGAALFIASQRLPGLDAAGEDATATAAA*
Ga0068856_10234397313300005614Corn RhizosphereLMLISGAPELVYVTLSTYLQHNTRSAYRATSMSIAEGCFSIQMLWLFPLTGYVIQHEGYRLGYALCGVLILVGAALFVASQRLPGLDAAGEDAAATVAA*
Ga0068852_10022142413300005616Corn RhizosphereTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0068864_10252722313300005618Switchgrass RhizosphereQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0066903_10392625613300005764Tropical Forest SoilDVLYVTLSTSIQRNTRSEFRATSMSIAEAGFSIQMLWLFPLVGLLIQHSGYGLGYGLCAVVVVVSSALFVVSTRLPGLDDEVPEPELVAT*
Ga0070717_1146054223300006028Corn, Switchgrass And Miscanthus RhizosphereMLLVVAGLPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEATAATA*
Ga0070712_10183656813300006175Corn, Switchgrass And Miscanthus RhizosphereAVSSLAAAGGLVAGALLPGLAGPVILLVLIAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLTGYVIEHHGYALGFGLCAALIVAGAGMFIGSQRLPGLELGEEREVAAA*
Ga0074055_1143488723300006573SoilATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAALFIGSQRLAGLDQATEPEAATA*
Ga0074056_1176500213300006574SoilTSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAALFIGSQRLAGLDQATEPEAATA*
Ga0074056_1184169523300006574SoilLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYVVQHSGYGIGFGLCAGFMAAGAALFNASQRLPGLEPAPAT*
Ga0074050_1209660223300006577SoilVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLIGYTVQHSGYGIGFGLCAGFMATGAVLFIASQRLPGLEPAPAT*
Ga0074054_1163442723300006579SoilFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEPTAATA*
Ga0074049_1317058913300006580SoilATLAAIGGLLVGPHLPGLVLPVIVLISVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYTVQHSGYGIGFGLCAGFMAAGAVLFIASQRLPGLEPAPAT*
Ga0074048_1347259123300006581SoilGGLLVGPYLPGLLLPVIVLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLIGYTVQHSGYGIGFGLCAGFMATGAVLFIASQRLPGLEPAPAT*
Ga0074064_1179911443300006603SoilFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAALFIGSQRLAGLDQATEPEAATA*
Ga0074062_1003093923300006606SoilVGPHLPGLVLPVLLLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYSVQHAGYGTGFALCAGLMATGAVLFIASQKLPGLEPAPATT*
Ga0079219_1200068923300006954Agricultural SoilLMLISGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYAIQHEGYRLGFTLCGALILVGAALFIASQRLPGLEAAGDEAAATVAA*
Ga0105240_1276684813300009093Corn RhizosphereAPELVYVTLSTYLQHNTRSEYRATSMSIAEGCFSIQMLWLFPLTGYVIQHEGYRLGFAVCGALILVGAALFIASQRLPGLDAAGEDAAATVAA*
Ga0105245_1216909713300009098Miscanthus RhizosphereTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEPEAATA*
Ga0105237_1079349633300009545Corn RhizosphereHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEPEAATA*
Ga0105237_1262607823300009545Corn RhizosphereGLVVGVAVPGLAVPVVMLMLISGAPELVYVTLSTYLQHNTRSAYRATSMSIAEGCFSIQMLWLFPLTGYAIQHEGYRLGFGVCGALILVGAALFIASQRLPGLDAAGEDAAATVAV*
Ga0134128_1088253323300010373Terrestrial SoilYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0105239_1287481713300010375Corn RhizosphereMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEPEAATA*
Ga0151489_175002233300011106SoilTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0151490_143515013300011107SoilLVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYVVQHSGYGIGFCLCAGFMATGAALFIASQRLPGLEPAPAT*
Ga0157347_103452023300012502Arabidopsis RhizosphereLVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT*
Ga0164300_1013456033300012951SoilFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0164303_1121912213300012957SoilATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0164301_1162674023300012960SoilEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGMFIGSQRLAGLDQAAEPTAATA*
Ga0164306_1073640423300012988SoilLPVLVLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT*
Ga0164305_1157758913300012989SoilLQHNTRSEFRATSMSIAEGFFSVQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEATAATA*
Ga0157371_1076941023300013102Corn RhizosphereELVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT*
Ga0157378_1182252623300013297Miscanthus RhizosphereMGERVPLTLSVGVGSLAMAVGLVVGGTVPGLVVPVVMLMLISGAPELVYVTLSTYLQHNTRSAYRATSMSIAEGCFSIQMLWLFPLTGYVIQHEGYRLGYALCGVLILVGAALFVASQRLPGLDAAGEDATTTAAA*
Ga0134079_1018701613300014166Grasslands SoilLALPVLMLLVVAGLPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQATEPEAATA*
Ga0157376_1088099413300014969Miscanthus RhizosphereVTLSTYLQHNTRSEYRATSMSIAEGCFSIQMLWLFPLTGYVIQHEGYRLGYALCGVLILVGAALFVASQRLPGLDAAGEDATATAAA*
Ga0132257_10251407413300015373Arabidopsis RhizosphereTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGPFIGSQRLAGLDQATEPEPATA*
Ga0132255_10101401913300015374Arabidopsis RhizosphereILLMLIAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLTGFLIEREGYTTGFGLCAALIMVGAAMFVASQRLSGLGPPLEDEPAADGEPAAA*
Ga0132255_10332938323300015374Arabidopsis RhizospherePELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYSVQHAGYGTGFALCAGLMATGAALFIASQKLPGLEPAPATT*
Ga0182033_1128065213300016319SoilTRSEFRATSMSIAEAMFSVQMLWLFPLVGYLAAHRGYVTGYTLCAMLSLVAAGLFIASQRLAGLEPVAEATAVGA
Ga0173482_1041096223300019361SoilFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQTTEPEAATA
Ga0210382_1055503013300021080Groundwater SedimentGLASLAAIVGLVVGPHLPGLLLPVILLASVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYSVQHAGYGTGFGLCAGLMAAGAALFIASQRLPGLEPAPAT
Ga0207692_1048977913300025898Corn, Switchgrass And Miscanthus RhizosphereYPTSGNSHSIWIEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEPEAATA
Ga0207695_1002627773300025913Corn RhizospherePVVLLMLISGAPELVYVTLSTYLQHNTRSAYRATSMSIAEGCFSIQMLWLFPLTGYAIQHEGYRLGFGVCGALILVGAALFIASQRLPGLDAAGEDAAATVAV
Ga0207693_1126564223300025915Corn, Switchgrass And Miscanthus RhizosphereRVPLTVSVAVSSLAAAGGLVAGALLPGLAGPVILLVLIAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLTGYVIEHHGYALGFGLCAALIVAGAGMFIGSQRLPGLELGEEREVAAA
Ga0207663_1101592813300025916Corn, Switchgrass And Miscanthus RhizosphereLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0207663_1123236623300025916Corn, Switchgrass And Miscanthus RhizosphereTYLQHNTRSEYRATSMSIAEGFFSIQMLWLFPLVGYLITRSGYVTGYAVCAAMSLLAAGMFIGSQRLAGLDQAAEPTAATA
Ga0207660_1043922633300025917Corn RhizospherePELVYVTLSTYLQHNTRSEYRATSMSIAEGCFSIQMLWLFPLTGYVIQHEGYRLGFALCGALILVGAALFIASQRLPGLDAAGEDAAATVAA
Ga0207646_1109664013300025922Corn, Switchgrass And Miscanthus RhizosphereNPRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0207681_1078855513300025923Switchgrass RhizosphereSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0207694_1000366713300025924Corn RhizosphereVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0207687_1111325113300025927Miscanthus RhizosphereSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEPEAATA
Ga0207700_1025684113300025928Corn, Switchgrass And Miscanthus RhizosphereMLISGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLTGYVIQHEGYRLGFTLCGALILVGAALFIASQRLPGLEAAGDDAAATAAA
Ga0207700_1169622113300025928Corn, Switchgrass And Miscanthus RhizosphereGFFSVQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEATAAT
Ga0207644_1135786813300025931Switchgrass RhizosphereLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0207706_1132981513300025933Corn RhizosphereVAVLPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0207711_1029807533300025941Switchgrass RhizosphereSGAPELVYVTLSTYLQHNTRSEYRATSMSIAEGCFSIQMLWLFPLTGYVIQHEGYRLGYALCGVLILVGAALFVASQRLPGLDAAGEDATATAAA
Ga0207667_1175221313300025949Corn RhizosphereLLPVLVLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT
Ga0207651_1118310613300025960Switchgrass RhizospherePVLVLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT
Ga0207668_1026377013300025972Switchgrass RhizospherePGLALPVLMLLVVAGLPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0207677_1209019813300026023Miscanthus RhizosphereNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYTVCAAMSLLAAGLFIGSQRLAGLDQATEPEAVTA
