NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103605

Metagenome / Metatranscriptome Family F103605

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103605
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 120 residues
Representative Sequence MKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLQ
Number of Associated Samples 84
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.24 %
% of genes near scaffold ends (potentially truncated) 33.66 %
% of genes from short scaffolds (< 2000 bps) 73.27 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (71.287 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.812 % of family members)
Environment Ontology (ENVO) Unclassified
(23.762 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.475 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 11.33%    β-sheet: 40.67%    Coil/Unstructured: 48.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF03729DUF308 37.62
PF12631MnmE_helical 24.75
PF01134GIDA 7.92
PF13932GIDA_C 1.98
PF01424R3H 1.98
PF02527GidB 1.98
PF02142MGS 1.98
PF01578Cytochrom_C_asm 0.99
PF04542Sigma70_r2 0.99
PF03167UDG 0.99
PF13365Trypsin_2 0.99
PF08281Sigma70_r4_2 0.99
PF01809YidD 0.99
PF00109ketoacyl-synt 0.99
PF00202Aminotran_3 0.99
PF0209660KD_IMP 0.99
PF00468Ribosomal_L34 0.99
PF00825Ribonuclease_P 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG3247Acid resistance membrane protein HdeD, DUF308 familyGeneral function prediction only [R] 37.62
COG035716S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B)Translation, ribosomal structure and biogenesis [J] 1.98
COG1847Predicted RNA-binding protein Jag (SpoIIIJ-associated), conains KH and R3H domainsGeneral function prediction only [R] 1.98
COG0230Ribosomal protein L34Translation, ribosomal structure and biogenesis [J] 0.99
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.99
COG0594RNase P protein componentTranslation, ribosomal structure and biogenesis [J] 0.99
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.99
COG0706Membrane protein insertase Oxa1/YidC/SpoIIIJCell wall/membrane/envelope biogenesis [M] 0.99
COG0759Membrane-anchored protein YidD, putatitve component of membrane protein insertase Oxa1/YidC/SpoIIIJCell wall/membrane/envelope biogenesis [M] 0.99
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.99
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.99
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.99
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 0.99
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms71.29 %
UnclassifiedrootN/A28.71 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005435|Ga0070714_100760727Not Available937Open in IMG/M
3300005531|Ga0070738_10014468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes6526Open in IMG/M
3300005533|Ga0070734_10038257All Organisms → cellular organisms → Bacteria2982Open in IMG/M
3300005533|Ga0070734_10131234All Organisms → cellular organisms → Bacteria1460Open in IMG/M
3300005541|Ga0070733_10081775All Organisms → cellular organisms → Bacteria2044Open in IMG/M
3300005602|Ga0070762_10009964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes4747Open in IMG/M
3300005712|Ga0070764_10107710All Organisms → cellular organisms → Bacteria1496Open in IMG/M
3300005764|Ga0066903_100028649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes6221Open in IMG/M
3300005921|Ga0070766_10000002All Organisms → cellular organisms → Bacteria378590Open in IMG/M
3300005921|Ga0070766_10067910All Organisms → cellular organisms → Bacteria2045Open in IMG/M
3300006059|Ga0075017_100598482Not Available843Open in IMG/M
3300006176|Ga0070765_100705843All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300006893|Ga0073928_10019630All Organisms → cellular organisms → Bacteria7015Open in IMG/M
3300010379|Ga0136449_100052662All Organisms → cellular organisms → Bacteria9115Open in IMG/M
3300011120|Ga0150983_11027989All Organisms → cellular organisms → Bacteria → Terrabacteria group579Open in IMG/M
3300011120|Ga0150983_13189963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 54-19770Open in IMG/M
3300011120|Ga0150983_13753242Not Available527Open in IMG/M
3300011120|Ga0150983_15140322Not Available909Open in IMG/M
3300012677|Ga0153928_1001692All Organisms → cellular organisms → Bacteria9592Open in IMG/M
3300014167|Ga0181528_10161914All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300014168|Ga0181534_10636255Not Available617Open in IMG/M
3300014501|Ga0182024_10556765All Organisms → cellular organisms → Bacteria1445Open in IMG/M
3300014657|Ga0181522_10086418All Organisms → cellular organisms → Bacteria1801Open in IMG/M
3300016357|Ga0182032_10423550All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300016387|Ga0182040_10775059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 54-19789Open in IMG/M
3300016404|Ga0182037_11659571Not Available569Open in IMG/M
3300017947|Ga0187785_10103899All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300017970|Ga0187783_10000612All Organisms → cellular organisms → Bacteria25989Open in IMG/M
3300017970|Ga0187783_10014044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes5907Open in IMG/M
3300017970|Ga0187783_10270192All Organisms → cellular organisms → Bacteria1242Open in IMG/M
3300017975|Ga0187782_11635437Not Available509Open in IMG/M
3300020582|Ga0210395_10215816All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300021181|Ga0210388_10038461All Organisms → cellular organisms → Bacteria3961Open in IMG/M
3300021358|Ga0213873_10000104All Organisms → cellular organisms → Bacteria16425Open in IMG/M
3300021358|Ga0213873_10096354Not Available846Open in IMG/M
3300021361|Ga0213872_10364841Not Available590Open in IMG/M
3300021362|Ga0213882_10324614Not Available644Open in IMG/M
3300021372|Ga0213877_10210829All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300021372|Ga0213877_10225590All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium616Open in IMG/M
3300021377|Ga0213874_10025033Not Available1679Open in IMG/M
3300021388|Ga0213875_10358008All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300021401|Ga0210393_10189155All Organisms → cellular organisms → Bacteria1662Open in IMG/M
3300021405|Ga0210387_10206334All Organisms → cellular organisms → Bacteria1707Open in IMG/M
3300021405|Ga0210387_11854226Not Available507Open in IMG/M
3300021432|Ga0210384_10057913All Organisms → cellular organisms → Bacteria3504Open in IMG/M
3300021439|Ga0213879_10082470Not Available886Open in IMG/M
3300021441|Ga0213871_10074350Not Available964Open in IMG/M
3300021444|Ga0213878_10109646All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300021474|Ga0210390_10541389All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300021474|Ga0210390_11504001Not Available533Open in IMG/M
3300021477|Ga0210398_10111022All Organisms → cellular organisms → Bacteria2227Open in IMG/M
3300021560|Ga0126371_11185363All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300021953|Ga0213880_10065990All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300022522|Ga0242659_1015487All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300022528|Ga0242669_1029450Not Available849Open in IMG/M
3300022557|Ga0212123_10026623All Organisms → cellular organisms → Bacteria6158Open in IMG/M
3300022711|Ga0242674_1011613Not Available931Open in IMG/M
3300022716|Ga0242673_1018273Not Available972Open in IMG/M
3300022718|Ga0242675_1018792All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300027109|Ga0208603_1007661All Organisms → cellular organisms → Bacteria1787Open in IMG/M
3300027505|Ga0209218_1000515All Organisms → cellular organisms → Bacteria4411Open in IMG/M
3300027826|Ga0209060_10068280All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300027826|Ga0209060_10189314All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300027826|Ga0209060_10206006Not Available905Open in IMG/M
3300027855|Ga0209693_10441317All Organisms → cellular organisms → Bacteria → Terrabacteria group626Open in IMG/M
3300027867|Ga0209167_10063911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1829Open in IMG/M
3300027867|Ga0209167_10741499All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300027889|Ga0209380_10000003All Organisms → cellular organisms → Bacteria316019Open in IMG/M
3300028558|Ga0265326_10119360Not Available750Open in IMG/M
3300028800|Ga0265338_10000238All Organisms → cellular organisms → Bacteria101800Open in IMG/M
3300028800|Ga0265338_10145500All Organisms → cellular organisms → Bacteria1849Open in IMG/M
3300028800|Ga0265338_10569799All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300028906|Ga0308309_10114629All Organisms → cellular organisms → Bacteria2112Open in IMG/M
3300030586|Ga0265393_1166647Not Available560Open in IMG/M
3300030605|Ga0210265_1091021Not Available622Open in IMG/M
3300031057|Ga0170834_107616916All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300031122|Ga0170822_13741795All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300031128|Ga0170823_17639780Not Available756Open in IMG/M
3300031231|Ga0170824_125862123All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300031234|Ga0302325_10005720All Organisms → cellular organisms → Bacteria28172Open in IMG/M
3300031235|Ga0265330_10120130All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300031241|Ga0265325_10027656All Organisms → cellular organisms → Bacteria3063Open in IMG/M
3300031249|Ga0265339_10097651Not Available1533Open in IMG/M
3300031474|Ga0170818_114310785Not Available685Open in IMG/M
3300031708|Ga0310686_107591335Not Available1183Open in IMG/M
3300031708|Ga0310686_113471384All Organisms → cellular organisms → Bacteria2148Open in IMG/M
3300031711|Ga0265314_10576761All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300031712|Ga0265342_10429228All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300031715|Ga0307476_10000006All Organisms → cellular organisms → Bacteria593729Open in IMG/M
3300031718|Ga0307474_11147054Not Available615Open in IMG/M
3300031771|Ga0318546_10352036All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300031823|Ga0307478_11428038Not Available574Open in IMG/M
3300031879|Ga0306919_10106609All Organisms → cellular organisms → Bacteria1982Open in IMG/M
3300031947|Ga0310909_10150571All Organisms → cellular organisms → Bacteria1913Open in IMG/M
3300032090|Ga0318518_10536411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 54-19599Open in IMG/M
3300032160|Ga0311301_10095009All Organisms → cellular organisms → Bacteria5903Open in IMG/M
3300032770|Ga0335085_10989465All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300032782|Ga0335082_10443506All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300032829|Ga0335070_10049477All Organisms → cellular organisms → Bacteria → Proteobacteria4637Open in IMG/M
3300032896|Ga0335075_10259582Not Available1992Open in IMG/M
3300032897|Ga0335071_10449650All Organisms → cellular organisms → Bacteria1241Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil8.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere8.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil7.92%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.95%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.95%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.95%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.96%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.96%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.97%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.98%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.98%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock1.98%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots1.98%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.99%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.99%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.99%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.99%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.99%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.99%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005531Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012677Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaGHost-AssociatedOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021361Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2Host-AssociatedOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021372Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021388Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021441Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1Host-AssociatedOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021953Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022711Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300027109Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)EnvironmentalOpen in IMG/M
3300027505Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300028558Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaGHost-AssociatedOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030586Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030605Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE042SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031235Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaGHost-AssociatedOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070714_10076072723300005435Agricultural SoilMKLTLSALAVLCAIILPLNASAKNKKNGSAFGVTVVSCVVNSNGGNTTNGINVVYYNSNDSAATEVDFLVNYAGHKYVLIDKGSFTRGSQINHNLTNSLTGQPWSGPTPKHCGVQRVYLADGNVLQ*
Ga0070738_1001446873300005531Surface SoilMKRTLLFLAALCAVALPAAAARNGSRLGVSIVSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFIVNYGGHKYLMIDRGTFSRGAQINHNLTNALTGQPWDGPTPKRCAVQRVYLQNGNVLQ*
Ga0070734_1003825733300005533Surface SoilMRRALLALIALAIFALPASTQAKIVSRFGVTIVSCVVNSNGNNLTNGINVVYYNTHDSPATEVDFLVNYLGKRFILIDKGTFTRGAQINHNLTNALTGQAWNGPKPKMCRVERVYLANGRSF*
Ga0070734_1013123423300005533Surface SoilMKRPLWIFVAIAIAMASPALQAKSASRHGVTIVSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFAVNYGGHKYLLIDRGTFARGAQINHNLTNALTGQPWDGPQPKRCAVQRVTLADGSVY*
Ga0070733_1008177523300005541Surface SoilMRRALPALMALAIFALPASTQARIVSRYGVTIISCVVNSNGGSLTNGINVVYYNTHDSPATEVDFLVNYLGKRFILIDKGNFTRGSQINHNLTNALTGQSWDGPKPKLCRVERVYLANGRSF*
Ga0070762_1000996493300005602SoilMQRALRALVLLAILVAPTIAQARIVSRFGVTIISCVVNSNGAGLTNGINVVYYNSHDSPAIEVDFLVNYLGRKYLLIDRGTFTRGAQINHNLTNALTGQPWNGSTPKLCRVERVYLANGRTF*
Ga0070764_1010771023300005712SoilMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLH*
Ga0066903_10002864943300005764Tropical Forest SoilMNRAFWIFSILIMFVSPATLQAKNGSRHGVTIVSCVVNSNGNNSTNGINVVYYNTHDSPATEVDFMVNYGGHKYILIDHGSFSRGAQINHNLTNALTGEPWDGPQPKLCAVKRVTLADGSVY*
Ga0070766_100000022123300005921SoilMKRALLTFAALCAVAAAPAAASKTGSAYGVTVTSCVVNSNGGNMTNGINVVYYNTHDSPATEVDFLVNYQGHKYILIDKGSFSRGSQINHNLTNSLTGQAWNGPTPKKCAVQRVYLSDGTVLPQRQ*
Ga0070766_1006791023300005921SoilMQRALLVLVVLATFALPATAQARIVSRYGVTIISCVVNSNGSGQTNGINIVYYNTHDSPATEVDFLVNYLGRRYILIDKGTFSRGAQINHNLINSLTGQTWNGPTPKLCRVERVYLANGRSF*
Ga0075017_10059848213300006059WatershedsMKRRLLVFAALCAVVAPAAAPAKNVAAFGVTIVSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGKQKYVLIDKGRFARGAQINHNLNNALTGQPWDGSKPKRCAVQRVYLQNGEVLQ*
Ga0070765_10070584323300006176SoilLTAQARIVSRFGVTIISCVVNSNGNGQTNGINVVYYNTHDSPATEVDFLVNYMGRRYILIDKGTFSRGAQINHNLNNALTGQPWNDPNPKLCRVERVYLANGRSF*
Ga0073928_1001963083300006893Iron-Sulfur Acid SpringMRRALPALVALAIFALPASTQARIVSRFGVTIISCVVNSNGGSSTNGINVVYYNTHDSPATEIDFLVNYLGKRYILIDKGNFTRGAQINHNLTNSLTGQPWDGPAPKLCRVERVYLANGRSF*
Ga0136449_10005266273300010379Peatlands SoilMQRALLVLVVLATFALPATAQARIVSRYGVTIISCVVNSNGGSQTNGINVVYYNTHDSAATEIDFLVNYLGHRYILIDKGSFSRGAQINHNLTNALTGQPWDGPTPKLCRVERVYLANGRSF*
Ga0150983_1102798923300011120Forest SoilLPFLHRKIKGISMKRALLTLAALCAVAAPAAAASKNGSAFGVTITSCVVNSNGGSLTNGINVVYYNTHDSPATEVDFAVNYHGHKYILIDKGSFARGAQINHNLANSLTGQPWEGSTPKRCAVQRVYLANGNVLQ*
Ga0150983_1318996323300011120Forest SoilESKEAIDMQRVLRALVVFAILIAPVTTQAKIVSRYGVTIISCVVNSNGNGLTNGINVVYYNSHDSPATEVDFLVNYYGRRYLLIDKGSFSRGAQINHNLTNSLTGQSWNGPSPKLCRVERVYLADGRTF*
Ga0150983_1375324223300011120Forest SoilMARALRVLVALAILIAPLTAQARIVSRFGVTIISCVVNSNGNGQTNGVNVVYYNTHDSPATEVDFLVNYMGRRYILIDKGTFSRGAQINHNLNNALTGQPWNDPNPKLCRVERVYLANGRSF*
Ga0150983_1514032223300011120Forest SoilPLLHWKIRGHRMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLH*
Ga0153928_100169253300012677Attine Ant Fungus GardensMKRLLVAIVAFCAVIAPASAKNGSKFGVTIVSCVVNANGSNTNGINVVYYNSNDSAATEVDFLVNYQGHKYILIDKGSFSRGSQINHNLTNALTGQPWAGPTPKKCAVQRVYLQDGNVLQ
Ga0181528_1016191423300014167BogVKRALFFLAALCIVAAPAAAASKNGSAFGVTIVSCVVNSNGNNTTNGINVVYYSTHDSPATEVDFLVNYKGHKYILIDKGTFARGAQINHNLTNSLTGQPWEGPTPKRCAVQRVYLQDGNVLQ*
Ga0181534_1063625523300014168BogVKRALFFLAALCIVAAPAAAASKNGSAFGVTIVSCVVNSNGNNSTNGINVVYYSTHDSPATEVDFLVNYKGHKYILIDKGSFARGAQINHNLTNSLTGQPWEGPTPKRCAVQRVYLQDGNVLQ
Ga0182024_1055676523300014501PermafrostMKRALLTFAAICAVAAAPAAASKTGSAYGVTITSCVVNSNGGNMTNGVNVVYYNTHDSPATEVDFLVNYQGHKYILIDKGSFSRGAQINHNLTNSLTGQAWNGPTPKKCAVQRVYLSDGTVLPQRQ*
Ga0181522_1008641823300014657BogVKRALFFLAALCIVAAPAAAASKNGSAFGVTIVSCVVNSNGNNTTNGINVVYYSTHDSPATQVDFLVNYKGHKYILIDKGTFARGAQINHNLTNSLTGQPWEGPTPKRCAVQRVYLQDGNVLQ*
Ga0182032_1042355023300016357SoilMQRALRVLVVFVILIAPLTAQAKIVSRYGVTIVSCVVNNNGSNVTNGINVVYYNTHDSPATEVDFFVNYLGKHYLLIDKGNFTRGSQINHNLTDSLTGEAWNGDRPKLCRVERVYLADG
Ga0182040_1077505923300016387SoilMQPALPVLVDSVLPIAPLTAQAQIVSRYGVTIVSCVVNNNGSNVTNGINVVYYNTHDSPATEVDFFVNYLGKHYLLIDKGNFTRGSQINHNLTNSLTGEAWNGDRPKLCRVERVYLADGRTF
Ga0182037_1165957113300016404SoilMQRALRVLVVFVILIAPLTAQAKIVSRYGVTIVSCVVNNNGSNVTNGINVVYYNTHDSPATEVDFFVNYLGKHYLLIDKGNFTRGSQINHNLTNSLTGEAWNGDRPKLCR
Ga0187785_1010389923300017947Tropical PeatlandMNRAILAVALLFAVLVPTAAPAKKNGSKFGVTIVSCVVNSKENNQTNGTNIVYYNSNDSAATEVDFLVNYGGHKYVMIDKGHFTRGAQINHNLTNALTGQPFDGPTPKRCAVQRVYLEDGNVLQ
Ga0187783_10000612163300017970Tropical PeatlandVQRTLIAGAAALALVVPATAQAKNVSAFGVSIVSCVVNSNGSNLTNGINIVYYNTHDSPATEVDFLVNYYGHKYILIDKGSFTRGAQINHNLTNALTGQPWNGPTPKRCTVNRVYLANGNVLQ
Ga0187783_1001404463300017970Tropical PeatlandMRRILLIGLAALALLAPATAQAKIVSAFGVTIVSCVVNSNGNNLTNGINIVYYNTHDSPATEVDFLVNYYGHKYILIDKGSFTRGAQINHNLTNALTGQPWEGPTPKRCTVNRVYLANGNVFQ
Ga0187783_1027019223300017970Tropical PeatlandMKRTLLFLAAICCIAAPASAAKNGSKFGVTIVTCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYEGHKYILIDKGSFSRGAQINHNLTNSLTGQTWNGPTPKRCAVQRVYLENGNVLQ
Ga0187782_1163543723300017975Tropical PeatlandAAALALVVPATAQAKNVSAFGVSIVSCVVNSNGSNLTNGINIVYYNTHDSPATEVDFLVNYYGHKYILIDKGSFTRGAQINHNLTNALTGQPWNGPTPKRCTVNRVYLANGNVLQ
Ga0210395_1021581613300020582SoilMKRAFGTLAVLLVLVMPAVAQARLGSKYGVTIVSCVVNQGSNGSTNGINVVYYNTHDSPATEVDFLVHYMGHKYILIDKGTFSRGSQINHNLNNALTGQPWNGPTPKNCAVQRVYLANGHSY
Ga0210388_1003846133300021181SoilMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLH
Ga0213873_10000104173300021358RhizosphereMHRPLATVLLLTALVVPATARARNVSRFGVNIISCVVNSNGGNLTNGVNLVYYNTHDSAATEVDFRVNYKGQHYLLIDKGTFTRGAQINHNLTNSLTGQPWYGPAPKLCRVERVYLANGTALY
Ga0213873_1009635423300021358RhizosphereAIFALPASTQAKIVSNLGVTIISCVVNSNGGNLTNGINVVYYNTHDSPATEVDFLLRYMGKRYILIDKGNFTRGAQINHNLTNALTGQPWDGPTPKLCRVERVYLANGRSF
Ga0213872_1036484113300021361RhizosphereMRCALPALTALAIFALPASTQAKIVSNLGVTIISCVVNSNGGNLTNGINVVYYNTHDSPATEVDFLLRYMGKRYILIDKGNFTRGAQINHNLTNALTGQPWDGPTPKLCRVERVYLANGRSF
Ga0213882_1032461423300021362Exposed RockMRRSLAIGLLLAAALAPASAQARLVSRFGVNIVSCVVNSNGANLTNGINVVYYNTHDSPATEVDFLVNYKGSRYLLIDKGTFTRGSQINHNLGNALTGQPWYGPAPKLCRVERVYLANGTTLY
Ga0213877_1021082913300021372Bulk SoilCALPALTALAIFALPASTQAKIVSNLGVTIISCVVNSNGGNLTNGINVVYYNTHDSPATEVDFLLRYMGKRYILIDKGNFTRGAQINHNLTNALTGQPWDGPTPKLCRVERVYLANGRSF
Ga0213877_1022559023300021372Bulk SoilMRRLLLAVAAFAAAIAPAAARNGSAHGVTIVSCVVNSNGSNSTNGINVVYYNTHDSPATEVDFAVNYNGQKYILIDKGSFARGAQINHNLTNSLTGQAWNGPTPKRCAVQRVYLANGNVL
Ga0213874_1002503333300021377Plant RootsMHRPLATVLLLTALVVPATAQARNVSRFGVNIISCVVNSNGGNLTNGVNLVYYNTHDSAATEVDFRVNYKGQHYLLIDKGTFTRGAQINHNLTNSLTGQPWYGPAPKLCRVERVYLANGTALY
Ga0213875_1035800813300021388Plant RootsLTAQARIVSRFGVTIISCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYMGRRYILIDKGTFSRGSQINHNLGNALTGQPWNGPHPKLCRVERVYLANGRSF
Ga0210393_1018915523300021401SoilMKRTLLAVVALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLDNGNVLH
Ga0210387_1020633433300021405SoilMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQIDHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLH
Ga0210387_1185422613300021405SoilMKRAFGTLAVLLVLVMPAVAQARLGSKYGVTIVSCVVNQGSNGSTNGINVVYYNTHDSPATEVDFLVHYMGHKYILIDKGTFTRGSQINHNLNNALTGQPWNGPTPKNCAVQRVYLANGHSY
Ga0210384_1005791323300021432SoilMARALRVLIGLAILIAPLTAQARIVSRFGVTIISCVVNSNGNGQTNGVNVVYYNTHDSPATEVDFLVNYMGRRYILIDKGTFSRGAQINHNLNNALTGQPWNDPNPKLCRVERVYLANGRSF
Ga0213879_1008247023300021439Bulk SoilMKRTLLTLAALAVLVAPAAAAKPLVSAFGVTIVSCVVNSNGSNMTNGINIVYYSTHDSPATEVDFLVNYGGHKYILIDKGNFARGAQINHNLTNALTGQPWNGPTAKRCAVQRVYLENGNVLQ
Ga0213871_1007435013300021441RhizosphereMKRVFLVALAAFLVVASAGAQAKIKDNLGVAIQSCVVNQNGSGQTNGINVVYYNSHESAATEVDFLVRYHGERYILIDRGTFTRGAQINHNLTNSLIGMPWFGPT
Ga0213878_1010964623300021444Bulk SoilMKRTLLILVALCAVAAPANAARNGSRFGVTIVSCVVNSNSSNQTNGINIVYYNTHDSPATEVDFIVSYNGHKYILIDKGTFSRGSQINHNLTNSLTGEPWQGPTPTRCAVQRVYLQNGNVFE
Ga0210390_1054138913300021474SoilMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLQ
Ga0210390_1150400123300021474SoilMQRALLVLVVLATFALPATAQARIVSRYGVTIISCVVNSNGSGQTNGINIVYYNTHDSPATEVDFLVNYLGRRYILIDKGTFSRGAQINHNLINSLTGQTWNGPTPKLCRVERVYLANGRSF
Ga0210398_1011102223300021477SoilMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLDNGNVLH
Ga0126371_1118536323300021560Tropical Forest SoilMNRAFWIFSILIMFVSPATLQAKNGSRHGVTIVSCVVNSNGNNSTNGINVVYYNTHDSPATEVDFMVNYGGHKYILIDHGSFSRGAQINHNLTNALTGEPWDGPQPKLCVVKRVTLADGSVY
Ga0213880_1006599023300021953Exposed RockLKPTLCILALLVAVTPAALQAKNGSKHGVTIVSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFVVNYGGHKYILIDRGSFSRGAQINHNLTNALTGQPWDGPQPKNCAVQRVTLADGSV
Ga0242659_101548713300022522SoilLLHWKIRGHRMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLH
Ga0242669_102945023300022528SoilALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGATAKRCSVQRVYLENGNVLQ
Ga0212123_1002662323300022557Iron-Sulfur Acid SpringMRRALPALVALAIFALPASTQARIVSRFGVTIISCVVNSNGGSSTNGINVVYYNTHDSPATEIDFLVNYLGKRYILIDKGNFTRGAQINHNLTNSLTGQPWDGPAPKLCRVERVYLANGRSF
Ga0242674_101161313300022711SoilLPLLHWKIRGHRMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLH
Ga0242673_101827313300022716SoilLPLLHWKIRGHRMKRTLLAVAALCAIALPATAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAQINHNLTNSLTGQPWNGPTAKRCSVQRVYLENGNVLH
Ga0242675_101879223300022718SoilMPRALRTLAVLAILILPVAAQARNVSRFGVTIVSCVVNSNSNNTTNGINVVFYNTNDSPATEVDFLVHYGGHKYVLIDKGTFTRGSQINHNLTNALTGETWSGPKPKACQVDRVYLENGRSY
Ga0208603_100766133300027109Forest SoilMKRALLTLAALCAVAAPAAAASKNGSAFGVTITSCVVNSNGGSLTNGINVVYYNTHDSPATEVDFAVNYHGHKYILIDKGSFARGAQINHNLANSLTGQPWEGSTPKRCAVQRVYLANGNVLQ
Ga0209218_100051523300027505Forest SoilMKRTLLTFAALCLLAAPAAAAPKSGSAFGVTITSCVVNSNGGNLTNGINVVYYNTHDSPATEVDFLVNYQKHKYILIDKGNFGRGAQINHNLTNALTGQPWEGPTPKKCSVQRVYLANGNVLQ
Ga0209060_1006828023300027826Surface SoilMRRALLALIALAIFALPASTQAKIVSRFGVTIVSCVVNSNGNNLTNGINVVYYNTHDSPATEVDFLVNYLGKRFILIDKGTFTRGAQINHNLTNALTGQAWNGPKPKMCRVERVYLANGRSF
Ga0209060_1018931423300027826Surface SoilMKRTLLFLAALCAVALPAAAARNGSRLGVSIVSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFIVNYGGHKYLMIDRGTFSRGAQINHNLTNALTGQPWDGPTPKRCAVQRVYLQNGNVLQ
Ga0209060_1020600623300027826Surface SoilMKRPLWIFVAIAIAMASPALQAKSASRHGVTIVSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFAVNYGGHKYLLIDRGTFARGAQINHNLTNALTGQPWDGPQPKRCAVQRVTLADGSVY
Ga0209693_1044131723300027855SoilMQRALRALVLLAILVAPTIAQARIVSRFGVTIISCVVNSNGAGLTNGINVVYYNSHDSPAIEVDFLVNYLGRKYLLIDRGTFTRGAQINHNLTNALTGQPWNGSTPKLCRVERVYLANGRTF
Ga0209167_1006391113300027867Surface SoilMRRALPALMALAIFALPASTQARIVSRYGVTIISCVVNSNGGSLTNGINVVYYNTHDSPATEVDFLVNYLGKRFILIDKGNFTRGSQINHNLTNALTGQSWDGPKPKLCRV
Ga0209167_1074149923300027867Surface SoilFVAIAIAMASPALQAKSASRHGVTIVSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFAVNYGGHKYLLIDRGTFARGAQINHNLTNALTGQPWDGPQPKRCAVQRVTLADGSVY
Ga0209380_100000031753300027889SoilMKRALLTFAALCAVAAAPAAASKTGSAYGVTVTSCVVNSNGGNMTNGINVVYYNTHDSPATEVDFLVNYQGHKYILIDKGSFSRGSQINHNLTNSLTGQAWNGPTPKKCAVQRVYLSDGTVLPQRQ
Ga0265326_1011936013300028558RhizosphereKNKKNCSAFGVTVVSCVVNSNGGNTTNGINVVYYNSNDSAATEVDFLVNYAGHKYVMIDKGNFTRGSQINHNLTNSLTGQPWSGPTPKHCAVQRVYLADGNVLQ
Ga0265338_100002381063300028800RhizosphereMKLTLSALAVLCAIILPLSASAKNKKNGSAFGVTVVSCVVNSNGGNTTNGINVVYYNSNDSAATEVDFLVNYAGHKYVMIDKGNFTRGSQINHNLTNSLTGQPWSGPTPKHCAVQRVYLADGNVLQ
Ga0265338_1014550023300028800RhizosphereMKLTLSALAVLCAIILPLTASAKSKKNGSAFGVTIVSCVVNSNGGNTTNGINVVYYNSNDSAATEVDFLVNYAGHKYVLIDKGNFTRGSQINHNLTNSLTGQPWNGATPKHCGVQRVYLADGSVLQ
Ga0265338_1056979923300028800RhizosphereMKRTLLAIAALCAVVAPAAAATKNGSAFGVTIVSCVVNSNGSNQTNGINVVYYNTHDSPATEVDFMVNYLGHKYVMIDKGNFARGAQINHNLTNSLTGQSWNGSTPKRCAVQRVYLENGDVLQ
Ga0308309_1011462933300028906SoilLTAQARIVSRFGVTIISCVVNSNGNGQTNGINVVYYNTHDSPATEVDFLVNYMGRRYILIDKGTFSRGAQINHNLNNALTGQPWNDPNPKLCRVERVYLANGRSF
Ga0265393_116664723300030586SoilGMKRAFGTLAVLLVLVMPAVAQARLGSKYGVTIVSCVVNQGSNGSTNGINVVYYNTHDSPATEVDFLVHYMGHKYILIDKGTFTRGSQINHNLNNALTGQPWNGPTPKNCAVQRVYLANGHSY
Ga0210265_109102113300030605SoilRAFGTLAVLLVLVMPAVAQARLGSKYGVTIVSCVVNQGSNGSTNGINVVYYNTHDSPATEVDFLVHYMGHKYILIDKGTFTRGSQINHNLNNALTGQPWNGPTPKNCAVQRVYLANGHSY
Ga0170834_10761691623300031057Forest SoilMKLTLSALAVLCAILLPLTASAKNKKNGSAFGVTIVSCVVNSNGSNTTNGINVVYFNTNDSSATEVDFLVHYEGHKYVLIDKGNFARGSQINHNLTNALTGQPWNGPTPKHCAVQRVYLADGNVLQ
Ga0170822_1374179523300031122Forest SoilMKLTLSALAVLCAILLPLTASAKNKKNGSAFGVTIVSCVVNSNGSNTTNGINVVYFNTNDSSATEVDFLVHYEGHKYVLIDKGNFARGSQINHNLTNALTGQPWNGPTPKHCAVQRVYSADGSVLQ
Ga0170823_1763978013300031128Forest SoilCAILLPLTASAKNKKNGSAFGVTIVSCVVNSNGSNTTNGINVVYFNTNDSSATEVDFLVHYEGHKYVLIDKGNFARGSQINHNLTNALTGQPWNGPTPKHCAVQRVYLADGNVLQ
Ga0170824_12586212323300031231Forest SoilMKLALSALAVLCAILLPLAASAKNKKNGSAFGVTIVSCAVNSNGNNTTNGINVVYYNSNDSAATEVDFLVNYEGHKYVLIDKGNFSRGSQINHNLTNALTGQAWNGATPKHCGVQRVYLADGNVLQ
Ga0302325_1000572053300031234PalsaVKRTLFFLAALCIVAAPAAAAPKNGSAFGVTIVSCVVNSNGNNSTNGINVVYYSTHDSPATEVDFLVNYKGHKYILIDKGSFARGAQINHNLTNSLTGQPWEGPTPKRCAVQRVYLQDGNVLQ
Ga0265330_1012013013300031235RhizosphereNGSAFGVTIVSCVVNSNGSNQTNGINVVYYNTHDSPATEVDFMVNYLGHKYVMIDKGNFARGAQINHNLTNSLTGQSWNGSTPKRCAVQRVYLENGDVLQ
Ga0265325_1002765633300031241RhizosphereMKRTLLAVAALCAIVAPAAAPAKNTSAFGVTIVSCVVNSNGNNLTNGINVVYYNTHDAPASEVDFLVNYGKQKYVLIDKGNFARGAQINHNLNNALTGQPWDGSKPKRCAVQRVYLVNGDVLQ
Ga0265339_1009765123300031249RhizosphereMKRTLLAIAALCAVVAPAAAATKNGSAFGVTIVSCVVNSNGSNQTNGINVVYYNTHDSPATEVDFMVNYLGHKYVMIDKGNFARGAQINHNLTNSLTGQSWNGS
Ga0170818_11431078523300031474Forest SoilMKLTLSALAVLCAILLPLTASAKNKKNGSAFGVTIVSCVVNSNGNNTTNGINVVYYNSNDSAATEVDFLVNYEGHKYVLIDKGNFSRGSQINHNLTNALTGQAWNGATPKHCGVQRVYLADGNVLQ
Ga0310686_10759133523300031708SoilMKRTLLAAAALCAFALPAAAAKTGSAHGVTITSCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYGGHKYILIDKGSFARGAEINHNLTNALTGQPWNGPTAKRCSVQRVYLENGNVLH
Ga0310686_11347138423300031708SoilMQRALLVLVVFATFALPATAQARIVSRYGVTIISCVVNSNGSGQTNGINIVYYNTHDSPATEVDFLVNYLGRRYILIDKGTFSRGAQINHNLTNSLTGQTWDGPTPKLCRVERVYLANGRSF
Ga0265314_1057676113300031711RhizosphereVLCAIILPLSASAKNKKNGSAFGVTVVSCVVNSNGGNTTNGINVVYYNSNDSAATEVDFLVNYAGHKYVMIDKGNFTRGSQINHNLTNSLTGQPWSGPTPKHCAVQRVYLADGNVLQ
Ga0265342_1042922823300031712RhizosphereNTSAFGVTIVSCVVNSNGNNLTNGINVVYYNTHDAPASEVDFLVNYGKQKYVLIDKGNFARGAQINHNLNNALTGQPWDGSKPKRCAVQRVYLVNGDVLQ
Ga0307476_100000062383300031715Hardwood Forest SoilMRRALFALVALAVFALPATTQAKIVSRFGVTIISCVVNSNGSNLTNGINVVYYNTHDSPATEVDFLVNYLGKRFILIDKGSFTRGAQINHNLANALTGQSWDGPKPKLCRVERVYLANGRSF
Ga0307474_1114705423300031718Hardwood Forest SoilMQRALLVLVVLATFALPATAQARIVSRYGVTIISCVVNSNGSGQTNGINIVYYNTHDSPATEVDFLVNYLGRRYILIDKGTFSRGAQINHNLTNSLTGQTWNGPTPKLCRVERVYLANGRSF
Ga0318546_1035203623300031771SoilMQRALRVLVVFVILIAPLTAQAKIVSRYGVTIVSCVVNNNGSNVTNGINVVYYNTHDSPATEVDFFVNYLGKHYLLIDKGNFTRGSQINHNLTNSLTGEAWNGDRPKLCRVERVYLADGRTF
Ga0307478_1142803813300031823Hardwood Forest SoilMQRALLVLVVLATFALPATAQARIVSRYGVTIISCVVNSNGSGQTNGINIVYYNTHDSPATEVDFLVNYLGRRYILIDKGTFSRGAQINHNLTNSLTGQTWNGPTPKL
Ga0306919_1010660913300031879SoilMQRALRVLVVFVILIAPLTAQAKIVSRYGVTIVSCVVNNNGSNVTNGINVVYYNTHDSPATEVDFFVNYLGKHYLLIDKGNFTRGSQINHNLTNSLTGEAWNGDRPKLCRVERVYL
Ga0310909_1015057123300031947SoilMPMQRALRVLVVFVILIAPLTAQAKIVSRYGVTIVSCVVNNNGSNVTNGINVVYYNTHDSPATEVDFFVNYLGKHYLLIDKGNFTRGSQINHNLTNSLTGEAWNGDRPKLCRVERVYLADGRTF
Ga0318518_1053641123300032090SoilAPLTAQAKIVSRYGVTIVSCVVNNNGSNVTNGINVVYYNTHDSPATEVDFFVNYLGKHYLLIDKGNFTRGSQINHNLTNSLTGEAWNGDRPKLCRVERVYLADGRTF
Ga0311301_1009500933300032160Peatlands SoilMQRALLVLVVLATFALPATAQARIVSRYGVTIISCVVNSNGGSQTNGINVVYYNTHDSAATEIDFLVNYLGHRYILIDKGSFSRGAQINHNLTNALTGQPWDGPTPKLCRVERVYLANGRSF
Ga0335085_1098946523300032770SoilMKRTLLLVAALCIVAAPAVAAKKKNGSAHGVTIVSCVVNSKDNNVTNGINVVYYNTNDSPATEVDFQVAYQGKKYILIDKGTFSRGAQINHNLTNSLTGEQWNGADPKRCAVQRVYLQSGEVLQ
Ga0335082_1044350623300032782SoilMNRALLAVAVLCAILVPATASAKKNGSKFGVTIVSCVVNSKENNQTNGINIVYYNSNDSAATEVDFLVAYGGSKYVMIDKGHFSRGAQINHNLTNALTGQPFDGPTPKRCAVQRVYLEDGSVLK
Ga0335070_1004947723300032829SoilMKRTLLTLAAFGLLAAPAAASKNGSAFGVTITSCVVNSNGNNQTNGINVVYYNSNDSAATEVDFLVNYAGHKYVLIDKGNFSRGSQINHNLTNALTGQAWNGPKPKRCAVQRVYLENGNVLQ
Ga0335075_1025958223300032896SoilMKRALLIFAALGIAAIAPAAASKTGSAYGVTITSCVVNSNGSNMTNGVNVVYYNTHDSPATEVDFLVNYQGHKYILIDKGSFSRGSQINHNLTNSLTGQAWSGPTPKKCAVQRVYLSDGTVLPQRQ
Ga0335071_1044965013300032897SoilRTLLTLAAFGLLAAPAAASKNGSAFGVTITSCVVNSNGNNQTNGINVVYYNSNDSAATEVDFLVNYAGHKYVLIDKGNFSRGSQINHNLTNALTGQAWNGPKPKRCAVQRVYLENGNVLQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.