Metagenome Family F103553

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Overview

Basic Information
Family ID	F103553
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	55 residues
Representative Sequence	MASNIKYPESTARWFIEGDKLCLITKVDSSGNTRTSARKQWKAISEAVTDGI
Number of Associated Samples	77
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.00 %
% of genes near scaffold ends (potentially truncated)	97.03 %
% of genes from short scaffolds (< 2000 bps)	90.10 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (86.139 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (54.455 % of family members)
Environment Ontology (ENVO)	Unclassified (97.030 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.040 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.75% β-sheet: 12.50% Coil/Unstructured: 68.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.14 %
All Organisms	root	All Organisms	13.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.14 %
Viruses	superkingdom	All Organisms → Viruses	12.87 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876007\|none_p0396775	Not Available	526	Open in IMG/M
3300000947\|BBAY92_10062456	Not Available	1007	Open in IMG/M
3300002484\|JGI25129J35166_1027717	Not Available	1227	Open in IMG/M
3300002511\|JGI25131J35506_1066802	Not Available	502	Open in IMG/M
3300002514\|JGI25133J35611_10007578	All Organisms → Viruses → Predicted Viral	4980	Open in IMG/M
3300002518\|JGI25134J35505_10004317	All Organisms → cellular organisms → Bacteria	5292	Open in IMG/M
3300002518\|JGI25134J35505_10138112	Not Available	504	Open in IMG/M
3300002760\|JGI25136J39404_1111617	Not Available	517	Open in IMG/M
3300003542\|FS900DNA_10840198	Not Available	544	Open in IMG/M
3300006191\|Ga0075447_10236505	Not Available	594	Open in IMG/M
3300006736\|Ga0098033_1112899	Not Available	770	Open in IMG/M
3300006736\|Ga0098033_1166559	Not Available	615	Open in IMG/M
3300006736\|Ga0098033_1174193	Not Available	599	Open in IMG/M
3300006738\|Ga0098035_1139330	Not Available	829	Open in IMG/M
3300006750\|Ga0098058_1158966	Not Available	595	Open in IMG/M
3300006751\|Ga0098040_1063802	All Organisms → Viruses → Predicted Viral	1132	Open in IMG/M
3300006752\|Ga0098048_1085784	Not Available	960	Open in IMG/M
3300006753\|Ga0098039_1059119	Not Available	1335	Open in IMG/M
3300006753\|Ga0098039_1086805	All Organisms → Viruses → Predicted Viral	1080	Open in IMG/M
3300006753\|Ga0098039_1159808	Not Available	769	Open in IMG/M
3300006753\|Ga0098039_1185017	Not Available	708	Open in IMG/M
3300006754\|Ga0098044_1230579	Not Available	721	Open in IMG/M
3300006789\|Ga0098054_1020931	All Organisms → Viruses → Predicted Viral	2605	Open in IMG/M
3300006922\|Ga0098045_1161375	Not Available	512	Open in IMG/M
3300006927\|Ga0098034_1042020	Not Available	1361	Open in IMG/M
3300006928\|Ga0098041_1062635	Not Available	1201	Open in IMG/M
3300006928\|Ga0098041_1280664	Not Available	530	Open in IMG/M
3300006929\|Ga0098036_1277470	Not Available	505	Open in IMG/M
3300007963\|Ga0110931_1042437	Not Available	1374	Open in IMG/M
3300008050\|Ga0098052_1064670	Not Available	1543	Open in IMG/M
3300008216\|Ga0114898_1095187	Not Available	895	Open in IMG/M
3300008217\|Ga0114899_1029341	All Organisms → Viruses → Predicted Viral	2064	Open in IMG/M
3300008219\|Ga0114905_1026554	Not Available	2242	Open in IMG/M
3300008220\|Ga0114910_1072309	All Organisms → Viruses → Predicted Viral	1065	Open in IMG/M
3300009413\|Ga0114902_1102385	Not Available	762	Open in IMG/M
3300009413\|Ga0114902_1158474	Not Available	569	Open in IMG/M
3300009414\|Ga0114909_1053884	Not Available	1182	Open in IMG/M
3300009418\|Ga0114908_1061924	Not Available	1315	Open in IMG/M
3300009418\|Ga0114908_1154723	Not Available	734	Open in IMG/M
3300009449\|Ga0115558_1176499	Not Available	891	Open in IMG/M
3300009602\|Ga0114900_1169948	Not Available	551	Open in IMG/M
3300009604\|Ga0114901_1144609	Not Available	717	Open in IMG/M
3300009605\|Ga0114906_1150790	Not Available	802	Open in IMG/M
3300009620\|Ga0114912_1041802	Not Available	1195	Open in IMG/M
3300009620\|Ga0114912_1089025	Not Available	748	Open in IMG/M
3300009620\|Ga0114912_1095516	Not Available	717	Open in IMG/M
3300009622\|Ga0105173_1081572	Not Available	578	Open in IMG/M
3300010150\|Ga0098056_1020088	All Organisms → Viruses → Predicted Viral	2383	Open in IMG/M
3300010150\|Ga0098056_1163236	Not Available	750	Open in IMG/M
3300010150\|Ga0098056_1241638	Not Available	599	Open in IMG/M
3300010151\|Ga0098061_1295689	Not Available	557	Open in IMG/M
3300010151\|Ga0098061_1320165	Not Available	531	Open in IMG/M
3300010153\|Ga0098059_1242273	Not Available	696	Open in IMG/M
3300010153\|Ga0098059_1259978	Not Available	668	Open in IMG/M
3300010153\|Ga0098059_1264444	Not Available	661	Open in IMG/M
3300010155\|Ga0098047_10030585	All Organisms → Viruses → Predicted Viral	2147	Open in IMG/M
3300010155\|Ga0098047_10313750	Not Available	591	Open in IMG/M
3300017702\|Ga0181374_1054040	Not Available	682	Open in IMG/M
3300017702\|Ga0181374_1068564	Not Available	596	Open in IMG/M
3300017704\|Ga0181371_1012228	Not Available	1454	Open in IMG/M
3300017705\|Ga0181372_1037369	Not Available	820	Open in IMG/M
3300017715\|Ga0181370_1038882	Not Available	614	Open in IMG/M
3300017720\|Ga0181383_1150994	Not Available	624	Open in IMG/M
3300017743\|Ga0181402_1025828	Not Available	1654	Open in IMG/M
3300017775\|Ga0181432_1208515	Not Available	613	Open in IMG/M
3300017775\|Ga0181432_1232889	Not Available	579	Open in IMG/M
3300020364\|Ga0211538_1042522	Not Available	1443	Open in IMG/M
3300020438\|Ga0211576_10410344	Not Available	692	Open in IMG/M
3300025042\|Ga0207889_1007456	Not Available	1050	Open in IMG/M
3300025052\|Ga0207906_1034292	Not Available	695	Open in IMG/M
3300025078\|Ga0208668_1062912	Not Available	673	Open in IMG/M
3300025082\|Ga0208156_1026470	Not Available	1270	Open in IMG/M
3300025099\|Ga0208669_1031904	All Organisms → Viruses → Predicted Viral	1280	Open in IMG/M
3300025103\|Ga0208013_1021383	All Organisms → Viruses → Predicted Viral	1919	Open in IMG/M
3300025103\|Ga0208013_1093941	Not Available	762	Open in IMG/M
3300025108\|Ga0208793_1081784	Not Available	930	Open in IMG/M
3300025109\|Ga0208553_1143442	Not Available	527	Open in IMG/M
3300025110\|Ga0208158_1035939	All Organisms → Viruses → Predicted Viral	1253	Open in IMG/M
3300025125\|Ga0209644_1053761	Not Available	923	Open in IMG/M
3300025168\|Ga0209337_1266095	Not Available	645	Open in IMG/M
3300025247\|Ga0207880_1066703	Not Available	510	Open in IMG/M
3300025248\|Ga0207904_1075133	Not Available	548	Open in IMG/M
3300025264\|Ga0208029_1079195	Not Available	626	Open in IMG/M
3300025268\|Ga0207894_1053195	Not Available	702	Open in IMG/M
3300025277\|Ga0208180_1086192	Not Available	723	Open in IMG/M
3300025280\|Ga0208449_1097938	Not Available	696	Open in IMG/M
3300025282\|Ga0208030_1067269	Not Available	969	Open in IMG/M
3300025282\|Ga0208030_1143660	Not Available	565	Open in IMG/M
3300025286\|Ga0208315_1008133	All Organisms → Viruses → Predicted Viral	3855	Open in IMG/M
3300025286\|Ga0208315_1017739	All Organisms → Viruses → Predicted Viral	2285	Open in IMG/M
3300025300\|Ga0208181_1043131	Not Available	961	Open in IMG/M
3300025301\|Ga0208450_1064380	Not Available	867	Open in IMG/M
3300025301\|Ga0208450_1071798	Not Available	802	Open in IMG/M
3300025305\|Ga0208684_1114379	Not Available	661	Open in IMG/M
3300026115\|Ga0208560_1025738	Not Available	564	Open in IMG/M
3300026115\|Ga0208560_1028276	Not Available	544	Open in IMG/M
3300026212\|Ga0208409_1070400	Not Available	835	Open in IMG/M
3300028022\|Ga0256382_1165443	Not Available	529	Open in IMG/M
3300032820\|Ga0310342_102697800	Not Available	594	Open in IMG/M
3300034654\|Ga0326741_061491	Not Available	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.01%
Algae	Host-Associated → Algae	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.01%
Green Algae	Host-Associated → Algae → Green Algae	0.99%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	87.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.96%
Strait	Environmental → Aquatic → Marine → Strait	3.96%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.99%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.99%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	87.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.99%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.99%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	54.46%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	28.71%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.96%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	2.97%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.97%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.99%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine	0.99%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	0.99%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.99%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.99%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.99%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876007	Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-0p1-Deep1200	Environmental	Open in IMG/M
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003542	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017715	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaG	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300025042	Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)	Environmental	Open in IMG/M
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025247	Marine viral communities from the Deep Pacific Ocean - MSP-91 (SPAdes)	Environmental	Open in IMG/M
3300025248	Marine viral communities from the Deep Pacific Ocean - MSP-118 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300026115	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)	Environmental	Open in IMG/M
3300026212	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
none_03967752	2236876007	Marine Estuarine	MASNITYPDSSALWFIEGDKLSLITNVDSSGSGRTTARKQWKAISEAVTDGLLLHFLW
BBAY92_100624563	3300000947	Macroalgal Surface	MASNIKYPENSCVWYIEGDNFVLLTNVDSSGNLNTTERKNWKAIQEAVTDGILIK
JGI25129J35166_10277173	3300002484	Marine	MASNIKYPEDQSLWFVEGDNLALITNVDSSGNANTTDRKNWKAIQEAVTDGIMIKYNAEPNSVS
JGI25131J35506_10668021	3300002511	Marine	MASNIKYPENSCVWYIEGDNFVLLTNVDSSGNLNTTERKNWKAIQEAVTDGILIKYYAE
JGI25133J35611_100075787	3300002514	Marine	MASSIKYPEDNARWFIEGDKFCLITNVDSDGDTRSVSRKQWKAISE
JGI25134J35505_100043177	3300002518	Marine	MASSIKYPEDNARWFIEGDKFCLITNVDSDGDTRSVSRKQWKAISEAVTDGVXTXLLC*
JGI25134J35505_101381122	3300002518	Marine	MASSIKYPDSSASWYIEGDKFALITNVDSSGSGRTTARKQWKAIAEAVTDGXLLHYYGXPNKV
JGI25136J39404_11116172	3300002760	Marine	MASNIKYPDEDAVWYIEGDKLALLTNVDSEGDTRTNTKGGRKLWKAIAESVTDGLLLHYHGEP
FS900DNA_108401982	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MASNITYPDSSCRWFIEGDSLCLITNVDSSGTVNTTARKEWKAIQEAVTDGILLFYNAEPNNV
Ga0075447_102365052	3300006191	Marine	MASSITYPDDRARWFIEGDKLCIVTNVDSSGNTRTTARKQWKAISEAVTDGLLLHYYGEP
Ga0098033_11128993	3300006736	Marine	MASNIKYPEDHSMWFIEGDKLALITDVDSSGNTVTSSRKKWKAIQEAVTDGIVLFYNAEPNKVSAITDT
Ga0098033_11665591	3300006736	Marine	MASNIKYPEDVAVWFIEGDALILLTAVDSSGTARTSTRKKWKAISEAVTDGLLVHFYAEPNKVRNLSDTPDIDNSL
Ga0098033_11741933	3300006736	Marine	MASNIKYPESTARWFIEGDKLCLITKVDSSGNTRTSARKQWKAISEAVTDGI
Ga0098035_11393303	3300006738	Marine	MASNITYPDKSIVWFVEGNKLALLSNVTVSVDSDGNVTTTTN
Ga0098058_11589663	3300006750	Marine	MASNIKYPEDHSMWFIEGDKLALITDVDSSGNTVTSSRKKWKAI
Ga0098040_10638023	3300006751	Marine	MASNIKYPESTARWFIEGDKLCLITKVDSSGNTRTSARKQWKAI
Ga0098048_10857841	3300006752	Marine	MASNITYPESTARWFIEGDKLCLVTKVDSSGNTRTSARKQWKAISEAVTDG
Ga0098039_10591191	3300006753	Marine	MASSITYPDDRARWFIEGDKLCLVTNVDSSGNTRTTARKQWKAISEAVTDGL
Ga0098039_10868053	3300006753	Marine	MASNIKYPDEDAVWYIEGDKLALLTNVDSEGDTRTNTKGGRKLWKAIAESVTD
Ga0098039_11598081	3300006753	Marine	MASSIKYPDEDAVWFIEGDKLALLTNVDSDGDTRTDAKGGRKIWKAISESVTDGLLLHYHGEPNSVNNLSD
Ga0098039_11850173	3300006753	Marine	MASNIKYPDKNCLWYIEGDRLGILSNVDGSGNTRTADRKQWKAISETIVDGMLLHYWAEPDGVSSM
Ga0098044_12305793	3300006754	Marine	MASSIKYPDSSCLYFIEGDKLALITNVDSSGTQNTSLRKRWKAIQEAVTDGILLWYHAEPNNVNS
Ga0098054_10209311	3300006789	Marine	MASNIKYPENSCVWYIEGDNFVLLTNVDSSGNLNTTERKNWKAIQEAVTDGILIKYYAEP
Ga0098045_11613752	3300006922	Marine	MASSIKYPEDNARWFIEGDKFCLITNVDSDGDTRSVSRKQWKAISEAVTDGLLLHYYAE
Ga0098034_10420201	3300006927	Marine	MASSITYPDDRARWFIEGDKLCLVTNVDSSGNTRTTARKQWKAISEAVTDGLLLHYYGEPNNVIS
Ga0098041_10626353	3300006928	Marine	MASNIKYPEDHAMWFIEGDKLALITDVDSSGNTVTSSRKKWKAIQEAVTDGIVLFYNAEPNK
Ga0098041_12806641	3300006928	Marine	MASSIKYPENQAMYFIEGDKLGLITKVDSSGDNRTSARKKWKAIAEAVTDGILLHYYA
Ga0098036_12774702	3300006929	Marine	MASSIKYPEDNARWFIEGDKFCLITNVDSDGDTRSVSRKQWKAISEAVTDGLLLHYYA
Ga0110931_10424371	3300007963	Marine	MASSITYPDDRAKWFIEGDKLCLVTNVDSDGNTRTTARKQWQAISE
Ga0098052_10646701	3300008050	Marine	MASNIQYPENSCVWFIEGDNFVLLTNVNSSGNLNTTERKNWKAIQEAVTDGILIKYYS
Ga0114898_10951871	3300008216	Deep Ocean	MASSIKYPDSSCLYFIEGDKLALITNVDSSGTQNTSLRKRWKAIQEAVTDGILLWYHAEPNNVYGLNDIPD
Ga0114899_10293411	3300008217	Deep Ocean	MASNITYPDKSMLWFIEGDKLGLLSNVDSSGNTRTTDRKQWKAISE
Ga0114905_10265541	3300008219	Deep Ocean	MASSIKYPENQAMYFIEGDKLALITKVDSSGNGRTSSRKQWKAISETVAHGILIHYY
Ga0114910_10723091	3300008220	Deep Ocean	MASNIKYPESTARWFIEGDKLCLITNVDSSGNARTTARKKWKAISESVTNG
Ga0114902_11023853	3300009413	Deep Ocean	MASNIKYPESTARWFIEGDKLCLITKVDSSGSTRTSARKQWKAIAEAVTDGIL
Ga0114902_11584742	3300009413	Deep Ocean	MASNIKYPENSCVWYIEGDNFVLLTNVDSSGNLNTTERKNWKAIQEAVTDGILIKYYA
Ga0114909_10538841	3300009414	Deep Ocean	MASNIKYPNASAMWFIEGDKIALITNLDSTGSQRTTARKQWKAIAEAVSDGLLLHFYG
Ga0114908_10619244	3300009418	Deep Ocean	MASNITYPENNAQWFIEGDKLCLITKVDSSGNARTTARKQWKAISEAVTDGLL
Ga0114908_11547231	3300009418	Deep Ocean	MASNIKYPDDRARWFIEGDKICLITNVDSDGNTRTTERKQWKAISEAVTDGLLLHYY
Ga0115558_11764991	3300009449	Pelagic Marine	MASNIKYPENDAMYFIEGDALALVTKVDSSGSGRTTARKQFKAIAES
Ga0114900_11699481	3300009602	Deep Ocean	MASSITYPDDRARWFIEGDKLCLVTNVDSDGNTRTTARKQWKAIS
Ga0114901_11446091	3300009604	Deep Ocean	MASNITYPDKSCLWFIEGDRLGIISNVDSSGNTRTSRKQWKAISEKIADGMLLHYW
Ga0114906_11507901	3300009605	Deep Ocean	MASNIKYPDKSMVWFIEGDKLGLLTNVDSSGNIRTAERKKWKAISE
Ga0114912_10418021	3300009620	Deep Ocean	MASNISYPDSSAVWYIEGDKLALITNVDSSGTARTTARKTWKAISEAVTDGVLLHYYGEP
Ga0114912_10890253	3300009620	Deep Ocean	MASNIKYPNASAMWFIEGDKIALITNLDSTGSQRTTARKQWKAIAEAVSD
Ga0114912_10955161	3300009620	Deep Ocean	MASNIKYPEDVAVWFIEGDALILLTAVDSSGTARTSTRKKWKAISEAVTD
Ga0105173_10815722	3300009622	Marine Oceanic	MASNITYPDSSCRWFVEGDSFCLITNVDSGGAASTTARKEWKAIQEAVTDGILL
Ga0098056_10200881	3300010150	Marine	MASNITYPESTARWFIEGDKLCLVTKVDSSGNTRTSARKQWKAISEAVTDGILLHYY
Ga0098056_11632363	3300010150	Marine	MASNIKYPENSCVWYIEGDNFVLLTNVDSSGNLNTTERKNWKAIQEAVTDGIL
Ga0098056_12416382	3300010150	Marine	MASSIKYPENQAMYFIEGDKLGLITKVDSSGDNRTSARKKWKAIAEAVTDGILLHYY
Ga0098061_12956892	3300010151	Marine	MASNIKYPEDNVRWFIEGDKFCLVTNVDSDGDTRSISRKQWKAISESVSDGLLLHYY
Ga0098061_13201651	3300010151	Marine	MASSIKYPDEDAVWFIEGDKLALLTNVDSDGDTRTDAKGGRKVWKAIEESVTDG
Ga0098059_12422731	3300010153	Marine	MASSIKYPDEDAVWFIEGDKLALLTNVDSSGDTRTDTKGGRKLWKA
Ga0098059_12599781	3300010153	Marine	MASSIKYPDDRARWFIDGDKLCLVTNVDSDGNTRTTARKQWKAISEAVSDGLLLH
Ga0098059_12644443	3300010153	Marine	MASNIKYPENSCVWYIEGDNFVLLTNVDSSCNLNTTERKNWKAIQEAVTDGILIKYYAEPDS
Ga0098047_100305851	3300010155	Marine	MASSIKYPDSSAVWYIEGDKFALITNVDASGNTRTTARKTWKAIGEA
Ga0098047_103137501	3300010155	Marine	MASSIKYPDDRAKWFIEGDKLCLVTNVDSDGNTRTTDRKQWQAISEAVSDGLLLHYYGEP
Ga0181374_10540401	3300017702	Marine	MASSIKYPDSSCVYFIEGDKLALVTNVDSSGTQNTSLRKRWKAIQEAVTDGLLL
Ga0181374_10685643	3300017702	Marine	MASNIKYPENSCRWFIEGDSLCLITNVDSEGDANTTARKNWKAIQE
Ga0181371_10122283	3300017704	Marine	MASSIKYPDSSCVYFIEGDKLALVTNVDSSGTQNTSLRKRWKAIQEAVTDGILLWYHAEPNNVN
Ga0181372_10373693	3300017705	Marine	MASNIKYPDSSCLYFLEGDKFALITNVDSSGTQNTSLRKRWKAIQEAVTDGLLLWYHAEP
Ga0181370_10388822	3300017715	Marine	MASNIKYPEDQSLWFIEGDNLALITNVDSSGNANTTDRKNWKAIQEAVTDGIMIKYNAEPNSV
Ga0181383_11509941	3300017720	Seawater	MASNIKYPENDAMYFIEGDALALITKVDSSGNGRTTARKQFKAIAESVTNGILLHY
Ga0181402_10258281	3300017743	Seawater	MSSSIKYPENVARWFIEGDKLCLITSVNSDGEGRTSSRKKFQAISESITDGL
Ga0181432_12085152	3300017775	Seawater	MASSIKYPDSSASWYIEGDKFALITNVDSSGSGRTTARKQWKAIAEAVTDGVLLNYYGET
Ga0181432_12328892	3300017775	Seawater	MASSITYPDDRARWFIEGDKLCLITNVDSDGNTRTTARKQWQAISEAVTNG
Ga0211538_10425221	3300020364	Marine	MASNIKYPENSCRWFIEGDSFCLITNVDSDGDANTTARKNWKAIQEAVTD
Ga0211576_104103441	3300020438	Marine	MSSSIKYPENVARWFIEGDKLCLITSVNSDGEGRTSSRKKFQAISESITDGLLVHYYGEPNSVSAITDSLDID
Ga0207889_10074564	3300025042	Marine	MASNIKYPENSCRWFIDGDSFCLITNVDSSGGANTTARKNWKAIQEAVTDGIL
Ga0207906_10342923	3300025052	Marine	MASSITYPDDRARWFIEGDKLCIVTNVDSSGNTRTTARKQWKAISEAVTDGLLLHYYGEPNNVI
Ga0208668_10629121	3300025078	Marine	MASNISYPEDVAVWFVEGDKLALITNVDSSGTARTTTRKKWKAIAESVTDGLLL
Ga0208156_10264704	3300025082	Marine	MASNIKYPENSCRWFIEGDSLCLITNVDSEGDANTTARKNWKAIQEAVTDGILLYYYA
Ga0208434_10481331	3300025098	Marine	MASSIKYPEDNARWFIEGDKFCLITNVDSDGDTRSVSRKQWK
Ga0208669_10319041	3300025099	Marine	MASSIKYPEDNARWFIEGDKFCLITNVDSDGDTRSVSRKQWKAISEAVTDGLLLHYY
Ga0208013_10213834	3300025103	Marine	MASSIKYPDDRARWFIEGDKLCLITNVDSDGNTRTTQRKQWKAISEAVSDGLLL
Ga0208013_10939413	3300025103	Marine	MASSIKYPENQAMYFIEGDKLGLITKVDSSGDNRTSARKKWKAIAEA
Ga0208793_10817841	3300025108	Marine	MASNIKYPEDQSLWFVEGDNLALITNVDSSGNANTTDRKNWKAI
Ga0208553_11434421	3300025109	Marine	MASNIKYPDEDAVWYIEGDKLALLTNVDSEGDTRTNTKGGRKLWKAIAESVT
Ga0208158_10359393	3300025110	Marine	MASNINYPDSSARYFIEGDKLALITNVDSSGSSRTVARKEWKAIAEAVSDGLLLHF
Ga0209644_10537611	3300025125	Marine	MASSIKYPDSSAVWYIEGDKFALITNVDASGNTRTTARKTWKAIG
Ga0209337_12660953	3300025168	Marine	MASSIKYPDKSAVWYIEGDKLALLTTVDSSGSTRTTARKQWKAISEAVSNGVLIHYYGEPNK
Ga0207880_10667032	3300025247	Deep Ocean	MASSIKYPDSSAVWYIEGDKFALITNVDASGNSRTTARKTWKAIGEAVTDGVLLHYYGEP
Ga0207904_10751332	3300025248	Deep Ocean	MASNITYPDSSCRWFVEGDSFCLITNVDSSGTANTTARKKWKAIQEAVTDGILLYYY
Ga0208029_10791951	3300025264	Deep Ocean	MASNIKYPDEDAVWYIEGDKLALLTNVDSEGDTRTNTKGGRKLWKAIAESVTDGLLLHYHGEPN
Ga0207894_10531953	3300025268	Deep Ocean	MASSIKYPDSSAVWYIEGDKFALITNVDASGNTRTTARKTWKAIGE
Ga0208180_10861921	3300025277	Deep Ocean	MASNISYPDSSAVWYIEGDKLALITNVDSSGSARTTARKQWKAIAEAVTDGVLLHYYGEPNKVR
Ga0208449_10979381	3300025280	Deep Ocean	MASNIKYPDDRARWFIEGDKICLITNVDSDGNTRTTERKQWKAISE
Ga0208030_10672691	3300025282	Deep Ocean	MASNITYPDKSMLWFVEGDKLALLTNVDSSGNTRTTDRKQWKAVSESVYEGI
Ga0208030_11436601	3300025282	Deep Ocean	MASNIKYPEDVAVWFIEGDALILLTAVDSSGTARTSTRKKWKAISEAVTDGLLVHFYAEPNKVRNL
Ga0208315_10081338	3300025286	Deep Ocean	MASNIKYPEDVAVWFIEGDALILLTAVDSSGTARTSTRKKWKAISEAVTDGLLVHFYAEPNKVRN
Ga0208315_10177391	3300025286	Deep Ocean	MASNITYPDKSMLWFIEGDKLGLLSNVDSSGNTRTTDRKQWKAISEAVTEGILLSYQGEPNK
Ga0208181_10431311	3300025300	Deep Ocean	MASSIKYPDDRARWFIEGDKLCLITNVDSDGNTRTTQRKQWKAIS
Ga0208450_10643801	3300025301	Deep Ocean	MASSIKYPENQAMYFIEGDKLALITKVDSSGNGRTSSRKQWKAISE
Ga0208450_10717983	3300025301	Deep Ocean	MASNISYPDSSAVWYIEGDKLALITNVDSSGDARTTARKTWKAISEAVTDGVL
Ga0208684_11143791	3300025305	Deep Ocean	MASNIKYPEDVAVWFIEGDALILLTAVDSSGTARTSTRKKWKAISEAVTDGLLVHFY
Ga0208560_10257381	3300026115	Marine Oceanic	MASNIQYPENSCVWFIEGDNFVLLTNVNSSGNLNTTERKNWKAIQEAVTDGILIKYYSEPEAVS
Ga0208560_10282761	3300026115	Marine Oceanic	MASSIKYPDDRARWFIEGDKLCLVTNVDSDGNTRTTARKQWKAISE
Ga0208409_10704003	3300026212	Marine	MASNIKYPENSCRWFIEGDSFCLITNVDSDGDANTTARKNWKAIQEAVTDGI
Ga0256382_11654432	3300028022	Seawater	MASSIKYPDSSAVWYIEGDKLALITNVDASGNARTTARKTWKAIGEAVTNGVLPF
Ga0310342_1026978003	3300032820	Seawater	MASNITYPDDRAEWFIDGDKLCLITNVDSSGNTRTTARKQWKAI
Ga0326741_061491_468_626	3300034654	Filtered Seawater	MASNITYPDDVARWFIEGDKLCLITKVDSSGSARTTVRKQWKAISEAVTDGLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103553

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences