Basic Information | |
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Family ID | F103428 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 101 |
Average Sequence Length | 47 residues |
Representative Sequence | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQGEGQDEDPDPARKGSR |
Number of Associated Samples | 78 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 38.61 % |
% of genes near scaffold ends (potentially truncated) | 20.79 % |
% of genes from short scaffolds (< 2000 bps) | 74.26 % |
Associated GOLD sequencing projects | 71 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (45.545 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (30.693 % of family members) |
Environment Ontology (ENVO) | Unclassified (87.129 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (80.198 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 12.50% Coil/Unstructured: 87.50% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Marine Oceanic Marine Marine Marine Seawater Marine Marine Hydrothermal Vent Fluids Diffuse Hydrothermal Fluids Marine Marine Sediment Seawater Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24006J15134_1000208313 | 3300001450 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVEYQGEGQNDDPDPAQKGSEGSY* |
KVRMV2_1001147521 | 3300002231 | Marine Sediment | MIQTESCTGLGGSTQRLHQKEITVVVLFLEELGGETDDPDPHSKRSR* |
Ga0052192_10241341 | 3300003153 | Marine | MIRTESCAGLGGSTQRLHQKEIGMIVLIVKYHGEGQDEDPDPARKGSC* |
Ga0066369_100708784 | 3300005969 | Marine | SLMIRTESCAGLGGSTQRLHQKEIGMIVLLVEYQEGGQDEDPDPARKGSR* |
Ga0066369_101306922 | 3300005969 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLLVECQGEGQNEDPDPTRKGSC* |
Ga0066368_101595122 | 3300006002 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQNEDPEPARKGSR* |
Ga0066382_100122524 | 3300006013 | Marine | MIRTEDCTGLGGSTQRLHQKEIKVVVLFVELLEGESDEPDPYSKRSR* |
Ga0081592_10251401 | 3300006076 | Diffuse Hydrothermal Fluids | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQDEDPDPARKGSC* |
Ga0068504_11250762 | 3300006304 | Marine | MIRTESCAGLGGSTQRLHQKEIGMIVLIVEYQDGGQDEDPDPARKGSR* |
Ga0068469_12108851 | 3300006306 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQGEG |
Ga0068470_11349253 | 3300006308 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQNEDPDPTRKGSC* |
Ga0068471_11013404 | 3300006310 | Marine | MIRTENCTGLGGSTQRLHQKEIGMIVLVEYQEGGQDEDPDPTRKGSR* |
Ga0068471_11013412 | 3300006310 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIVLVEYQGEGQNEDPDPNSKGSR* |
Ga0068471_11013449 | 3300006310 | Marine | LMIQTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQNEDPEPTRKGSR* |
Ga0068471_12395934 | 3300006310 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIILIVEYQGEGQDEDPDPARKGSC* |
Ga0068471_16219261 | 3300006310 | Marine | MIRTESCTGLGGSTQRLHQKEIDMVVLVEYQGEGQNEDPDPTRKGSC* |
Ga0068471_16279994 | 3300006310 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQDEDPDPHSKGSR* |
Ga0068471_16282812 | 3300006310 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQNEDPEPTRKGSR* |
Ga0068478_11475873 | 3300006311 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQGEGQDEDPDPARKGSC* |
Ga0068475_10744204 | 3300006318 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIVLVEYQGEGQDEDPEPHSKGSR* |
Ga0068476_11107701 | 3300006324 | Marine | MMRTESCTGLGGSTQRLHQKEIGMIVLIVEYQEEGQDEDPDPTRKGSC* |
Ga0068477_13905672 | 3300006326 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVIIVEYQEEGQDEDPDPARKGSR* |
Ga0068483_10019677 | 3300006330 | Marine | EYSLMIQTESCTGLGGSTQRLHQKEIGMIVLIVEYQEEGQDEDPDPARKGSR* |
Ga0068488_12139804 | 3300006331 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQEGGQDEDPDPTRKGSR* |
Ga0068480_14106541 | 3300006335 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIVLVEYQGEGQNEDPDPARKGSC* |
Ga0068480_18027932 | 3300006335 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQDEDPDPTRKGSC* |
Ga0068480_18167352 | 3300006335 | Marine | MIRTESCTGLGGSTQRLHQKEIGMVVLVEYQGEGQNEDPEPTRKGSR* |
Ga0068502_11746423 | 3300006336 | Marine | MIRTENCTGLGGSTQRLHQKEIGMIVLVEYQGEGQDEDPDPTRKGSC* |
Ga0068502_11843522 | 3300006336 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIVLVEYQGEGQNEDPDPTRKGSC* |
Ga0068482_11511023 | 3300006338 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQEEGQDEDPDPARKGSC* |
Ga0068481_11357142 | 3300006339 | Marine | MIRTENCTGLGGSTQRLHQKEIGMIVLIVEYQGEGQDEDPDPARKGSC* |
Ga0068481_12155192 | 3300006339 | Marine | MIRTENCTGLGGSTQRLHQKEIGMVVLVEYQGEGQNEDPDPTRKGSC* |
Ga0068481_15159292 | 3300006339 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIVLVEYQGEGQNEDPDPNSKESR* |
Ga0068503_103482362 | 3300006340 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVKYQGEGQDEDPDPARKGSC* |
Ga0068503_103820982 | 3300006340 | Marine | MMRIERLTGLGCNSQRLHQKEIGMIVLIVEYQEGGQDEDPDPARKGSR* |
Ga0068503_103914321 | 3300006340 | Marine | MIQTESCTGLGGSTQRLHQKEIKVVVLFLEELLEGESDDPDPHSKGSR* |
Ga0068503_103918944 | 3300006340 | Marine | MIRTESCSGLGGSTQRLHQKEIGMIVLIVEYQEEGQDEDPDPARKGSR* |
Ga0068503_111616001 | 3300006340 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQEGGQDEDPDPTRKGSS* |
Ga0068493_102844184 | 3300006341 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQGEGQDEDPDPARKGSR* |
Ga0099957_11300731 | 3300006414 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQEGGQDEDPDPTRKGSR* |
Ga0066376_100486796 | 3300006900 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVFKYQGEGQDEDPDPVRKGSR* |
Ga0066376_100936422 | 3300006900 | Marine | MIRTESCAGLGGSTQRLHQKEIGMIVLLVEYQEGGQDEDPDPARKGSR* |
Ga0066366_105688571 | 3300007283 | Marine | MIRTESCTGLGGSTQRLHQKEIKVLVLLLTELLELEGETDDPDPHSKGS |
Ga0066367_10984542 | 3300007291 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQDEDPDPTRKGSR* |
Ga0114905_10102237 | 3300008219 | Deep Ocean | MIRTESCTGLGGSTQRLHQKEIGMIVLIVECQEGGQDEDPD |
Ga0114905_12033561 | 3300008219 | Deep Ocean | YSLMIRTESCTGLGGSTQRLHQKEIGMVVLFFEELLEGESDDPDPHSKRSR* |
Ga0115657_11851952 | 3300008735 | Marine | MIRTESCTGLGGSTQRLHQKESSMIIVTVEYQGEGQNEDPDPTRKGSR* |
Ga0117920_101130510 | 3300009108 | Marine | MIRTESCTGLGGSTQRLHQKESSMVIYQGEGQNEDPDPTRKGSR* |
Ga0114995_108026441 | 3300009172 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIILSVEYQGEGLNDDPDPARKGSR* |
Ga0114996_102588391 | 3300009173 | Marine | GLGGSTQRLHQKEIDMVVLIVEYQGEGQNDDPDPAHKGNEGSY* |
Ga0114996_105928432 | 3300009173 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIILVEYQGEGQNEDPEPARKGSR* |
Ga0114993_100642785 | 3300009409 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVECQGEGQNDDPDPAQKGSEGSY* |
Ga0114908_10475373 | 3300009418 | Deep Ocean | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQNEDPDPACKGSR* |
Ga0114994_100161712 | 3300009420 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVEYQGEGQNDDPDPAHKGNEGSY* |
Ga0114932_100271631 | 3300009481 | Deep Subsurface | MIRTESCTGLGGSTQRLHQKEISMIILFLEELLEGESDDPDPHSKGSC* |
Ga0114901_12215502 | 3300009604 | Deep Ocean | MIRTESCTGLGGSTQRLHQKEIKVLVLLLTELLELEGETDDPDPHSKGSR* |
Ga0114906_12072251 | 3300009605 | Deep Ocean | IEYSLMIRTESCTGLGGSTQRLHQKEIKVLVLLLTELLELEGETDDPDPHNKGSR* |
Ga0115002_100559973 | 3300009706 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVECQGEGQNDDPDPAHKGNEGSY* |
Ga0115002_101515771 | 3300009706 | Marine | MIQTESCTGLGGSTQRLHQKEIGMIILVEYQGEGQNEDPEPARKGSR* |
Ga0133547_107025444 | 3300010883 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLILDYQGEGQDEDPDPASKESR* |
Ga0151674_10129851 | 3300011252 | Marine | SCAGLGGSTQRLHQKEIDMVVLIVECQGEGQNDDPDPAQKGSEGSY* |
Ga0181432_10466471 | 3300017775 | Seawater | ESCTGLGGSTQRLHQKEMGMIVLIVEYQGEGQNEDPDPARKGSC |
Ga0181432_11456252 | 3300017775 | Seawater | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQNEDPDPTRKGSR |
Ga0211549_103181712 | 3300020425 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIVLVEYQGEGQNEDPDPNSKGSR |
Ga0211578_101459823 | 3300020444 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQEGGQDEDPDPTRKGSR |
Ga0211697_101155522 | 3300020458 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQDEDPDPTRKGSC |
Ga0206678_100515401 | 3300021084 | Seawater | MIRTESCTGLGGSTQRLHQKEIGMVVLVEYQGEGQDEDPDPTRKGSC |
Ga0206685_101223331 | 3300021442 | Seawater | LMIRTESCTGLGGSTQRLHQKEIGMVVLVEYQGEGQDEDPDPHSKGSC |
Ga0226832_100979243 | 3300021791 | Hydrothermal Vent Fluids | MIRTESCTGLGGSTQRLHQKEIKVLVLFLTELLELEGETDDPDPRSEGSR |
Ga0232639_12008232 | 3300021977 | Hydrothermal Vent Fluids | MIRTENCAGLGGSTQRLHQKEIKVIILLIELLKGEPDEPDPHSKGNR |
Ga0209992_100216917 | 3300024344 | Deep Subsurface | MIRTESCTGLGGSTQRLHQKEISMIILFLEELLEGESDDPDPHSKGSC |
Ga0209634_10560452 | 3300025138 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVECQGEGQNDDPDPAQKGNEGSY |
Ga0209337_100746610 | 3300025168 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVECQGEGQNDDPDPAQKGSEGSY |
Ga0208180_11356831 | 3300025277 | Deep Ocean | MIRTESCTGLGGSTQRLHQKEIGMVVLVEYQGEGQNEDPDPARKGSC |
Ga0208030_10567712 | 3300025282 | Deep Ocean | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQEGGQDEDPDPTRKGSY |
Ga0208113_10235961 | 3300026087 | Marine | MIRTESCAGLGGSTQRLHQKEIGMIVLVEYQGEGQNEDPEPARKGSR |
Ga0208391_10201141 | 3300026108 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIILSVEYQGEGQNDDPDPTRKASR |
Ga0208560_10168491 | 3300026115 | Marine Oceanic | MIRTESCTGLGGSTQRLHQKEIKVLVLLLTELLELEGETDDPDPHNKGSR |
Ga0208879_10553924 | 3300026253 | Marine | MIRTESCAGLGGSTQRLHQKEIGMIVLLVEYQEGGQDEDPDPARKGSR |
Ga0208879_12213681 | 3300026253 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLLVECQGEGQNEDPDPTRKGSC |
Ga0207991_11641872 | 3300026264 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLLIEYQKEGQDEDPDPARKGS |
Ga0209710_10176553 | 3300027687 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVEYQGEGQNDDPDPAHKGNEGSY |
Ga0209752_10874461 | 3300027699 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQGEGQDEDPDPHSKGSC |
Ga0209709_100194209 | 3300027779 | Marine | MIRTESCTGLGGSTQRLHQKEIDMIILSVEYQGEGLNDDPDPARKGSR |
Ga0209502_100150602 | 3300027780 | Marine | MIRTESCAGLGGSTQRLHQKEIGMVVLIVEYQGEGQNDDPDPAHKGNEGSY |
Ga0257108_11328231 | 3300028190 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLIVKYQGEGQDEDPDPARKGSC |
Ga0257112_102535711 | 3300028489 | Marine | SCAGLGGSTQRLHQKEIGMIVLVVEYQGEGQDEDPDPARKGSC |
Ga0302123_103227591 | 3300031623 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVECQGEGQNDDPD |
Ga0302135_103164541 | 3300031625 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVEYQGEG |
Ga0308004_100038837 | 3300031630 | Marine | MIRTESCTGLGGSTQRLHQKEIGMIVLVVEYQGEGQNEDPDPVRKGSR |
Ga0302117_102146281 | 3300031639 | Marine | MIRTESCAGLGGSTQRLHQKEIDMVVLIVECQGEGQ |
Ga0315328_106010961 | 3300031757 | Seawater | MIRTESCTGLGGSTQRLHQKEIGMVVLVEYQGEGQDEDPDPHSKGSC |
Ga0310122_100292013 | 3300031800 | Marine | MIQTESCTGLGGSAQRLHQKEIKVIILFFEELLEGESDDPDPHSKRSR |
Ga0310121_104384501 | 3300031801 | Marine | MIQTESCTGLGGSTQRLHQKEIGMIILVEYQGEGQNEDP |
Ga0310124_105014991 | 3300031804 | Marine | MIRTESCAGLGGSTQRLHQKEITVVIVEYQGEGQNDDPDPARKRNR |
Ga0310124_105096173 | 3300031804 | Marine | MIQTESCTGLGGSTQRLHQKEIGMIVLVEYQRESQNEDPDPARKGSR |
Ga0315319_102643862 | 3300031861 | Seawater | MIRTESCTGLGGSTQRLHQKEIGMIVLIVEYQEGGQDEDPDPTRKGSC |
Ga0315333_103505543 | 3300032130 | Seawater | MIRTESCTGLGGSTQRLHQKEIGMVVLVEYQGEGQDEDPDPTRKGS |
Ga0310345_102281322 | 3300032278 | Seawater | MIRTENCTGLGGSTQRLHQKEIGMIVLVEYQEGGQDEDPDPTRKGSR |
Ga0315334_111879591 | 3300032360 | Seawater | MIRTESCTGLGGSTQRLHQKEIGMIVLIFEYQEEGQDEDPDP |
Ga0310342_1004578882 | 3300032820 | Seawater | MIRTESCTGLGGSTQRLHQKEIGMIVLVEYQEGGQDEDPDPTRKGSR |
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