NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F103419

Metagenome Family F103419

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103419
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 41 residues
Representative Sequence TQAISTQGFSSICEANDEEGNKKLEQIKIAKKSICINRRI
Number of Associated Samples 28
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.99 %
% of genes near scaffold ends (potentially truncated) 98.02 %
% of genes from short scaffolds (< 2000 bps) 99.01 %
Associated GOLD sequencing projects 28
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.079 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine
(64.356 % of family members)
Environment Ontology (ENVO) Unclassified
(97.030 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.059 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.53%    β-sheet: 0.00%    Coil/Unstructured: 51.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF07386DUF1499 0.99
PF02566OsmC 0.99
PF01053Cys_Met_Meta_PP 0.99
PF01475FUR 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 0.99
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 0.99
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.99
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.99
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.99
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.99
COG0735Fe2+ or Zn2+ uptake regulation protein Fur/ZurInorganic ion transport and metabolism [P] 0.99
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.99
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.99
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 0.99
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 0.99
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 0.99
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.99
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 0.99
COG4446Uncharacterized conserved protein, DUF1499 familyFunction unknown [S] 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.08 %
UnclassifiedrootN/A7.92 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001962|GOS2239_1051468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1830Open in IMG/M
3300002040|GOScombined01_104945588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus936Open in IMG/M
3300005606|Ga0066835_10277319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus577Open in IMG/M
3300005960|Ga0066364_10127790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus864Open in IMG/M
3300005960|Ga0066364_10136600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus836Open in IMG/M
3300005960|Ga0066364_10185823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus718Open in IMG/M
3300005960|Ga0066364_10301029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus562Open in IMG/M
3300006305|Ga0068468_1117626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1107Open in IMG/M
3300006329|Ga0068486_1264150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus957Open in IMG/M
3300006329|Ga0068486_1266463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales733Open in IMG/M
3300006329|Ga0068486_1500054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus572Open in IMG/M
3300006334|Ga0099675_1119125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus750Open in IMG/M
3300006334|Ga0099675_1217449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus826Open in IMG/M
3300006334|Ga0099675_1232674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1283Open in IMG/M
3300006334|Ga0099675_1323943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus544Open in IMG/M
3300006334|Ga0099675_1331378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus795Open in IMG/M
3300006334|Ga0099675_1336360Not Available560Open in IMG/M
3300006334|Ga0099675_1402358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus892Open in IMG/M
3300006334|Ga0099675_1510911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus667Open in IMG/M
3300006337|Ga0068495_1237239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus516Open in IMG/M
3300006337|Ga0068495_1300119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus802Open in IMG/M
3300006337|Ga0068495_1312976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1001Open in IMG/M
3300006337|Ga0068495_1335750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus878Open in IMG/M
3300006337|Ga0068495_1475119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus717Open in IMG/M
3300006337|Ga0068495_1521564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus732Open in IMG/M
3300006337|Ga0068495_1626675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus578Open in IMG/M
3300006337|Ga0068495_1812634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus550Open in IMG/M
3300006345|Ga0099693_1164674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus931Open in IMG/M
3300006345|Ga0099693_1167160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1208Open in IMG/M
3300006345|Ga0099693_1185291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus968Open in IMG/M
3300006345|Ga0099693_1211972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus964Open in IMG/M
3300006345|Ga0099693_1298866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus545Open in IMG/M
3300006345|Ga0099693_1311671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus909Open in IMG/M
3300006345|Ga0099693_1334047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus542Open in IMG/M
3300006345|Ga0099693_1336637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus844Open in IMG/M
3300006345|Ga0099693_1381418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus683Open in IMG/M
3300006345|Ga0099693_1505517Not Available528Open in IMG/M
3300006345|Ga0099693_1582844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus532Open in IMG/M
3300006350|Ga0099954_1115347Not Available1212Open in IMG/M
3300006350|Ga0099954_1225232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus736Open in IMG/M
3300006350|Ga0099954_1259397Not Available687Open in IMG/M
3300006351|Ga0099953_1164170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus722Open in IMG/M
3300006351|Ga0099953_1187577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus755Open in IMG/M
3300006351|Ga0099953_1201133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus967Open in IMG/M
3300006351|Ga0099953_1209805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus515Open in IMG/M
3300006351|Ga0099953_1277588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus719Open in IMG/M
3300006351|Ga0099953_1279870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus516Open in IMG/M
3300006351|Ga0099953_1283867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1027Open in IMG/M
3300006351|Ga0099953_1306562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus692Open in IMG/M
3300006351|Ga0099953_1312064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus641Open in IMG/M
3300006413|Ga0099963_1095802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus2835Open in IMG/M
3300006413|Ga0099963_1149394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus919Open in IMG/M
3300006413|Ga0099963_1166123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus593Open in IMG/M
3300006413|Ga0099963_1234843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus542Open in IMG/M
3300006413|Ga0099963_1244523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus570Open in IMG/M
3300006413|Ga0099963_1256566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus610Open in IMG/M
3300006413|Ga0099963_1329357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus860Open in IMG/M
3300006480|Ga0100226_1014770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus713Open in IMG/M
3300006480|Ga0100226_1200049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus757Open in IMG/M
3300006480|Ga0100226_1224593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus539Open in IMG/M
3300006480|Ga0100226_1233499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1148Open in IMG/M
3300006480|Ga0100226_1252114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus537Open in IMG/M
3300006480|Ga0100226_1290823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus624Open in IMG/M
3300006480|Ga0100226_1335402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus646Open in IMG/M
3300006480|Ga0100226_1409451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus683Open in IMG/M
3300006481|Ga0100229_1201599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus760Open in IMG/M
3300006481|Ga0100229_1233549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus698Open in IMG/M
3300006481|Ga0100229_1249934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus561Open in IMG/M
3300006481|Ga0100229_1274433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus882Open in IMG/M
3300006481|Ga0100229_1299305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus785Open in IMG/M
3300006481|Ga0100229_1364624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus940Open in IMG/M
3300006481|Ga0100229_1368125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus669Open in IMG/M
3300006481|Ga0100229_1383236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus552Open in IMG/M
3300006481|Ga0100229_1457650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus562Open in IMG/M
3300006481|Ga0100229_1638100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus596Open in IMG/M
3300012919|Ga0160422_10488757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus774Open in IMG/M
3300012919|Ga0160422_11025005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus534Open in IMG/M
3300012936|Ga0163109_11008257All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus608Open in IMG/M
3300012936|Ga0163109_11303998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus529Open in IMG/M
3300012936|Ga0163109_11373363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus515Open in IMG/M
3300020323|Ga0211673_1063486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus675Open in IMG/M
3300020371|Ga0211500_1165545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus644Open in IMG/M
3300020386|Ga0211582_10405816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus508Open in IMG/M
3300020391|Ga0211675_10251280All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus758Open in IMG/M
3300020393|Ga0211618_10285550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus553Open in IMG/M
3300020406|Ga0211668_10226684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus730Open in IMG/M
3300020406|Ga0211668_10352097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus558Open in IMG/M
3300020418|Ga0211557_10538545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus505Open in IMG/M
3300020424|Ga0211620_10436357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus554Open in IMG/M
3300020433|Ga0211565_10308371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus690Open in IMG/M
3300020448|Ga0211638_10162641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1016Open in IMG/M
3300020448|Ga0211638_10318524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus724Open in IMG/M
3300020448|Ga0211638_10436595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus615Open in IMG/M
3300020448|Ga0211638_10585502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus525Open in IMG/M
3300020456|Ga0211551_10561236Not Available543Open in IMG/M
3300031785|Ga0310343_10274712Not Available1183Open in IMG/M
3300031785|Ga0310343_10372446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1028Open in IMG/M
3300031785|Ga0310343_10418825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus973Open in IMG/M
3300031785|Ga0310343_10959523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus str. SB645Open in IMG/M
3300031785|Ga0310343_11359058Not Available537Open in IMG/M
3300031785|Ga0310343_11365679Not Available535Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine64.36%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine15.84%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater5.94%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine4.95%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater2.97%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine2.97%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater1.98%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001962Marine microbial communities from Cocos Island, Costa Rica - GS023EnvironmentalOpen in IMG/M
3300002040GS000c - Sargasso Station 3EnvironmentalOpen in IMG/M
3300005606Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84EnvironmentalOpen in IMG/M
3300005960Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_AEnvironmentalOpen in IMG/M
3300006305Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025mEnvironmentalOpen in IMG/M
3300006329Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500mEnvironmentalOpen in IMG/M
3300006334Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025mEnvironmentalOpen in IMG/M
3300006337Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025mEnvironmentalOpen in IMG/M
3300006345Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075mEnvironmentalOpen in IMG/M
3300006350Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075mEnvironmentalOpen in IMG/M
3300006351Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0045mEnvironmentalOpen in IMG/M
3300006413Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0025mEnvironmentalOpen in IMG/M
3300006480Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0075mEnvironmentalOpen in IMG/M
3300006481Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0025mEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300020323Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX555979-ERR599120)EnvironmentalOpen in IMG/M
3300020371Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555978-ERR598991)EnvironmentalOpen in IMG/M
3300020386Marine microbial communities from Tara Oceans - TARA_B100000609 (ERX555990-ERR599038)EnvironmentalOpen in IMG/M
3300020391Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)EnvironmentalOpen in IMG/M
3300020393Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)EnvironmentalOpen in IMG/M
3300020406Marine microbial communities from Tara Oceans - TARA_B100000886 (ERX555926-ERR599024)EnvironmentalOpen in IMG/M
3300020418Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)EnvironmentalOpen in IMG/M
3300020424Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)EnvironmentalOpen in IMG/M
3300020433Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)EnvironmentalOpen in IMG/M
3300020448Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)EnvironmentalOpen in IMG/M
3300020456Marine microbial communities from Tara Oceans - TARA_B100001741 (ERX555984-ERR599123)EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GOS2239_105146823300001962MarineQSSRTQ*AISTQGFSSICEANDVEGNKKLEQIKIVKKSIFINRKI*
GOScombined01_10494558813300002040MarineQGFSSICEANDEEGNKKLEQIKIVKKSICINRRI*
Ga0066835_1027731913300005606MarineAISTQGFSSICEANDEEGNKKLEQIKIVKKSICINRRI*
Ga0066364_1012779023300005960MarineSSRTQ*AISTQGFSSICEANDEEGNIKLEQIKIAKKSICINKRI*
Ga0066364_1013660013300005960MarineSTQGFSSICEANDDEGNKKLEQIKIAKKSIRINRRI*
Ga0066364_1018582323300005960MarineQGFSSICEANDEEGNIKLEQIKIAKKSICINRRI*
Ga0066364_1030102913300005960MarineTQGFSSICEANDEEGNIKLEQIKIAKKSICIYRKT*
Ga0068468_111762613300006305MarineRTQ*AISIQGFSSTCEANDEEGNKKLEQIKNAKKSIFINRKI*
Ga0068486_126415023300006329MarineQ*ATSIQGFNSKCEANDEEGNKKLKQIKNVKKSIFINRRT*
Ga0068486_126646313300006329MarineLTSHSSRTQ*EISTQGFSSK*EANDEEGNKKLEQIKIAKKSICISRRI*
Ga0068486_150005413300006329MarineTSHSSRTQ*AISTQGFSSICEANDEEGSIKLEQIKIAKKIIFIYREI*
Ga0099675_111912523300006334MarineAISTQGFSSICEAKDEEGNIKLEQIKIDKKSICINRRI*
Ga0099675_121744913300006334MarineAISTQGFSSTCEANDEEGNIKLEQIKIAKKSICINRRI*
Ga0099675_123267433300006334MarineSTQGFSSICEANDEEGNIKLEQIKIAKKSICINRRI*
Ga0099675_132394313300006334MarineSSRTQ*AISTQGFSSICEANDEEGNIKLEQIKIAKKSICINRKI*
Ga0099675_133137813300006334MarineSSRTQ*AISTQGKSSTSEAKDEQGNKKLEQIKIAKKSIFINRRI*
Ga0099675_133636013300006334MarineKLLTSHSSRTQ*ANSTQGYSSTCEANDEEGNKKLEQIKNAKKSICINRRI*
Ga0099675_140235833300006334Marine*AISTQGFSSICEANDKEGNIKLEQIKIAKKSICINRRN*
Ga0099675_151091113300006334MarineTQGFSSICEAKDEEGNKKLEQIKIAKKSICINRRI*
Ga0068495_123723913300006337MarineAISTQGFSSTCEANDEEGNKKLEQIKIAKKSIFINR*
Ga0068495_130011913300006337MarineQ*AISIQGFSSICEANDVEGNKKLEQIKIVKKSICINRRI*
Ga0068495_131297623300006337MarineQ*AISTQGFSSTCEANDEEGNKKLEQIKIAKKSICINRKI*
Ga0068495_133575033300006337MarineTQGFSSICEANDAEGNKKLEQIKIAKKSICINRRI*
Ga0068495_147511923300006337MarineTQGFSSICEANDEEGNIKLEQIKIAKKSICINRRI*
Ga0068495_152156413300006337Marine*AISTQGLSSICEANVEEGNKKLEQIKIAKKSIFINRRI*
Ga0068495_162667523300006337MarineSRTQ*AISTQGLSSTCEAYDEEGNKKFEQIKIAKKSIFINRLI*
Ga0068495_181263413300006337MarineTQ*AISTQGLSSICEAKDAEGNKKLEQIKIAKKSICINRKI*
Ga0099693_116467433300006345MarineHSSSTQ*AISTQGLSSTCEANDEEGNKKLEQIKIAKKSIFINKGI*
Ga0099693_116716043300006345MarineSTQGFSSICEANDEEGNKKLEQIKIVKKSICINRKI*
Ga0099693_118529113300006345Marine*AISTQGFSSICEANDVEGNKKHEQIKIVKKNIFINRRI*
Ga0099693_121197213300006345MarineSTQGFSSICEANDEEGNKKLEQIKIVKKSICINRRI*
Ga0099693_129886613300006345MarineHSSRTQ*AISTQGFSSICEANDVEGNKKLEQIKNAKKSIFIKRGI*
Ga0099693_131167113300006345MarineQSSRTQ*AISKQGFSSTCEANDEDGNKKLEQTKITKKSIFINRRI*
Ga0099693_133404713300006345MarineSSRTQ*AISTQGFSSICEANDEEGNKKLEQIKIAKKSICINRRI*
Ga0099693_133663713300006345MarineSSRTQ*AISTQGFSSICEANDEEGNKKLEKIKIVKKSICINRRN*
Ga0099693_138141823300006345MarineSTQGFSSICEANDEEGNKKLEQIKIAKKSICINRRI*
Ga0099693_150551713300006345MarineQGFSFTCEANDEEGNKKLEQIKIAKKSICIKRRI*
Ga0099693_158284413300006345MarineSTQGFSSICEANDEEGNKKLAQIKIVKKSICINRRI*
Ga0099954_111534713300006350MarineAISTQGFSSICEANDEEGNKKLEQIKIVIKSICINRRI*
Ga0099954_122523223300006350MarineSRTQ*AISTQGFSSTCEANDEEGNIKLEQIKIAKKSICINRRI*
Ga0099954_125939713300006350MarineRTQ*AISTQGFSSTCDANDEEGNKKLEQIKIAKKSIFINRVI*
Ga0099953_116417013300006351MarineQ*AISTQGFSSTCEANDEEGNKKLEQNKIAKKSIFINKGVNKP*
Ga0099953_118757713300006351MarineHSSRTQ*AISTQGFSSICEANDEEGNKKLEQIKIAKKSICINRRI*
Ga0099953_120113313300006351Marine*AISTQGFSSICEANDEEGSIKLEQIKIAKKSICIYRRI*
Ga0099953_120980513300006351MarineHSSRTQ*AISTQGFSSICEANDEEGNKKLEQIKIVKKSICINRRI*
Ga0099953_127758823300006351Marine*AISTQGFSSRCEANDEEGNKKLEQIKIVKKSIRINRRI*
Ga0099953_127987013300006351MarineTQGFSSICEANDEEGNRKLEQIKIAKKSIFIIRRI*
Ga0099953_128386713300006351MarineRTQ*AISTQGFSSICEANDEEGNKKFEQIKIVKKSIFINIRI*
Ga0099953_130656213300006351MarineTQGFSTICEANDEEGNKKLEKIKIVKKSICINRRV*
Ga0099953_131206413300006351MarineRTQ*AISTQGFSSTCEAKDEEGNKKLEQNKIAKKSIFINRRI*
Ga0099963_109580213300006413MarineAISTQGLSSTFEANDEEGNKKLEQIKIAKKSIFINRRI*
Ga0099963_114939413300006413MarineTQGFSSICEANDEEGNKKLEQIKNAKKSIFINRGI*
Ga0099963_116612313300006413MarineSRTQ*AISTHGFSSTCEANDEEGNKKFEQIKIAKKSIFINRRI*
Ga0099963_123484313300006413MarineSRTQ*AISTQGFSSICEANDEEGSIKLEQIKIAKKSICIYRRI*
Ga0099963_124452313300006413MarineHSSRTQ*AISTQGFSSICEANDEEGNNKLEHIKIVNKSICINRRLNHS*
Ga0099963_125656613300006413MarineSILLTSHSSRTQCAISTQGFSSTCEANDEEGNKKLEQIKIAKKSIFFNRRI*
Ga0099963_132935713300006413MarineISTQGFSSICEANDEEGNIKLEQIKIAKKSICINRRI*
Ga0100226_101477013300006480MarineSRTQ*AISTQGFSSICEANDEEGNKKLEKIKIAKKSIFINRGI*
Ga0100226_120004913300006480MarineSSRTQ*AISTQGFSSTCEANDEEGKKKLEQIKIAIKSIFINRRI*
Ga0100226_122459313300006480MarineSSRTQ*AISTQGFNSICEANDEEGNKKLEQIKIVKKSICINRKI*
Ga0100226_123349913300006480MarineLLTSHSSRTQCAISTLGFSSMSEANEEEGNKKLEQIKIAKKSIFINRGILTTYNLTN*
Ga0100226_125211413300006480MarineSRTQ*AISTQGFSSICEANDEEGNKKLEQIKIAKKSICINRRS*
Ga0100226_129082313300006480MarineSRTQ*AISTQGFSSICEANDEEGNKKLEQIKIVKKSICINRRI*
Ga0100226_133540223300006480MarineRTQ*AISTQGFSSICEANDEEGNKKLEKIKIVKNSICINRRV*
Ga0100226_140945113300006480MarineHSSRTQ*AISTQGLSSTCEANDEEGNKKLEQIKIAKKSIFINRGI*
Ga0100229_120159913300006481MarineISTQGFSSTCEANEEEGNKKLEQIKIAKKSIFINRKIKQIII*
Ga0100229_123354923300006481MarineQ*AISTQGFSSTCEANDEEGNKKLEQIKIAKKSIFINRRI*
Ga0100229_124993413300006481MarineQ*AISTQGFSSKCEANDEEGNKKLEQIKIAKKSICINRRI*
Ga0100229_127443333300006481MarineSTQGFSSICEAKDEEGNKKLVQIKIVKKSICINRRI*
Ga0100229_129930523300006481MarineLTFHSSRTQ*AISTQGFSSTCEANDEEGNKKLEQIKNAKKSICINRGI*
Ga0100229_136462413300006481MarineSSRTQ*AISTQGFSSTCEANDDEGNKKVEQIKIAKKSIFINRRI*
Ga0100229_136812513300006481MarineQ*AISTQGFSSICEANDEEGNKKLEQIKIVKKSICINIRI*
Ga0100229_138323613300006481MarineQ*EISTQGFSSICEANDEEGNKKLEQIKIAKKSICINRRI*
Ga0100229_145765013300006481MarineTQ*AISTQGFSSICEANDEEGNKKLEQIKIAKKSICINRRI*
Ga0100229_163810013300006481MarineQ*AISTQGFSSTCEANDEEGNKKFEQIKIAKKSIFINRRIHNP*
Ga0160422_1048875723300012919SeawaterISTQGFSSTCEANDEEGNKMLEQSKTAKKSIFIN*
Ga0160422_1102500513300012919SeawaterHSSLTQCAISTQGFSSTCEANDEEGKKKLEQIKIAKKSIFIIKRI*
Ga0163109_1100825713300012936Surface SeawaterCAISTQGFSSTCEANDEEGNKKLEQIKIAKKSIFINRRI*
Ga0163109_1130399813300012936Surface SeawaterSRTQ*AISTQGFSSICEANDEEGNKKLEQIKIAKKSICINRRI*
Ga0163109_1137336313300012936Surface SeawaterSRTQ*AISTQGFSSTCEANDEEGNKKLEQIKIAKKSIVISRSI*
Ga0211673_106348613300020323MarineFSSTCEANDEEGNKKLEQNKIAKKSIFINKGVNKL
Ga0211500_116554513300020371MarineTQXAISTQGFSSICEANDEEGNKKLEQIKIAKKSIFINRRFIES
Ga0211582_1040581613300020386MarineKGSSILLTSHSSRTQXATSMHGFNSKCEANDEEGNKKLEESKIARKSIFINIRI
Ga0211675_1025128013300020391MarineHSSRTQXAISTQGFSSICEANDEEGNKKLEKIKIVKKSIFINRRI
Ga0211618_1028555013300020393MarineSTQGFSSTCEANDEEGNRKLEQIKIAKKSIFIIFRIK
Ga0211668_1022668413300020406MarineSILLTFHSSRTQCAISTQGFSSTCEANDEEGYKKLEKIKIAKKSIFINRRIKQTII
Ga0211668_1035209713300020406MarineRTQXAISTQGFSSICEASEEEGDKKLEQIKIAKKSNFINRGI
Ga0211557_1053854513300020418MarineSSRTQXAISTQGFSSICEANDEEGNIKLEQIKIAKKSICIYRRI
Ga0211620_1043635713300020424MarineISTQGFSSTCEANDEEGNKKLEQIKNAKKAICINRRI
Ga0211565_1030837113300020433MarineXAISTQGFSSTXEANDEEGNKKLEQIKIARKSIFINRVINKA
Ga0211638_1016264113300020448MarineCSTSTQGFSSTCEANEQEGNRKLEKIKSARKNIFINSRNK
Ga0211638_1031852413300020448MarineAISTQGFSSTCEANDEEGNKKLEQIKIAKKSIFINRRI
Ga0211638_1043659513300020448MarineGFSSTCEANDEEGNKKLEQIKIARKSIFINRGVSHNII
Ga0211638_1058550213300020448MarineTQCAISTQGFSSTCEANDEEGNKKFKQTKIPRKRIFIKMMIQQGII
Ga0211551_1056123613300020456MarineTQGFSSICEANDEEGNKKLEQIKIVNKSICINRRI
Ga0310343_1027471223300031785SeawaterAISTQGFSSICEANDEEGNKKLEQIKNAKKSICINRRI
Ga0310343_1037244613300031785SeawaterSRTQXAISTQGFSSICEANDEEGNKKLEQIKIAKKSICINRKI
Ga0310343_1041882513300031785SeawaterTQGFNFICEANDEEGNKKLEQIKIAKKSICINRRI
Ga0310343_1095952313300031785SeawaterSSRTQXAISTQGFSSMCEANDEEGNIKLEQIKNAKKSTCINRRI
Ga0310343_1135905813300031785SeawaterSICEANDEEGNKKLEQNKIAKKSIFIKRRIYQHLI
Ga0310343_1136567913300031785SeawaterSTXEANDEEGNKKLEQIKIAKKSIFINREIQQSII


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