Metagenome / Metatranscriptome Family F103437

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103437
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	88 residues
Representative Sequence	MSKLRIAVLTAVIALPLGAFAKDAMLKGHPNLEKARASLNEADKYITASQKANEKVWGDEGGHGKKAKEAIATAKAELDLAAEWVNSHGK
Number of Associated Samples	87
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.35 %
% of genes near scaffold ends (potentially truncated)	31.68 %
% of genes from short scaffolds (< 2000 bps)	83.17 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.050 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (8.911 % of family members)
Environment Ontology (ENVO)	Unclassified (33.663 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.535 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 64.41% β-sheet: 0.00% Coil/Unstructured: 35.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF08874	DUF1835	14.85
PF02954	HTH_8	5.94
PF02738	MoCoBD_1	3.96
PF06210	DUF1003	2.97
PF00990	GGDEF	2.97
PF00069	Pkinase	2.97
PF02789	Peptidase_M17_N	0.99
PF13638	PIN_4	0.99
PF02913	FAD-oxidase_C	0.99
PF02518	HATPase_c	0.99
PF01578	Cytochrom_C_asm	0.99
PF00067	p450	0.99
PF08308	PEGA	0.99
PF02965	Met_synt_B12	0.99
PF13376	OmdA	0.99
PF04357	TamB	0.99
PF00730	HhH-GPD	0.99
PF00294	PfkB	0.99
PF00072	Response_reg	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.88
COG4420	Uncharacterized membrane protein	Function unknown [S]	2.97
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.99
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.99
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	0.99
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.99
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.99
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.99
COG1410	Methionine synthase I, cobalamin-binding domain	Amino acid transport and metabolism [E]	0.99
COG2124	Cytochrome P450	Defense mechanisms [V]	0.99
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.99
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.99

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.05 %
Unclassified	root	N/A	4.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.05 %
Unclassified	root	N/A	4.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.05 %
Unclassified	root	N/A	4.95 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.17 %
Unclassified	root	N/A	4.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	81.19 %
Unclassified	root	N/A	4.95 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	81.19 %
Unclassified	root	N/A	4.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	67.33 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7.92 %
Unclassified	root	N/A	4.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	67.33 %
Unclassified	root	N/A	4.95 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	67.33 %
Unclassified	root	N/A	4.95 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	67.33 %
Unclassified	root	N/A	4.95 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	67.33 %
Unclassified	root	N/A	4.95 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105449768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1135	Open in IMG/M
3300003541\|JGI20214J51650_11050780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300004102\|Ga0058888_1148712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300004119\|Ga0058887_1076609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300004120\|Ga0058901_1128595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
3300004785\|Ga0058858_1355229	Not Available	511	Open in IMG/M
3300004798\|Ga0058859_10033624	Not Available	504	Open in IMG/M
3300004798\|Ga0058859_10044938	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300004801\|Ga0058860_12190743	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300005258\|Ga0074071_1020478	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300005327\|Ga0070658_10301142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1367	Open in IMG/M
3300005329\|Ga0070683_101471972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300005330\|Ga0070690_100039592	All Organisms → cellular organisms → Bacteria	2977	Open in IMG/M
3300005336\|Ga0070680_101300238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300005347\|Ga0070668_102007021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	533	Open in IMG/M
3300005356\|Ga0070674_100305121	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300005365\|Ga0070688_101000931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300005456\|Ga0070678_100011649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5434	Open in IMG/M
3300005458\|Ga0070681_10855700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	827	Open in IMG/M
3300005459\|Ga0068867_102234014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300005548\|Ga0070665_101588415	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005563\|Ga0068855_100808066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	996	Open in IMG/M
3300005577\|Ga0068857_101693120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300005764\|Ga0066903_100371779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2329	Open in IMG/M
3300005764\|Ga0066903_101525358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1263	Open in IMG/M
3300005764\|Ga0066903_103051410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	907	Open in IMG/M
3300005842\|Ga0068858_101638158	Not Available	635	Open in IMG/M
3300006237\|Ga0097621_102371852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300009137\|Ga0066709_102018719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300009792\|Ga0126374_10116766	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300009792\|Ga0126374_11433803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300010046\|Ga0126384_12024468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300010047\|Ga0126382_10027582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3066	Open in IMG/M
3300010047\|Ga0126382_12506569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300010337\|Ga0134062_10023941	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300010360\|Ga0126372_11117712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	807	Open in IMG/M
3300010366\|Ga0126379_12975996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300010397\|Ga0134124_11322762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	744	Open in IMG/M
3300010398\|Ga0126383_12029689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300010399\|Ga0134127_13436930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300010403\|Ga0134123_12059576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300010867\|Ga0126347_1231729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300011120\|Ga0150983_10106031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300011120\|Ga0150983_12476442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300011120\|Ga0150983_15999021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300011120\|Ga0150983_16183330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300012212\|Ga0150985_102769399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300012212\|Ga0150985_105590197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300012212\|Ga0150985_111560184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300012212\|Ga0150985_122624508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	551	Open in IMG/M
3300012469\|Ga0150984_116565216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300012924\|Ga0137413_10844456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	707	Open in IMG/M
3300012929\|Ga0137404_11428186	Not Available	639	Open in IMG/M
3300012929\|Ga0137404_11494254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300012944\|Ga0137410_10320846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300012971\|Ga0126369_12895774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300014968\|Ga0157379_11517068	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	652	Open in IMG/M
3300015068\|Ga0167645_100433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	6522	Open in IMG/M
3300015245\|Ga0137409_10096339	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2749	Open in IMG/M
3300017974\|Ga0187777_10687080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300020021\|Ga0193726_1019649	All Organisms → cellular organisms → Bacteria	3453	Open in IMG/M
3300020021\|Ga0193726_1043644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2165	Open in IMG/M
3300021362\|Ga0213882_10163688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	914	Open in IMG/M
3300021405\|Ga0210387_10506826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1073	Open in IMG/M
3300021445\|Ga0182009_10686813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300022499\|Ga0242641_1050962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300022522\|Ga0242659_1116071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300022530\|Ga0242658_1201335	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300022721\|Ga0242666_1193298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300022722\|Ga0242657_1183853	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300024288\|Ga0179589_10084942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1267	Open in IMG/M
3300025906\|Ga0207699_11393859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300025909\|Ga0207705_10018226	All Organisms → cellular organisms → Bacteria	5020	Open in IMG/M
3300025912\|Ga0207707_10390317	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300025917\|Ga0207660_11045467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300025934\|Ga0207686_11348630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300025936\|Ga0207670_10403532	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300025937\|Ga0207669_10053258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2436	Open in IMG/M
3300025944\|Ga0207661_10706943	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	927	Open in IMG/M
3300025961\|Ga0207712_10135437	All Organisms → cellular organisms → Bacteria → Proteobacteria	1883	Open in IMG/M
3300026088\|Ga0207641_10082731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2790	Open in IMG/M
3300026088\|Ga0207641_12083677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300026089\|Ga0207648_11506503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300026116\|Ga0207674_10965278	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300026121\|Ga0207683_10017556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6100	Open in IMG/M
3300027176\|Ga0208992_1064254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300028379\|Ga0268266_12156430	Not Available	530	Open in IMG/M
3300030521\|Ga0307511_10384358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300031234\|Ga0302325_12183660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300031238\|Ga0265332_10005697	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5723	Open in IMG/M
3300031715\|Ga0307476_10003031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9982	Open in IMG/M
3300031720\|Ga0307469_12356251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300031938\|Ga0308175_100000088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	72450	Open in IMG/M
3300032044\|Ga0318558_10684959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300032174\|Ga0307470_10387080	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	984	Open in IMG/M
3300032180\|Ga0307471_100959770	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300032205\|Ga0307472_101388609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	681	Open in IMG/M
3300032515\|Ga0348332_10040194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300032783\|Ga0335079_10890979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	915	Open in IMG/M
3300032892\|Ga0335081_10019315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11020	Open in IMG/M
3300032955\|Ga0335076_11359565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.32%
Host-Associated	Host-Associated	31.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.33%
Plants	Host-Associated → Plants	27.72%
Human	Host-Associated → Human	3.96%
Aquatic	Environmental → Aquatic	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.88%
Digestive System	Host-Associated → Human → Digestive System	3.96%
Roots	Host-Associated → Plants → Roots	1.98%
Marine	Environmental → Aquatic → Marine	0.99%
Peat	Environmental → Terrestrial → Peat	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.99%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.60%
Loam	Environmental → Terrestrial → Soil → Loam	20.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.96%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.97%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.98%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.98%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.95%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	3.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.99%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.99%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005258	Microbial communities on the surface of bentonite enhanced biochar	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015068	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8C, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054497681	3300000364	Soil	MSRLRTIVLTAVIAFPLGAVAKDALKGHPNLEKARASLNDAEKWISKSQEANEGVWKDEGGHGQKAKELIGQAKEQLNKAAEWVNTHK*
JGI20214J51650_110507801	3300003541	Wetland	MKKLATIAITAAICIPLGAFAKDALKGHPNLEKARASLNDADKWITASQAANEWGGDEGGHGKKAKEAISLAKDELKQAADFLSKK*
Ga0058888_11487121	3300004102	Forest Soil	KLSALALAAAVLLPLGAFAGDPVLKGHPNLQKARHSINQAYEDIKKSQEANEKVWGDEGGHGQKAKAALETAKSEIDLAAEWVNSHGK*
Ga0058887_10766092	3300004119	Forest Soil	MKKLSALALAAAVLLPLGAFAGDPVLKGHPNLQKARHSINQAYEDIKKSQEANEKVWGDEGGHGQKAKAALETAKSEIDLAAEWVNSHGK*
Ga0058901_11285952	3300004120	Forest Soil	PMKKLSALALAAAVLLPLGAFAGDPVLKGHPNLQKARHSINQAYEDIKKSQEANEKVWGDEGGHGQKAKAALETAKSEIDLAAEWVNSHGK*
Ga0058858_13552291	3300004785	Host-Associated	RLRTIVLTAVIAFPLGAVAKDALRGHPNLEKARASLNDADKWIGKSQEANEGIWKDEGGHGQKAKEHIAQAKEELNKAAEWVNTHK*
Ga0058859_100336242	3300004798	Host-Associated	MSRLRTIVLTAVIAFPLGAVAKDALRGHPNLEKARASLNDADKWIGKSQEANEGVWKDEGGHGQKAKEHIAQAKEELNRAAEWVNTHK*
Ga0058859_100449381	3300004798	Host-Associated	MSRLRTIVLTAVIAFPLGAVAKDALRGHPNLEKARASLNDADKWIGKSQEANEGIWKDEGGHGQKAKEHIAQAKEELNKAAEWVNTHK*
Ga0058860_121907432	3300004801	Host-Associated	MSKLRIAVLTAVIALPLGAFAKDAMLKGHPNLEKARASLNEADKYITASQKANEKVWGDEGGHGKKAKEAIATAKAELDLAAEWVNSHGK*
Ga0074071_10204782	3300005258	Soil	MKTLASIALTAAVCLPVGAFAKDVILRGHPNLQKARTALNEADRFIARSQEANEAVWTDEGGHGRAAKEYITKAKQELDLAAEWVNSRK*
Ga0070658_103011423	3300005327	Corn Rhizosphere	TCADVVRASQRRRAMTKLKTAILTAAIALPLGAFAKDAVLKGHPNLEKARASLNEADMYISKSQAANEGVWKAEGGHGAKAKEAIAEAKKQLDLAAEWVNTHH*
Ga0070683_1014719721	3300005329	Corn Rhizosphere	MSKLRIAVITAAIALPLGAFAKDAMLKGHPNLEKARASLNDAERHITASQKANEGVWKEEGGHGRKAKEAIETAKQELDLAAEWVNKH*
Ga0070690_1000395921	3300005330	Switchgrass Rhizosphere	MSRLRTIVLTAVIAFPLGAVAKDALKGHPNLEKARASLNDADKWISKSQEANEGVWKDEGGHGQKAKEHIAQAKEELNKAAEWVNTHK*
Ga0070680_1013002381	3300005336	Corn Rhizosphere	MSKFTTIVLTAAVCLPLGAFAKDAMLKGHPNLQKARTSLNDAQRYIEASQKANEKVWADEGGHGQKAKEAIEKAKSELDAAAEWVNGHVK*
Ga0070668_1020070212	3300005347	Switchgrass Rhizosphere	MSRLRTIVLTAVIAFPLGAVAKDALKGHPNLEKARASLNDADKWISKSQEANEGVWKDEGGHGQKAKEHIAQAKEELNKAAEW
Ga0070674_1003051212	3300005356	Miscanthus Rhizosphere	MSKLKTILITAAVAFPIGILAAGPLKGHPNLEKARAALNDADKYITKSQAANEGVWKDEGGHAKRAKELIAQAKEELEKGAEWVNHH*
Ga0070688_1010009312	3300005365	Switchgrass Rhizosphere	MSKLRIAVLTAAIALPLRAFAKDAMLKGHPNLEKARASLNEAERYITASQKANERVWGDEGGHGKKAKEAIETAKQELDLAAGWVNSHPR*
Ga0070678_1000116495	3300005456	Miscanthus Rhizosphere	MSKLKTILITAAVAFPIGILAAGPLKGHPNLEKARAALNDADKYITKSQAANEGVWKDEGGHAKKAKELIQQAKEELEKGAEWVNHH*
Ga0070681_108557002	3300005458	Corn Rhizosphere	MSKLRTVILTAAIALPMGAFAKDVILKGHPNLEKARASLNDADKWITASQKANEGVWGDEGGHGQRAKEAIGTAKHELDLAAEWVNSHHK*
Ga0068867_1022340141	3300005459	Miscanthus Rhizosphere	MSKLRIAVLTAVIALPLGAFAKDAMLKGHPNLEKARASLNEADKYITASQKANEKVWGDEGGHGKKAKEAIATAKAELDLAAEWVNSHQK*
Ga0070665_1015884152	3300005548	Switchgrass Rhizosphere	MSKMKTIALTALLAFSGGVLVAGPLKGHPNLEKARAALNDADKYITKSQEANEGVWKDEGGHARKAKELIGQAKEELEKGAEWVNHH*
Ga0068855_1008080662	3300005563	Corn Rhizosphere	MRAGLRYEPRMSKFTTIVLTAAVCLPLGAFAKDAMLKGHPNLQKARTSLNDAQKYIEASQKANEKVWTDEGGHGQKAKEAIETAKSELDKAAEWVNSHSK*
Ga0068857_1016931201	3300005577	Corn Rhizosphere	MTKLRAIVISAAIALPVAALAKDVFLKGHPNLEKARMSLNEADKHITESQKANEKVWADEGGHGKRAKEAIETAKKELDLAAEWVNSHQK*
Ga0066903_1003717792	3300005764	Tropical Forest Soil	MSKLRTVILTAVIALPMGAFAKDVILKGHPNLEKARASLNDADKWITASQKANEGVWGDEGGHGQRAKEAIATAKHEIDLAAEWVNSHQK*
Ga0066903_1015253582	3300005764	Tropical Forest Soil	MTKLRAIVISAAIALPVAALAKDVFLKGHPNLEKARTSLIEADKYIVDSQKANEKVWGDEGGHGKRAKEAIETAKKELDLAAEWVNSHQK*
Ga0066903_1030514102	3300005764	Tropical Forest Soil	MSKLRTIALTAAICLPIGAFAGDVMLKGHPHLQAAHKALNTAMTEITASQKANEKVWGDEGGHGKAAKEAIEKAKTELDLAAEWVNSHNK*
Ga0068858_1016381581	3300005842	Switchgrass Rhizosphere	AVIAFPLGAVAKDALKGHPNLERARANLNDAERWITKSQEANEGVWKDEGGHGQKAKEHIAQAKEELNKAAEWVNTHK*
Ga0097621_1023718521	3300006237	Miscanthus Rhizosphere	MTKLRAIVISAAIALPVAALAKDVFLKGHPNLEKARMSLNEADKHITASQQANEKVWGDEGGHGKRAKEAIETAKKELDLAAEWVNSHQK*
Ga0066709_1020187192	3300009137	Grasslands Soil	MSKLRTIAITAALCIPLGAFAKDALKGHPNLEKARASLSEAQKYITKSQTANEGVWKDEGGHAKKAKELIQQAKEELDKGAEWVNTHH*
Ga0126374_101167662	3300009792	Tropical Forest Soil	MSKLRIAVITAAIALPLGAFAKDVVLKGHPNLEKARAALNEADKYITASQKANEHVWGDEGGHGKKAKEAIATAKQELDLAAEWVNSHAK*
Ga0126374_114338032	3300009792	Tropical Forest Soil	LPLGAFAKDAMLKGHPNLEKARASLNDADKWITASQKANEAVWGDEGSHGKRAKEAIATAKSELDLAAEWVNSHHK*
Ga0126384_120244681	3300010046	Tropical Forest Soil	MKLRNAIIACAVAIPLAAFAKDPFLKGHPNMQKARMALIDAEKYITDSQKANEKVWGDEGGHGKRAKEAIETAKKEMDLAAEWVNSHEK*
Ga0126382_100275823	3300010047	Tropical Forest Soil	MSKLRTAILTAVIALPMGAFAKDAILKGHPNLEKARASLNDADKWITASQKANEGVWGDEGGHGKRAKEAIATAKHEIDLAAEWVNSRHK*
Ga0126382_125065691	3300010047	Tropical Forest Soil	MSKLRTVVLTAVIALPLGAFAKDVVLKGHPNLEKARAALNDADKYITASQKANEKVWGDEGGHGKKAKEAIASAKAELDLAAEWVNSHGK*
Ga0134062_100239412	3300010337	Grasslands Soil	MSRLRTVLITAAIALPLGAFAKDAMLKGHPNLQKARAALNEADRFITASQKANEHVWGDEGGHGKRAKEAIATAKQELDLAAEWVNSHEK*
Ga0126372_111177122	3300010360	Tropical Forest Soil	LPLGAFAKDVVLKGHPNLEKARAALNEADKYIAASQKANEHVWGDEGGHGKKAKEAIATAKQELDLAAEWVNSHVK*
Ga0126379_129759961	3300010366	Tropical Forest Soil	KLRTIALTAAICLPIGAFAGDVMLKGHPHLQAAHKALNTAMTEITASQKANEKVWGDEGGHGKSAKEAIEKAKTELDLAAEWVNSHNK*
Ga0134124_113227622	3300010397	Terrestrial Soil	MSKLRIAVLTAVIALQLGAFAKDAMLKGHPNLEKARASLNDAERFITASQKANERVWGDEGGHGKKAKEAIQTAKQELDLAAEWVNSHK*
Ga0126383_120296891	3300010398	Tropical Forest Soil	MSKLRTVILTAAIALPLGAFAKDVVLKGHPNLQKARASLNEADKYITASQKANEHVWGDEGGHGKRAKEAIDTAKKELDLAAEWVNSHEK*
Ga0134127_134369302	3300010399	Terrestrial Soil	MSKFTTIVLTAAVCLPLGAFAKDAMLKGHPNLQKARTSLNDAQKYIEASQKANEKVWTDEGGHGQKAKEAIETAKSELDKAAEWVNSHSK*
Ga0134123_120595762	3300010403	Terrestrial Soil	MSRLRLAVLTAAIALPLGAFAKDAMLKGHPNLEKARTSLNDAERFITASQKANERVWGDEGGHGKKAKEAIQTAKQELDLAAEWVNSHK*
Ga0126347_12317291	3300010867	Boreal Forest Soil	GGEHMYKLRTVIIAAAIALPIGAFAKDAVLRGHPNLEKARASLNDADRWITKSQEANEHVWGDEGGHGKRAKESIQSAKRELDLAAEWVNSHEK*
Ga0150983_101060311	3300011120	Forest Soil	SKLTAIGLTAAICIPLGAFAGDPILKGHPNLQKARHSLGEAYESIKKSQTANEKVWGDEGGHGQRAKEAIEKAASELDLAAEWVNSHVQK*
Ga0150983_124764422	3300011120	Forest Soil	FIITRGDPMKKLSALALAAAVLLPLGAFAGDPVLKGHPNLQKARHSINQAYEDIKKSQEANEKVWGDEGGHGQKAKSALETAKSEIDLAAEWVNSHGK*
Ga0150983_159990211	3300011120	Forest Soil	PMSKLTAIALAAAVLLPIGAFAGDPVLKGHPNLQKARHSINEAYDFIKKSQEANEKVWGDEGGHGQKAKAALETAKSEVDLAAEWVNSHVQK*
Ga0150983_161833301	3300011120	Forest Soil	TGDLMSKLSTIAITAAICIPLGVTIAGPLRGHPNLEKARNALNDADSWITKSQQANEAIWKDEGGHGEKAKEAIHAAKEQLDAAAEWVNNHK*
Ga0150985_1027693992	3300012212	Avena Fatua Rhizosphere	MSRLRIAIITAAIALPLGAFAKDAMLKGHPNLEKARASLNDAERYITASQKANEGVWKEEGGHGKKAKEAIETAKQELDLAAEWVNKH*
Ga0150985_1055901971	3300012212	Avena Fatua Rhizosphere	GDHMSKLRIAIITAAVALPLGAFAGGALRGHPNLEKARASLTEAERYITASQKANEGVWKEEGGHGQKAKEAIETAKQEIELAAEWVNKHGK*
Ga0150985_1115601841	3300012212	Avena Fatua Rhizosphere	GDDMSKLRIAVITAAIALPLGAFAKDAMLKGHPNLEKARASLNEAERYISASQKANERVWGDEGGHGKRAKEAIETAKQELDLAAEWVNAHPK*
Ga0150985_1226245082	3300012212	Avena Fatua Rhizosphere	PIGAFAGGALRGHPNLEKARASLNEAERYITASQKANEGVWKEEGGHGHKAMEAIETAKQEIELAAEWVNKHGK*
Ga0150984_1165652161	3300012469	Avena Fatua Rhizosphere	MSKLRIAVITAAIALPLGAFAKDAMLKGHPNLEKARASLNEAERYISASQKANERVWGDEGGHGKRAKEAIETAKQELDLAAEWVNAHPK*
Ga0137413_108444562	3300012924	Vadose Zone Soil	MTKFRTVLITAIIALPLGAVAGGALRGHPNLERARNALNDADRYIEASQHANEGVWKEEGGHGQRAKELIGQAKEQLNQAAEWVNHH*
Ga0137404_114281862	3300012929	Vadose Zone Soil	MSRLRTIVLTAVIAFPLGAVAKDALKGHPNLEKARASLNDADKFITKSQEANEGVWKDEGGHGQKAKELIGQAKEQLNLAAEWVNTHK*
Ga0137404_114942542	3300012929	Vadose Zone Soil	PMSKLRAIVITAAIALPLGALAKDAALRGHPNLEKARAALNDADRWITASQKANEGVWSDEGSHGKRAKEAIATAKQELDLAAEWVNSHHK*
Ga0137410_103208462	3300012944	Vadose Zone Soil	MSKLRIAIITAAIALPLGALAKDVALKGHPNLEKARAALNDAERHITASQKANERVWGDEGGHGKKAKEAIATAKQELD
Ga0126369_128957741	3300012971	Tropical Forest Soil	MSKLRIAVLTAIVALPLGALAKDAMLKGHPNLEKARAALNEADKYITASQKANEHVWGDEGGHGKKAKEAITTAKQELDLAAEWVNSHAK*
Ga0157379_115170682	3300014968	Switchgrass Rhizosphere	MSKTLRTVLITAVIALPLGALAKDVILKGHPNLEKARAALNDADKWISKSQEANEHVWGDEGGHGKKAKEAIGAAKHELDLAAEWVNSHPK*
Ga0167645_1004335	3300015068	Glacier Forefield Soil	MSKFRTIALTALVCLPIGVVIAGPMKGHPNLEKARAALNEADSFISKSQSANEHVWKDEGGHGQRAKEAISTAKHELELAAEWVNSHEK*
Ga0137409_100963392	3300015245	Vadose Zone Soil	MSKLRIAIITAAIALPLGALAKDVALKGHPNLEKARAALNDAERHITASQKANERVWGDEGGHGKKAKEAIETAKQELDLAAGWVNSHPK*
Ga0187777_106870801	3300017974	Tropical Peatland	MKTLATIALTAAVCLPIGAFAKDVVLRGHPNLQKARAALNEADRFIAKSQEANEAVWGDEGGHGRAAKEYIGKAKQEL
Ga0193726_10196493	3300020021	Soil	MSKLTTLVLTAAICLPLGAFAKDAMLKGHPNLQKAHAALNDADRYITESQKANEAIWKDEGNHGQKAKEAIAAAKTQLDLAAEWVNNHK
Ga0193726_10436443	3300020021	Soil	MSKFRTIALTALVCLPIGVVIAGPMKGHPNLEKARAALNEADSFISKSQSANEHVWKDEGGHGQRAKEAIATAKHELELAAEWVNSHEK
Ga0213882_101636881	3300021362	Exposed Rock	MKKLATIAITAAICLPLGAFAKDALKGHPNLEKARAALNEADKYITASQAANEWGGDEGGHGKKAKEAISLAKDELKAAADFLNKK
Ga0210387_105068262	3300021405	Soil	MSKFSTIALTAVVCLPLGAFAKDVMLKGHPNLQKARTSLADADKWISASQKANEGVWGDEGGHGQKAKAAIATAKSELDLAAEWVNSHAK
Ga0182009_106868131	3300021445	Soil	MSKLRIAIITAAVALPLGALAAGALKGHPNLEKARASLNDAERFITASQKSNEGVWKEEGGHGQKAKEAIETAKQ
Ga0242641_10509622	3300022499	Soil	LRTVIITCAIALPVGAFAKDAILRGHPNLEKARASLNDADRWITKSQESNEHVWGDEGGHGKRAKEAIQSAKRELDLAAEWVNSHEK
Ga0242659_11160712	3300022522	Soil	LPLGAFAGDPMLKGHPNLQKARAACNDANSWISKSQEANEKVWGDEGGHGKRAKEALATAKSELDLAAEWVNSHGK
Ga0242658_12013351	3300022530	Soil	MHKLRTVIITCAIALPVGAFAKDAILRGHPNLEKARASLNDADRWITKSQESNEHVWGDEGGHGKRAKEAIQSAKRELDLAAEWVNSHEK
Ga0242666_11932981	3300022721	Soil	MSKLKVIAYTAVVTAALALPIGAYAGDVMLKGHPHLQRAHHALHEAKEAITASQKANEKVWGDEGGHGKEAKQKIEEAVVQIDLAAEWVNSHAK
Ga0242657_11838531	3300022722	Soil	PMKKLSALALAAAVLLPLGAFAGDPVLKGHPNLQKARHSINQAYEDIKKSQEANEKVWGDEGGHGQKAKAALETAKSEIDLAAEWVNSHGK
Ga0179589_100849422	3300024288	Vadose Zone Soil	MSKLRIAIITAVIALPLGAFAGGALRGHPTLEKARASLYDAERYINAAQKANEGVWKEEGGHGQKAKEAIEEAKRQVEFAAEWVNKH
Ga0207699_113938591	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSKLRLAIITAAIALPLGALAKDVVLKGHPNLEKARASLNEADKYITASQKANEHVWADEGGHGKKAKEAIATAKAELDLAAEWVNSHAK
Ga0207705_100182261	3300025909	Corn Rhizosphere	EPTCADVVRASQRRRAMTKLKTAILTAAIALPLGAFAKDAVLKGHPNLEKARASLNEADMYISKSQAANEGVWKAEGGHGAKAKEAIAEAKKQLDLAAEWVNTHH
Ga0207707_103903172	3300025912	Corn Rhizosphere	MSKLRTVILTAAIALPMGAFAKDVILKGHPNLEKARASLNDADKWITASQKANEGVWGDEGGHGQRAKEAIGTAKHELDLAAEWVNSHHK
Ga0207660_110454672	3300025917	Corn Rhizosphere	MSKFTTIVLTAAVCLPLGAFAKDAMLKGHPNLQKARTSLNDAQRYIEASQKANEKVWADEGGHGQKAKEAIEKAKSELDAAAEWVNGHVK
Ga0207686_113486302	3300025934	Miscanthus Rhizosphere	MKKLATIAITAAICLPLGAFAKDALVGHPNLEKARTALNDADSWITKSQAANEWDEGGHAKKAKEAISLAKEELKL
Ga0207670_104035322	3300025936	Switchgrass Rhizosphere	MSRLRTIVLTAVIAFPLGAVAKDALRGHPNLEKARASLNDADKWIGKSQEANEGVWKDEGGHGQKAKEHIAQAKEELNRAAEWVNTHK
Ga0207669_100532583	3300025937	Miscanthus Rhizosphere	MSKLKTILITAAVAFPIGILAAGPLKGHPNLEKARAALNDADKYITKSQAANEGVWKDEGGHAKRAKELIAQAKEELEKGAEWVNHH
Ga0207661_107069431	3300025944	Corn Rhizosphere	MSKLRIAVITAAIALPLGAFAKDAMLKGHPNLEKARASLNDAERHITASQKANEGVWKEEGGHGRKAKEAIETAKQELDLAAEWVNKH
Ga0207712_101354372	3300025961	Switchgrass Rhizosphere	MSRLRTIVLTAVIAFPLGAVAKDALKGHPNLEKARASLNDADKWISKSQEANEGVWKDEGGHGQKAKEHIAQAKEELNKAAEWVNTHK
Ga0207641_100827313	3300026088	Switchgrass Rhizosphere	MSRLRTIVLTAVIAFPLGAVAKDALRGHPNLEKARASLNDADKWIGKSQEANEGIWKDEGGHGQKAKEHIAQAKEELNKAAEWVNTHK
Ga0207641_120836772	3300026088	Switchgrass Rhizosphere	MSKTLRTVLITAVIALPLGALAKDVILKGHPNLEKARAALNDADKWISKSQEANEHVWGDEGGHGKKAKEAIANAKHELDLAAEWVNSHPK
Ga0207648_115065032	3300026089	Miscanthus Rhizosphere	MRLPRMQTRIAVLTAVIALPLGAFAKDAMLKGHPNLEKARASLNEADKYITASQKANEKVWGDEGGHGKKAKEAIATAKAELDLAAEWVNSHQK
Ga0207674_109652782	3300026116	Corn Rhizosphere	MTKLRAIVISAAIALPVAALAKDVFLKGHPNLEKARMSLNEADKHITESQKANEKVWADEGGHGKRAKEAIETAKKELDLAAEWVNSHPK
Ga0207683_100175563	3300026121	Miscanthus Rhizosphere	MSKLKTILITAAVAFPIGILAAGPLKGHPNLEKARAALNDADKYITKSQAANEGVWKDEGGHAKKAKELIQQAKEELEKGAEWVNHH
Ga0208992_10642541	3300027176	Forest Soil	MTKFRTVLITAIIALPLGAVAGGALRGHPNLEKARNALNDADRYIQASQHANEGVWKDEGGHGQRAKELIGQAKEQLDKAAEWVNHH
Ga0268266_121564301	3300028379	Switchgrass Rhizosphere	MSKMKTIALTALLAFSGGVLVAGPLKGHPNLEKARAALNDADKYITKSQEANEGVWKDEGGHARKAKELIGQAKEELEKGAEWVNHH
Ga0307511_103843581	3300030521	Ectomycorrhiza	MSKLRVIILTAAIALPLGAFAKDAALRGHPNLEKARAALNEADRYITASQKANEGVWADEGGHGRRAKEAIAT
Ga0302325_121836602	3300031234	Palsa	MKNIKVILITALIALPIGAFAKDMVLKGHPNMQHARASLNDADDYIARSQKANEHVWGDEGGHGQKAKELIGKAKAEMDLAAEWVNSHEK
Ga0265332_100056974	3300031238	Rhizosphere	MSKLRIAVITAAIALPLGAFAKDAMLKGHPNLEKARASLNDADRYITASQKANEHVWSDEGSHGKKAKEAIQTAKQELDLAAEWVNTHGK
Ga0307476_100030315	3300031715	Hardwood Forest Soil	MSKLRIAVITAAIALPLGAFAKDAMLKGHPNLEKARASLNEAERYISASQKANERVWGDEGGHGKKAKEAIESAKQELDLAAEWVNAHPK
Ga0307469_123562511	3300031720	Hardwood Forest Soil	MSKLRTFIIGAAVALPLIALAKDPVLAGHPNLEKARAALNDADKWIAESQKANEHVWGDEGGHGKRAKEAISTAKHELDLAAEWVNSHHK
Ga0308175_10000008815	3300031938	Soil	MSRLRTIVLTAVIAFPLGAVAKDALKGHPNLEKARAALNDAEKFITKSQEANEGVWKEEGGHGQKAKELIGQAKEQLNLAAEWVSTHK
Ga0318558_106849591	3300032044	Soil	MSKLRTIALTAAICLPIGAFAGDVMLKGHPHLQAAHKALNTAMTEITASQKANEKVWGDEGGHGKQAKEAIENAKKELDLAAEWVNSHAK
Ga0307470_103870801	3300032174	Hardwood Forest Soil	MSKLRIAVITAAIALPLGAFAKDVVLKGHPNLEKARAALNEAERHITASQKANERVWGDEGGHGKKAKEAIETAKQELDLAAEWVNSHAK
Ga0307471_1009597702	3300032180	Hardwood Forest Soil	MSKLRIAVLTAVIALPLGAFAKDAMLKGHPNLEKARAALNDADKYITASQKANERVWCDEGGHGKKAKEAIAAAKAELDLAAEWVNSHGK
Ga0307472_1013886091	3300032205	Hardwood Forest Soil	IAVITAAATLALGIPLGAFAKDAMLKGHPNLEKARASLNEAERHITASQKANERVWGDEGGHGKKAKEAIATAKQELDLAAEWVNSHHK
Ga0348332_100401942	3300032515	Plant Litter	AITAAICIPLGVTIAGPLRGHPNLEKARNALNDADSWITKSQQANEAIWKDEGGHGEKAKEAIHAAKEQLDAAAEWVNNHK
Ga0335079_108909792	3300032783	Soil	MSKLRTVLLTAAVAFPIGIMSAGPLRGHPNLERARNALDQADMWIGKSQAANEGVWKDEAGHGQKAKELIGQAKEELRLAAEW
Ga0335081_100193156	3300032892	Soil	MSKLRTVLLTAAVAFPIGIMSAGPLRGHPNLERARNALDQADMWIGKSQAANEGVWKDEAGHGQKAKELIGQAKEELRLAAEWVNHH
Ga0335076_113595651	3300032955	Soil	MSKLRIAVLTAVIALPLGAFAKDAMLKGHPNLEKARAALNDADKYITASQKANERVWGDEGGHGKKAKEAIAAAKAELDLAAEWVNSHEKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103437

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences