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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F103469 |
| Family Type | Metagenome |
| Number of Sequences | 101 |
| Average Sequence Length | 42 residues |
| Representative Sequence | MTDTWKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVR |
| Number of Associated Samples | 88 |
| Number of Associated Scaffolds | 101 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 87 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.34 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.663 % of family members) |
| Environment Ontology (ENVO) | Unclassified (19.802 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (44.554 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 16.90% β-sheet: 11.27% Coil/Unstructured: 71.83% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.34 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 101 Family Scaffolds |
|---|---|---|
| PF05036 | SPOR | 25.74 |
| PF03466 | LysR_substrate | 2.97 |
| PF06041 | DUF924 | 0.99 |
| PF01149 | Fapy_DNA_glyco | 0.99 |
| PF13646 | HEAT_2 | 0.99 |
| PF13591 | MerR_2 | 0.99 |
| PF00226 | DnaJ | 0.99 |
| COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
|---|---|---|---|
| COG0266 | Formamidopyrimidine-DNA glycosylase | Replication, recombination and repair [L] | 0.99 |
| COG3803 | Uncharacterized conserved protein, DUF924 family | Function unknown [S] | 0.99 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 33.66% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 6.93% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 5.94% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 3.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.96% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 3.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.97% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.97% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.97% |
| Agave | Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave | 2.97% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.98% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.98% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.99% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.99% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.99% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.99% |
| Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil | 0.99% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.99% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.99% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.99% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.99% |
| Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 0.99% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.99% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.99% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.99% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.99% |
| Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.99% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.99% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.99% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Host-Associated | Open in IMG/M |
| 3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005541 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 | Environmental | Open in IMG/M |
| 3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
| 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009661 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 | Environmental | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300010364 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300012359 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300017939 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG | Environmental | Open in IMG/M |
| 3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300017973 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG | Environmental | Open in IMG/M |
| 3300018058 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG | Environmental | Open in IMG/M |
| 3300018062 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300019866 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1 | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
| 3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
| 3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021402 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O | Environmental | Open in IMG/M |
| 3300021439 | Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03 | Environmental | Open in IMG/M |
| 3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
| 3300022557 | Paint Pots_combined assembly | Environmental | Open in IMG/M |
| 3300023079 | Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4 | Environmental | Open in IMG/M |
| 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes) | Environmental | Open in IMG/M |
| 3300027014 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes) | Environmental | Open in IMG/M |
| 3300027516 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes) | Environmental | Open in IMG/M |
| 3300027591 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027718 | Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027771 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027809 | Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027869 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027879 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes) | Environmental | Open in IMG/M |
| 3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300030618 | II_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031232 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3 | Environmental | Open in IMG/M |
| 3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
| 3300031572 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19 | Environmental | Open in IMG/M |
| 3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
| 3300031681 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20 | Environmental | Open in IMG/M |
| 3300031723 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23 | Environmental | Open in IMG/M |
| 3300031724 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20 | Environmental | Open in IMG/M |
| 3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
| 3300031777 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24 | Environmental | Open in IMG/M |
| 3300031819 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300031894 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18 | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
| 3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
| 3300032009 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19 | Environmental | Open in IMG/M |
| 3300032041 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22 | Environmental | Open in IMG/M |
| 3300032055 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23 | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300032063 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17 | Environmental | Open in IMG/M |
| 3300032065 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20 | Environmental | Open in IMG/M |
| 3300032074 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
| 3300032893 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1 | Environmental | Open in IMG/M |
| 3300032955 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5 | Environmental | Open in IMG/M |
| 3300033134 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2 | Environmental | Open in IMG/M |
| 3300033158 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI24744J21845_100804281 | 3300002077 | Corn, Switchgrass And Miscanthus Rhizosphere | MSEAPKRRLLDEIGTSPTFVADGCILTGDLETNGPIVVCGSVRGDGRI |
| Ga0062389_1012424101 | 3300004092 | Bog Forest Soil | MIERLKRRLIDQIGEAPTFVAEGSRLSGDLEATGDLILCGTIRG |
| Ga0066388_1064216192 | 3300005332 | Tropical Forest Soil | LLQEVVMSDSPKRRLLDEIGTSPTFVADGCHLTGDLETNGPIVV |
| Ga0070703_103990971 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDSRKRRLIDSIGSSPTFVAEGVRLTGDLETPGPLVVCGAVRGDGRV |
| Ga0070713_1020083801 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MSEAPKRRLIDRIGTSPTFVAEGCRLTGDLEAPGALVVCGTIRGD |
| Ga0073909_102995772 | 3300005526 | Surface Soil | MTQTLKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVRGDGKI |
| Ga0070679_1012746291 | 3300005530 | Corn Rhizosphere | MSHQPKRRLLDEIGTSPTFVADGSVITGDLELTGSIVVCGSVRGD |
| Ga0070684_1014368832 | 3300005535 | Corn Rhizosphere | MSDLPKRRLIDQLGSSPTFVAEGCHLTGDVETGGPLVVCGAIRGDG |
| Ga0070684_1018991031 | 3300005535 | Corn Rhizosphere | MSEAPKRRLIDRIGTSPTFVAEGCRLTGDLEAPGALVVCGTIRGDGHVA |
| Ga0070733_104410321 | 3300005541 | Surface Soil | MSDLHKRRLIDSIGDSPTFVAEGVRLSGDLETPGPLVLC |
| Ga0066696_101176273 | 3300006032 | Soil | MSETIKRRLIDQIGDSPTFVSEGSVLTGDLETPGPLVMCGVVR |
| Ga0097621_1005186302 | 3300006237 | Miscanthus Rhizosphere | MNDSRKRRLIDSIGSSPTFVAEGVRLTGDLETPGPLV |
| Ga0079220_110668171 | 3300006806 | Agricultural Soil | MSDLPKRRLLDEIGTSPAFVADGCVITGDLETNGPIVVCGSVRG |
| Ga0073928_106619392 | 3300006893 | Iron-Sulfur Acid Spring | MSETLKRRLIDQIGDTPTFVAEESLLTGDLETDGPLVLCGAI |
| Ga0105247_101540322 | 3300009101 | Switchgrass Rhizosphere | MSDTPKRRLVDLIGPSPTFVAEGCRLTGDVETDGPLVVCGAIRG |
| Ga0105242_128126261 | 3300009176 | Miscanthus Rhizosphere | MTDQPKRRLLDEIGTSPTFVADGCVLTGDLETHGAIVVCGSVR |
| Ga0105237_108985111 | 3300009545 | Corn Rhizosphere | MMSDLPKRRLIDQLGSSPTFVAEGCHLTGDVETGG |
| Ga0105858_12651292 | 3300009661 | Permafrost Soil | MTGNPQEHRMIDKRRLIDQIGDSPTFVAEGVRLTGDLETPGP |
| Ga0126374_105332351 | 3300009792 | Tropical Forest Soil | MTETSKRRLLDQIGDSPTFVAEGSRLTGDVETTGPLVVCGA |
| Ga0134066_104046511 | 3300010364 | Grasslands Soil | MIQTLKRRLIDQIGDSPTFVSEGSRLTGDLETSGPLVMCGAVRGDGRVA |
| Ga0126381_1012583062 | 3300010376 | Tropical Forest Soil | MAETHKRRLIDQIGDSPTFVAEGSRVSGDLETVGPLVVCG |
| Ga0134122_126838831 | 3300010400 | Terrestrial Soil | MNDSRKRRLIDSIGSSPTFVAEGVRLTGDLETPGPLVVCGA |
| Ga0137385_115959691 | 3300012359 | Vadose Zone Soil | MIQTLKRRLIDQIGDSPTFVSEGSRLTGDLETSGPLVMCGAVRGDGRVAG |
| Ga0137404_100981181 | 3300012929 | Vadose Zone Soil | MSETLKRRLIDQIGDSPTFVAEGSRLTGDLETPGPLVMCGIVRGD |
| Ga0137407_107043381 | 3300012930 | Vadose Zone Soil | MSETIKRRLIDQIGDSPTFVAEGSRLTGDLETPGPLVMCGIV |
| Ga0126369_125227242 | 3300012971 | Tropical Forest Soil | MNDTPRRRLIDQVADAPTFVAEGARLTGDLEAPGPLVVCGAV |
| Ga0126369_125988152 | 3300012971 | Tropical Forest Soil | MLDQLGESPTFVAPGSRISGDLVTLGPLVVCGAVRG |
| Ga0157375_127628471 | 3300013308 | Miscanthus Rhizosphere | MSETPKRRLVDQLGVSPTFVAEGCHLTGDVETGGP |
| Ga0187775_103355031 | 3300017939 | Tropical Peatland | MSETPKRRLLDEIGGSPTFVADGCTLTGDVETKGPLVVCGAVHGDGRI |
| Ga0187783_102113141 | 3300017970 | Tropical Peatland | MSETLKRRLMDQIGDSPTFVAEGSRLTGDVETAGPLVVCGTIRG |
| Ga0187783_102752941 | 3300017970 | Tropical Peatland | MIEALKRRLVDQVGESPTFVAEGSQLTGDLETPGPLV |
| Ga0187780_114091471 | 3300017973 | Tropical Peatland | MSEVPKRRLLDQLTGSPTFVADGCHVTGDLEAPGPLVVCGRIQ |
| Ga0187766_108830101 | 3300018058 | Tropical Peatland | MSGTLRRRLIDQIGDSPTFVAEGSRLNGDLETAGPLVV |
| Ga0187766_113794411 | 3300018058 | Tropical Peatland | MTETLRRRLMDQIGDSPTFVAEGSRVTGDFETAGPLVVCGAIRGDGR |
| Ga0187784_106048731 | 3300018062 | Tropical Peatland | MIEALKRRLVDQVGESPTFVAEGSQLTGDLETPGPLVVSGTVRGD |
| Ga0193756_10272812 | 3300019866 | Soil | MTETFKRRLIDQIGDSPTFVAEGSRLTGDLETPGPLVL |
| Ga0210399_108732582 | 3300020581 | Soil | MNDLQKRRLIDSIGDSPTFVAEGVRLTGDLETPGPLVI |
| Ga0210399_114120081 | 3300020581 | Soil | MSDAPKRRLIDQLGVSPTFVAEGCRFTGDVETTGPLVVCGTIRG |
| Ga0210404_106244901 | 3300021088 | Soil | MNDPLKRRLIDQIGDAPTFVAEGSRLTGDLETGGPLVVCGAIRG |
| Ga0210400_108888601 | 3300021170 | Soil | MGEDTQRRRMLDQLGDSPTFVAPGSRISGDLETLGPLVVCGAVRGDGRI |
| Ga0210400_111219801 | 3300021170 | Soil | MTQTLKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVR |
| Ga0210408_113651591 | 3300021178 | Soil | MNDPLKRRLIDQIGDAPTFVAEGSRLTGDLETGGPL |
| Ga0210408_114622522 | 3300021178 | Soil | MNATPKRRLIDQIGISPTFVAEGCQLTGDVETGGPLVVL |
| Ga0210388_105415701 | 3300021181 | Soil | MSDLHKRRLIDSIGDSPTFVAEGVRLSGDLETPGPLVLCGEI |
| Ga0210388_114445961 | 3300021181 | Soil | MSDAPKRRLIDQLGVSPTFVAEGCRFTGDVETTGPLVV |
| Ga0210385_107121081 | 3300021402 | Soil | MNDPQKRRLIDSVGDSPTFIAEGVRVTGDLETPGP |
| Ga0213879_102800461 | 3300021439 | Bulk Soil | MSGTLRRRLIDQIGDSPTFIAEGSRLTGDLESAGPLVVCGIVR |
| Ga0210398_102690132 | 3300021477 | Soil | VFEPRKRRLLDQIGESPTFVAPGSRLTGDLETDGPLVVCGTVRG |
| Ga0210398_108404742 | 3300021477 | Soil | MSDAPKRRLIDQLGVSPTFFAEGCRFTGDVETGGPLVVCGAIR |
| Ga0210402_117005931 | 3300021478 | Soil | MNDLQKRRLIDSIGDSPTFVAEGVRLTGDLETPGPLVICGAVRGDGRV |
| Ga0210410_102955971 | 3300021479 | Soil | MSDAPKRRLIDQLGVSPTFVAEGCRFTGDVETTGPLV |
| Ga0210409_101184151 | 3300021559 | Soil | MNDLQKRRLIDSIGDSPTFVAEGVRLTGDLETPGPLV |
| Ga0212123_108039771 | 3300022557 | Iron-Sulfur Acid Spring | MSDLPKRRLIDQLGSSPTFVAEGCQLTGDVETGGPLVVC |
| Ga0247758_10190793 | 3300023079 | Plant Litter | MSDQPKRRLLDEIGTSPTFVADGCVLTGDLETNGPIVV |
| Ga0207685_105910772 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MTQTLKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVV |
| Ga0207704_101652111 | 3300025938 | Miscanthus Rhizosphere | MNDSRKRRLIDSIGSSPTFVAEGVRLTGDLETPGPLVVCGAVRG |
| Ga0209158_10202045 | 3300026333 | Soil | MSETIKRRLIDQIGDSPTFVAEGSVLTGDLETPGPLVMCGIVRGDGR |
| Ga0207815_10305381 | 3300027014 | Tropical Forest Soil | MTETSKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAIRGDG |
| Ga0207761_10824391 | 3300027516 | Tropical Forest Soil | MTEPLKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGS |
| Ga0209733_11742391 | 3300027591 | Forest Soil | MSETPKRRLIDQLGDSPTFVAEGSRLTGDLETPGPLVMCGVVRGDGRV |
| Ga0209795_101486122 | 3300027718 | Agave | MSDQPKRRLLDEIGTSPTFVADGAVLTGDLETNGAIVVCGHVRGDGRIGGAL |
| Ga0209279_101552202 | 3300027771 | Marine | MSDSPKRRLIDHLGGSPTFVAEGCQVTGDVETGGPLVVCGAIRGDG |
| Ga0209574_103453271 | 3300027809 | Agave | MADAPKRRLLDEIGTSPTFVADGCVLTGDLETNGPIVVCGHVRGDGR |
| Ga0209574_103763102 | 3300027809 | Agave | MTDQPKRRLLDEIGTSPTFVADGCVLTGDLETNGAIVVCGSVRGDGR |
| Ga0209167_106454062 | 3300027867 | Surface Soil | MIETLKRRLIDQIGDAPTFVAEGSRLTGDLETTGPLVLCGAVRGDGRV |
| Ga0209579_100334241 | 3300027869 | Surface Soil | MITSLKRRLLDKLGEAPSFITEGSRVTGDVETTGSLVVCGTNRG |
| Ga0209169_100646793 | 3300027879 | Soil | MIATLKRRLMDQLQAGEAPTFVTVGSRVTGDIEAAGPLVVCGSVRGD |
| Ga0209488_107568061 | 3300027903 | Vadose Zone Soil | MSETFKRRLIDQIGDSPTFVAEGSRLTGDLETPGPLVM |
| Ga0311354_100586891 | 3300030618 | Palsa | MNDPQKRRLIDSVGESPTFIAEGVRVTGDLETPGPLVVCG |
| Ga0170834_1031661362 | 3300031057 | Forest Soil | MADTLKRRLLDQIGDSPTFVAEGSCITGDLETAGPLVVCGSVAGDGRVAG |
| Ga0302323_1023835292 | 3300031232 | Fen | MSDLPKRRLIDQLGSSPSFVAEGCHLTGDVETGGPL |
| Ga0318516_106439542 | 3300031543 | Soil | MTETSKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVV |
| Ga0318515_107231231 | 3300031572 | Soil | MTDAPKRRLLDQLGGSPTFVAEGCQLTGDVETPGPLVVCGSVRG |
| Ga0318561_104050422 | 3300031679 | Soil | MTDTWKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVRGDGRI |
| Ga0318572_105389691 | 3300031681 | Soil | MTETWKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVRG |
| Ga0318572_106776422 | 3300031681 | Soil | MAEPLKRRLLDQIGESPTFVTEGSRITGDLESNGPLVVCGTVTGDGRV |
| Ga0318493_104352892 | 3300031723 | Soil | MTETSKRRLIDQIGDSPTFVAEGSRVTGDLETTGPLV |
| Ga0318500_101148472 | 3300031724 | Soil | MTETLKRRLMDQIGDSPTFVAEGSRVTGDFETSGPLVVCGAIRGDHCGTG |
| Ga0318500_101951882 | 3300031724 | Soil | MTETSKRRLIDQIGDSPTFVAEGSRVTGDLETVGPLV |
| Ga0318502_104779271 | 3300031747 | Soil | MTETSKRRLIDQIGDSPTFVAEGSRVTGDLETTGPLVVCGAI |
| Ga0318543_104379591 | 3300031777 | Soil | MTETLKRRLMDQIGDSPTFVAEGSRVTGDFETSGPLVVCGAI |
| Ga0318568_107044901 | 3300031819 | Soil | MTDTWKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVR |
| Ga0307478_102331571 | 3300031823 | Hardwood Forest Soil | MSETLKRRLIDQIGDTPTFVAEGSRLTGDLETDGPLVLCGA |
| Ga0318522_100045965 | 3300031894 | Soil | MTDTWKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVRGD |
| Ga0306921_110217722 | 3300031912 | Soil | MTETWKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVC |
| Ga0308175_1011477781 | 3300031938 | Soil | MSDQPKRRLLDEIGTSPTFVAEGCVLTGDLEANGALVVCGSVRGDGRI |
| Ga0310913_108288161 | 3300031945 | Soil | MTQTLKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCG |
| Ga0318563_101582831 | 3300032009 | Soil | MTETLKRRLMDQIGDSPTFVAEGSRVTGDFETSGPLV |
| Ga0318549_104787291 | 3300032041 | Soil | MTETSKRRLIDQIGDSPTFVAEGSRVTGDLETVGPLVVCGAV |
| Ga0318575_101169731 | 3300032055 | Soil | MAETLKRRLMDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVRGDGRI |
| Ga0318533_110554051 | 3300032059 | Soil | MTETSKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLV |
| Ga0318504_100481793 | 3300032063 | Soil | MADTLKRRLMDQIGDSPTFVAEGSRVSGDLETAGPLVVCGAVRGD |
| Ga0318513_102608792 | 3300032065 | Soil | MTETSKRRLIDQIGDSPTFVAEGSRVTGDLETAGPLVVCGAVRGDG |
| Ga0308173_116426102 | 3300032074 | Soil | MSDRDPPRRRLLDEIGTSPTFVTEGTVLTGDLETSGSIVVCG |
| Ga0307471_1037444192 | 3300032180 | Hardwood Forest Soil | MTETLKRRLMDQIGDSPTFVAEGSRLTGDVEAAGPL |
| Ga0335081_112644501 | 3300032892 | Soil | MSDVPKRRLIDQLGSSPTFVAAGCQLTGDLETAGPLVV |
| Ga0335069_121255772 | 3300032893 | Soil | MSEAPKRRLVDQFGVSPTLVAEGCRFTGDIETGGPLVV |
| Ga0335076_100562925 | 3300032955 | Soil | MSDSQKRRLIDSIGDSPTFVAEGVRITGDLETSGPLVVCGSVRG |
| Ga0335076_113801482 | 3300032955 | Soil | MSATPKRRLIDQLGSSPTFVAEGCHLTGDVETGGP |
| Ga0335073_119898801 | 3300033134 | Soil | MSDSQKRRLIDSIGDSPTFVAEGVRITGDLETSGPLVVCGSV |
| Ga0335077_115458881 | 3300033158 | Soil | MNDAPKRRLLDQLGGSPTFVAEGSRLTGDLETAGAL |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |