Metagenome / Metatranscriptome Family F103594

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103594
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	78 residues
Representative Sequence	TADGKTHFKGAIMRAGVPDNWKDVVPLYAHIGDKTVKMGTLGVTHASEPIDFTIPGKIDRVSINDYEDLLAEVKQ
Number of Associated Samples	88
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.99 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	85.15 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.099 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.782 % of family members)
Environment Ontology (ENVO)	Unclassified (33.663 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.376 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 39.81% Coil/Unstructured: 60.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01641	SelR	60.40
PF01523	PmbA_TldD	14.85
PF00072	Response_reg	1.98
PF17148	DUF5117	1.98
PF13545	HTH_Crp_2	0.99
PF07228	SpoIIE	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	60.40
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	14.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.10 %
Unclassified	root	N/A	9.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.10 %
Unclassified	root	N/A	9.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.10 %
Unclassified	root	N/A	9.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.23 %
Unclassified	root	N/A	9.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	40.59 %
Unclassified	root	N/A	9.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.76 %
Unclassified	root	N/A	9.90 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	8.91 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	7.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.76 %
Unclassified	root	N/A	9.90 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	8.91 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	7.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10004578	All Organisms → cellular organisms → Bacteria → Acidobacteria	3745	Open in IMG/M
3300002917\|JGI25616J43925_10167243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	869	Open in IMG/M
3300004080\|Ga0062385_10034135	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300004114\|Ga0062593_101843343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300005175\|Ga0066673_10059979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1945	Open in IMG/M
3300005186\|Ga0066676_10512746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	814	Open in IMG/M
3300005467\|Ga0070706_100104125	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300005467\|Ga0070706_100917229	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300005534\|Ga0070735_10012164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6519	Open in IMG/M
3300005545\|Ga0070695_100495303	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300005547\|Ga0070693_100130188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1572	Open in IMG/M
3300005556\|Ga0066707_10554368	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300005591\|Ga0070761_10025515	All Organisms → cellular organisms → Bacteria	3296	Open in IMG/M
3300005610\|Ga0070763_10052717	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300006052\|Ga0075029_100698554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	684	Open in IMG/M
3300006176\|Ga0070765_101384704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300006755\|Ga0079222_10937662	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300010321\|Ga0134067_10417839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300010322\|Ga0134084_10143466	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300010337\|Ga0134062_10530105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300010341\|Ga0074045_10970295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010375\|Ga0105239_11842875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	701	Open in IMG/M
3300010376\|Ga0126381_101016310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1196	Open in IMG/M
3300010379\|Ga0136449_103843308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300010401\|Ga0134121_10001962	All Organisms → cellular organisms → Bacteria	18362	Open in IMG/M
3300010401\|Ga0134121_12294605	Not Available	578	Open in IMG/M
3300011120\|Ga0150983_12252678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5059	Open in IMG/M
3300011120\|Ga0150983_12264606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300011270\|Ga0137391_10113697	All Organisms → cellular organisms → Bacteria → Acidobacteria	2348	Open in IMG/M
3300012096\|Ga0137389_10290104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1383	Open in IMG/M
3300012189\|Ga0137388_11146069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300012200\|Ga0137382_10585377	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300012202\|Ga0137363_11679194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300012203\|Ga0137399_10372915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1187	Open in IMG/M
3300012209\|Ga0137379_10486346	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300012209\|Ga0137379_11644805	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300012361\|Ga0137360_10402464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300012363\|Ga0137390_10299688	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300012683\|Ga0137398_10211104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1283	Open in IMG/M
3300012924\|Ga0137413_10141277	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300012925\|Ga0137419_11405070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300012927\|Ga0137416_11474482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	617	Open in IMG/M
3300012927\|Ga0137416_12035864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012931\|Ga0153915_10153214	All Organisms → cellular organisms → Bacteria	2500	Open in IMG/M
3300012944\|Ga0137410_11239554	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300012960\|Ga0164301_10038327	All Organisms → cellular organisms → Bacteria → Acidobacteria	2363	Open in IMG/M
3300017927\|Ga0187824_10386366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300020579\|Ga0210407_10931095	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300020580\|Ga0210403_10487379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300020582\|Ga0210395_10867559	Not Available	671	Open in IMG/M
3300020582\|Ga0210395_11385193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300021046\|Ga0215015_10715590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	693	Open in IMG/M
3300021086\|Ga0179596_10141102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1138	Open in IMG/M
3300021088\|Ga0210404_10573949	Not Available	640	Open in IMG/M
3300021170\|Ga0210400_11169990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300021401\|Ga0210393_10153396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1852	Open in IMG/M
3300021401\|Ga0210393_10167317	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1770	Open in IMG/M
3300021403\|Ga0210397_10637387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300021407\|Ga0210383_10760072	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300021420\|Ga0210394_10132874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2157	Open in IMG/M
3300021420\|Ga0210394_10290669	All Organisms → cellular organisms → Bacteria → Acidobacteria	1433	Open in IMG/M
3300021474\|Ga0210390_10487094	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300021478\|Ga0210402_10630220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	993	Open in IMG/M
3300021478\|Ga0210402_11486746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300022529\|Ga0242668_1135898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	530	Open in IMG/M
3300024279\|Ga0247692_1079241	Not Available	517	Open in IMG/M
3300024290\|Ga0247667_1097822	Not Available	540	Open in IMG/M
3300025939\|Ga0207665_11690859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300026281\|Ga0209863_10199983	Not Available	579	Open in IMG/M
3300026515\|Ga0257158_1105764	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300026528\|Ga0209378_1274013	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300026530\|Ga0209807_1037091	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300026551\|Ga0209648_10000904	All Organisms → cellular organisms → Bacteria → Acidobacteria	23617	Open in IMG/M
3300026551\|Ga0209648_10229117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1393	Open in IMG/M
3300027635\|Ga0209625_1092062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	680	Open in IMG/M
3300027667\|Ga0209009_1028136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1380	Open in IMG/M
3300027701\|Ga0209447_10218054	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300027729\|Ga0209248_10106109	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300027729\|Ga0209248_10255214	Not Available	510	Open in IMG/M
3300027795\|Ga0209139_10335131	Not Available	530	Open in IMG/M
3300027821\|Ga0209811_10027543	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300027829\|Ga0209773_10057809	All Organisms → cellular organisms → Bacteria → Acidobacteria	1572	Open in IMG/M
3300027853\|Ga0209274_10145211	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300027875\|Ga0209283_10615822	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300027875\|Ga0209283_10873585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	546	Open in IMG/M
3300027879\|Ga0209169_10699009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300027903\|Ga0209488_10706483	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300027905\|Ga0209415_10003844	All Organisms → cellular organisms → Bacteria → Acidobacteria	27781	Open in IMG/M
3300027986\|Ga0209168_10050869	All Organisms → cellular organisms → Bacteria → Acidobacteria	2216	Open in IMG/M
3300028065\|Ga0247685_1045114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300028138\|Ga0247684_1043947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300028800\|Ga0265338_10569922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	791	Open in IMG/M
3300029636\|Ga0222749_10742811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300031240\|Ga0265320_10483405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300031715\|Ga0307476_10722619	Not Available	737	Open in IMG/M
3300031718\|Ga0307474_10457724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	998	Open in IMG/M
3300031720\|Ga0307469_10489308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300031753\|Ga0307477_10608191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	736	Open in IMG/M
3300032180\|Ga0307471_100216340	All Organisms → cellular organisms → Bacteria → Proteobacteria	1934	Open in IMG/M
3300032180\|Ga0307471_104135990	Not Available	512	Open in IMG/M
3300032205\|Ga0307472_100251802	All Organisms → cellular organisms → Bacteria → Acidobacteria	1385	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.03%
Host-Associated	Host-Associated	2.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.12%
Aquatic	Environmental → Aquatic	8.91%
Plants	Host-Associated → Plants	2.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.12%
Freshwater	Environmental → Aquatic → Freshwater	7.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.97%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.29%
Loam	Environmental → Terrestrial → Soil → Loam	14.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.98%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_100045783	3300002907	Grasslands Soil	HTPDGKTHVKGEVTRSGVPDMWKDVIPLYAHAGDKTMRLGTLSVTHPTEPLDLTLPLQVDRLSINDHEDLLAVVKQ*
JGI25616J43925_101672432	3300002917	Grasslands Soil	VYGTGIPHYNFRVSLEPAADGKTHVKGEITHTGVPDSWKDVIPLYAHLGDKTLRLGTLAITHATEPFEFVVPLKVDRLSINDHEDLLADVKX*
Ga0062385_100341351	3300004080	Bog Forest Soil	EATPDGKTKVKGEFSRSGVPENWKDNVPIYAHIGEKTIRLGSVGVMHSTAPFEAILPGKIDRISINDYEDLLADVKQ*
Ga0062593_1018433432	3300004114	Soil	FHVTTEATADGKTHFKGAITRAGVKDNWKDVVPLYAHMGDKTVKMGTIGVTHASEPFDFTIPGKIDRVSINDYEDLLAEVKQ*
Ga0066673_100599792	3300005175	Soil	PDGKTHVKGELTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKIDRVSINDYEDLLADVKE*
Ga0066676_105127462	3300005186	Soil	LTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKVDRVSINDYEDLLADVKQ*
Ga0070706_1001041253	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	YTFHVTMEATADGKTHFKGAITRAGVKDNWKDVVPLYAHMGDKTVKMGTIGVTHASEPFDFTIPGKIDRVSINDYEDLLAEVKQ*
Ga0070706_1009172292	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SHLKGDITRTGVPDGWKDVIPLYAHVGDKTLRLGTFSVTHSNEPLDLMLPLKADRLSINDHEDLLAEVKQ*
Ga0070735_100121641	3300005534	Surface Soil	ADGKTHIKGEITRAGVPDNWKDAVPLYAHIGDKTVKMGLISITRANEPFDFAIQGKIDRVSINDFEDLLAEVKQ*
Ga0070695_1004953032	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	DGKTHFKGAIMRAGVPDNWKDVVPLYAHIGDKTVKMGTLGVTHASEPIDFTIPGKIDRVSINDYEDLLAEVKQ*
Ga0070693_1001301882	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	HYTFRANLEHTPDGKTHIKGEITRSGVPDTWKDVVPLYAHAGDKTMRLGTLSVIHATEPLDVILAAQIDRVSINDHEDLLADVKQ*
Ga0066707_105543682	3300005556	Soil	GKTHVKGELTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKVDRVSINDYEDLLADVKQ*
Ga0070761_100255151	3300005591	Soil	DGKTHIKGEITRAGVSDAWKDAVPLYAHIGDKTVKMGLISVTRANEPFDFLIPGKIDRVSINDFEDLLAEVKQ*
Ga0070763_100527171	3300005610	Soil	FRSTTEATADGKTRIKGEIARAGVSGTWKDAVPLYAHIGDKTVKMGLIPVTHANEPFDFLIPGKIDRVSINDFEDLLAEVKQ*
Ga0075029_1006985541	3300006052	Watersheds	THLKGEISRSGVADTWKDVVALYAHQGDKTLRLGTLSVSHANQPLDITLPGKIDRVSINDYEDLLADVKQ*
Ga0070765_1013847041	3300006176	Soil	NQYVYGTGEAQYTFHSAAEATDGKTHIKGEITRAGVPDNWKDAVPLYAHIGDKTVKMGLISVTHATEPFDFLIPGKIDRVSINDNEDLLAEVKQ*
Ga0079222_109376622	3300006755	Agricultural Soil	TEATADGKTHIKGEITRSGVTDNWKDVVPLYAHIGPKTIKMGTIGVTHASEPIDFTVAGKIDRVSINDYEDLLADVKQ*
Ga0134067_104178392	3300010321	Grasslands Soil	YGTGIPQYHFHAITEATPDGKTHLKAELVRTGVPDGWKDVVPVYAHMGDKMMRLGVISATHSTEPLDAIVPAKIDRLTINDREDLLADVKQ*
Ga0134084_101434661	3300010322	Grasslands Soil	RELTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKIDRVSINDYEDLLADVKE*
Ga0134062_105301051	3300010337	Grasslands Soil	VYGTGIPQYSFHTSVEATPDGKTHVKGELTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKIDRVSINDYEDLLADVKQ*
Ga0074045_109702952	3300010341	Bog Forest Soil	GEAQYTFHATTEATADGKTHIKGSIGRAGVPDNWKDAVPLYAHIGDKTVKMGLIGVSKANEPFDFTIPGKIDRVSINDYEDLLADVKQ*
Ga0105239_118428751	3300010375	Corn Rhizosphere	TQATPDGKTRITGQLVRTGVPEGWKDDVPIYAHVGDKVIRMGSLAATHSTEPLDAVVPAKIDRVTINEHEDLLADVHQ*
Ga0126381_1010163101	3300010376	Tropical Forest Soil	AEGKTHFKVELTRTGVPDSWKDVIPLYAHIGDKTIKMGNMRVTHPTETVDTTIQGKIDRVSINDYEDLLAEVKQQ*
Ga0136449_1038433081	3300010379	Peatlands Soil	NQYVYGMGEAQYTFHSTAEAAADGKMHLKGEITRAGVPDTWKDAVPLYAHVGDKTVKMGLISVTHATEPFDFIIPGKIDRVSINDFEDLLAEVKQ*
Ga0134121_100019621	3300010401	Terrestrial Soil	MEATADGKTHFKGAITRAGVQDNWKDVVPLYAHMRDKTVKMGTIGVTHASEPFDFTIPGKIDRVSINDYEDLLAEVKQ*
Ga0134121_122946051	3300010401	Terrestrial Soil	TADGKTHFKGAIMRAGVPDNWKDVVPLYAHIGDKTVKMGTLGVTHASEPIDFTIPGKIDRVSINDYEDLLAEVKQ*
Ga0150983_122526785	3300011120	Forest Soil	GMGEAQYTFHATAEATTDGKTHIKGEITRAGVPNSWKDAVPLYAHIGDKTVKMGLISITHASEPFDFAIPGKIDRVSINDYEDLLAEVKQ*
Ga0150983_122646061	3300011120	Forest Soil	TGEAQYTFRATAESTADGKTHIKGEFARAGVPDNWKDAVPLYAHIGDKTVKMGLISVSHADERFDFLIPGKIDRVSINDFEDLLAEVKQ*
Ga0137391_101136971	3300011270	Vadose Zone Soil	ATPDGKTHIKGQLTRSGVPETWKDAVPLYAHMGDKTIRLGTLASTHSSEPLDVILPVKIDRVSINDYEDMLADVKQ*
Ga0137389_102901041	3300012096	Vadose Zone Soil	THIKGELTRTGVPDNWKDAIPLYAHMGDKTLRLGTLAVTHATEPIDVTLPVKIDRLSINDHEDLLADVKQ*
Ga0137388_111460692	3300012189	Vadose Zone Soil	YVYGTGIPQYNFHASVEATPDGKTHIKGELTRSGVPETWKDAIPLYAHVGDKTIRLGSLASTHSSEPLDVTLAAKIDRVSINDYEDMLADVKQ*
Ga0137382_105853771	3300012200	Vadose Zone Soil	KTHVKGEITRAGVPDNWKDVIPLYAHVGDKTMRIGTLSVTHPNEPLDLTLPLKVDRLSINDHEDLLAEVKQ*
Ga0137363_116791942	3300012202	Vadose Zone Soil	YGTGIPHYSFRASLEATADGKTHVKGELTRTGVPDNWQDVIPIYAHTGDKAMRLGTLSVRHATEPIDVTLPAKIDRLSINDHEDLLADVKQ*
Ga0137399_103729151	3300012203	Vadose Zone Soil	KSHLKGEITRTGVPETWKDVVPLYAHLGEKALRLGVLSVTHSREPIDVTIPAKIDRVSINDYEDLLADVKQ*
Ga0137379_104863463	3300012209	Vadose Zone Soil	PDGKTHIKGQLTRSGVPETWKDAVPLYAHMGDKTIRLGTLAATHSSDPLDVILPVKIDRVSINDYEDMLADVKQ*
Ga0137379_116448051	3300012209	Vadose Zone Soil	PDGKTHIKGQLTRSGVPETWKDAVPLYAHMGDKTIRLGTLASTHSSEPLDVILPVKIDRVSINDYEDMLADVKQ*
Ga0137360_104024641	3300012361	Vadose Zone Soil	NFHASVEATPDGKTHIKGEVTRSGVPDTWKDAIPLYAHMGDKTARLGMLSITHPSAPLDITLPAKIDRVSINDYEDLLAEVKQ*
Ga0137390_102996881	3300012363	Vadose Zone Soil	SFRASLEPTADGKTHIKGELTRTGVPDNWKDAIPLYAHMGDKTLRLGTLAVTHATEPIDVTLPVKIDRLSSNDHEDLLADVKQ*
Ga0137398_102111043	3300012683	Vadose Zone Soil	ADGKTHVKGEITRAGVPDNWKDVIPLYAHVGDKTLRIGTLSVTHPNEPLDLMLPLKADRLSINDHEDLLAEVKQ*
Ga0137413_101412771	3300012924	Vadose Zone Soil	YTFRASLDTTTNGKSHMKGEITRAGVPDNWKDVIPLYAHVGDKTLRIGTLSVTHPNEPLDLMLPLKADWLSINDHEDLLAEVKQ*
Ga0137419_114050701	3300012925	Vadose Zone Soil	RASLDTTANGKSHMKGEITRAGVPDNWKDVIPLYAHVGDKTLRIGTLSVAHPNEPLDLMLPLKADRLSINDHEDLLAEVKQ*
Ga0137416_114744822	3300012927	Vadose Zone Soil	PETWKDVVPLYAHVGEKALRLGVLSVMHSREPIDVTIPAKIDRVSTNDYEDLLADVKQ*
Ga0137416_120358641	3300012927	Vadose Zone Soil	AADGKTHVKGEITHTGVPDSWKDVIPLYAHLGDKTLRLGTLAITHATEPFEFVVPLKVDRLSINDHEDLLADVKQ*
Ga0153915_101532143	3300012931	Freshwater Wetlands	MTPEGKTHVKGQLTRSGAPDTWKDSVPLYVHMGDKTIRVGSIAATHPSESVEYLVPAKVDRISINDNEDLLADVKQ*
Ga0137410_112395541	3300012944	Vadose Zone Soil	ITRAGVPETWKDVVPLYAHLGDKALRLGVLSVTHSHEPIDVVIPAKIDRVSINDYEDLLADVKQ*
Ga0164301_100383271	3300012960	Soil	TMEATADGKTHFKGAITRAGVQDNWKDVVPLYAHMGDKTVKMGTIGVTHASEPFDFTIPGKIDRVSINDYEDLLAEVKQ*
Ga0187824_103863662	3300017927	Freshwater Sediment	HATTEATADGKTHIKGAIDRAGVPDTWKDAIPLYAHIGDKTVKMGLISASHASEPFDFAIPGKIDRVSINDYEDLLAEVKQ
Ga0210407_109310952	3300020579	Soil	PNGKSHLKGDITRTGVPDDWKDVIPLYAHVGDKTLRIGTLSVTHPNEPLDLMLPLKADRLSINDHEDLLAEVKQ
Ga0210403_104873791	3300020580	Soil	YTFHATAEATTDGKTHIKGEITRAGVPDSWKDAVPLYAHIGDKTVKMGLISITHASEPFDFAIPGKIDRVSINDYEDLLAEVKQ
Ga0210395_108675591	3300020582	Soil	TAEATTDGKTHIKGEITRAGVPDSWKDAVPLYAHIGDKTVKMGLISIKHASEPFDFAIPGKIDRVSINDYEDLLAEVKQ
Ga0210395_113851932	3300020582	Soil	PAYAFRASAEPTADGKTHLKGQITRTGVPENWKDVIPLYAHTGEKTFRLGAISVTHSTELLDAVVNAKIDRVSINENEDLLADIKQ
Ga0215015_107155901	3300021046	Soil	RTGVPENWKDVVPLYAHIGDKTMRLGTLSATHPTETVDATVPARIDRISINDHEDLLADVKQ
Ga0179596_101411021	3300021086	Vadose Zone Soil	HTGVPDSWKDVIPLYAHLGDKTLRLGTLAITHATEPFEFVVPLKVDRLSINDHEDLLADVKQ
Ga0210404_105739492	3300021088	Soil	DGKTHIKGEITRAGVPDSWKDAVPLYAHIGDKTVKMGLISIKHASEPFDFAIPGKIDRVSINDYEDLLAEVKQ
Ga0210400_111699902	3300021170	Soil	PEYTFHVSAEPTPDGKTHLKGQITRTGVPENWKDVIPIYAHMGDKTIRLGGISVSHSTEPLDVVANAKIDRVSINENEDLLADVKQ
Ga0210393_101533963	3300021401	Soil	YTFHAGTEATADGKTHVTGEITRSGVPDTWKDAVPLYAHIGDKTVKMGLISMTHASEPLDFVIPGKIDRVSINDFEDLLAEVKQ
Ga0210393_101673173	3300021401	Soil	HIKGEITRAGVPDSWKDAVPLYAHIGDKTVKMGLISIKHASEPFDFAIPGKIDRVSINDYEDLLAEVKQ
Ga0210397_106373871	3300021403	Soil	ATTEGTPDGKTHIKGEIARAGVPDTWKDAVPLYAHIGDKTVKMGLISATHASSPFDFAIVGKIDRVSINDFEDLLAEVKQ
Ga0210383_107600722	3300021407	Soil	TTEGTPDGKTHIKGEIARAGVPDTWKDAVPLYAHIGDKTVKMGLISATHASSPFDFAIAGKIDRVSINDFEDLLAEVKQ
Ga0210394_101328741	3300021420	Soil	AQYTFHATAEATTDGKTHIKGEITRAGVPDSWKDAVPLYAHMGDKTVKMGLISITHASEPFDFAIPGKIDRVSINDYEDLLAEVKQ
Ga0210394_102906693	3300021420	Soil	GISQYTFRSTAEATPDGKTRLKAELTRTGVPGTWKDVVPIYGHVGDKSMRLGSISAKHAVETIDVTLPGKVDRLTINDFDDLLVDVKQ
Ga0210390_104870943	3300021474	Soil	ITRAGVPDSWKDAVPLYAHIGDKTVKMGLISIKHASEPFDFAIPGKIDRVSINDYEDLLAEVKQ
Ga0210402_106302201	3300021478	Soil	HYDFRVSLEPTADGKTHVKGEITRAGVTDGWKDVIPLYAHSGDKTLRLGTLAIMHATEPFDFTLPLKVDRLSINDHEDLLADVKQ
Ga0210402_114867461	3300021478	Soil	ATTEATPDGKTHVKGEIDRAGVPETWKDAISLYAHIGDKTIKMGLIGVTKANQPFDFTVAGKIDRVTINDFEDLLADVKQ
Ga0242668_11358982	3300022529	Soil	ADGKTHVKGEITRAGVTDGWKDVIPLYAHSGDKTLRLGTLAITHATEPFDFTLPLKVDRLSINDHEDLLADVKQ
Ga0247692_10792411	3300024279	Soil	MEATADGKTHFKGAITRAGVQDNWKDVVPLYAHMGDKTVKMGTIGVTHASEPFDFTIPGKIDRVSINDYEDLLAEVKQ
Ga0247667_10978221	3300024290	Soil	HIKGEITRAGVPENWKDVMSLYAHIGARTIKMGTVAVIHSNEPIDFTIPGKIDRVSIDEYEDLLAEVKQ
Ga0207665_116908592	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AGAEATADGKTHIKGTITRAGVPDHWKDVVPLYAHMGDKTVKMGTIGVTHASEPIDFIIPGKIDRVSINDYEDLLAEVKQ
Ga0209863_101999832	3300026281	Prmafrost Soil	TPDGKTHVKATVQRTGVPDNWKDSVAIYAHVGDKTTRIGTLAVTHASEPIDAVLPGKIDRVTINDHEDLLAEVKQ
Ga0257158_11057641	3300026515	Soil	RSGVPDTWKDAVPLYAHTGERTVRLGILGVTHSSEPIDVTLPGKIDRLSINDYEDMLAEVKQ
Ga0209378_12740132	3300026528	Soil	GKTHVKGELTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKVDRVSINDYEDLLADVKQ
Ga0209807_10370911	3300026530	Soil	NQYVYGTGIPQYSFHASVEATPDGKTHVKGELTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTRSSEPVDITLAGKVDRVSINDYEDLLADVKQ
Ga0209648_1000090421	3300026551	Grasslands Soil	PDGKTHIKGQLTRSGVPETWKDAIPVYAHMGDKTIRLGTLAATHASEPLDVTLPGKIDRVTINDYEDLLADVKQ
Ga0209648_102291172	3300026551	Grasslands Soil	PDGKTHIKGQLTRSGVPETWKDAIPVYAHMGDKTIRLGTLAAAHASEPLDVTLPGKIDRVTVNDYEDLLADVKQ
Ga0209625_10920622	3300027635	Forest Soil	ADGKTHVKGEITRAGVTDGWKDVIPLYAHSGDKTLRLGTLAIMHATEPFDFTLPLKVDRLSINDHEDLLADVKQ
Ga0209009_10281361	3300027667	Forest Soil	MGEPQYTFHSTIDLTPDGKTHVKAELTRTGVPDSWKDVVSMYAHTGDKTVHLGYISATHPTEQLDFALAGKIDRITINDYEDLLAEVKQ
Ga0209447_102180542	3300027701	Bog Forest Soil	PTPDGKTHIKAELTRTGVPDSWKDVVPIYGHMGDRTIRLGAIAATHSSEPLDVTIPAKIDRLTINDYEDLLAEVKQ
Ga0209248_101061092	3300027729	Bog Forest Soil	EATPDGKTKVKGEFSRSGVPENWKDNVPIYAHIGEKTIRLGSVGVMHSTAPFEAILPGKIDRISINDYEDLLADVKQ
Ga0209248_102552142	3300027729	Bog Forest Soil	IKGEITRTGVPDSWKDAVPLYAHIGEKTVKMGLISVSHANEPFDFTIPGKIDRVSINDFEDLLADVKQ
Ga0209139_103351311	3300027795	Bog Forest Soil	KTHIKGEFTRAGVPDNWKDAVPLYAHIGDRTVKMGLISVSHANESFDFALPGKIDRVSINDYEDLLAEVKQ
Ga0209811_100275433	3300027821	Surface Soil	YGAGEPRYTFHVTTEATADGKTHFKGAITRAGVPDNWKDVVPLYAHMRDKTVKMGTIGVTHASEPFDFTIPGKIDRVSINDYEDLLAEVRQ
Ga0209773_100578091	3300027829	Bog Forest Soil	TADGKTHIKGQITRAGVPDNWKDAVPLYAHMGDKTVKMGLISVTHPNEPFDFAIPGKIDRISINDYEDLLADVKQ
Ga0209274_101452111	3300027853	Soil	FNQYVYGTGEAQYTFRSRTEATADGKTHIKGEITRAGVSDTWKDAVPLYAHIGDKTVKMGLISVTRANEPFDFLIPGKIDRVSINDFEDLLAEVKQ
Ga0209283_106158221	3300027875	Vadose Zone Soil	LEPTADGKTHVQGQITRSGVPDAWKDVVALYAHIGEKTVRLGTLGVTHPNEPIDITFGGKFDRLTINDNEDLLADVKQ
Ga0209283_108735851	3300027875	Vadose Zone Soil	ITHTGVPDSWKDVIPLYAHLGDKTLRLGTLAITHATEPFEFVVPLKVDRLSINDHEDLLADVKQ
Ga0209169_106990092	3300027879	Soil	EATADGKTHIKGEIDRTGVPATWKDAIPLYAHIGDKAFKMGMLSATHPNEPFDFTVPGKIDRVTINDYEDSLAEVKQ
Ga0209488_107064832	3300027903	Vadose Zone Soil	KTHIKGELTRTGVPDNWKDAIPLYAHMGDKTLRLGTLAVTHATEPIDVTLPVKIDRLSINDHEDLLADVKQ
Ga0209415_100038441	3300027905	Peatlands Soil	FHATTEATADGKTHIKGEIDRAGVADTWKDAVPLYAHIGDKTLKMGLIGVTKANEPFDFTIPGKIDRVSINDYEDLLADVKQ
Ga0209168_100508693	3300027986	Surface Soil	TADGKTHIKGEITRAGVPDNWKDAVPLYAHIGDKTVKMGLISITRANEPFDFAIQGKIDRVSINDFEDLLAEVKQ
Ga0247685_10451142	3300028065	Soil	GEPQYTFHVTMEATADGKTHFKGAITRAGVQDNWKDVVPLYAHMGDKTVKMGTIGVTHASEPFDFTIPGKIDRVSINDYEDLLAEVKQ
Ga0247684_10439472	3300028138	Soil	FFNQYVYGTGEPQYTFHVTAEAVPDGKTHIKGEITRAGVPENWKDVMSLYAHIGARTIKMGTVAVIHSNEPIDFTIPGKIDRVSIDEYEDLLAEVKQ
Ga0265338_105699221	3300028800	Rhizosphere	YVYGTGIPQYNFHATTQATPDGKTHITGQLVRSGVPEGWKDVVPIYAHVGDKVIRIGSLAAQLSTEPLDAVVPAKIDRVTINEHEDLLADVHQ
Ga0222749_107428111	3300029636	Soil	AQYTFSSRTEATADGKTHIKGEITRTGVSDTWKDAVPLYAHIGDRTVKMGLLSVTHPNQPFDFLIPGKIDRVSINDYEDLLAEVKQ
Ga0265320_104834051	3300031240	Rhizosphere	YVYGMGEAQYTFHATTEATADGKTHIKGAIDRAGVPDTWKDDVPLYAHIGDKTVKMGLIGVTKANEPFDFTIPGKIDRVSINDYEDLLADVKQ
Ga0307476_107226191	3300031715	Hardwood Forest Soil	DGKTHIKGEIDRAGVPETWKDAISLYAHIGDKTIKMGLIGVIKANQPFDFTVAGKIDRVTINDFEDLLADVKQ
Ga0307474_104577241	3300031718	Hardwood Forest Soil	TADGKTHVKGEITRAGVSDGWKDVIPLYAHSGDKTLRLGTLAITHATEPFDFTLPLKVDRLSINDHEDLLADVKQ
Ga0307469_104893081	3300031720	Hardwood Forest Soil	SVEATPDGKTHVKGELTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKIDRVSINDYEDLLADVKQ
Ga0307477_106081911	3300031753	Hardwood Forest Soil	RVSLEPTADGNTHVKGEITRAGVTDGWKDVIPLYAHSGDKTLRLGTLSIMHATEPFDFTLPLKVDRLSINDHEDLLADVKQ
Ga0307471_1002163403	3300032180	Hardwood Forest Soil	PDGKTHVRGELTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKIDRVSINDYEDLLADVKQ
Ga0307471_1041359902	3300032180	Hardwood Forest Soil	TITRAGVPDHWKDVVPLYAHMGDKTVKMGTIGVTHASEPIDFLIPGKIDRVSINDYEDLLAEVKQ
Ga0307472_1002518023	3300032205	Hardwood Forest Soil	IPQYSFHASVEATPDGKTHVKGQLTRSGVPDTWKDAVPLYAHMGDKTVRLGTLGVTHSSEPVDITLAGKIDRVSINDYEDLLADVKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103594

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences