Metagenome / Metatranscriptome Family F103570

Basic Information
Family ID	F103570
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	49 residues
Representative Sequence	VQDLGEHIVVVVHERTPSLADAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Number of Associated Samples	92
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.00 %
% of genes near scaffold ends (potentially truncated)	95.05 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Most Common Taxonomy
Group	Bacteria (69.307 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.733 % of family members)
Environment Ontology (ENVO)	Unclassified (24.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.495 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 5.06% Coil/Unstructured: 94.94%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02577	BFN_dom	51.49
PF01817	CM_2	37.62
PF00571	CBS	6.93
PF13614	AAA_31	0.99
PF02195	ParBc	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	51.49
COG1605	Chorismate mutase	Amino acid transport and metabolism [E]	37.62

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.31 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.31 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.31 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.60 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.60 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.69 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.69 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	5.94 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.98 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.69 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	5.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.98 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.69 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	5.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.98 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.69 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	5.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.98 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725003\|GPWSG_F5G3JLY01A7AS6	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	504	Open in IMG/M
3300000886\|AL3A1W_1037098	Not Available	635	Open in IMG/M
3300000891\|JGI10214J12806_10096949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300004081\|Ga0063454_101804146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300004114\|Ga0062593_100874050	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300004114\|Ga0062593_101105350	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300004479\|Ga0062595_100495819	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300004479\|Ga0062595_100911964	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300004480\|Ga0062592_102000500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300005177\|Ga0066690_10576483	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005178\|Ga0066688_10163471	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300005186\|Ga0066676_11033321	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005187\|Ga0066675_10873231	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005546\|Ga0070696_100427029	Not Available	1042	Open in IMG/M
3300005547\|Ga0070693_101604031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300005554\|Ga0066661_10929150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300005559\|Ga0066700_10524080	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005560\|Ga0066670_10356011	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005566\|Ga0066693_10224022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300005614\|Ga0068856_100946808	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005937\|Ga0081455_10473958	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300006038\|Ga0075365_11279004	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006178\|Ga0075367_10182407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1309	Open in IMG/M
3300006755\|Ga0079222_12112743	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006914\|Ga0075436_100816288	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300007788\|Ga0099795_10246175	Not Available	769	Open in IMG/M
3300009012\|Ga0066710_101754886	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300009098\|Ga0105245_10337199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1490	Open in IMG/M
3300009137\|Ga0066709_101496781	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300009137\|Ga0066709_103077059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300009176\|Ga0105242_13187469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300009177\|Ga0105248_11627174	Not Available	732	Open in IMG/M
3300009840\|Ga0126313_10566052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300010045\|Ga0126311_10726390	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300010147\|Ga0126319_1568915	Not Available	671	Open in IMG/M
3300010337\|Ga0134062_10476742	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300010337\|Ga0134062_10594048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300010366\|Ga0126379_13520105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300010371\|Ga0134125_12883713	Not Available	522	Open in IMG/M
3300011270\|Ga0137391_10087258	Not Available	2696	Open in IMG/M
3300012008\|Ga0120174_1144792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300012202\|Ga0137363_10712104	Not Available	850	Open in IMG/M
3300012207\|Ga0137381_10100258	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300012208\|Ga0137376_11128507	Not Available	670	Open in IMG/M
3300012208\|Ga0137376_11681763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	526	Open in IMG/M
3300012212\|Ga0150985_109021555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300012354\|Ga0137366_10435861	Not Available	951	Open in IMG/M
3300012356\|Ga0137371_11285223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300012469\|Ga0150984_107706023	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300012469\|Ga0150984_111351484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1568	Open in IMG/M
3300012469\|Ga0150984_112798260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300012930\|Ga0137407_10141126	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300012941\|Ga0162652_100098862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	521	Open in IMG/M
3300012977\|Ga0134087_10404235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300012985\|Ga0164308_10745924	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300012989\|Ga0164305_11431314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300013102\|Ga0157371_10482624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300013296\|Ga0157374_11327107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300015077\|Ga0173483_10775773	Not Available	550	Open in IMG/M
3300017659\|Ga0134083_10274558	Not Available	710	Open in IMG/M
3300018066\|Ga0184617_1256347	Not Available	525	Open in IMG/M
3300018433\|Ga0066667_10215007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1426	Open in IMG/M
3300018433\|Ga0066667_11027643	Not Available	711	Open in IMG/M
3300018482\|Ga0066669_12006721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	542	Open in IMG/M
3300019255\|Ga0184643_1155292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300019269\|Ga0184644_1597388	Not Available	666	Open in IMG/M
3300019885\|Ga0193747_1012535	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300019887\|Ga0193729_1258019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	546	Open in IMG/M
3300020006\|Ga0193735_1167529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300020018\|Ga0193721_1078788	Not Available	855	Open in IMG/M
3300021078\|Ga0210381_10346853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300021080\|Ga0210382_10031344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1999	Open in IMG/M
3300021344\|Ga0193719_10312426	Not Available	658	Open in IMG/M
3300021418\|Ga0193695_1128414	Not Available	525	Open in IMG/M
3300025906\|Ga0207699_10017745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3755	Open in IMG/M
3300026295\|Ga0209234_1062616	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300026310\|Ga0209239_1252737	Not Available	608	Open in IMG/M
3300026527\|Ga0209059_1124875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300027821\|Ga0209811_10393982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300027846\|Ga0209180_10181196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300027907\|Ga0207428_10074380	All Organisms → cellular organisms → Bacteria	2664	Open in IMG/M
3300028711\|Ga0307293_10000617	All Organisms → cellular organisms → Bacteria	8817	Open in IMG/M
3300028716\|Ga0307311_10123108	Not Available	736	Open in IMG/M
3300028721\|Ga0307315_10146093	Not Available	716	Open in IMG/M
3300028768\|Ga0307280_10188478	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300028768\|Ga0307280_10258871	Not Available	627	Open in IMG/M
3300028778\|Ga0307288_10098987	Not Available	1060	Open in IMG/M
3300028796\|Ga0307287_10078661	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300028803\|Ga0307281_10042038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1411	Open in IMG/M
3300028878\|Ga0307278_10236112	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300028881\|Ga0307277_10109004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1179	Open in IMG/M
3300030830\|Ga0308205_1027506	Not Available	683	Open in IMG/M
3300030987\|Ga0308155_1029079	Not Available	546	Open in IMG/M
3300031114\|Ga0308187_10349241	Not Available	570	Open in IMG/M
3300031123\|Ga0308195_1051068	Not Available	599	Open in IMG/M
3300031125\|Ga0308182_1027845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	509	Open in IMG/M
3300031200\|Ga0307496_10090698	Not Available	582	Open in IMG/M
3300031421\|Ga0308194_10197106	Not Available	649	Open in IMG/M
3300031740\|Ga0307468_102209018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300034681\|Ga0370546_046144	Not Available	662	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.15%
Host-Associated	Host-Associated	14.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.21%
Plants	Host-Associated → Plants	14.85%
Aquatic	Environmental → Aquatic	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.90%
Freshwater	Environmental → Aquatic → Freshwater	4.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.97%
Roots	Host-Associated → Plants → Roots	1.98%
Sediment	Environmental → Aquatic → Sediment	0.99%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.93%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.96%
Loam	Environmental → Terrestrial → Soil → Loam	3.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.98%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.95%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.97%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.98%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWSG_01759740	2067725003	Soil	VGVQDRGDHIVVVVHERTPSLADSAQPRVTYPFVLISLPRSKEPVKLKWPGRP
AL3A1W_10370981	3300000886	Permafrost	VVVVHEQTPTLGDPVQPRVTYPFVLIALPRSGEPVKLKWPGRP*
JGI10214J12806_100969492	3300000891	Soil	VLVVVHERTPTLGEPVRARVTYPFRLILLPKLDKPVKLKWPGRP*
Ga0063454_1018041461	3300004081	Soil	VSVEKKGGHVEVIVREQTPALGDPVRARVTYPYRLLALDSDEPVHLKWLGRP*
Ga0062593_1008740503	3300004114	Soil	DHVVVVVRERTPSLGDPVQARVTYPFRLITLPRSDEPVKLKWLGRP*
Ga0062593_1011053501	3300004114	Soil	KIVSVRDESDRVLVTVHEDTPSLGEPVRARVTYPFRLIVLPRLDKPVKLKWPGRP*
Ga0062595_1004958193	3300004479	Soil	GGHVQVVVRERTPSLGDAVRPRVTYPFRLLFLPSHDPVHLKWLGRP*
Ga0062595_1009119641	3300004479	Soil	VSVYEHGDHVQVVVRERTPTLGDPVSAGVTYPFRLLALPSHKPVHLKWLGRP*
Ga0062592_1020005001	3300004480	Soil	ARVRDEGDRVLVVVHERTPTLGEPVRARVTYPFRLILLPKLDKPVKLKWPGRP*
Ga0066690_105764833	3300005177	Soil	VVVRERTPSLGDRVQARVTYPFRLIALRRSNKPVKLRWLGRP*
Ga0066688_101634713	3300005178	Soil	VVVVVRETTPSLGEPVEARVTYPFRLIALPRNEKPVRLKWLGRP*
Ga0066676_110333213	3300005186	Soil	VHERTPSLGDPAGARVTYPYRLITLPRSTKPVKLKWPGRP*
Ga0066675_108732311	3300005187	Soil	VQDEGSRVVVVVHEETPSLGDPVEARVTYPYRLIALPRSDEPVKLKWPGRP*
Ga0070696_1004270294	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VHERTPSLADSVQPRVTYPFVLISLPRSNEPVKLKWPGRP*
Ga0070693_1016040312	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VSVYEHGDHVQVVVRERTPTLGDPVRARVTYPFRLLALPSHKPVHLKWLGRP*
Ga0066661_109291502	3300005554	Soil	DTGSQILVWVHERTPALGDPIQARITYPYRLITLPRSDKPVKLKWPGRP*
Ga0066700_105240803	3300005559	Soil	PSLGQPVTAKVTYPFRLITVPRSDKHLRLKWLGRP*
Ga0066670_103560113	3300005560	Soil	HGGHVQVVVRERTPSLGDAVRPRVTYPFRLLFLPSHDPVHLKWLGRP*
Ga0066693_102240223	3300005566	Soil	VRVYEHGDHVQVVVREQTPTLGDRVRARVTYPFRLLVLSSHKPVHLKWLGRP*
Ga0068856_1009468083	3300005614	Corn Rhizosphere	LRVVRVYEHGDHVQVVVRERTPSLGDPVRARVTYPFRLLALPTHKPVHLKWLGRP*
Ga0081455_104739583	3300005937	Tabebuia Heterophylla Rhizosphere	PSLGERVTAKVTYPFRLLSVPRSGKPLRLKWIGRP*
Ga0075365_112790041	3300006038	Populus Endosphere	VVVRERTPSLGDPVQARVTYPFRLITLPRSDEPVKLKWLGRP*
Ga0075367_101824074	3300006178	Populus Endosphere	SLRVVRVYEHGDHVQVVVRERTPELGDRVHPRVTYPFRLLALPSHEPVHLKWLGRP*
Ga0079222_121127433	3300006755	Agricultural Soil	YEHGDHVQVVLRERTPSLGDPVRARVTYPFRLLALPTHKPVHLKWLGRP*
Ga0075436_1008162883	3300006914	Populus Rhizosphere	GDHIQVVVRERAPSLGDSVHPRLTYPFRLLSLPSHKPVHLKWLGRP*
Ga0099795_102461752	3300007788	Vadose Zone Soil	RGQDLGDRIVVVVHERTPSLGDAVQARVTYPFRLIALPRSSKPVTLKWPGRP*
Ga0066710_1017548863	3300009012	Grasslands Soil	LEILHVEDTGPDIVVRVHERTPSLGDPVQVRVTYPYRLITLPRSDKPVKLKWPGRP
Ga0099827_105210373	3300009090	Vadose Zone Soil	LRVVDQRGRLVVTVRERTPRLGDPTRAEVTYPYRLITVPAGDKPVFLDWQGRP*
Ga0105245_103371991	3300009098	Miscanthus Rhizosphere	KGDQIVVVVHERTPTLGDPVQARVTYPFRLITLPRSTKPVKLKWPGRP*
Ga0066709_1014967813	3300009137	Grasslands Soil	YALKIVRVQEKGGHINVVVRERTPSLGEPVQAHVTYPFRLLALDSDKPVHLKWLGRP*
Ga0066709_1030770592	3300009137	Grasslands Soil	VQVYEHGDHVQVVVRERTPELGDRVHVRVTYPFRLLALPSHEPVHLKWLGRP*
Ga0105242_131874693	3300009176	Miscanthus Rhizosphere	GDRIVVTVHERTPTLGDPVRARVTYPFRLIAFPRSDKPVKLKWPGRP*
Ga0105248_116271742	3300009177	Switchgrass Rhizosphere	DRIVVVVHERTPSLADSVQPRVTYPFVLISLPRSDEPVKLKWPGRP*
Ga0126313_105660521	3300009840	Serpentine Soil	RIVVTVRERTPSLGDPVRARVTYPYRLLALPRSDKSVKLKWLGRP*
Ga0126311_107263903	3300010045	Serpentine Soil	YALHIVRVEEQNGHIDVAVREETPSLGDPVRARVTYPYRLLVLDGHKPVHLKWLGRP*
Ga0126319_15689152	3300010147	Soil	VRVQDEGDHIDIVVHERTPSLADRVQARVTYPFVLISLPRSEEPVKLKWPGRP*
Ga0134062_104767423	3300010337	Grasslands Soil	VVVHEETPSLGDPVEARVTYPHRLIALPRSDEPVKLKWPGRP*
Ga0134062_105940483	3300010337	Grasslands Soil	VRVEDKGEHIVVVVHEHTPSLGEPVEARVTYPFRLIALPRSDEPVKLKWPGRP*
Ga0126379_135201053	3300010366	Tropical Forest Soil	VVRERTPSLGDPVNARVTYPFRLISLPSHKPVHLKWLGRP*
Ga0134125_128837132	3300010371	Terrestrial Soil	TGYELQVVRVQDVGDHINVVVHERTPTLGDPVQARVTYPFRLIALPRSDKPVKLKWPGRP
Ga0137391_100872587	3300011270	Vadose Zone Soil	TGYVLEVIRVQDVGDHIVVVVHERTPSLGDAVQARVTYPFRLIALPRSDKPVKLKWPGRP
Ga0120174_11447922	3300012008	Permafrost	VRVRDLGDHIVVVVHEQTPTLGDPVQPRVTYPFVLIALPRSGEPVKLKWPGRP*
Ga0137363_107121043	3300012202	Vadose Zone Soil	ERTPSLGDAVQARVTYPFRLIALPRSDKPVRLKWPGRP*
Ga0137381_101002588	3300012207	Vadose Zone Soil	EVLRVQDVGDHIVVVVHERTPSLGDAVRARVTYPFRLIALPRSDKPVKLKWPGRP*
Ga0137376_111285072	3300012208	Vadose Zone Soil	VHERTPSLGNPVQARVTYPFVLISLPRSKEPVKLKWPGRP*
Ga0137376_116817632	3300012208	Vadose Zone Soil	GVQDVGSHILVVVHERTPSLDDTVQAGVTYPFRIIALARSDKPVKLKWPGRP*
Ga0150985_1090215553	3300012212	Avena Fatua Rhizosphere	FVVVHEQTPTLEDPVEARVTYPFRLIALPRSDKPVKLKWPGRP*
Ga0137366_104358611	3300012354	Vadose Zone Soil	VVHERTPTLGDPVRARVTYPFVLIALPRSDEPVKLKWPGRP*
Ga0137371_112852231	3300012356	Vadose Zone Soil	IDVVVHEQTPSLGDPVRARVTYPFRLLALDSHKPVHLRWPGRP*
Ga0150984_1077060231	3300012469	Avena Fatua Rhizosphere	VYEHGDHVQVVVRERTPELGDRVHARVTYPFRLLALPSHEPVHLKWLGRP*
Ga0150984_1113514844	3300012469	Avena Fatua Rhizosphere	VYEHGGHVQVVVRERTPSLGDPVRPRVTYPFRLLALQSHEPVHLKWLGRP*
Ga0150984_1127982603	3300012469	Avena Fatua Rhizosphere	VYEHGGHVQVVVRERTPSLGDAVRPRVTYPFRLLFLPNHDPVHLKWLGRP*
Ga0137407_101411267	3300012930	Vadose Zone Soil	VIHERTPSLAGAVQARVTYPFRLIALPRSSKPVKLKWPGRP*
Ga0162652_1000988622	3300012941	Soil	VRDDGDHIVVVVHERTPSLADRVQPRVTYPFALISLPRSKEPVKLKWPGRP*
Ga0134087_104042353	3300012977	Grasslands Soil	VEDTGPNIVVRVHERTPSLGDPVRVRVTYPYRLITLPRSDKPVKLKWPGRP*
Ga0164308_107459243	3300012985	Soil	YSLRVVRVYEHGDHVQVVVREHTPSLGNSVHARVTYPFRLLALPSHKPVHLKWLGRP*
Ga0164305_114313141	3300012989	Soil	SLRVVRVYEHGGHVQVVVRERTPSLGDPVRARVTYPFRLLALPSHEPVHLKWLGRP*
Ga0157371_104826241	3300013102	Corn Rhizosphere	LRIVSLRDEGDRIVVTVHERTPSLGDPVRARVTYPFRLIAFPRSDKPVKLKWPGRP*
Ga0157374_113271073	3300013296	Miscanthus Rhizosphere	VQVVVRERTPTLGDPVSARVTYPFRLLALPSHKPVHLKWLGRP*
Ga0173483_107757732	3300015077	Soil	EGDHIVVVVHERTPSLADSVQPRVTYPFVLISLPRSSEPVKLKWPGRP*
Ga0134083_102745581	3300017659	Grasslands Soil	VRVRDLGDHFVVVVHERTPTLGDPVRARVTYPFILIALPRSDEPVKLKWPGRP
Ga0184617_12563472	3300018066	Groundwater Sediment	VVVVHERTPTLGDPVQDRVTYPFRLITLPRSNEPVKLKWPGRP
Ga0066667_102150071	3300018433	Grasslands Soil	SGYELQVLRVQDLGDRIVVVVHERTPSLGGAVQARVTYPFLLIALPRSSKPVTLKWPGRP
Ga0066667_110276431	3300018433	Grasslands Soil	YALQVLRVQDVGSHIDVVIHERTPSLGDAVEVHVTYPFRLIALPRSSEPVKLKWPGRP
Ga0066669_120067212	3300018482	Grasslands Soil	RVQDLGDRIVVVVHERTPSLGDAVQARVTYPFRLIALPRSSKPVTLKWPGRP
Ga0184643_11552921	3300019255	Groundwater Sediment	TGYALRIVRVEEQGGHIQVVVREQAPSLGDRVRARVTYPFRLLALDSHKPVRLKWPGRP
Ga0184644_15973882	3300019269	Groundwater Sediment	VRVEDLGEHIVVVVHERTPSLADAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Ga0193747_10125351	3300019885	Soil	LRDVGDRIVVTVHERTPSLGDPVRARVTYPFRLIAFPRSDKPVKLKWPGRP
Ga0193729_12580191	3300019887	Soil	GPRSSTGYELRILRVQDVGSHIDVVIHERTPSLDDAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Ga0193735_11675291	3300020006	Soil	VRERTPSLGDPVAAHVTYPYRLITLPRRNKPVELIWEGRP
Ga0193721_10787881	3300020018	Soil	TPSLADAVQPRVTYPFRLIALPRSSKPVKLKWPGRP
Ga0210381_103468532	3300021078	Groundwater Sediment	RVEEQGGHIQVVVREQAPSLGDRVRARVTYPFRLLALDSHKPVQLKWPGRP
Ga0210382_100313447	3300021080	Groundwater Sediment	VRVQDLGEHIVVVVHERTPSLADAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Ga0193719_103124262	3300021344	Soil	EIVGVRDEGDHIVVVVHERTPSLTDRVQPRVTYPFVLISLPRSREPVKLKWPGRP
Ga0193695_11284142	3300021418	Soil	VVIHERTPSLADAVQPRVTYPFRLIALPRSSKPVKLKWPGRP
Ga0207699_100177451	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RSSTGFDLRIVSLRDEGDRIVVTVHERTPSLGDPVRARVTYPFRLIAFPRSDKPVKLKWPGRP
Ga0209234_10626165	3300026295	Grasslands Soil	EETPSLGDPVEARVTYPYRLIALPRSDEPVKLKWPGRP
Ga0209239_12527371	3300026310	Grasslands Soil	SSGYELQVLRVQDLGDRIVVVVHERTPSLGDAVQARVTYPFRLIALPRSSKPVTLKSPGR
Ga0209059_11248754	3300026527	Soil	RDTGSRIVVTVHERTPSLGDPVRARVTYPYRLITLPQSDLPVKLKWPGRP
Ga0209811_103939821	3300027821	Surface Soil	VRERTPSLGDSVHARVTYPFQLLALPSHKPVHLKWLGRP
Ga0209180_101811961	3300027846	Vadose Zone Soil	SSTGYVLEVIRVQDVGDHIVVVVHERTPSLGDAVQARVTYPFRLIALPRSSKPVTLKWPGRP
Ga0207428_100743807	3300027907	Populus Rhizosphere	LRVVRVYEHGDHVQVVVRERTPELGDRVHPRVTYPFRLLALPSHEPVHLKWLGRP
Ga0307293_1000061715	3300028711	Soil	RTPSLGDAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Ga0307311_101231082	3300028716	Soil	AGPRSSTGYALQILRVQDVGGHIDVVIHERTPSLADAVQPRVTYPFRLIELPRNSKPVKLKWPGRP
Ga0307315_101460931	3300028721	Soil	VHERTPSLADRVQPRVTYPFVLISLPRSKEPVKLKWPGRP
Ga0307280_101884781	3300028768	Soil	QAPSLGDRVRARVTYPFRLLALDSHKPVRLKWPGRP
Ga0307280_102588711	3300028768	Soil	RVQDLGEHIVVVVHERTPSLADAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Ga0307288_100989871	3300028778	Soil	VRDEGDHIVVVVHERTPSLADPVQPRVTYPFVLISLPRSKEPVKLKWPGRP
Ga0307287_100786613	3300028796	Soil	RVQEKGDHIQVVVHEQTPSLGDRVRARVTYPFRLLALDSHKPVRLKWPGRP
Ga0307281_100420381	3300028803	Soil	ERAPALGNPVQARVTYPFRLIALPRSTEPVKLKWPGRP
Ga0307278_102361123	3300028878	Soil	QTPSLGDRVRARVTYPFRLLAVDSHKPVQLKWPGRP
Ga0307277_101090044	3300028881	Soil	RTPSLADAVQARVTYPFRLIALPRNSKPVKLKWPGRP
Ga0308205_10275061	3300030830	Soil	GYALEIVGVRDEGGHIVVVVHERTPSLADSVQPRVTYPFLLISLPRSKEPVKLKWPGRP
Ga0308155_10290791	3300030987	Soil	PSLADAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Ga0308187_103492412	3300031114	Soil	HIVVVVHERTPSLTDRVQPRVTYPFVLISLPRSKEPVKLKWPGRP
Ga0308195_10510681	3300031123	Soil	PSLADPVQPRVTYPFVLISLPRSKEPVKLKWPGRP
Ga0308182_10278452	3300031125	Soil	VQDLGEHIVVVVHERTPSLADAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Ga0307496_100906981	3300031200	Soil	GDHIVVVVHERTPSLADSVQPRVTYPFVLISLPRSNEPVKLKWPGRP
Ga0308194_101971062	3300031421	Soil	NHIDVVIHERTPSLGDAVQARVTYPFRLIALPRSSKPVKLKWPGRP
Ga0307468_1022090183	3300031740	Hardwood Forest Soil	EGDRLVVTVHERTPSLGDPVRARVTYPFRLIAFPRSDKPVKLKWPGRP
Ga0370546_046144_2_136	3300034681	Soil	IDVVIHERTPSLADTVQARVTYPFRLIALPRSSKPVKLKWPGRP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103570

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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