Ga0207675_10139276223300026118Switchgrass RhizosphereLLVVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0207698_1029044233300026142Corn RhizosphereISGAPELVYVTLSTYLQHNTRSEYRATSMSIAEGCFSIQMLWLFPLTGYVIQHEGYRLGFAVCGALILVGAALFIASQRLPGLDTAREDATATAAA
Ga0207698_1044874713300026142Corn RhizosphereVAGLPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAALSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0307276_1013353523300028705SoilPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYVVQHSGYGIGFGLCAGFMAAGAALFIASQRLPGLEPAPAT
Ga0307301_1004915833300028719SoilLVLPVLLLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYAVQHSGYGVGFGLCAGFMAVGAALFIASQRLPGLEPAPAT
Ga0307316_1008430623300028755SoilLLVGPHLPGLVLPVLLLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYAVQHSGYGVGFDLCAGFMAVGAALFIASQRLPGLEPAPAT
Ga0307306_1016567813300028782SoilGPHLPGLVLPVLLLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYAVQHSGYGVGFGLCAGFMAVGAALFIASQRLPGLEPAPAT
Ga0307282_1052796013300028784SoilAGLPELVYVTLSTYLQHNTRSEYRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEPTAATA
Ga0307284_1041860113300028799SoilLLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYAVQHSGYGVGFDLCAGFMAVGAALFIASQRLPGLEPAPAT
Ga0307310_1045688423300028824SoilVGLLVGPSLPGLVLPMLVLLVVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWVFPLVGYLNAHQGWTYGYAVCAVLSLVAAAMFIASQRLSGLEPAGEVEPVAA
Ga0307310_1068083613300028824SoilAGAPELVYVTLSTYLQHNTRSEYRATSMSIAEGCFSIQMLWLFPLVGYAVQHSGYGVGFGLCAGFMAVGAALFIASQRLPGLEPAPAT
Ga0307289_1005689213300028875SoilMLMLLVVAGLPELVYVTLSTYLQHNTRSEYRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAASLFIGSQRLAGLDQAAEPK
Ga0318523_1029899413300031798SoilLQHNTRSEFRATSMSIAEAVFSVQMLWLFPLVGYLAAHRGYVTGYTLCAMLSLVAAGLFIASQRLAGLEPVAEATAVGA
Ga0307473_1135354823300031820Hardwood Forest SoilAGLPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0318511_1054460723300031845SoilLVYVTLSTYLQHNTRSEFRATSMSIAEAMFSVQMLWLFPLVGYLAAHRGYVTGYTLCAMLSLVAAGLFIASQRLAGLEPVAEATAVGA
Ga0318520_1110740023300031897SoilFRATSMSIAEAMFSVQMLWLFPLVGYLAAHRGYVTGYTLCAMLSLVAAGLFIASQRLAGLEPVAEATAVGA
Ga0308175_10160148323300031938SoilAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYATGFSLCAGLMGAGAALFIASQRLPGLEPAPVTT
Ga0308175_10200549123300031938SoilSEFRATSMSIAESCFSVQMLWLFPLVGYLCSTSGYVAGYAVCAVLSLVAAGMFIGSQRLAGLEPVPEPAAAEAPAVTA
Ga0308174_1012347713300031939SoilVTLSTYLQHNTRSQYRATSMSIAEGFFSVQMLWLFPLVGFLITRDGYVTGYALCAAMSLLAAGMFIASQRLAGLDQAAEPEPATA
Ga0308176_1270551023300031996SoilLFPLVGYLCSTSGYVAGYAVCAVLSLVAAGMFIGSQRLAGLEPVPEPAAAEAPAVTA
Ga0310906_1073537613300032013SoilLPELVYVTLSTYLQHNTRSEFRATSMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYTVCAAMSLLAAGLFIGSQRLAGLDQATEPEAATA
Ga0318549_1036058023300032041SoilLQHNTRSEFRATSMSIAEAMFSVQMLWLFPLVGYLAAHRGYVTGYTLCAMLSLVAAGLFIASQRLAGLEPVAEATAVGA
Ga0318524_1041130013300032067SoilYLQHNTRSEFRATSMSIAEAMFSVQMLWLFPLVGYLAAHRGYVTGYTLCAMLSLVAAGLFIASQRLAGLEPVAEATAVGA
Ga0308173_1133170523300032074SoilMSIAEGFFSIQMLWLFPLVGYLITRNGYVTGYAVCGAMSLLAAGLFIGSQRLAGLDQAAEPAAATA
Ga0307470_1087211113300032174Hardwood Forest SoilLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYSVQHAGYGTGFALCAGLMATGAALFIASQKLPGLEPAPATT
Ga0307471_10223072413300032180Hardwood Forest SoilSEFRATSMSIAESCFSIQMLWLFPLVGYLITRNGYVTGYAVCAAMSLLAAGLFIGSQRLAGLDQAAEPEAATA
Ga0307472_10103271923300032205Hardwood Forest SoilLQHNTRSEFRATSMSIAEGVFSIQMLWLFPLVGYLCGSRGYEQGYVLCGVVLAVSGALFILSQRLPGLEEPEPATA
Ga0326730_106914123300033500Peat SoilVLPVIVLVSVAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEGCFSIQMLWLFPLVGYVVQHSGYGIGFGLCAGFMTAGAVLFIASQRLPGLEPAPAT
Ga0247829_1156863613300033550SoilAGAPELVYVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT
Ga0247830_1094480123300033551SoilVTLSTYLQHNTRSEFRATSMSIAEACFSIQMLWLFPLVGYMVQHTGYGMGFALCAALMCAGAALFIASQRLPGLEPAPATT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.