Metagenome Family F103426

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103426
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	63 residues
Representative Sequence	MTNINTVTSTAFGRQLQYVVDDNYADAIQQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Number of Associated Samples	56
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.15 %
% of genes near scaffold ends (potentially truncated)	14.85 %
% of genes from short scaffolds (< 2000 bps)	85.15 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.297 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (34.654 % of family members)
Environment Ontology (ENVO)	Unclassified (90.099 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.069 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.07% β-sheet: 13.19% Coil/Unstructured: 52.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF12098	DUF3574	8.91
PF01844	HNH	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
All Organisms	root	All Organisms	29.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Viruses	superkingdom	All Organisms → Viruses	27.72 %
cellular organisms	root	All Organisms → cellular organisms	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.95 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.95 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	4.95 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	4.95 %
Lactobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Podivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Podivirus	3.96 %
Limosilactobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Podivirus S05C243	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Podivirus → Podivirus S05C243	3.96 %
Limosilactobacillus coleohominis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus coleohominis	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000973\|BBAY93_10175498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus coleohominis	537	Open in IMG/M
3300005057\|Ga0068511_1077717	Not Available	574	Open in IMG/M
3300005606\|Ga0066835_10157261	Not Available	755	Open in IMG/M
3300005608\|Ga0066840_10081908	Not Available	664	Open in IMG/M
3300005608\|Ga0066840_10093875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus coleohominis	622	Open in IMG/M
3300006305\|Ga0068468_1000844	All Organisms → Viruses	36743	Open in IMG/M
3300006305\|Ga0068468_1001973	All Organisms → Viruses → Predicted Viral	1530	Open in IMG/M
3300006305\|Ga0068468_1032940	All Organisms → Viruses → Predicted Viral	1267	Open in IMG/M
3300006305\|Ga0068468_1147371	All Organisms → Viruses → Predicted Viral	1244	Open in IMG/M
3300006305\|Ga0068468_1151019	All Organisms → Viruses	811	Open in IMG/M
3300006334\|Ga0099675_1033231	Not Available	651	Open in IMG/M
3300006334\|Ga0099675_1033707	Not Available	679	Open in IMG/M
3300006345\|Ga0099693_1018518	Not Available	5714	Open in IMG/M
3300006345\|Ga0099693_1104680	All Organisms → Viruses → Predicted Viral	1403	Open in IMG/M
3300006345\|Ga0099693_1483472	Not Available	631	Open in IMG/M
3300006350\|Ga0099954_1201251	Not Available	563	Open in IMG/M
3300006480\|Ga0100226_1017377	Not Available	555	Open in IMG/M
3300011013\|Ga0114934_10407138	Not Available	605	Open in IMG/M
3300012952\|Ga0163180_10259897	Not Available	1215	Open in IMG/M
3300012952\|Ga0163180_10448791	Not Available	953	Open in IMG/M
3300012952\|Ga0163180_11440944	Not Available	573	Open in IMG/M
3300012953\|Ga0163179_10709756	Not Available	854	Open in IMG/M
3300012953\|Ga0163179_10976579	Not Available	737	Open in IMG/M
3300012953\|Ga0163179_11101368	Not Available	698	Open in IMG/M
3300012953\|Ga0163179_12087969	Not Available	523	Open in IMG/M
3300017720\|Ga0181383_1057884	All Organisms → Viruses → Predicted Viral	1041	Open in IMG/M
3300017720\|Ga0181383_1063499	Not Available	991	Open in IMG/M
3300017720\|Ga0181383_1086320	Not Available	842	Open in IMG/M
3300017720\|Ga0181383_1088947	Not Available	829	Open in IMG/M
3300017720\|Ga0181383_1104284	Not Available	761	Open in IMG/M
3300017720\|Ga0181383_1147222	Not Available	633	Open in IMG/M
3300017731\|Ga0181416_1030450	All Organisms → Viruses → Predicted Viral	1267	Open in IMG/M
3300017731\|Ga0181416_1037287	All Organisms → Viruses → Predicted Viral	1142	Open in IMG/M
3300017732\|Ga0181415_1019397	All Organisms → Viruses → Predicted Viral	1586	Open in IMG/M
3300017732\|Ga0181415_1021445	All Organisms → Viruses → Predicted Viral	1504	Open in IMG/M
3300017732\|Ga0181415_1068843	Not Available	801	Open in IMG/M
3300017733\|Ga0181426_1049701	Not Available	829	Open in IMG/M
3300017738\|Ga0181428_1164865	Not Available	517	Open in IMG/M
3300017753\|Ga0181407_1069968	Not Available	902	Open in IMG/M
3300017755\|Ga0181411_1222726	Not Available	525	Open in IMG/M
3300017756\|Ga0181382_1019609	All Organisms → Viruses → Predicted Viral	2143	Open in IMG/M
3300017757\|Ga0181420_1215930	Not Available	553	Open in IMG/M
3300017759\|Ga0181414_1064255	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Podivirus → Podivirus S05C243	977	Open in IMG/M
3300017759\|Ga0181414_1097890	Not Available	772	Open in IMG/M
3300017759\|Ga0181414_1127002	Not Available	668	Open in IMG/M
3300017760\|Ga0181408_1016062	All Organisms → Viruses → Predicted Viral	2088	Open in IMG/M
3300017760\|Ga0181408_1042865	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Podivirus → Podivirus S05C243	1221	Open in IMG/M
3300017760\|Ga0181408_1071085	Not Available	916	Open in IMG/M
3300017760\|Ga0181408_1158607	Not Available	582	Open in IMG/M
3300017764\|Ga0181385_1062933	Not Available	1149	Open in IMG/M
3300017764\|Ga0181385_1109983	Not Available	843	Open in IMG/M
3300017764\|Ga0181385_1111750	Not Available	835	Open in IMG/M
3300017764\|Ga0181385_1163033	Not Available	675	Open in IMG/M
3300017767\|Ga0181406_1099178	Not Available	883	Open in IMG/M
3300017768\|Ga0187220_1101577	Not Available	870	Open in IMG/M
3300017768\|Ga0187220_1212823	Not Available	581	Open in IMG/M
3300017768\|Ga0187220_1220242	Not Available	570	Open in IMG/M
3300017768\|Ga0187220_1226552	Not Available	561	Open in IMG/M
3300020246\|Ga0211707_1046130	Not Available	588	Open in IMG/M
3300020255\|Ga0211586_1026112	Not Available	1054	Open in IMG/M
3300020261\|Ga0211534_1044752	Not Available	740	Open in IMG/M
3300020265\|Ga0211533_1053082	Not Available	676	Open in IMG/M
3300020308\|Ga0211693_1015563	Not Available	828	Open in IMG/M
3300020370\|Ga0211672_10205053	Not Available	609	Open in IMG/M
3300020380\|Ga0211498_10048467	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Podivirus → Podivirus S05C243	1582	Open in IMG/M
3300020380\|Ga0211498_10201435	Not Available	752	Open in IMG/M
3300020397\|Ga0211583_10277645	Not Available	604	Open in IMG/M
3300020411\|Ga0211587_10450253	Not Available	518	Open in IMG/M
3300020419\|Ga0211512_10453648	Not Available	575	Open in IMG/M
3300020428\|Ga0211521_10270404	Not Available	761	Open in IMG/M
3300020436\|Ga0211708_10022150	All Organisms → Viruses → Predicted Viral	2413	Open in IMG/M
3300020442\|Ga0211559_10009520	Not Available	5071	Open in IMG/M
3300020448\|Ga0211638_10036388	All Organisms → Viruses → Predicted Viral	2125	Open in IMG/M
3300020448\|Ga0211638_10474526	Not Available	589	Open in IMG/M
3300020448\|Ga0211638_10476428	Not Available	588	Open in IMG/M
3300020448\|Ga0211638_10519388	Not Available	561	Open in IMG/M
3300020451\|Ga0211473_10001916	Not Available	10504	Open in IMG/M
3300020452\|Ga0211545_10112637	All Organisms → Viruses → Predicted Viral	1277	Open in IMG/M
3300020454\|Ga0211548_10233758	Not Available	894	Open in IMG/M
3300020461\|Ga0211535_10110549	All Organisms → Viruses → Predicted Viral	1176	Open in IMG/M
3300020461\|Ga0211535_10409651	Not Available	616	Open in IMG/M
3300020462\|Ga0211546_10008045	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	5461	Open in IMG/M
3300020464\|Ga0211694_10266873	Not Available	714	Open in IMG/M
3300020467\|Ga0211713_10371388	Not Available	692	Open in IMG/M
3300020469\|Ga0211577_10840541	Not Available	525	Open in IMG/M
3300020474\|Ga0211547_10223344	Not Available	964	Open in IMG/M
3300022074\|Ga0224906_1087771	Not Available	933	Open in IMG/M
3300022074\|Ga0224906_1119628	Not Available	763	Open in IMG/M
3300025127\|Ga0209348_1150714	Not Available	683	Open in IMG/M
3300025132\|Ga0209232_1047432	All Organisms → Viruses → Predicted Viral	1583	Open in IMG/M
3300026189\|Ga0208405_1002944	All Organisms → Viruses → Predicted Viral	2866	Open in IMG/M
3300029319\|Ga0183748_1008151	All Organisms → Viruses → Predicted Viral	4593	Open in IMG/M
3300029319\|Ga0183748_1008599	All Organisms → Viruses → Predicted Viral	4430	Open in IMG/M
3300029787\|Ga0183757_1011940	All Organisms → Viruses → Predicted Viral	2406	Open in IMG/M
3300029787\|Ga0183757_1019353	All Organisms → Viruses → Predicted Viral	1660	Open in IMG/M
3300029787\|Ga0183757_1035766	Not Available	987	Open in IMG/M
3300031785\|Ga0310343_10009406	Not Available	5317	Open in IMG/M
3300031785\|Ga0310343_10052617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Podivirus → Podivirus S05C243	2471	Open in IMG/M
3300031785\|Ga0310343_10424438	Not Available	967	Open in IMG/M
3300031785\|Ga0310343_10440384	Not Available	950	Open in IMG/M
3300031785\|Ga0310343_10620454	Not Available	804	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.01%
Algae	Host-Associated → Algae	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.01%
Green Algae	Host-Associated → Algae → Green Algae	0.99%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	34.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified	33.66%
Oceanic	Environmental → Aquatic → Marine → Oceanic	29.70%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.99%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	34.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	33.66%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	17.82%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	11.88%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.99%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	34.65%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	33.66%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	11.88%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.95%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.95%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.99%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.99%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005608	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A	Environmental	Open in IMG/M
3300006305	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025m	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300006345	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075m	Environmental	Open in IMG/M
3300006350	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075m	Environmental	Open in IMG/M
3300006480	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0075m	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300020246	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)	Environmental	Open in IMG/M
3300020255	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556136-ERR599013)	Environmental	Open in IMG/M
3300020261	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556096-ERR598970)	Environmental	Open in IMG/M
3300020265	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556012-ERR599088)	Environmental	Open in IMG/M
3300020308	Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556085-ERR599046)	Environmental	Open in IMG/M
3300020370	Marine microbial communities from Tara Oceans - TARA_B100001029 (ERX556065-ERR599079)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020461	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020464	Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556075-ERR599101)	Environmental	Open in IMG/M
3300020467	Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300026189	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A (SPAdes)	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY93_101754981	3300000973	Macroalgal Surface	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNNVTADSLVAV*
Ga0068511_10777171	3300005057	Marine Water	MTNIKTVTNTAFGKTLHYVVDNNYADAIRQLTGKKTINDKDIVALMQLGLAVNDNTLAELVAS*
Ga0066835_101572612	3300005606	Marine	MTNIKTVTNTAFGKTLHYVLDNNYADAITQLTGKKTINDTDIVALMQLGLAVNNNTLQSALAS*
Ga0066840_100819082	3300005608	Marine	MTDIKTVTNTAFGKTLHYVVDDYYADAIKTLTGKKTINDNDIIALMQLGLTVNNNTLQELIAV*
Ga0066840_100938751	3300005608	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNDVTADSLVAV*
Ga0068468_100084438	3300006305	Marine	MYIRDKEIQNMTNINTVTNTAFGKTLHYVVDDYYADAIKTLTGKKTINDNDIIALMQLGLTVNNNTLQELIAV*
Ga0068468_10019732	3300006305	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAIQQLTGKKTINDKDIVALMQLGLAVNNNTLEAALAS*
Ga0068468_10329402	3300006305	Marine	MTNIKTVSNIAFGRQLHYVLDDNYADAITQLTGKKTINDKDIVALMQLGLAVNNNTLESALAS*
Ga0068468_11473712	3300006305	Marine	MTNIKTVTNIAFGRELHYVLDNNYAEAITQLTGKKTINNKDIAALLQLGLAVNGVTADSLIAV*
Ga0068468_11510193	3300006305	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNNVTA
Ga0099675_10332312	3300006334	Marine	MTNIKTVTNIAFGRELHYVLDNKYADAITQLTGKKTINNKDIAALLQLGLAVNNVTADSLVAV*
Ga0099675_10337072	3300006334	Marine	MTNIKTVTNIAFGRELHYVLDNKYADAITQLTGKKTINNKDIAALMVLGLAVNDVTIDSLVAS*
Ga0099693_10185182	3300006345	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNDVTVDSLVAV*
Ga0099693_11046803	3300006345	Marine	MTNIKTVTNIAFGKELHYVLDNNYADAITQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVTV*
Ga0099693_14834722	3300006345	Marine	MTNIKTVTNIAFGRELHYVLDNKYADAITQLTGKKTINNKDIAALLQLGLAVNGVTADTLVAV*
Ga0099954_12012511	3300006350	Marine	NIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNNVTADSLVAV*
Ga0100226_10173771	3300006480	Marine	VTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNDVTADSLVAV*
Ga0114934_104071383	3300011013	Deep Subsurface	MTNIQTVTSTAFGRQLQYVVDDNYADAIQQLTGKKTINNKDIAALMQLGLAVNNITLDSLVTV*
Ga0163180_102598973	3300012952	Seawater	MTNINTVQTTAFGKTLQYVVDDNYAQAITQLTGKKTVNNKDIAALLQLGLAVNNVTLDSLVTV*
Ga0163180_104487912	3300012952	Seawater	MTNIKTVTSTAFGKTLHYVVDNNLADAIRTLTGKKTINDNDIIALMQLGLAVNNNTLAELLTV*
Ga0163180_114409441	3300012952	Seawater	MTNIKTVTNTAFGKTLHYVVDDYYADAIKVLTGKKTINDNDIIALMQLGLTVNNNTLQELIAV*
Ga0163179_107097562	3300012953	Seawater	MTNIQTVTSTAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVITV*
Ga0163179_109765791	3300012953	Seawater	TSTAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV*
Ga0163179_111013681	3300012953	Seawater	MTNINTVTSTAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV*
Ga0163179_120879691	3300012953	Seawater	MTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV*
Ga0181383_10578841	3300017720	Seawater	MTNINTVTSTAFGRQLQYVVDDNLADAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV
Ga0181383_10634992	3300017720	Seawater	MTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALMQLGLSVNNITLDSLVAV
Ga0181383_10863201	3300017720	Seawater	MTNINTVTTSAFGRQLQYVVDDNYADAIQQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0181383_10889472	3300017720	Seawater	MTNINTVTTSAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVLTV
Ga0181383_11042841	3300017720	Seawater	MTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVTV
Ga0181383_11472221	3300017720	Seawater	MTNIKTVSSTAFGKTLHYVVDNNLADAITTLTGKKTINDNDIIALMQLGLAVNNNTLAELLAV
Ga0181416_10304503	3300017731	Seawater	MTNINTVTTSAFGRSLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCSVNNVTLQDVLTV
Ga0181416_10372871	3300017731	Seawater	MTNIKTVSTSAFGKTLNYVVDNNYADAITQLTGKKTINNKDIAALMQLGCAVNNVTLQDVLTVK
Ga0181415_10193973	3300017732	Seawater	MTNINTVTSTAFGRSLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVLTVK
Ga0181415_10214451	3300017732	Seawater	MTNIQTVTSTAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVIAV
Ga0181415_10688431	3300017732	Seawater	MTNINTVTSTAFGRQLQYVVDDNYADAIQQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0181426_10497012	3300017733	Seawater	MTNINTVTSTAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV
Ga0181428_11648652	3300017738	Seawater	MTNINTVTSTAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALMQLGLSVNNITLDSLVAV
Ga0181407_10699683	3300017753	Seawater	VVDNNLADAITTLTGKKTINDNDIIALMQLGLAVNNNTLAKLIAV
Ga0181411_12227261	3300017755	Seawater	MTNINTVTTSAFGRQLQYVVDDNYADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVLTVK
Ga0181382_10196092	3300017756	Seawater	MYIRDKEIKQMTNINTVTTSAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLEDVIAV
Ga0181420_12159301	3300017757	Seawater	MTNINTVTSTAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALTQLGCAVNYFTL
Ga0181414_10642551	3300017759	Seawater	MTNINTVQTTAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV
Ga0181414_10978901	3300017759	Seawater	MTNINTVTTSAFGRSLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCSVNNVTLQD
Ga0181414_11270021	3300017759	Seawater	MTNIKTVSTSAFGKTLNYVVDNNYADAITQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0181408_10160621	3300017760	Seawater	QTRGLQNMTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALMQLGLSVNNITLDNLVTV
Ga0181408_10428652	3300017760	Seawater	MTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0181408_10710851	3300017760	Seawater	MTNINTVTTSAFGRSLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVLTV
Ga0181408_11586071	3300017760	Seawater	MTNINTVTSTAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNN
Ga0181385_10629332	3300017764	Seawater	MTNINTVTSTAFGRQLQYVVDDNLADAIQQLTGKKTVNNKDIAALMQLGCSVNNVTLQDVLTV
Ga0181385_11099831	3300017764	Seawater	MTNIQTVTSTAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALMQLGLSVNNITLDNLVTV
Ga0181385_11117501	3300017764	Seawater	MTNINTVTTSAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDIITV
Ga0181385_11630331	3300017764	Seawater	MTNINTVQTTAFGKTLQYVVDDNLAQAITQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0181406_10991782	3300017767	Seawater	MTNINTVTTSAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGLSVNNITLDSLVAV
Ga0187220_11015771	3300017768	Seawater	MTNINTVTTSAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVLTVK
Ga0187220_12128232	3300017768	Seawater	MTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLA
Ga0187220_12202421	3300017768	Seawater	MTNINTVTTSAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTL
Ga0187220_12265521	3300017768	Seawater	MTNINTVTSTAFGRQLQYVVDDNLADAIQQLTGKKTVNNKDIAALMQLGCSV
Ga0211707_10461302	3300020246	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNGVTADSLVAV
Ga0211586_10261121	3300020255	Marine	MTNIKTVTNTAFGKTLHYVVDDYYADAIKQLTGKKTINDNDIIALMQLGLSVNDHTLAELVAV
Ga0211534_10447521	3300020261	Marine	MTNIKTVTNIAFGRELHYVLDDNYAQAITQLTGKKTINNKDIAALLQLGLAVNNVTADSLVAV
Ga0211533_10530821	3300020265	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALMQLGLAVNNITADSLVAV
Ga0211693_10155631	3300020308	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINDNDIIALMQLGLTVNDHSLTDLVAV
Ga0211672_102050531	3300020370	Marine	MTNIKTVTNTAFGKTLHYVVDDYYADAIKVLTGKKTINDNDIIALMQLGLTVNNNTLQELIAV
Ga0211498_100484673	3300020380	Marine	MTNIKTVSNIAFGRELHYVLDDNYADAIKTLTGKKTINSNDIIALMQLGLAVNNNTLADVVAV
Ga0211498_102014351	3300020380	Marine	MNIKTVTNTAFGKTLHYVLDDNQADAIRTLTGKKTINDNDIIALMQLGLTVNDNSLSELVAV
Ga0211583_102776451	3300020397	Marine	MNIKTVTSTAFGKTLHYVLDDNQADAIRTLTGKKTINDNDIVALMQLGLAVNDNTLSDLIAV
Ga0211587_104502531	3300020411	Marine	NTAFGKTLHYVLDDNQADAITTLTGKKTINDNDIVALMQLGLAVNGKTLAELIAV
Ga0211512_104536482	3300020419	Marine	QNMTNINTVTSTAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVITV
Ga0211521_102704043	3300020428	Marine	TRGLLNMTNINTVTTTAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALMQLGLSVNNITLDNLVTV
Ga0211708_100221503	3300020436	Marine	MYIRDKEIQNMTNIKTVTNTAFGKTLHYVVDNYYADAITQLTGKKTINNKDIAALMQLGLAVNNNTLETVLAS
Ga0211559_1000952012	3300020442	Marine	MTNIKTVSNIAFGRQLHYVLDDNYADAITQLTGKKTINDKDIVALMQLGLAVNNNTLADVVAS
Ga0211638_100363883	3300020448	Marine	MTNIQTVSTTAFGKTLNYVVDNNYADAITQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0211638_104745261	3300020448	Marine	MTNIKTVKNIAFGRELHYVLDNNYADAITTLTGKKTINNKDIAALLQLGLAVNNVTADSLVAV
Ga0211638_104764281	3300020448	Marine	MTNIKTVSTTAFGKTLNYVVDNNYADAITQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0211638_105193881	3300020448	Marine	MTNIKTVTNTAFGKTMHYVLDNNYADAITQLTGKKTINDKDIVALMQLGLAVNNNSLETALAS
Ga0211473_1000191614	3300020451	Marine	MYIRDKEIQNMTNIQTVSSTAFGKTLHYVTDNNLADAITTLTGKKTINDNDIIALMQLGLAVNNNTLEQLIAV
Ga0211545_101126373	3300020452	Marine	MTNINTVQTTAFGKTLQYVVDDNLAQAIQQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0211548_102337582	3300020454	Marine	MTNINTVTSSAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV
Ga0211535_101105493	3300020461	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNGVTADTLVAV
Ga0211535_104096512	3300020461	Marine	MTNIKTVTNIAFGRELHYVLDNNYAEAITQLTGKKTINNKDIAALLQLGLAVNGVTADSLVAV
Ga0211546_1000804513	3300020462	Marine	MTNIQTVSSTAFGKTLHYVTDNNLADAITTLTGKKTINDNDIIALMQLGLAVNNNTLEQLIAV
Ga0211694_102668732	3300020464	Marine	MTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINDKDIVALMQLGLAVNNNTLQAALAS
Ga0211713_103713881	3300020467	Marine	MTNIKTVTNTAFGKTLHYVLDDNQADAITQLTGKKTINDKDIVALMQLGLAVNNNTLEAALAS
Ga0211577_108405412	3300020469	Marine	MTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALMQLGLSVNNITLDNLVAV
Ga0211547_102233442	3300020474	Marine	MTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV
Ga0224906_10877712	3300022074	Seawater	MTNINTVTSTAFGRQLQYVVDDNYADAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV
Ga0224906_11196281	3300022074	Seawater	MTNINTVTTSAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLEDVIAV
Ga0209348_11507142	3300025127	Marine	MTNIKTVTNVAFGRELHYVVDNNYADAITQLTGKKTINNKDIAALLQLGLAVNDVTVDSLVAV
Ga0209232_10474322	3300025132	Marine	MTNINTVTTSAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGLAVNNVTLDSLVAV
Ga0208405_10029449	3300026189	Marine	MTNIKTVTNTAFGKTLHYVLDNNYADAITQLTGKKTINDTDIVALMQLGLAVNNNTLQSALAS
Ga0183748_10081513	3300029319	Marine	MTNIKTVTNTAFGKTLHYVVDDYYADAITQLTGKKTINDNDIIALMQLGLSVNDKTLSELIAV
Ga0183748_10085991	3300029319	Marine	MTNIKTVTNTAFGKTLHYVLDNNYADAITTLTGKKTINDKDIVALMQLGLAVNNNTLEAALAS
Ga0183757_10119402	3300029787	Marine	MTNINTVTSTAFGRQLQYVVDDNLADAIQQLTGKKTINNKDIAALMQLGCAVNNVTLQDVITV
Ga0183757_10193531	3300029787	Marine	MTNINTVTTSAFGRQLQYVVDDNYAQAIQQLTNKKTINNKDIAALMQLGLSVNNITLDNLVTV
Ga0183757_10357663	3300029787	Marine	NMTNINTVTSTAFGRQLQYVVDDNYAQAIQQLTGKKTVNNKDIAALMQLGLAVNNVTLDSLVAV
Ga0310343_100094069	3300031785	Seawater	LDCYNSSIRQAKELDMTNIKTVTNTAFGKTLHYVVDDYYADAIKVLTGKKTINDNDIIALMQLGLTVNNNTLQELIAV
Ga0310343_100526173	3300031785	Seawater	MYIRDKEFQNMTNIKTVTNTAFGKTLHYVVDNYYADAITQLTGKKTINNKDIAALMQLGLAVNNNTLETVLAS
Ga0310343_104244382	3300031785	Seawater	MTNIKTVSNIAFGRELHYVLNDNYADAITQLTGKKTINDKDIIALMQLGLAVNNNTLADVVAV
Ga0310343_104403841	3300031785	Seawater	MTNIKTVTNIAFGRELHYVLDDNYADAIQQLTGKKTINDNDIVALMQLGLSVNGKSLQELIAV
Ga0310343_106204541	3300031785	Seawater	MYIRDKEIQKMTNIKTVTNIAFGRELHYVLDNNYADAITQLTGKKTINNKDIAALLQLGLAVNDVTADSLVAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103426

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences