NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103596

Metagenome / Metatranscriptome Family F103596

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103596
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 76 residues
Representative Sequence MRPLGVTLVGFYQILRGVLSLLFGLSVLLFSGLAAKLASLAAEGNAVERLLRDFGHVAGLGIIVFAVVHMIAGY
Number of Associated Samples 88
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 0.99 %
% of genes from short scaffolds (< 2000 bps) 0.99 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.010 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(15.842 % of family members)
Environment Ontology (ENVO) Unclassified
(24.752 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.594 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 69.61%    β-sheet: 0.00%    Coil/Unstructured: 30.39%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF02687FtsX 33.66
PF11138DUF2911 19.80
PF12704MacB_PCD 14.85
PF13444Acetyltransf_5 0.99
PF01850PIN 0.99



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.01 %
All OrganismsrootAll Organisms0.99 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300018003|Ga0187876_1269479All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium550Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.84%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen11.88%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland6.93%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog6.93%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland5.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.94%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.95%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.95%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.96%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.96%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.98%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.98%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.99%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.99%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.99%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.99%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.99%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.99%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.99%
Drinking Water PipesEngineered → Built Environment → Unclassified → Unclassified → Unclassified → Drinking Water Pipes0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003351Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006872Biofilm microbial communities from drinking water pipes in SingaporeEngineeredOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018003Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300023090Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300027559Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028562Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3EnvironmentalOpen in IMG/M
3300028649Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2EnvironmentalOpen in IMG/M
3300028651Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028678Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029903Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703EnvironmentalOpen in IMG/M
3300029908II_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029918Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1EnvironmentalOpen in IMG/M
3300029988Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030011Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3EnvironmentalOpen in IMG/M
3300030047Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031722II_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033561Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI26346J50198_101317313300003351Bog Forest SoilMRPLGVTLVGFYQILRGILGFLFGLSLLLFTGLAAKLASLAAEGRATGRFFGGFGHVASLVIIGFAVLHLISGYGLLKMQNWSRLLTLFL
Ga0062384_10139757623300004082Bog Forest SoilMRPLGVALVGFYQILRGVLALLFGLSILLFAGLTAKLASMAAEGNAVEHFLRNFGHIAGIGVIVFALIHMIAGYGVLQM
Ga0062389_10230694913300004092Bog Forest SoilMRPLGVTLVGFYQILRGVVGLLFGLSVLLFTGLIARLASLAAEGNAIERLLHGFGHAVGLVIIVFALLH
Ga0062389_10250620913300004092Bog Forest SoilMRPLGVTLVGIYQILRGLIGLLFGLSILLFTGLAARLANLAAESNAAGAFLHGLGRAAGLGVIVFAIVH
Ga0066691_1025593923300005586SoilMRPLGVTLVGCYQILRGVVGLVFGLSILLFTGLAAKLASLAAEGNAVENILHRFGHLAGLGIIVFAIVHMIA
Ga0070762_1044909623300005602SoilMRPLGVTLVGLYQILRGVIGVVFGLSILLFAGLAAKLASLAAEGNAVENILHRFGHLAGLGIIVFAVLHMIAGY
Ga0070762_1078560523300005602SoilMRPLGVTLVGLYQILRGVLGLLFGVSVLLFTGLAAKLSSLAAEGNATGRFFGGFGHFASAMIILFAALHLIAGYGLLRMQNWGRLL
Ga0075017_10061139313300006059WatershedsMRPLGVTLVGFYQILRGVVGILFGLSLMLFTALAAKLASLAAEGNAAGRFFGFGHLVGLVIILFAACHLVAGYGV
Ga0075015_10042842723300006102WatershedsMRPLGVTLVGFYQILRGVVSVVFGLSILLFAGLAAKLTSMAAEGSAVERYMHSLGHVAGLAVIAFGIVRMLAGYGVLQMQNWG
Ga0075015_10099445623300006102WatershedsMRPLGITLIGFYQILRGVLGVLFGLSILLFSGLAAKLASLAAEGNAVENLLRGFGHAAGLGVIVFAA
Ga0070765_10122360513300006176SoilMRPLGVTLVGFYQILRGLLGLLFGLSVLAFTGLTAKLASMAAEGNAVENLLRRFGHAAGLGIIVFAFVHIL
Ga0075021_1036886313300006354WatershedsMRPLGVTLVGFYQILRGVLGLVFGLSLLLFTGLASKLASLAAEGNVTGRFFGGLGHLASLVI
Ga0101947_110450123300006872Drinking Water PipesMRPLGVTLIGIYQILRGILGGLFGLGLLIFTGLAAKLASLAAEGSAAERVLHGFGRAAGLCILALAVFHILAGFGLLKMKNWGR
Ga0116138_120754813300009552PeatlandMRPLGVTLVGFYQILRGLLALLFGLSILLFTGLATKLSALAAEGNATGRFFGGFGHLASAMIILFAALHLIAGYGLLSM
Ga0116105_111799823300009624PeatlandMRPLGVTLVGFYQLLRGVLSLVFGLSIMLFAGLAARLASLAAEGNAVQRLLSDFGRVAGLGIIVFAALHLIAGFGVLQMQNWGRLITLLFSAIGLVLVLPGLV
Ga0116110_124612723300009643PeatlandMRPLGVTLIGFYQILRGVIGLLFGLSVLLFTGLIAKLASLAAEGNAIERLLHGFGHVVGLVIIVFALAHMLAGYGVLQMENWGRLLTLLF
Ga0116106_117787023300009645PeatlandMFGGFMRPLGVTLVGFYQILRGILGLLFGLSLVLFTGLAAKLASLAAEGRATGRFFGGFGHVASLVIILFAVLHL
Ga0116217_1026732123300009700Peatlands SoilMRPLGVTLVGFYQILRGVLGLVFGLSVLLFTGLAAKLASLAAEGNAAENLLRDFGQLAGLIIIVFAVVHMLAGYGVLQMQNWGR
Ga0074044_1115382023300010343Bog Forest SoilMRPLGVTLVGFYQILRGVIGLLFGFCVLLFAGMIAKLASLAAEGNAVERLVHGLGHVAGLVVIVFAVLHLLAGYGVLQMQNWGRLITLLLAAIGLVLVL
Ga0150983_1666632213300011120Forest SoilGGFMRPLGVTLVGFYQILRGILALLFGLSIMLFTGLAAKLASMAAEGNAVENVLRSFGHIAGLESLFLRSYT*
Ga0137391_1081152023300011270Vadose Zone SoilMRPLGVTLVGFYQILRGVLGLVFGLSVLLFSGLAAKLVSLAAEGNAVGSLLHSFGRAAG
Ga0137389_1117819013300012096Vadose Zone SoilMRPLGVTLVGCYQILRGVIGLVFGLSILLFAGLAAKLASLAAEGNAVENVLHRFGHLAGLGIIVFAVVHMIAGYG
Ga0137377_1161862713300012211Vadose Zone SoilMRPLGVTLIGIYQILRGALGVLFGLSLMLFTGLAAKLASLAAEGNSVERVLHSFGSLAGLGIMVFALLHILAGVGLFKMQNW
Ga0137361_1042272013300012362Vadose Zone SoilMRPLGVTLVGFYQILRGIIGLVFGLSILLFAGLAAKLASLAAEGNAVENILHSFGHLAGLGIMVFSVVHMIAGYGVLQMQNWGRL
Ga0137390_1189906413300012363Vadose Zone SoilMRPLGVTLVGCYQTLRGVIGLVFGLSILLFTGLAAKLASLAAEGNAVENILHRFGHLAGLGIIVFAVLHMIAGYGVLQ
Ga0137359_1023306633300012923Vadose Zone SoilMRPLGVTLIGIYQILRGALGVLFGLSLMLFTGLAAKLASLAAEGNSVERVLHSFGSLAGLGIMVFALL
Ga0137359_1061788223300012923Vadose Zone SoilMRPLGVTLVGFYQILRGVLGLVFGLSILLFAGVAAKLASLAAEGHAVENLFRSFGHLA
Ga0137413_1014266623300012924Vadose Zone SoilMRPLGVTLVGAYQILRGALGVLFGLCLLLFTGLAGKLASLASEGNAVGQILHNYGRIAGLGVIAFAILHILSGFGLLKMQNWARLLTLLLS
Ga0137419_1061345913300012925Vadose Zone SoilMRPLGVTLVGFYQILRGVLGLVFGLSILLFAGVAAKLASLAAEGHAVENLFRSFGHLAGL
Ga0137419_1064437313300012925Vadose Zone SoilMRPLGVTLVGAYQILRGALGVLFGLCLLLFTGLAGKLASLASEGNAVGQILHNFGRMAG
Ga0137407_1195801113300012930Vadose Zone SoilMRPLGVTLLGVYQILRGALGVLFGLCLILFTSLASTLAALAADGNAVERVLHGFGRMAGLGVIVFGLLHILAG
Ga0137410_1207076423300012944Vadose Zone SoilMRPFGVTLIGIYQILRGALGVLFGLCLMLFTSLAAKLASLAAEGNAIGNSLHGLGRMAGLAIIAFGFLHILAGFGLFKMENW
Ga0181524_1017325923300014155BogMRPLGVTLVGLYQVLRGLIGLLFGLSVLLFTGLAAKLASLAAEGNAIGRIVHGFGHAAGLVIIVFAVVHMLAGYGVLQMQNWG
Ga0181536_1004438613300014638BogMRPLGVTLVGLYQVLRGLIGLLFGLSVLLFTGLAAKLASLAAEGNAIGRIVHGFGHAAGLVIIVFAVVHMLAGYG
Ga0181505_1009100613300016750PeatlandMRPLGVTLVGLYQVLRGLIGLLFGLSVLLFTGLAAKLASLAAEGNAIGRIVHGFGHAAGLVIIVFAVVHMLAGYGVLQMQNWGRLVTLLFSALGLVLVLPFAVHANIPSVLF
Ga0187801_1004585623300017933Freshwater SedimentMRPLGVTLVGFYQILRGILGLLFGLSLLLFTSLAIKLAALASEGNATGRFFAGFGHLASLVIILFAAVQLLAGYGVL
Ga0187879_1024487613300017946PeatlandMRPLGVTLVGFYQLLRGVLSLVFGLSIMLFAGLAARLASLAAEGNAVQRLLSDFGRVAGLGIIVFAALHLIAGFGVLQMQNWGRLITLLFSAIGLV
Ga0187778_1111642623300017961Tropical PeatlandMRPLGVTVVGFYQILRGVLGILFGLSIMLFTGLAAKLASLAAEGNAIENLLRGFGHLAGLVVIVFAVI
Ga0187782_1094240923300017975Tropical PeatlandMRPLGVTLVGWYQILRGLLSLLFGLCVLLFSGLAAKLVSLAAEGNAVERFLSVSGHAAAFSIMVFAVVHIIGGYGVLQMQNWGRLLALFFSAI
Ga0187876_126947913300018003PeatlandMRPLGVTLVGLYQLLRGAFTLLFGICVLLFAGLIATFASFAAEGNAVARVVHGIGHVGLIIIGFAIVH
Ga0187883_1042181513300018037PeatlandMRPLGVTLVGFYQILRGLLSLLLGLSLLLFSGLAAKLASLAAEGTAVERFMHSAGHVAALSV
Ga0187862_1057793913300018040PeatlandMRPLGVTLVGFYQILRGLLSLLLGLSLLLFSGLAAKLASLAAEGTAVERFMHSAGHVAALSVVVFGLVHILAGYGVLQMQNWGRLLTLFFSALGLMLVLPWL
Ga0187862_1059844523300018040PeatlandMRPLGVTLVGFYQILRGVVALLFGLSILLFAGLAAKLASLAAEGNAIERLLRDFGHVAGVIIIVFAIVHIVAGYSVLQMQNWGRFLTLLFSAIGLVLVLPGL
Ga0187887_1056552513300018043PeatlandMRPLGVTLVGFYQILRGAIGLLFGLSVLLFTGLIAKLASLAAEGDAVERLLHSFGHAVGLVIIVFALAHMLAGYGVLQMENWGRLLALLFSAI
Ga0182031_116280023300019787BogMRPLGVTLVGFYQILRGALSLVFGLSVLLFTGLAAKLASLAAEGNAVERLLRDFGHIAGLGIVVFAVVHMLAGYGVLQMQNWG
Ga0193713_115321923300019882SoilMRPLGVTLVGIYQILRGTLGVLFGLSLMLFTGLAAKLVSLAAEGSALERVLHSLGRMAG
Ga0179592_1010486723300020199Vadose Zone SoilMRPLGVTLVGFYQILRGVIGLVFGLSILLFAGLAAKLASLAAEGNAVENILHSFGHLAGLGIMVFAI
Ga0210390_1022684813300021474SoilMRPLGATLVGFYQILRGVIGVVFGLSVLLFTGLIAKLTSLAAEGSALAQYIQSLGRAAGLVVIVF
Ga0210409_1051464123300021559SoilMRPLGVTLVGCYQILRGVIGLVFGLSILLFTGLAAKLASLAAEGRAVENILHSFGHLAGLGIVVFA
Ga0224558_102782933300023090SoilMRPLPVALIGYYQILRGLISGLFGLSILAFGGLTAKLASLAAEGNAMQRFLSSFGHIAGLIVLVAAALHIAAGYGVLEMQNWGRWLTLLFSAAGLVILLPFL
Ga0208686_101191733300025500PeatlandMRPLGVTLVGFYQILRGILGLLFGLSLVLFTGLAAKLASLAAEGRATGRFFGGFGHVASLVIILFAVL
Ga0208188_111136113300025507PeatlandMRPLGVTLVGFYQILRGILGLLFGLSLVLFTGLAAKLASLAAEGRATGRFFGGFGHVASLVIILFAVLHL
Ga0209158_134014513300026333SoilMRPLGVTLVGCYQILRGVVGLVFGLSILLFTGLAAKLASLAAEGNAVENILHRFGHLAGLGIIVFAIVHMIAGYGVLQMQ
Ga0257172_100829213300026482SoilMRPLGVTLLGLYQILRGVIGVVFGLSILLFAGLAAKLASLAAEGNAVENILHRFGHLAGLGIIVFAVGHMIAGYGV
Ga0209222_105646623300027559Forest SoilMRPLGVTLVGFYQILRGVLDLLFGASVLLFTGLAAKLSSLAAEGNATGHFFGGFGHLASAMIILFAALHLVAGYGLLSM
Ga0209220_109087013300027587Forest SoilMRPLGVTLVGLYQILRGVIGVVFGLSILLFAGLAAKLASLAAEGNGVENILHRFGHLAGLGIIVFAVLHM
Ga0209117_110122823300027645Forest SoilMRPLGVTLVGLYQILRGVIGVVFGLSILLFAGLAAKLASLAAEGNGVENILHRFGHLAGLGIIVFAVVHLIAG
Ga0209040_1039435023300027824Bog Forest SoilMRPLGVTLVGYYQILRGIIGLLFGLSVLLFAGMVAKLASLAAEGNAIQRYVHGLGHAAG
Ga0209517_1048858223300027854Peatlands SoilMRPLGVTLVGFYQILRGVLGLVFGLSVLLFTGLAAKLASLAAEGNAAENLLRDFGQLAGLIIIVFAVVHM
Ga0209701_1045548023300027862Vadose Zone SoilMRPLGVTLVGCYQILRGVIGLVFGLSILLVAGLAAKLASLAAEGNAIGNILHRFGHLAGLGIIVFAVVHMIAGYGV
Ga0209701_1059553013300027862Vadose Zone SoilMRPLGVTLVGFYQILRGVLGLVFGLSVLLFSGLAAKLVSLAAEGNAVGSLLHSFGRVAGLGIIVFAVVHMVAGYGVLQMQN
Ga0209275_1005155233300027884SoilMRPLGATLVGFYQILRGVIGVVFGFSILLFTGLIAKLTSLAAEGSALAQYIQSFGRAAGLVVIVFGIVHMVAGYGVLRMQNWGRLL
Ga0209275_1059153613300027884SoilMRPLGVTLVGLYQILRGVLGLLFGVSVLLFTGLAAKLSSLAAEGNATGRFFGGFGHFASAMIILFA
Ga0209380_1028266213300027889SoilMRPLGVTLVGLYQILRGVIGVVFGLSILLFAGLAAKLASLAAEGNAVENILHRFGHLAGL
Ga0209488_1050104923300027903Vadose Zone SoilMRPLGVTLVGFYQILRGVLGLVFGLSILLFAGVAAKLASLAAEGHAVENLFRSFGHLAGLGIIVFA
Ga0302151_1001989513300028562BogMRPLGVTLVGFYQILRGALSLVFGLSVLLFTGLAAKLASLAAEGNAVERLLRDFGHIAGLGIV
Ga0302162_1017037413300028649FenMRPLGVTLIGIYQILRGALGVLFGLSLLLFTSLAAKLASLAAEGNAIERMLHSLGRMAGLGIIVFALFHLIA
Ga0302171_1012274723300028651FenMRPLGVTLIGIYQILRGALGVLFGLSLLLFTSLAAKLASLAAEGNAIERMLHSLGRMAGL
Ga0257175_103157923300028673SoilMRPLGVTLVGFYQILRGVLGLVFGLSVLLFSGLAAKLVSLAAEGNAVGSLLHSFGRAAGLGIIVFAVLHMVAGYGV
Ga0302165_1018363423300028678FenMRPLGVTLIGFYQILRGVLGVVFGLSLMAFTGLAAKLASLAAEGNAVQRLLSSLGHIAGVGVIVFALAHMLAGYGVLQMENWGRLITLLFSAIGLVAVLPGLV
Ga0302224_1026934923300028759PalsaMRPLGVTLVGFYQILRGVIGLLFGFSVLLFTGLVAKVTSMAAEGNAIERLLHGFGHVVGIVILAFAVVHMIAGYGV
Ga0302222_1040250313300028798PalsaMRPLGVTLVGLYQILRGVVGLLFGLSVLLFTGLIAKFASLAAEGNAIERLLHGFGHAVGLVIIVFALLHLLAA
Ga0247271_11523623300029903SoilMRPLGVTLVGFYQILRGLLSLLLGLSLLLFSGLAAKLASLAAEGTAVERFMHSAGHVAALSVVVFGLVHILAGYGVLQMQNWGRLLTLFFSALGLMLVLPWLVHAHLPSLFF
Ga0311341_1000948613300029908BogMRPLGVTLVGIYQILRGIIGVIFGLSILLFTGMVTKLAGVAAEGNALGGFLHGLGRATGLGIIVFAVIHILAGYGVLQTQ
Ga0311361_1028342813300029911BogMRPLGVTLVGIYQILRGIIGVIFGLSILLFTGMVTKLAGVAAEGNALGGFLHGLGRATGLGIIVFAVIHILAG
Ga0302143_105659713300029918BogMRPLGVTLVGIYQILRGIIGVIFGLSILLFTGMVTKLAGVAAEGNALGGFLHGLGRATGLGIIVFAVIH
Ga0302190_1001921743300029988BogMRPLGVTLVGFYQILRGALSLVFGLSVLLFTGLAAKLASLAAEGNAVERLLRDFGHIAGLGIVVFAVVHMLAGYGVLQMQNWGR
Ga0311339_1022034013300029999PalsaMRPLGVTLVGLYQILRGAIGLLFGLSILVFTGLLSKLTAMAAEGGALERSVHGLGHIAGLIVIVFAVIHMIAGYGVLQMQNWGRLL
Ga0311339_1081574023300029999PalsaMRPLGVTLVGLYQILRGVVGLLFGLSVLLFTGLIAKFASLAAEGNAIERLLHGFGHAVGLVII
Ga0302270_1033924223300030011BogMRPLGVTLVGLYQILRGLLGLLFGLSVLFFTGLVARLAGVAAEGNALGGFLHGLGRVTGLGILA
Ga0302286_1043175013300030047FenMRPLGVTLIGFYQILRGVLGVVFGLSLMAFTGLAAKLASLAAEGNAVQRLLSSLGHIAG
Ga0311372_1048957933300030520PalsaMRPLGVTLVGFYQILRGAIGLLFGLSILVFTGLLSKLTAMAAEGGALERSVHGLGHIAGLIVIVFAVIHMIAGYGVLQ
Ga0316363_1008883313300030659Peatlands SoilMRPLGVTLVGFYQILRGVLSLLFGVSLMLFSGLAAKLASLAAEGNAVERFMHSTGHVAG
Ga0316363_1043013813300030659Peatlands SoilMRPLGVTLVGVYQILRGVLGLLFGLSLLLFTSLAVKLAALASEGNATGRFFAGFGHLASLVI
Ga0311345_1025446023300030688BogMRPLGVTLVGLYQILRGLLGLLFGLSVLLFTGLVARLAGVAAEGNALGGFLHGLGRVTGLGILAFAVIHILAGY
Ga0311366_1103997023300030943FenMRPLGVTLIGIYQILRGALGVLFGLSLLLFTSLAAKLASLAAEGNAIERMLHSLGRMAGLGIIVFALFHLMAGFGL
Ga0311366_1111511713300030943FenMRPLGVTLVGFYQILRGVLSLLFGLSVLLFSGLAAKLASLAAEGNAVERLLRDFGHVAGLGIIVFAVVHMIAGY
Ga0170824_11626132613300031231Forest SoilMRPLGVTLVGCYQILRGVIGLAFGLSILLVAGLAAKLASWAAEGNAIGNILHGFGHLAGLGIIVFAVVHMIAGYGVLQMQNWGR
Ga0302323_10203154913300031232FenMRPLGVTLVGFYQILRGVLSLLFGLSVLLFSGLAAKLASLAAEGNAVERLLRDFGHVAGLGIIVFAVVHMI
Ga0265340_1027977913300031247RhizosphereMRPLGVTLVGFYQILRGVLSILFGLSIIAFTGLAAKLASMAAEGNAVERLLSSFGHIA
Ga0311364_1011565513300031521FenMRPLGVTLIGFYQILRGVLGVVFGLSLMAFTGLAAKLASLAAEGNAVQRLLSSLGHIAGVGVI
Ga0311351_1016168713300031722FenMRPLGVTLIGFYQILRGVLGVVFGLSLMAFTGLAAKLASLAAEGNAVQRLLSSLGHIAGVGVIVFALAHMLAGYGVLQMENWGRLITLLFSAIGLVAVLPGLVHMHK
Ga0302321_10061118513300031726FenMRPLGVTLIGIYQILRGALGVLFGVSLLLFTSLAAKLASLAAEGNAIERMLHSLGRMAGLGIIVFALFHLMAGFG
Ga0302321_10140573813300031726FenMRPRGVTLVGLYQMLRGAIALLFGVCVLLFTGLAAKLASVAAEGNAVGRVVHGLGHANGLVIIGFA
Ga0307477_1112173923300031753Hardwood Forest SoilMRPLGVTLVGFYQILRGILGLLFGVSILLFTGLAAKLSSLAAEGNATGRFFGGFGHLASAMIILFAVLHLIAGYGLLTMQNWGR
Ga0307473_1048079113300031820Hardwood Forest SoilMRPLGVTLIGIYQILHGALGVLFGLSLMLFTGLAAKLAFLAAEGNAAGRVLHSLGSLAGLGIMVFALLHMLAGFGLLKMQNWGR
Ga0311367_1072493213300031918FenMRPLGVTLIGFYQILRGVLGVVFGLSLMAFTGLAAKLASLAAEGNAVQRLLSSLGHIAGVGVIVFALAH
Ga0307471_10075336213300032180Hardwood Forest SoilMRPLGVTLIGIYQILHGALGVLFGLSLMLFTGLAAKLASLAAEGNAAERVLHSLGSLAGL
Ga0307471_10266322513300032180Hardwood Forest SoilMRPLGVTLVGFYQILRGILGLLFAVSILLFAGLAAKLAALAAEVNTTGRFFGGFGHLASLVIIVFAALHLIAGYGVLGIH
Ga0307472_10157722313300032205Hardwood Forest SoilMRPLGVTLVGFYQILRGVLGLVFGLSVLLFSGLAAKLVSLAAEGNAVGSLLHSFGRAAGLGIIVFAVV
Ga0371490_112914713300033561Peat SoilMRPLGVTLVGFYQILRGVIALLFGLSILLFAGLAAKLASLAAEGNAIERLLRDFGHVAGVIVIVFAIVHML


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.