NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103438

Metagenome / Metatranscriptome Family F103438

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103438
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 107 residues
Representative Sequence WIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Number of Associated Samples 96
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.00 %
% of genes near scaffold ends (potentially truncated) 98.02 %
% of genes from short scaffolds (< 2000 bps) 96.04 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (93.069 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(15.842 % of family members)
Environment Ontology (ENVO) Unclassified
(33.663 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.554 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.
1GPWNP_03170990
24ZMR_04264950
3Ga0062593_1007266732
4Ga0062589_1004877452
5Ga0062592_1021967261
6Ga0062591_1019948692
7Ga0062594_1006049122
8Ga0070683_1020154092
9Ga0070690_1005127751
10Ga0070666_114393102
11Ga0070682_1012273432
12Ga0068868_1007089741
13Ga0070669_1015346902
14Ga0070671_1017135431
15Ga0070694_1009917481
16Ga0070681_113007942
17Ga0070685_103945551
18Ga0070684_1003610352
19Ga0070672_1012526692
20Ga0070704_1007575392
21Ga0066670_109487312
22Ga0066903_1060931291
23Ga0068863_1019849121
24Ga0097621_1021995492
25Ga0074051_104567772
26Ga0075425_1021521371
27Ga0105240_106006571
28Ga0105245_114191151
29Ga0075423_125228991
30Ga0126305_108590581
31Ga0105239_133464381
32Ga0134127_103973931
33Ga0134122_112769112
34Ga0137429_11257322
35Ga0137321_11253491
36Ga0137362_113299031
37Ga0150985_1029706941
38Ga0137397_107322071
39Ga0157289_103295532
40Ga0157295_103652251
41Ga0137359_111455572
42Ga0137410_106336711
43Ga0126375_117415002
44Ga0126369_116250411
45Ga0164306_106703833
46Ga0164306_109644742
47Ga0163163_124512701
48Ga0157380_121619221
49Ga0173480_107078201
50Ga0180079_10439982
51Ga0132257_1002213321
52Ga0132255_1016021952
53Ga0132255_1043334102
54Ga0132255_1051580091
55Ga0182032_120531721
56Ga0190270_126025722
57Ga0190271_121472952
58Ga0210395_103129441
59Ga0210393_100379641
60Ga0210397_101843771
61Ga0210397_113158912
62Ga0247661_10459572
63Ga0247674_10252541
64Ga0247660_10355151
65Ga0207666_10221521
66Ga0207645_111080882
67Ga0207643_108318811
68Ga0207686_105578621
69Ga0207709_118238431
70Ga0207670_100425151
71Ga0207670_105248142
72Ga0207704_111505092
73Ga0207711_114020012
74Ga0207658_105015212
75Ga0207676_104879421
76Ga0207674_109269142
77Ga0209579_102607821
78Ga0307497_103623172
79Ga0265320_101716001
80Ga0307506_102052691
81Ga0310888_102245572
82Ga0318555_103510422
83Ga0310813_111125551
84Ga0307469_125099921
85Ga0306918_109855441
86Ga0307477_107062441
87Ga0318554_105168781
88Ga0318497_102985512
89Ga0318495_104902861
90Ga0318520_107487612
91Ga0308175_1031850322
92Ga0310912_110872161
93Ga0310909_105998991
94Ga0307479_102096081
95Ga0310902_101485732
96Ga0318559_102494721
97Ga0318513_102212871
98Ga0310889_102144801
99Ga0306920_1015732181
100Ga0310812_105179921
101Ga0364943_0259137_2_376
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.27%    β-sheet: 37.12%    Coil/Unstructured: 60.61%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100WIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
6.9%93.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Surface Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Soil
Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Sediment
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass, Maize And Mischanthus Litter
3.0%10.9%4.0%5.0%15.8%3.0%3.0%4.0%4.0%4.0%4.0%3.0%3.0%4.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPWNP_031709902067725001SoilLARAVDGEIVFWIEALRDESDDRLLVLREVRDLEIAVPPPESISYHDLIYVQRLSGRATIEIAGRVPERSAGSADVWRFRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR
4ZMR_042649502170459017Switchgrass, Maize And Mischanthus LitterAVLWVEPLRDDTDDRLLVLREIRDLEMSVPPPTAIAYHDLTYVQRLATRVNVTVMGQVPDRATGSVMLWRYRAAGDLFLQLEEGAGRVAMLAGESVHRGMIDILPGDTLPGR
Ga0062593_10072667323300004114SoilWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0062589_10048774523300004156SoilVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0062592_10219672613300004480SoilWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0062591_10199486923300004643SoilLRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEVAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0062594_10060491223300005093SoilDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070683_10201540923300005329Corn RhizosphereVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHELMYVQRLSGRASIEIAGRVPERASGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070690_10051277513300005330Switchgrass RhizosphereFWIEALRDEADDRLLVLHEIRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRIPERTAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070666_1143931023300005335Switchgrass RhizosphereGELVFWIEAVRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRMSGRASIEIAGRVPERSSGSADVWRYRAAGDLFLQIEEGGGRVLMLAGESVHRGMIDVLPGR*
Ga0070682_10122734323300005337Corn RhizosphereLARAVDGEIVFWIEALRDEADDRLLVLREIRDLEIAVPPPESINYHDLMYVQRLSGRATIEIAGRVPERSAGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0068868_10070897413300005338Miscanthus RhizosphereLRDEADDRLLVLREIRDLEIAVPPPESISYHDLTYVQRLSGRANIEIAGRVPERTAGSADVWRFRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGH*
Ga0070669_10153469023300005353Switchgrass RhizosphereDDRLLVLREIRDLEIAVPPPESISYHDLMYVQRMSGRAAIEIAGRVPERSSGNADVWRYRAAGDLYLQIEEGAGRVFMLAGESVHRGMSDVLPGR*
Ga0070671_10171354313300005355Switchgrass RhizosphereEGTATYHLGGKTFLLARAVDGETVFWIEALRDEADDRLLVLHEIRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRIPERTAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070694_10099174813300005444Corn, Switchgrass And Miscanthus RhizosphereKTFLLARAVDGDLVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070681_1130079423300005458Corn RhizosphereLARAVDGEIVFWIEAQRDEADDRLLVLHEIRDLEIAVPPPESINYHDLMYVQRLSGRATIEIAGRVPERAAGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070685_1039455513300005466Switchgrass RhizosphereDDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRIPERTAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070684_10036103523300005535Corn RhizosphereLLVLREIRDLEIAVPPPESINYHELMYVQRLSGRATIEIAGRVPERSAGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070672_10125266923300005543Miscanthus RhizosphereDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0070704_10075753923300005549Corn, Switchgrass And Miscanthus RhizosphereDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0066670_1094873123300005560SoilLLVLREIRDLEIAVPPPESISYHELMYVQRMSGRASIEIAGRVPERSSGNADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0066903_10609312913300005764Tropical Forest SoilLLVLREIRDLEIAVPPPESIAYHDLTYVQRLAGRATIELAGDVPERAPGSTDVWRYRAAGDLYLQIEEGAARVSMLAGESVHKAMIEVLPGR*
Ga0068863_10198491213300005841Switchgrass RhizosphereFWIEALRDESDDRLLVLREVRDLEIAVPPPESISYHDLMYVQRMSGRAAIEIAGRVPERSSGNADVWRYRAAGDLYLQIEEGAGRVFMLAGESVHRGMIDVLPGR*
Ga0097621_10219954923300006237Miscanthus RhizosphereYHLGGKTFVLARAVDGEIVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRVPERAAGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0074051_1045677723300006572SoilDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRVPERSTGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0075425_10215213713300006854Populus RhizosphereGDIVFWIEALRDEADDRLLVLREIRDLEIGVPPPESISYHDLMYVQRLSGRANIEIAGRVPERTAGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0105240_1060065713300009093Corn RhizosphereQLARAVDGDAVLWVEPPHGELAERLLVLREIRDLEMSVPPPAAIAYHDLTYVQRLATRVGLAIEGRVPERAGGGVMLWRYRAAGDLYLQLEEGAGPVTMLAGESVHPGMIEVLPGR*
Ga0105245_1141911513300009098Miscanthus RhizosphereDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0075423_1252289913300009162Populus RhizosphereDADDRLLVLREVRDLEIAVPPPDSISYHDLTYVHRPSGRAPVEIAGRVPERAAGSIDVWRYRAAGDVFLQVEARGATTVVLHGESVHKGMIDVLPGK*
Ga0126305_1085905813300010036Serpentine SoilEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRATIEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0105239_1334643813300010375Corn RhizosphereHGDVEGRLLVMREIRDLEMSVPPPSAIAYHELTYVQRLATRVTVSVEGRVPDRSGGSVMVWRYRAAGDLYLQLEEGAGRVAMLAGESVHQSMIEVLPGR*
Ga0134127_1039739313300010399Terrestrial SoilALRDDADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0134122_1127691123300010400Terrestrial SoilFLLARAVDGEIVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLTYVQRLSGRANIEIAGRVPERTAGSADVWRFRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGH*
Ga0137429_112573223300011437SoilTYHLGGKTSMLARAVDGELVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEVAGRVPERTAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGL*
Ga0137321_112534913300012175SoilTYHLGGKTFMLARAVDGELVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEVAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0137362_1132990313300012205Vadose Zone SoilHAETEDRLLVLREIRDLEMSVPPPSAIAYHDLTYVQRLATRVTVSLDGRVPERASGSVMLWRYRAAGDLYLQLEEGAGRVAMLAGESVHHGMIEVLPGR*
Ga0150985_10297069413300012212Avena Fatua RhizosphereVVARAVEGDTGFWIESPRDGEAPGDRLLVLREIRDLEIAVPPPESIAYHDLTYVQRLAGRAMVDVAGDVPDRSPGSTDVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0137397_1073220713300012685Vadose Zone SoilRLLVLREIRDLEMSVPPPSAIAYHDLTYVQRVATRATIALEGRVPERSSGSVMLWRYRAAGDLYLQLEEGSGRVSMLAGESVHHGMIEVLPGR*
Ga0157289_1032955323300012903SoilLLVLREVRDLEITVPPPDSISYHDLTYVQRLAGRATVEIAGRVPERAAGSIDVWRYRAAGDLFIQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0157295_1036522513300012906SoilRAVDGEMVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0137359_1114555723300012923Vadose Zone SoilVTSQLNGRTYPLARAVDGDAEIWIEPLRDDMDDRLLVLREVLDLEMSVPPPESINYHSLTYVQRLTGRATTQVMGVVPGRAPGSYQVWRYRAAGDLYIQIEEGGGRVFMLAGESVARGMIDILPGK*
Ga0137410_1063367113300012944Vadose Zone SoilQHWQLARAVDGDAVLWIEPLREEHDDRLLVLREIRDLEMSVPPPTAIAYHDLTYVQRLSTRVKVTVTGQVPDRTSGSVMLWRYRAAGDLYLQLEEGAARVSMLAGESVHKAMIEVLPGR*
Ga0126375_1174150023300012948Tropical Forest SoilEGTATYHLGGKTFLLARAVDGEIVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0126369_1162504113300012971Tropical Forest SoilAGGATWQLARAVDGDAVLWVEPQREDADERLLVLREIRDLEMSVPPPTAIAYHDLTYIQRLATRVKLTVTGQVPERTSGSVMFWRYRAAGDLYLQIEEGAARVSMLAGESVHKAMIEVLPGR*
Ga0164306_1067038333300012988SoilATYLINGRTTVLARAVDGEVVLWIESPHAPGGGDRLMVLREVRDLELAVPPPESISYHDLTYVQRLVGRAQVDVAGSIPERPAGAVELWRYRAAGDLFLQIEAGVDRVFMLSGESVHEGMIEILPGH*
Ga0164306_1096447423300012988SoilVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHELMYVQRLSGRASIEIAGRVPERVSGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0163163_1245127013300014325Switchgrass RhizosphereARAVDGEIVFWIEALRDESDDRLLVLREVRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRIPERTAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0157380_1216192213300014326Switchgrass RhizosphereLLVLREVRDLEITVPPPDSISYHDLTYVQRLSGRATVEIAGRVPERTAGSIDVWRYRAAGDLFIQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0173480_1070782013300015200SoilLLVLREVRDLEITVPPPDSISYHDLTYVQRLSGRATVEIAGRVPERTAGSVDVWRYRAAGDLFIQIEEGGGRVFMLAGESVHRGMIDVLPGR*
Ga0180079_104399823300015248SoilWIETLRDDADDRLLVLREVRDLEITVPPPDSISYHDLTYVQRLSGRATVEIAGRVPERAPGSIDVWRYRAAGDLFIQIEEGAGRVFMLAGESVHRGMIDVLPGR*
Ga0132257_10022133213300015373Arabidopsis RhizosphereADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGEPVHRGMIDVLPGR*
Ga0132255_10160219523300015374Arabidopsis RhizosphereVVEGTASYLINGRTTVLARAVDGEVVLWVESPHAPGGGDRVMVLREVRDLELAVPPPESISYHDLTYVQRLVGRAPVEIAGTVPERTGGPVELWRYRAAGDLYLQLEAGADRVFMLSGESVHQGMIEILPGR*
Ga0132255_10433341023300015374Arabidopsis RhizosphereDEADDRLLVLREIRDLEIAVPPPESISYHDLTYVQRLSGRANIEIAGRVPERTAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGH*
Ga0132255_10515800913300015374Arabidopsis RhizosphereHLGGKTFVLARAVDGEIVFWIEALRDEAADRLLVLREIRDLEIAVPPPESINYHDLMYVQRLSGRATIEVAGRVPERAAGSADVWRYRAAGDLFLQIEEGSGRVFMLAGESVHRGMIDVLPGR*
Ga0182032_1205317213300016357SoilEGVVTYHLAGKTWSLARAVDGDVVMWVEAPREESQDRQLVLHEIRDLEVTVPPPESIVYHKLSYVQRLAVRATVEIAGDVPERAAGTAEIWRYRGAGDLYVQIEDTGGRVLMLAGESVHRGMIDILPGR
Ga0190270_1260257223300018469SoilESPRADSVGDRLLVLREIRDLEIAVPPPESIAYHNLTYVQRLIGRASLEVAGEAPDRSPGAAEIWRYRAAGDLYLQIEEAGGRVFMLAGESVHRGMIDVLPGR
Ga0190271_1214729523300018481SoilLEITVPPPDSISYHDLTYVQRLSGRATVEIAGRVPERAPGSIDVWRYRAAGDLFIQIEEGAGRVFMLAGESVHRGMIDVLPGR
Ga0210395_1031294413300020582SoilIEPPRADASVERLLVLREIRDLEMSVPPPPAIAYHDLTYVQRLATRATIGVDGRVPERANGSVMVWRYRAAGDLYLQLEEGGGRVAMLAGESVHHGMIEVLPGH
Ga0210393_1003796413300021401SoilWQLARAVDGDVVLWIEPPHAELAERLLVLHEIRDLEMAVPPPSAIAYHDLTYVQRLATRVTIGVDGAVPERSSGSVMLWRYRAAGDLYLQLEEGGGRVAMLAGETVHQGMIEVLPGH
Ga0210397_1018437713300021403SoilSPNAGAGPPPAGLPSDRLLLLREIRDLDLTVPPPESIDYHRQSYVQRMSARVTLEIEGAVPEHVPGPLQLWRYRAAGDLFLQIEEGNGRVFMLAGESVPRGMVDHLPGR
Ga0210397_1131589123300021403SoilVLWIEPPHAETGERLLVLREIRDLEMSVPPPAAIAYHDLTYVQRLATRATIALEGRVPERSSGSVMLWRYRAAGDLYLQLEEGAGRVAMLAGESVHHGMIEVLPGR
Ga0247661_104595723300024254SoilKTFLLARAVDGELVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRASIEIAGRVPERTTGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0247674_102525413300024275SoilTFLLARAVDGELVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRASIEIAGRVPERTTGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0247660_103551513300024317SoilIVEGTVTYHLGGKTFLLARAVDGELVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRASIEIAGRVPERTTGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0207666_102215213300025271Corn, Switchgrass And Miscanthus RhizosphereLLARAVDGDLVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0207645_1110808823300025907Miscanthus RhizosphereARAVDGEMVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGSGRVFMLAGESVHRGMIDVLPGR
Ga0207643_1083188113300025908Miscanthus RhizosphereHLGGKTFMLARAVDGDMVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0207686_1055786213300025934Miscanthus RhizosphereTFVLARAVDGEIVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0207709_1182384313300025935Miscanthus RhizosphereIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0207670_1004251513300025936Switchgrass RhizosphereFMLARAVDGDMVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANVEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0207670_1052481423300025936Switchgrass RhizosphereALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRIPERTAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0207704_1115050923300025938Miscanthus RhizosphereWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRMSGRAAIEIAGRVPERSSGNADVWRYRAAGDLYLQIEEGAGRVFMLAGESVHRGMIDVLPGR
Ga0207711_1140200123300025941Switchgrass RhizosphereDMVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLTYVQRLSGRANIEIAGRVPERTAGSADVWRFRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGH
Ga0207658_1050152123300025986Switchgrass RhizosphereRDEADDRLLVLREIRDLEIAVPPPESISYHDLTYVQRLSGRANIEIAGRVPERTAGSADVWRFRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGH
Ga0207676_1048794213300026095Switchgrass RhizosphereRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRIPERTAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0207674_1092691423300026116Corn RhizosphereDGEIVFWIEALRDDADDRLLVLREVRDLEIAVPPPESISYHDLMYVQRMSGRAAIEIAGRVPERSSGNADVWRYRAAGDLYLQIEEGAGRVFMLAGESVHRGMIDVLPGR
Ga0209579_1026078213300027869Surface SoilVGYETGGESWQLARAVDGDAVLWIEPPRADASVERLLVLREIRDLEMSVPPPPAIAYHDLTYVQRLATRATIGVDGRVPERANGSVMVWRYRAAGDLYLQLEEGGGRVAMLAGESVHHGMIEVLPGH
Ga0307497_1036231723300031226SoilDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0265320_1017160013300031240RhizosphereVSYDSGGDSWQLARAVDGGTVLWVEPPHADTEDRLLVLREIRDLEMSVPPPSAIAYHDLTYVQRLATRVTLSVEGRVPERAAGSVMVWRYRAAGDLYLQLEEGAGRVSMLAGESVHRGLIEVLPGK
Ga0307506_1020526913300031366SoilVFWIEAVRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRMSGRATIEIAGRVPERATGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0310888_1022455723300031538SoilIVEGTATYHLGGKTFVLARAVDGEIVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0318555_1035104223300031640SoilRLIVLREIRDLEMSVPPPSAIAYHDLTYVQRLATRVNLTVEGRVPERAAGSVMLWRYRAAGDLYLQLEEGGARVAMLAGESVHRGLIEVLPGR
Ga0310813_1111255513300031716SoilALRDEADDRLLVLREIRDLEIAVPPPESISYHELMYVQRLSGRASIEIAGRVPERASGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGK
Ga0307469_1250999213300031720Hardwood Forest SoilLARAVDGEIVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRASIEIAGRVPERSAGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0306918_1098554413300031744SoilDRLLVLREIRDLEIAVPPPESIAYHDLTYVQRLAGRATVDVSGEVPERAAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDILPGR
Ga0307477_1070624413300031753Hardwood Forest SoilRAVDGEAVLWIEPPHAETGERLLVLREIRDLEMSVPPPSAIAYHDLTYVQRVATRATIALEGRVPERSSGSVMLWRYRAAGDLYLQLEEGAGRVAMLAGESVHHGMVEVLPGR
Ga0318554_1051687813300031765SoilRAVDGATVLWVEPPHLDTEGRLLVLREIRDLEMSVPPPSAIAYHDLTYVQRLATRVSVSVEGRVPERTAGSVMLWRYRAAGDLYLQLEEGGGRVAMLAGESVHRGLIEVLPGR
Ga0318497_1029855123300031805SoilRAVDGDVVFWIESPRDDAGDAVGAIGDRLLVLREIRDLEIAVPPPESIAYHDLTYVQRLAGRATVDVSGEVPERAAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDILPGR
Ga0318495_1049028613300031860SoilEPPHVDTEERLLVLREIRDLEMSVPPPSAIAYHDLTYVQRLAGRATVDISGDVPERSAGSADVWRYRAAGDLYLQIEEGSGRVFMLAGESVHRGMIDILPGR
Ga0318520_1074876123300031897SoilPHVETEDRLLVLREIRDLEMSVPPPSAIAYHDLTYVQRLATRVTVGVDGRVPERTAGSAMVWRYRAAGDLYLQLEEGAGRVVMLAGESVHRGLIEVLPGR
Ga0308175_10318503223300031938SoilADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRMSGRAAIEIAGRVPERSSGNADVWRYRAAGDLYLQIEEGAGRVFMLAGESVHRGMIDVLPGR
Ga0310912_1108721613300031941SoilESQDRQLVLHEIRDREVTVPPPESIVYHKLSYVQRLAVRATVEIAGDVPERAAGTAEIWRYRGAGDLYVQIEDTGGRVLMLAGESVHRGMIDILPGR
Ga0310909_1059989913300031947SoilDAGDAVGAIGDRLLVLREIRDLEIAVPPPESIAYHDLTYVQRLAGRATVDVSGEVPERAAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDILPGR
Ga0307479_1020960813300031962Hardwood Forest SoilRLLVLREIRDLEMSVPPPSAIAYHDLTYVQRVATRATIALEGRVPERSSGSVMLWRYRAAGDLYLQLEEGAGRVAMLAGESVHHGMIEVLPGR
Ga0310902_1014857323300032012SoilIRDLEIAVPPPESISYHDLIYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0318559_1024947213300032039SoilGVFWIESPRDDAGDAVGAIGDRLLVLREIRDLEIAVPPPESIAYHDLTYVQRLAGRATVDVSGEVPERAAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDILPGR
Ga0318513_1022128713300032065SoilLEIAVPPPESIAYHDLTYVQRLAGRATVDVSGEVPERAAGSADVWRYRAAGDLYLQIEEGGGRVFMLAGESVHRGMIDILPGR
Ga0310889_1021448013300032179SoilALRDEADDRLLVLREIRDLEIAVPPPESISYHDLMYVQRLSGRATIEIAGRVPERSAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0306920_10157321813300032261SoilVEAPREESQDRQLVLHEIRDLEVTVPPPESIVYHKLSYVQRLAVRATVEIAGDVPERAAGTAEIWRYRGAGDLYVQIEDTGGRVLMLAGESVHRGMIDILPGR
Ga0310812_1051799213300032421SoilLEIGVPPPESISYHYLMYVQRLSGRANIEIAGRVPERTAGSADVWRYRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR
Ga0364943_0259137_2_3763300034354SedimentYHLGGKIFMLARAVDGDIVFWIEALRDEADDRLLVLREIRDLEIAVPPPESISYHDLTYVQRLSGRANIEIAGRVPERAAGSADVWRFRAAGDLFLQIEEGGGRVFMLAGESVHRGMIDVLPGR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.