Basic Information | |
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Family ID | F103420 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 101 |
Average Sequence Length | 49 residues |
Representative Sequence | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT |
Number of Associated Samples | 55 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 20.79 % |
% of genes from short scaffolds (< 2000 bps) | 76.24 % |
Associated GOLD sequencing projects | 50 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Predicted Viral (42.574 % of family members) |
NCBI Taxonomy ID | 10239 (predicted) |
Taxonomy | All Organisms → Viruses → Predicted Viral |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (28.713 % of family members) |
Environment Ontology (ENVO) | Unclassified (89.109 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (98.020 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 80.00% β-sheet: 0.00% Coil/Unstructured: 20.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Seawater Seawater Marine Plankton Marine Surface Seawater Seawater Marine Surface Seawater Marine Marine Seawater |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
ACM55_10149243 | 3300001829 | Marine Plankton | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYI |
ACM6_10007765 | 3300001832 | Marine Plankton | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIETEFIT* |
GOS2239_10226553 | 3300001962 | Marine | MTHTDNKVSKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETE |
GOScombined01_1022777253 | 3300002040 | Marine | MTHTDNKVSKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETEFIT* |
JGI25127J35165_10639411 | 3300002482 | Marine | MTHTGSKVHKYWNQWYHIIEEDAPELLDEFIMETAKRYGVSRSYIEKEFIT* |
JGI25127J35165_10670121 | 3300002482 | Marine | MTHTGNKVSKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0069134_1579732 | 3300004831 | Surface Seawater | MTPIGKISKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRTYIESEFIT* |
Ga0066830_100356563 | 3300005433 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT* |
Ga0066830_100687922 | 3300005433 | Marine | MTHTGNKVSKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETEFIT* |
Ga0066835_101360443 | 3300005606 | Marine | MTHTDNKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT* |
Ga0066840_100078643 | 3300005608 | Marine | MTHTSKVHKYWNQWYSIIQEDAPELLDEFIMDTAKRYGVSRSYIEREFIT* |
Ga0066840_100678172 | 3300005608 | Marine | MIHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0066840_100860462 | 3300005608 | Marine | MTHTGNKVSKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRKYIESEFIT* |
Ga0066840_101037052 | 3300005608 | Marine | MTHTGNKVSKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRQYIETEFIT* |
Ga0066840_101137722 | 3300005608 | Marine | MTHTGSKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0066840_101157973 | 3300005608 | Marine | YWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETEFIT* |
Ga0066840_101391631 | 3300005608 | Marine | MTHTGKISKYWNQWYSIIKEDAPELLDEFIRDTAKRYGVSRTYIESEFIT* |
Ga0066377_100619545 | 3300005934 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRKYIETEFIT* |
Ga0068468_11026975 | 3300006305 | Marine | MTHTGKVHKYWNQWYSIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT* |
Ga0068468_11475171 | 3300006305 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRQYIETEFIT* |
Ga0068486_13566221 | 3300006329 | Marine | MTHTVKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSR |
Ga0099675_10223104 | 3300006334 | Marine | MTHTGKVHKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIEREFIT* |
Ga0099675_103255419 | 3300006334 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0099675_10377828 | 3300006334 | Marine | MTHTGKVHKYWNQWYSIIEEDAPELLDEFIMDTAKRYGVSRKYIETEFIT* |
Ga0099675_103778311 | 3300006334 | Marine | MTPIGKISKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0099675_10745991 | 3300006334 | Marine | MIHTGKVHKYWNQWYSIIKEDAPELLDEFIRDTAKRYGVSRSYIES |
Ga0099675_11037871 | 3300006334 | Marine | MTHTGKVHKYWNQWYSIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEF |
Ga0099675_14374222 | 3300006334 | Marine | MIHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRKYIETEFIT* |
Ga0099675_15210293 | 3300006334 | Marine | MIHTGKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEREFIT* |
Ga0099693_103633121 | 3300006345 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRRYIETEFIT* |
Ga0099693_10399752 | 3300006345 | Marine | MIHTGKVNKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEREFIT* |
Ga0099693_12410787 | 3300006345 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETEFIT* |
Ga0099693_12447948 | 3300006345 | Marine | MTHTGKVHKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0099693_14413941 | 3300006345 | Marine | MIHTGKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT* |
Ga0099693_15224873 | 3300006345 | Marine | MIHTGKVHKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0099954_10571079 | 3300006350 | Marine | MTHTGKISKYWNQWYSIIKEDAPELLDEFILDTAKRYGVSRSYIESEFIT* |
Ga0099954_12696012 | 3300006350 | Marine | MTHTGKVHKYWNQWYSIIQEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT* |
Ga0099954_13005292 | 3300006350 | Marine | MTHTGKISKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0099954_13470692 | 3300006350 | Marine | MIHTGKVHKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIEREFIT* |
Ga0099954_14679991 | 3300006350 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLNEFIMDTAKRYGVSRSYIEKEFIT* |
Ga0115104_106992473 | 3300009677 | Marine | KYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRTYIESEFIT* |
Ga0115012_113179373 | 3300009790 | Marine | VHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0160422_101025053 | 3300012919 | Seawater | MTHTDNKVSKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRKYIETEFIT* |
Ga0160422_101795031 | 3300012919 | Seawater | MTHTGNKVHKYWNQWYHIIEEDAPELLPQFIEDTAKRYGVSHKYIESEFIT* |
Ga0160422_103865063 | 3300012919 | Seawater | MTHTGNKIHKYWNQWYHIIEEDAPELLPQFIQDTAKRYGVSHKYIESEFIT* |
Ga0160422_107852901 | 3300012919 | Seawater | HKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0160422_110884101 | 3300012919 | Seawater | MTHTDNKISKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRKYIETEFIT* |
Ga0160422_111660813 | 3300012919 | Seawater | WNQWYHIIEEDTPELLDEFIRDTAKRYGVSRSYIEKEFIT* |
Ga0160423_100555656 | 3300012920 | Surface Seawater | MTHTGNKVHKYWNQWYHIIEEDAPELLEEFIRDIAKRYGVSRSYIEKEFIT* |
Ga0163110_107008812 | 3300012928 | Surface Seawater | MTHTDNKVHKYWNQWYHIIEEDAPELLEEFIMDTAKRYGVSRSYIEKEFIT* |
Ga0163110_108325992 | 3300012928 | Surface Seawater | MTHTDNKVHKYWNQWYHIIEEDAPELLPQFIEDTAKRYGVSHKYIESEFIT* |
Ga0163110_111579801 | 3300012928 | Surface Seawater | GKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT* |
Ga0163110_114091092 | 3300012928 | Surface Seawater | MTHTGNKVHKYWSQWYHIIEEDAPELLPQFIDDTAKRYGVSRKYIESEFIT* |
Ga0163109_103355113 | 3300012936 | Surface Seawater | MTHTDNKVHKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIESEFIT* |
Ga0163180_110335921 | 3300012952 | Seawater | MTHTGKISKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRTYIESEFIT* |
Ga0163180_111726303 | 3300012952 | Seawater | MTPIGKISKYWNQWYSIIKEDAPELLDEFIRDTAKRYGVSRTYIESEFIT* |
Ga0163111_122943093 | 3300012954 | Surface Seawater | MTHTGNKVHKYWNQWYHIIKEDAPELLPQFIEDTAKRYGVSHKYI |
Ga0181383_10261584 | 3300017720 | Seawater | MTPIGKISKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIES |
Ga0181415_10228811 | 3300017732 | Seawater | MTPIGKISKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIESEFIT |
Ga0181427_10102933 | 3300017745 | Seawater | MTPIGKISKYWNQWYNIIEEDAPELLDEFIRDTAKRYGVSRTYIESEFIT |
Ga0181425_10486853 | 3300017771 | Seawater | MTPIGKISKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRTY |
Ga0211701_10226822 | 3300020242 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRKYIETEFIT |
Ga0211627_100113515 | 3300020250 | Marine | MTPIGKVSKYWNQWYNIIEEDAPELLDEFIRDTAKRYGVSRTYIESEFIT |
Ga0211700_10034294 | 3300020251 | Marine | MTHTGKVHKYWNQWYSIIQEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT |
Ga0211533_10026286 | 3300020265 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETEFIT |
Ga0211619_10109794 | 3300020288 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRKYIET |
Ga0211474_10038765 | 3300020296 | Marine | MTPIGKISKYWNQWYSIIEEDAPELLDEFILDTARRYGVSRTYIESEFIT |
Ga0211703_101511831 | 3300020367 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRKYIETEFIT |
Ga0211651_100554503 | 3300020408 | Marine | MTHTGSKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT |
Ga0211472_104721451 | 3300020409 | Marine | MIHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT |
Ga0211472_104753643 | 3300020409 | Marine | YWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETEFIT |
Ga0211699_102800253 | 3300020410 | Marine | MIHTGKVHKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT |
Ga0211516_100463144 | 3300020413 | Marine | MTPIGKISKYWNQWYNIIEEDAPELLDEFIRDTARRYGVSRSYIESEFIT |
Ga0211580_102251593 | 3300020420 | Marine | MTHTGKVHKYWNQWYSIIQEDAPELLDEFIMDTAKRYGVSRSYIEREFIT |
Ga0211565_100293126 | 3300020433 | Marine | MTHTDNKVSKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRKYIETEFIT |
Ga0211558_101068953 | 3300020439 | Marine | MTHTGKVHKYWNQWYSIIEEDAPELLNEFIMDTAKRYGVSRSYIEKEFIT |
Ga0211638_101958373 | 3300020448 | Marine | MTHTSKVHKYWNQWYSIIEEDAPELLDEFIIDTAKRYGVSRSYIEKEFIT |
Ga0211638_103134811 | 3300020448 | Marine | MTPIGKISKYWNQWYSIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT |
Ga0211638_105317621 | 3300020448 | Marine | MTQTGKVHKYWNQWYSIIEEDAPELLDEFIQDTAKRYGVSRSYIEKEFIT |
Ga0211548_100193991 | 3300020454 | Marine | FIMTPIGKISKYWNQWYSIIKEDAPELLDEFIRDTAKRYGVSRTYIESEFIT |
Ga0211713_100225893 | 3300020467 | Marine | MTHTGKISKYWNQWYSIIEEDAPELLDEFIMDTAKRYGVSRSYIETEFIT |
Ga0211713_101822653 | 3300020467 | Marine | MTPIGKISKYWNQWYSIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT |
Ga0211475_100758881 | 3300020468 | Marine | MTPIGKISKYWNQWYSIIEEDAPELLDEFIRDTARRYGVSRTYIESEFIT |
Ga0211614_101456192 | 3300020471 | Marine | MTHTDNKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRKYIETEFIT |
Ga0211614_101531285 | 3300020471 | Marine | PIGKISKYWNQWYSIIEEDAPELLDEFILDTAKRYGVSRTYIESEFIT |
Ga0224906_10409273 | 3300022074 | Seawater | MTPIGKISKYWNQWYNIIEEDAPELLDEFIRDTAKRYGVSRSYIESEFIT |
Ga0209348_100171519 | 3300025127 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIESEFIT |
Ga0209348_10512433 | 3300025127 | Marine | MTHTGNKVSKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT |
Ga0209348_11647332 | 3300025127 | Marine | MTHTGSKVHKYWNQWYHIIEEDAPELLDEFIMETAKRYGVSRSYIEKEFIT |
Ga0209348_12259021 | 3300025127 | Marine | MTHTDNKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT |
Ga0209232_10823382 | 3300025132 | Marine | MTHTGKISKYWNQWYSIIKEDAPELLDEFIRDTAKRYGVSRTYIESEFIT |
Ga0209645_10225165 | 3300025151 | Marine | MTHTGNKVSKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETEFIT |
Ga0208763_10073452 | 3300026136 | Marine | MTHTGNKVSKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRQYIETEFIT |
Ga0208405_10068633 | 3300026189 | Marine | MTHTSKVHKYWNQWYSIIQEDAPELLDEFIMDTAKRYGVSRSYIEREFIT |
Ga0208405_10256202 | 3300026189 | Marine | MTHTGSKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRSYIEKEFIT |
Ga0208405_10464213 | 3300026189 | Marine | MTHTGNKVSKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRKYIESEFIT |
Ga0183748_11169473 | 3300029319 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLNEFIMDTAKRYGVSRSYIEKEFIT |
Ga0183826_10576521 | 3300029792 | Marine | KVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFIT |
Ga0183826_10615962 | 3300029792 | Marine | MTHTGKVHKYWNQWYHIIEEDAPELLDEFIMDTAKRYGVSRSYIEKEFITXLFL |
Ga0310343_105095743 | 3300031785 | Seawater | MIHTGKVHKYWNQWYHIIEEDAPELLEEFIRDTAKRYGVSRKYIETEFIT |
Ga0310343_112132583 | 3300031785 | Seawater | FFMTHTGKVHKYWNQWYHIIEEDAPELLDEFIRDTAKRYGVSRQYIETEFIT |
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