Metagenome Family F103507

Overview

Basic Information

• Family ID: F103507
• Family Type: Metagenome
• Number of Sequences: 101
• Average Sequence Length: 63 residues
• Representative Sequence: MPLIAWGFLGLQALIVIASLLGYGIFTSRPDLLIQVDPQARFFTWAFHGFAVGNMLFGGLAV
• Number of Associated Samples: 91
• Number of Associated Scaffolds: 101

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 87
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.861 % of family members)
• Environment Ontology (ENVO): Unclassified (34.653 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (32.673 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 61.11%
  β-sheet: 0.00%
  Coil/Unstructured: 38.89%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00494	SQS_PSY	48.51
PF01494	FAD_binding_3	7.92
PF01593	Amino_oxidase	6.93
PF02801	Ketoacyl-synt_C	1.98
PF04240	Caroten_synth	0.99
PF01266	DAO	0.99
PF08338	DUF1731	0.99
PF13823	ADH_N_assoc	0.99
PF00348	polyprenyl_synt	0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	48.51
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	15.84
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	7.92
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	7.92
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	7.92
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.99
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.99
COG2324	Uncharacterized membrane protein	Function unknown [S]	0.99

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.25%
Host-Associated	Host-Associated	24.75%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.45%
Plants	Host-Associated → Plants	24.75%
Aquatic	Environmental → Aquatic	19.80%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.81%
Marine	Environmental → Aquatic → Marine	6.93%
Sediment	Environmental → Aquatic → Sediment	6.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.94%
Freshwater	Environmental → Aquatic → Freshwater	4.95%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.99%
Floodplain	Environmental → Terrestrial → Floodplain	0.99%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.86%
Loam	Environmental → Terrestrial → Soil → Loam	7.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Lake	Environmental → Aquatic → Freshwater → Lake	1.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.99%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.86%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	7.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.98%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.99%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.99%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental
3300014313	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1	Environmental
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental
3300015372	Soil combined assembly	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental
3300026003	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)	Environmental
3300026032	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1 (SPAdes)	Environmental
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1000548622	3300000559	Soil	MSINGGEMQFIPWLFLIAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFYTWAFHGFA
F14TC_1067700481	3300000559	Soil	MQFVAWGFLILQALIVIASLLXXXXXXXXPDLLILIDPQARFFTWAFHGFAVGNMLFGGLAVIADALVRNR
JGI11643J12802_102934111	3300000890	Soil	MHYIPWLFLIVQGAIVVASLLGYGIFTSRPELLIQIDPGARFFTWAFYGFAVGNMLFGGLAVVAEAV
JGI11643J12802_115091822	3300000890	Soil	MNLLNYLPGTFLALQAAIVIASLLGYGLFTSRPDLLAQFDPQAKFFVWAFHGFAV
JGI10216J12902_1234962171	3300000956	Soil	MQIVAWGLLILQALIVVASLLGYGIFTSRPDLLIQVDPQARFFTWAFYGFAVGNMLFGGL
F14TB_1050643902	3300001431	Soil	MQFVAWGFLILQALIVIASLLGYGIFTARPDLLILIDPQARFFTWAFHGFAVGNMLFG
Ga0055468_101253192	3300003993	Natural And Restored Wetlands	MNLLKYLPGTFLALQAAIVLASLLGYGLFTSRPDLLAQFDPQAKFFVWAFQGFAVGNMLFGGLAVCAEA
Ga0055467_100025891	3300003996	Natural And Restored Wetlands	MHFVPWIFLALQAAIVVASLLGYGIFTSRPDLLMKVDPQAKFFTWAFHGFAVGNMLFG
Ga0055472_100159391	3300003998	Natural And Restored Wetlands	MKFFNFVPWIILALQAAIVIASLLGYGIFTSRPDLLAYIDPQARFFTWAFHG
Ga0055437_100588892	3300004009	Natural And Restored Wetlands	MQMVAWGLLVLQAMIVIASVLGYGVFTSRPDLLMQVDPQARFFTWAFHGFA
Ga0055436_102837762	3300004024	Natural And Restored Wetlands	MQTVAWGFLVLQALIVIASLLGYGIFTARPDLLMQVDPQARFFTWAFHGFAVGNMLFGGLAVVTDAIDRNKAAAFY
Ga0055485_100029481	3300004067	Natural And Restored Wetlands	MPLIAWGFLGLQALIVIASLLGYGIFTSRPDLLIQVDPQARFFTWAFHGFAVGNMLFGGLAV
Ga0066398_100853922	3300004268	Tropical Forest Soil	MQLIPWIFLIAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFFTWAFYGFAVGNMLFGGLAVVAESMLHERGRAI
Ga0063356_1014074531	3300004463	Arabidopsis Thaliana Rhizosphere	MSLLPWIFLAFQTAIVLGSLLGFGIFTSRPDLLAAVDPGARFFLWAFHGFAILNIVFGGVAVVVEAVLRNRVKILWTAG
Ga0065705_103519401	3300005294	Switchgrass Rhizosphere	MFSELKKTSVNGREMQFIPWLFLVAQAGIVVASLLGYGIFTSRPDLLVEVDPQARFFTWAFHGFAVGNMLFGGLAVV
Ga0070683_1006718721	3300005329	Corn Rhizosphere	MLIIGWFFLGIQAAIVIASLLGYGIFTARPDLLAQVDPQARFFVWAFQGFAVGNMLFGGLAVLADALRTDR
Ga0068867_1003988701	3300005459	Miscanthus Rhizosphere	MLIIGWFFLGVQAAIVIGSLLGYGIFTARPDLLAQVDPQAKFFVWAFQGFAVGNMLFGGL
Ga0070672_1001186463	3300005543	Miscanthus Rhizosphere	MLIIGWFFLGVQAAIVIGSLLGYGIFTARPDLLAQVDPQAKFFVWAFQGFAVGNMLFGGLAVLA
Ga0066905_1008991751	3300005713	Tropical Forest Soil	MQFIPWLFLIAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFFTWAFHGFAVGNMLFGGLAVVVESI
Ga0075432_100933332	3300006058	Populus Rhizosphere	MSIVPWLFLAVQGAIVVASLLGYGIFTARPDLLLQVDPQAKFFTWAFHGFAVGN
Ga0079037_1005420162	3300006224	Freshwater Wetlands	MQFVAWGFLVLQALIVIASLMGYGIFTARPDLLIKIDPQARFFTWAFHGFAVGNMLFGGLAV
Ga0075421_1003633113	3300006845	Populus Rhizosphere	MSIVPWLFLAVQGAIVVASLLGYGIFTARPDLLLQVDPQAKFFTWAFHGFAVGNMLFGGLAVVA
Ga0075421_1017942401	3300006845	Populus Rhizosphere	MLIIGWVFLGIQAAIVIASLLGYGIFTARPDLLVQVDPQAKFFIWAFQGFAVGNMLFGG
Ga0075433_100718781	3300006852	Populus Rhizosphere	MFSELKKTLVNGGGMQFIPWIFLIAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFFTWAFYGFAVGNMLFG
Ga0075425_1015175911	3300006854	Populus Rhizosphere	MLIIGWVFLGIQAAIVIASLLGYGIFTARPELLVQVDPQAKFFIWAFQGFAVGNMLFGGLAVLANALRTDRSNAL
Ga0075425_1030586601	3300006854	Populus Rhizosphere	MLIIGWVFLGIQAAIVIASLLGYGIFTARPDLLAQVDPQARFFVWAFQGFAVGNMLFGGLAVLA
Ga0075434_1012056312	3300006871	Populus Rhizosphere	MLIIGWFFLGVQAAIVIGSLLGYGIFTARPDLLAQVDPQAKFFVWAFQGFAVGNMLFGGLAV
Ga0079215_106745251	3300006894	Agricultural Soil	MHYIPWLCLIVQGAIVAASLLGYGIFTSRPELLIQLDPGARFFTWTFYGFAVGNMLFGGLAVVAEAVLRDRTSGLWA
Ga0075419_110243001	3300006969	Populus Rhizosphere	MQIFAWGLLILQALIVVASLLGYGIFTARPDLLMQVDPQARFFTWAFHGFAIGN
Ga0105245_118101892	3300009098	Miscanthus Rhizosphere	MLIIGWFFLGIQEAIVMGSLLGYGIFTARPDLLVQVDPQAKFFVWAFQAFAVGNILFGGL
Ga0111538_121132552	3300009156	Populus Rhizosphere	MLIIGWFFLGIQAAIVIASLLGYGIFTARPDLLAQVDPQARFFVWAFQGFAVGNMLF
Ga0105092_101886871	3300009157	Freshwater Sediment	MQFIPWLFLMAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFFTWAFHGFAVGNMLFGGLAVVAESILRNRIRVIVALAA
Ga0075423_129675552	3300009162	Populus Rhizosphere	MLIIGWVFLGIQAAIVIASLLGYGIFTARPDLLAQVDPQARFFVWAFQGFAVGNMLFGGL
Ga0126307_105366641	3300009789	Serpentine Soil	MQLVAWSFLVLQALIVVASLLGYGIFTARPDLLMMIDPQARFFTWAFHGFAVGNMLFGGLAVV
Ga0126311_114135582	3300010045	Serpentine Soil	MNFFPWIFLSIQGAIVIASLLGYGIFTSRPDWLAQVDPQARFFTWAFYGFAIGNMLFGGLAVLAD
Ga0126376_103941541	3300010359	Tropical Forest Soil	MQLIPWIFLIAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFFTWAFYGFAVGNMLFGGLAVVAESMLHERGRAIV
Ga0126379_100351365	3300010366	Tropical Forest Soil	MLILAWFFLGFQAAIVIASLLGYGIFAARPDLLAQVDPQAKFFVWAFQGFAVGNMLF
Ga0134126_100562911	3300010396	Terrestrial Soil	MLIIGWFFLGVQAAIVIGSLLGYGIFTARPDLLAQVDPQAKFFVWAFQGFAIGNMLFGGLAVLANA
Ga0134122_103953842	3300010400	Terrestrial Soil	MLIIGWFFLGIQAAIVIGSLLGYGIFTARPDLLVQVDPQAKFFVWAFQGFAIGNM
Ga0134123_103325201	3300010403	Terrestrial Soil	MYFIPWIFLALQGAIVIGSLLGYGIFTARPDLLIKVDPQASFFTWAFHGFAVGNMLFGGLAVVADALWRD
Ga0134123_111354392	3300010403	Terrestrial Soil	MLIIGWFFLGVQAAIVIGSLLGYGIFTARPDLLAQVDPQAKFFVWAFQGFAVGNMLFGGLAVLANALRTDRLKAL
Ga0124850_10158863	3300010863	Tropical Forest Soil	MLILAWFFLGLQAAIVIASLLGYGIFAARPDLLAQVDPQAKFFVWAFQGFAVGNMLF
Ga0137427_101195631	3300011445	Soil	MQFVAWGFLVLQALIVIASLMGYGIFTARPDLLIKIDPQARFFTWAFHGFAVGNMLFGGLAVAADAWLRN
Ga0137338_11474631	3300012174	Soil	MYIIPWVFLALQAAIVIASLLGYGIFTSRPDLLIQVDPQARFFTWAFHGFAVGNMLFGGLAVVADAILRNRMPALFA
Ga0157339_10480321	3300012505	Arabidopsis Rhizosphere	MSIVPWLFLAVQAAIVIASLLGYGIFTARPDLLMQVDPQAKFFTWAFHGFAVGNMLFGGLAVVADALWTDR
Ga0157330_10000944	3300012514	Soil	MSIVPWLFLAVQAVIVVASLLGYGIFTARPDLLIQVDPQAKFFIWAFHGFAVGN
Ga0157310_104083681	3300012916	Soil	MLIIGWVFLGVQAAIVIASLLGYGIFTAHPDLLVQVDPQAKFFVWAFQGFAVGNMLFGGLAV
Ga0126375_116620042	3300012948	Tropical Forest Soil	MQLIPWIFLIAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFFTWAFYGFAVG
Ga0126369_126167342	3300012971	Tropical Forest Soil	MQLIPWIFLIAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFFTWAFYSFAVGNMLFGGLAVVAESMLHERGRAIVAFV
Ga0164309_100280741	3300012984	Soil	MLIIGWFFLGIQAAIVIASLLGYGIFTARPDLLAQVDPQAKFFVWAFQGFAI
Ga0157375_135324481	3300013308	Miscanthus Rhizosphere	MQMVAWGFLILQALIVIASLLGYGIFTARPDLLMQVDPQARFFTWAFHGFAIGNMFFGGLAVVADA
Ga0075301_11648002	3300014262	Natural And Restored Wetlands	MYCVAWILLAVQAGIVIASVLGYGIFTSRPDLLVQVDPQAHFFTWAFHGFAVGNM
Ga0075314_10157243	3300014265	Natural And Restored Wetlands	MNFFNFVPWILLGLQAAIVIASLLGYGIFTSRPDLLAYIDPQARFFTWAFHGFAVGNMLFGGLAVC
Ga0075309_10022021	3300014268	Natural And Restored Wetlands	MNFFNFVPWILLGLQAAIVIASLLGYGIFTSRPDLLAYIDPQARFFTWAFHGFAV
Ga0075323_10489201	3300014301	Natural And Restored Wetlands	MKQVFQGGRSMNFVPWLFLALQAAIVIASLLGYGIFASRPDLLVQVDPQARFFAWAFHGFAVGN
Ga0075347_10388401	3300014313	Natural And Restored Wetlands	MTFDFVGGKAMQFVAWGFLVLQALIVVASLLGYGIFTARPDLLILIDPQARFFTW
Ga0075343_11775921	3300014317	Natural And Restored Wetlands	MTFEFVGGKAMQFVAWGFLVLQALIVVASLLGYGIFTARPDLLILIDPQARFFTWAFHGFAVGNMLFGGL
Ga0075342_11491291	3300014320	Natural And Restored Wetlands	MHFIPWLFLGVQAVIVIASLLGYGIFTSRPDLLMQVDPQARFFVWAFHGFAVGNMLFGGLAVWAE
Ga0173483_103439922	3300015077	Soil	MHYIPWLGLIVQGAIVVGSLLGYAIFTSRPELLTQVDPGARFFTWAFYGFAIGNMFFGGLAVVAEAILRDRT
Ga0132256_1017661552	3300015372	Arabidopsis Rhizosphere	MLIIGWFFLVIQAAIVIASLLGYGIFTAHPDLLVQVDPQAKFFIWAFQGFA
Ga0132256_1034163411	3300015372	Arabidopsis Rhizosphere	MSIVPWLFLAVQAAIVIASLLGYGIFTARPDLLMQVDPQAKFFIWAFHGFAVGNMLFGGLAVVADALWTD
Ga0132255_1016967651	3300015374	Arabidopsis Rhizosphere	MLIIGWFFLVIQAAIVIASLLGYGIFTARPDLLVQVDPQAKFFIWAFQGFAVGNMLFGGLAVLANALRTDRWKAL
Ga0184629_100826151	3300018084	Groundwater Sediment	MHFVAWGFLVLQALIVVASLLGYGIFTSRPDLLMQVDPQARFFTWAFHGFAVGNMLFG
Ga0184629_106048702	3300018084	Groundwater Sediment	MYFLAWMLLALQAGIVIASLLGYGIFTSRPDLLIKVDPQARFFTWAFHGFAIGNMLFG
Ga0184629_106048722	3300018084	Groundwater Sediment	MYFFAWIVLALQAGIVIASLLGYGIFTSRPDLLIKVDPQARFFTWAFHGFAIGNMLFG
Ga0190272_128043012	3300018429	Soil	MQFVAWGFLVLQALVVVASLLGYGIFTARPDLLLQFDPQARFFTWAFHGFAVGNMLFGGLAVVADAWLRN
Ga0190275_112426392	3300018432	Soil	MHYIPWLLLALQGGIVAASLLGYGIFTSRPELLTQLDPGARFFTWAFYGFAVGNMLFGGLAVVAEAVLR
Ga0190268_104494942	3300018466	Soil	MQFVAWAFLVLQALIVVASLLGYGIFTSRPDLLMQFDPQARFFTWAFHGFAVGNMLFGGLAV
Ga0190264_104509282	3300019377	Soil	MTFLYFLPWILLGLQSAIVLASLLGYGIFTSRPDLLAHFDPQARFFTWAFHGFA
Ga0190264_113917112	3300019377	Soil	MHYIPWLFLVFQCAIVIASLLGYGIFTSRPELLLQVDPGARFFTWAFYGFAVGNMLFGGLAVVAEAVLRDGK
Ga0193739_10393591	3300020003	Soil	MHIVPWVLLAIQAAIVIASLLGYGIFTSRPDLLIQVDPQARFFTWAFHGFAVGNML
Ga0194121_100396665	3300020200	Freshwater Lake	MHLIPWILLAVQAAIVVASLLGYGIFTARPDLLMQVDPQARFFTWAFSGFAIGNMLFGGLAVVADALMRNR
Ga0222623_101210771	3300022694	Groundwater Sediment	MQFIPWLFLIVQAGIVVASLLGYAIFTSRPDLLMQVDPQARFFVWAFHGFAVGNMLFSGLAVLAEGVLYD
Ga0222622_106041122	3300022756	Groundwater Sediment	MQFIPWLFLIVQAGIVVASLLGYAIFTSRPDLLMQVDPQARFFVWAFHGFAVGNMLFSGLAVLA
Ga0209172_105114291	3300025310	Hot Spring Sediment	MRLIPSVFLCIQAGIVVASLLGYGIFTSRPDLLAQVDPQARFFVWAFHGFAVGNMLFGGLAVATDALLRNK
Ga0207709_104430082	3300025935	Miscanthus Rhizosphere	MLIIGWFFLGVQAAIVIGSLLGYGIFTARPDLLAQVDPQAKFFVWAFQGFAVGNVL
Ga0207704_104037351	3300025938	Miscanthus Rhizosphere	MLIIGWFFLGIQAAIVIGSLLGYGIFTARPDLLVQVDPQAKFFVWAFQGFAIGNMLFGGL
Ga0207665_103661351	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLIIGWFFLGIQAAIVIASLLGYGIFTARPDLLAQVDPQAKFFVWAFQGFAIGNMLFGGL
Ga0210116_10132763	3300025959	Natural And Restored Wetlands	MHFIPWLFLGVQAVIVIASLLGYGIFTSRPDLLMQVDPQARFFVWAFHGFAVGNMLFGGLAVW
Ga0208284_10008251	3300026003	Rice Paddy Soil	MMNLLNYLPGIFIATQAAIVVASLLGYGIFTSRPDLLAQFDPQAKFFVWAFHGFAVGN
Ga0208419_10009074	3300026032	Natural And Restored Wetlands	MNFFNFVPWILLGLQAAIVIASLLGYGIFTSRPDLLAYIDPQARFFTWAFHGFAVG
Ga0209819_101243211	3300027722	Freshwater Sediment	MHYIPWLCLIVQGAIVAASLLGYGIFTSRPELLIQLDPGARFFTWAFYGFAVGNMLFGGLAVVAEAVLRDR
Ga0209481_107480591	3300027880	Populus Rhizosphere	MQIVAWGLLILQALIVVASLLGYGIFTARPDLLMQVDPQARFFTWAFHGFAIGN
Ga0209382_110216602	3300027909	Populus Rhizosphere	MLIIGWVFLGIQAAIVIASLLGYGIFTARPDLLVQVDPQAKFFIWAFQGFAVGNMLFGGLAVLANALGM
Ga0268265_125663751	3300028380	Switchgrass Rhizosphere	MQFVAWGFLVLQSLIVVASLLGYGIFTSRPDLLMQVDPQARFFTWAFHGFAVGNMLFGGLAVVADALL
Ga0307498_103771362	3300031170	Soil	MNFVPWMFLAFQAAIVVASLLGYGIFTSRPDLLAQVDPQARFFTWAFSGFAIGN
Ga0307497_105916341	3300031226	Soil	MSLVPWLFLAVQAAIVVASLLGYGIFTARPDLLIQVDPQAKFFAWAFHGFAVGNMLFGGLAVV
Ga0307497_106600252	3300031226	Soil	MQIVAWGLLVLQALIVVASLLGYGIFTSRPDLLMQVDPQARFFTWAFHGFAVGNMLFGGLAVVADAFDRNR
Ga0299913_108334891	3300031229	Soil	MHFIPWFFLILQSGTVVASLLGYGIFTSRPDLLVQVDPGARFFTWAFHGFAVGNMLFGGLAVV
Ga0310888_100278004	3300031538	Soil	MQIVAWGFLVVQALIVVASLLGYGIFTARPDLLILIDPQARFFTWAFHGFAVGNMLFGGLAVVADTLV
Ga0310813_101740933	3300031716	Soil	MLIIGWFFLVIQAAIVIASLLGYGIFTARPDLLVQVDPQAKFFIWAFQGFAVGNMLFGGLAVVANALRTDRWKALW
Ga0307468_1004446401	3300031740	Hardwood Forest Soil	MSIVPWLFLAVQAVIVVASLLGYGIFTARPDLLMQVDPQAKFFIWAFHGFAVGNMLFG
Ga0310903_106048432	3300032000	Soil	MGELSRSLGGTTMQIVAWGFLVVQALIVVASLLGYGIFTARPDLLILIDPQARFFTWAFHGFAVGNMLFGGLAVV
Ga0307415_1016787931	3300032126	Rhizosphere	MQLVAWGFLVLQALIVVASLLGYGIFTARPDLLIIIDPQARFFTWAFHGFAVGNMLFG
Ga0335085_102181081	3300032770	Soil	MNFIPWIFLVLQAAIVVGSLLGYGIFTARPDLLVQVDPQAKFFVWAFHGFAVGNMLFGGLAVA
Ga0335081_104579693	3300032892	Soil	MNFIPWIFLAIQAGIVIASLLGYGIFTARPDLLAQVDPQAKFFVWAFHGFAV
Ga0335076_115952642	3300032955	Soil	MNFIPWIFLAIQAGIVIASLLGYGIFTARPDLLAQVDPQAKFFVWAFHGFAVGNMLFGGL
Ga0334722_112776051	3300033233	Sediment	MQMVAWSFLVLQTLIVIASLLGYGIFTSRPDLLMKVDPQARFFTWAFYGFAV
Ga0316605_124419651	3300033408	Soil	MQFVAWGFLVLQALIVIASLMGYGIFTARPDLLIQVDPQARFFTWAFHGFAVGNMLFGGLAVVADAWLRNRRA
Ga0316630_118531921	3300033487	Soil	MQFVAWGFLVLQALIVIASLMGYGIFTARPDLLIQVDPQARFFTWAFHGFAVGNMLFGGLAVVADA
Ga0364931_0215715_3_185	3300034176	Sediment	MQFIFWLFLIAQAGIVVASLLGYGIFTSRPDLLVQVDPQARFFTWAFHGFAVGNMLFGGL