Metagenome Family F103461

Basic Information
Family ID	F103461
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	59 residues
Representative Sequence	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRF
Number of Associated Samples	88
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	7.92 %
% of genes from short scaffolds (< 2000 bps)	5.94 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (92.079 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (6.931 % of family members)
Environment Ontology (ENVO)	Unclassified (35.644 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.564 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.54% β-sheet: 0.00% Coil/Unstructured: 47.46%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF04909	Amidohydro_2	19.80
PF01797	Y1_Tnp	3.96
PF00072	Response_reg	1.98
PF01314	AFOR_C	1.98
PF05977	MFS_3	1.98
PF05958	tRNA_U5-meth_tr	1.98
PF00561	Abhydrolase_1	0.99
PF00890	FAD_binding_2	0.99
PF13343	SBP_bac_6	0.99
PF14384	BrnA_antitoxin	0.99
PF05378	Hydant_A_N	0.99
PF01266	DAO	0.99
PF04392	ABC_sub_bind	0.99
PF13676	TIR_2	0.99
PF02436	PYC_OADA	0.99
PF02211	NHase_beta	0.99
PF09084	NMT1	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	3.96
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.98
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	1.98
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	1.98
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.98
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.99
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.99
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.99

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.08 %
All Organisms	root	All Organisms	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.08 %
cellular organisms	root	All Organisms → cellular organisms	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.08 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	6.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.08 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.08 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	6.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.08 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.93 %

Scaffold	Taxonomy	Length	IMG/M Link
3300009678\|Ga0105252_10288930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300011435\|Ga0137426_1046186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1132	Open in IMG/M
3300012929\|Ga0137404_10098525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2353	Open in IMG/M
3300018422\|Ga0190265_10313047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1644	Open in IMG/M
3300021082\|Ga0210380_10274005	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300027573\|Ga0208454_1115173	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300032157\|Ga0315912_11343311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300033551\|Ga0247830_10074833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2311	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.26%
Host-Associated	Host-Associated	25.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.44%
Plants	Host-Associated → Plants	25.74%
Aquatic	Environmental → Aquatic	17.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.82%
Sediment	Environmental → Aquatic → Sediment	8.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.93%
Marine	Environmental → Aquatic → Marine	4.95%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Floodplain	Environmental → Terrestrial → Floodplain	1.98%
Peat	Environmental → Terrestrial → Peat	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.60%
Loam	Environmental → Terrestrial → Soil → Loam	12.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.97%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.99%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004057	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300031646	Marine microbial communities from Western Arctic Ocean, Canada - CB9_33.1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_116216582	3300000890	Soil	TKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAK
JGI10214J12806_105249703	3300000891	Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKAGLMGTAKSTHYTPRFRPFDM
JGI10214J12806_111269553	3300000891	Soil	MYRRPETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTP
JGI10214J12806_133541062	3300000891	Soil	MYRRPETKAAEEKVYRQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTP
JGI10216J12902_1063331081	3300000956	Soil	MFKRAETKATEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTHYTPRFRPFDML
Ga0055496_101892031	3300004057	Natural And Restored Wetlands	MYRRLETKAAEEKVYQQKQIGEFMTTWKDFPRPGLAAWAERSKA
Ga0055500_101648272	3300004062	Natural And Restored Wetlands	MYRRPETKSAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTRYTPRFRPFD
Ga0063356_1051263951	3300004463	Arabidopsis Thaliana Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKAGLMGTAKSTHYTPRF
Ga0062381_100453813	3300004808	Wetland Sediment	MYRRPETKAAEEKVYEQQQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTHY
Ga0065705_100455101	3300005294	Switchgrass Rhizosphere	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKA
Ga0070690_1004766771	3300005330	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKPGLMGTAKSTHYTPRFRPFDMLSIP
Ga0070666_107443731	3300005335	Switchgrass Rhizosphere	MYRRPESKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERHKAGLMGTAKSTHYTPRFRPFDMLSIPN
Ga0070694_1007145802	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKAGLMGTAKSTHYTPRFRPFDMLS
Ga0066689_105632832	3300005447	Soil	MYRRPETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAAWAGRRKAGLMGTAKS
Ga0066687_103952532	3300005454	Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKST
Ga0070681_116671101	3300005458	Corn Rhizosphere	MYRRPETKAAEEKVFKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTYYTPRFRPFDMLSIPNQSLVIL
Ga0070679_1000606435	3300005530	Corn Rhizosphere	MYRRPETKAAEEKVFKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTYYTPRFRPFDMLSIPNQSLVI
Ga0070697_1001788681	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTR
Ga0070697_1019938121	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MYRRPETKAAEEKVYKQEQIGEFMTTWKDFPRPGLAAWAERRKAG
Ga0066905_1015751821	3300005713	Tropical Forest Soil	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTHYTPRFRPFDMLSSPNQSLV
Ga0068860_1013245901	3300005843	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTR
Ga0097621_1008956641	3300006237	Miscanthus Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKPGLMGTAKSTHYTPRFRPFDML
Ga0079222_102391852	3300006755	Agricultural Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKVGLMGTAKSTHY
Ga0075431_1000706011	3300006847	Populus Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDMLSVP
Ga0075433_106898401	3300006852	Populus Rhizosphere	MYRRPETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAAWVERRKAGLMGTAKSTYYTPRF
Ga0075420_1017883882	3300006853	Populus Rhizosphere	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTHYTPRFRPFDML
Ga0075434_1023733791	3300006871	Populus Rhizosphere	MYRRPETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAAWVERRKAGLMGTAKSTYYTPRFRPFDMLSIPN
Ga0079216_102169641	3300006918	Agricultural Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPR
Ga0075418_119313731	3300009100	Populus Rhizosphere	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAG
Ga0114129_102557071	3300009147	Populus Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDMLS
Ga0105243_130033251	3300009148	Miscanthus Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRVRSFDMLSIPNQS
Ga0105092_101950651	3300009157	Freshwater Sediment	MFKRTETRAAEEKVYEQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTHYTPRFR
Ga0075423_103318721	3300009162	Populus Rhizosphere	MYRRAETNAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKSGLMGTAK
Ga0114996_107897191	3300009173	Marine	MTYRRPETDATEAKVYEQVEVGEFMTTWKDFPRPGLAAWSDRPKEGLMTKAKSTHFTPRFRPFDMIEAPNQ
Ga0105252_102889301	3300009678	Soil	MFRRPETKATEEKVYKQERIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTYYTPRFR
Ga0126384_111933811	3300010046	Tropical Forest Soil	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAK
Ga0126378_101924774	3300010361	Tropical Forest Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTRYTPRFRPFDMLSIPNQSLVIL
Ga0126377_109183631	3300010362	Tropical Forest Soil	MFKRTETKAAEEKVYQQKQIGEFMTTWKDFPRPGLAAWAERKK
Ga0126377_109821341	3300010362	Tropical Forest Soil	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTA
Ga0134122_112699621	3300010400	Terrestrial Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTRY
Ga0134123_100400084	3300010403	Terrestrial Soil	MYRRPETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAGWAERKKAGLMGTAKSTHYTPRFRPFDMLS
Ga0134123_106568421	3300010403	Terrestrial Soil	MYRRPETKAAEEKVYKQAKIGEFMTTWKDFPRPGLAAWAERRKAGLIG
Ga0124844_10669743	3300010868	Tropical Forest Soil	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKRTHYT
Ga0137422_10801352	3300011416	Soil	MYRRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAVWAERQKAGLMG
Ga0137426_10461861	3300011435	Soil	MFRRPETKATEEKVYKQERIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTYYTPR
Ga0137327_10488272	3300012173	Soil	MYRRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFR
Ga0137364_106660081	3300012198	Vadose Zone Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDMLSVPNQS
Ga0137359_108737281	3300012923	Vadose Zone Soil	MYRRPETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAAWAERRKAGLMGSAKSTRYTP
Ga0137404_100985254	3300012929	Vadose Zone Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPF
Ga0137404_114510601	3300012929	Vadose Zone Soil	MYRRPETKAAEEKVFKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTRYTPRFRPFDMLSIPNQSL
Ga0137407_104479922	3300012930	Vadose Zone Soil	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTHYTPRF
Ga0126375_101115441	3300012948	Tropical Forest Soil	MFKRTETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTHY
Ga0126375_113946891	3300012948	Tropical Forest Soil	MYRRPETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAGWAERRKAGLMGTAKSTHYTPRFRPFDM
Ga0163162_128465162	3300013306	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKPGLMGTAKSTH
Ga0157375_133270912	3300013308	Miscanthus Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTRYTPRFRPFDMLSIPNQS
Ga0182008_106643451	3300014497	Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKAGLMGTAKSTHYTPRFRPFDMLSTPNQ
Ga0137403_100852991	3300015264	Vadose Zone Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDM
Ga0132256_1019462301	3300015372	Arabidopsis Rhizosphere	MYRRPETKAAEEKVYRQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTR
Ga0132255_1032972183	3300015374	Arabidopsis Rhizosphere	MYRRPETKAAEEKVYRQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTRYTPRF
Ga0132255_1034662151	3300015374	Arabidopsis Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRAGLAGWAERQKPGLMGTAKSTHYTPRFRPFDMLSI
Ga0132255_1039036522	3300015374	Arabidopsis Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDMLSIPNQSLVILE
Ga0182040_110507952	3300016387	Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKA
Ga0184608_104218721	3300018028	Groundwater Sediment	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRF
Ga0184632_100991733	3300018075	Groundwater Sediment	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTHYTPRFRPFD
Ga0184609_102908542	3300018076	Groundwater Sediment	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFR
Ga0190265_103130473	3300018422	Soil	MFRRPETKATEEKVYKQQRIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTHYTP
Ga0193755_11713421	3300020004	Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDMLSVPNQ
Ga0193755_12284112	3300020004	Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFD
Ga0210378_100772922	3300021073	Groundwater Sediment	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLM
Ga0210380_102740052	3300021082	Groundwater Sediment	MYRRAETKATEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERGKAGLMGTAKSSH
Ga0224452_11063781	3300022534	Groundwater Sediment	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYT
Ga0179589_106385521	3300024288	Vadose Zone Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRY
Ga0209640_111016651	3300025324	Soil	MYRRPETKAAEERVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYMPRFRPFDMLSIPNQ
Ga0207680_102613802	3300025903	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKAGLMGTAK
Ga0207663_104042543	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MYRRPESKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERHKAGLMGTAKSTHYTPRF
Ga0207660_100094851	3300025917	Corn Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKAGLMGTAKSTHYTPRFRPFDMLSTANQSLVIL
Ga0207660_103027902	3300025917	Corn Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTYYTPR
Ga0207657_111356332	3300025919	Corn Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKPGLMGTAKSTHYTPRFRPFDMLSIPNQSL
Ga0207681_114115701	3300025923	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKPGLMGTAKSTHYTP
Ga0207670_105257233	3300025936	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAG
Ga0210116_10635732	3300025959	Natural And Restored Wetlands	MYRRLETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERSKAGLMGTAKSTHYTPRFRPFDML
Ga0207668_111641521	3300025972	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKVGLMGTAKSTHYT
Ga0207668_117569471	3300025972	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTH
Ga0207675_1027526492	3300026118	Switchgrass Rhizosphere	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDMLSIPNQSL
Ga0208454_11151732	3300027573	Soil	MFRRPETKATEEKVYKQERIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKST
Ga0209485_10080301	3300027691	Agricultural Soil	MYRRPETKAAEEKVYRQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDMLSIPN
Ga0302133_102555763	3300031646	Marine	MVTQEEIDRTYEKALSQEQIGEFMTTSKDHPRPGLAAWNTRAKIGLIGTAKSTYHRPIFR
Ga0307469_117705201	3300031720	Hardwood Forest Soil	MYRRPETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAAWVERRKAGLMGTAKSTYYTPRFR
Ga0310916_102826862	3300031942	Soil	MYRRPETKAAEEKVYKQKRIGEFMTTWKDFPRPGLAGWAERQKAGLMGTAKSTHYTPRFRPFDMLSIPNQ
Ga0310913_111404021	3300031945	Soil	MYRRPETKAAEEKVYKQKRIGEFMTTWKDFPRPGLAGWAERQKAG
Ga0307479_104136704	3300031962	Hardwood Forest Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTYYTPRFR
Ga0315912_109053303	3300032157	Soil	MYRRAETKAAEEKVYKQNQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTHYTP
Ga0315912_113433111	3300032157	Soil	MFRRPETKATEEKVYKQERIGEFMTTWKDFPRPGLAAWAER
Ga0310810_100927971	3300033412	Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAGWAERQKPGLMGTAKSTHYTPRFRPF
Ga0326726_106304202	3300033433	Peat Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWADRQKSGLMGTAKSTHYTPRFRPFDMLSIPNQS
Ga0310811_102158664	3300033475	Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERQKAGLMGTAKSTRYTPRFRPFDMLSIPNQS
Ga0316616_1023467411	3300033521	Soil	MYRRPETKAAEEKVYKQHQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTHYTPRFR
Ga0247830_100748333	3300033551	Soil	MFRRPETKATEEKVYKQERIGEFMTTWKDFPRPGLAAWAERKKAGLMGTAKSTHHT
Ga0364929_0150829_3_149	3300034149	Sediment	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGT
Ga0364934_0225032_1_168	3300034178	Sediment	MYRRSETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMGTAKSTHYT
Ga0373950_0121958_1_144	3300034818	Rhizosphere Soil	MYRRPETKAAEEKVYKQKQIGEFMTTWKDFPRPGLAAWAERRKAGLMG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103461

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign