Metagenome / Metatranscriptome Family F103414

Overview

Basic Information

• Family ID: F103414
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 101
• Average Sequence Length: 63 residues
• Representative Sequence: LSSFIFRAAGFQEIVSLLKETNQRLKNLERLLEFTLSPPDLAKYKKGMSLDDIPRKKLSDQA
• Number of Associated Samples: 51
• Number of Associated Scaffolds: 101

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 77.23 %
• % of genes near scaffold ends (potentially truncated): 17.82 %
• % of genes from short scaffolds (< 2000 bps): 74.26 %
• Associated GOLD sequencing projects: 49
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (67.327 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (21.782 % of family members)
• Environment Ontology (ENVO): Unclassified (96.040 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (65.347 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 54.44%
  β-sheet: 0.00%
  Coil/Unstructured: 45.56%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF04860	Phage_portal	3.96
PF00413	Peptidase_M10	0.99
PF00465	Fe-ADH	0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.99
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.99
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.99
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.99
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.99

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
All Organisms	root	All Organisms	32.67 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Viruses	superkingdom	All Organisms → Viruses	20.79 %
cellular organisms	root	All Organisms → cellular organisms	11.88 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.88 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.95 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.99 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.95 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.99 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.95 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.99 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.95 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.99 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.95 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.99 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.95 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.99 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000142|LPaug09P16500mDRAFT_c1027871	Not Available	897
3300000142|LPaug09P16500mDRAFT_c1036897	Not Available	740
3300000142|LPaug09P16500mDRAFT_c1052599	Not Available	585
3300000179|LPjun09P16500mDRAFT_c1040059	Not Available	630
3300002511|JGI25131J35506_1005866	All Organisms → Viruses → Predicted Viral	1734
3300002760|JGI25136J39404_1011377	All Organisms → cellular organisms → Bacteria	1584
3300003539|FS891DNA_10248182	Not Available	511
3300006011|Ga0066373_10041098	Not Available	1248
3300006308|Ga0068470_1092720	All Organisms → cellular organisms → Bacteria	4240
3300006308|Ga0068470_1117022	Not Available	650
3300006308|Ga0068470_1194715	Not Available	1154
3300006308|Ga0068470_1585096	Not Available	737
3300006310|Ga0068471_1064899	All Organisms → Viruses → Predicted Viral	4234
3300006310|Ga0068471_1099001	All Organisms → Viruses → Predicted Viral	3326
3300006310|Ga0068471_1154072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4583
3300006310|Ga0068471_1163147	All Organisms → cellular organisms → Bacteria	6135
3300006310|Ga0068471_1432401	All Organisms → Viruses → Predicted Viral	2013
3300006310|Ga0068471_1564054	All Organisms → Viruses → Predicted Viral	1589
3300006310|Ga0068471_1566469	Not Available	1638
3300006323|Ga0068497_1099502	All Organisms → Viruses → Predicted Viral	2011
3300006324|Ga0068476_1081213	All Organisms → Viruses → Predicted Viral	4386
3300006325|Ga0068501_1246431	Not Available	607
3300006335|Ga0068480_1442777	Not Available	708
3300006336|Ga0068502_1173896	All Organisms → Viruses → Predicted Viral	2125
3300006336|Ga0068502_1186577	All Organisms → Viruses → Predicted Viral	3602
3300006336|Ga0068502_1316842	Not Available	568
3300006339|Ga0068481_1155139	All Organisms → Viruses → Predicted Viral	1166
3300006339|Ga0068481_1489346	Not Available	1144
3300006339|Ga0068481_1512306	Not Available	871
3300006900|Ga0066376_10053796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2579
3300006902|Ga0066372_10023105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2872
3300006902|Ga0066372_10143574	Not Available	1271
3300006902|Ga0066372_10163217	Not Available	1199
3300006902|Ga0066372_10632896	Not Available	639
3300006902|Ga0066372_10710503	Not Available	605
3300006902|Ga0066372_10896624	Not Available	540
3300006988|Ga0098064_126423	Not Available	794
3300007291|Ga0066367_1164020	Not Available	842
3300007504|Ga0104999_1022065	All Organisms → Viruses → Predicted Viral	3672
3300007508|Ga0105011_1027209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3079
3300007509|Ga0105012_1121200	Not Available	1038
3300007758|Ga0105668_1209145	Not Available	923
3300009619|Ga0105236_1054207	Not Available	538
3300017775|Ga0181432_1041236	Not Available	1269
3300017775|Ga0181432_1311741	Not Available	500
3300020398|Ga0211637_10257725	Not Available	693
3300020399|Ga0211623_10086461	Not Available	1075
3300020427|Ga0211603_10313517	Not Available	600
3300021442|Ga0206685_10214964	Not Available	648
3300021443|Ga0206681_10002242	All Organisms → cellular organisms → Bacteria	8318
3300025052|Ga0207906_1035741	Not Available	679
3300025052|Ga0207906_1051606	Not Available	549
3300025061|Ga0208300_132596	Not Available	551
3300025069|Ga0207887_1022740	Not Available	994
3300025112|Ga0209349_1128798	Not Available	698
3300025125|Ga0209644_1034104	Not Available	1139
3300025873|Ga0209757_10191197	Not Available	647
3300025873|Ga0209757_10280329	Not Available	530
3300025873|Ga0209757_10312269	Not Available	501
3300028190|Ga0257108_1126790	Not Available	748
3300028192|Ga0257107_1004754	All Organisms → Viruses → Predicted Viral	4671
3300028192|Ga0257107_1018582	All Organisms → Viruses → Predicted Viral	2233
3300028487|Ga0257109_1163558	Not Available	646
3300028488|Ga0257113_1009688	All Organisms → Viruses → Predicted Viral	3253
3300028488|Ga0257113_1038064	Not Available	1574
3300028535|Ga0257111_1018029	Not Available	2482
3300028535|Ga0257111_1019330	All Organisms → Viruses → Predicted Viral	2383
3300028535|Ga0257111_1051623	All Organisms → cellular organisms → Bacteria	1355
3300031606|Ga0302119_10303323	Not Available	595
3300031801|Ga0310121_10033276	All Organisms → Viruses → Predicted Viral	3597
3300031801|Ga0310121_10059878	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2533
3300031801|Ga0310121_10118802	Not Available	1675
3300031801|Ga0310121_10154891	Not Available	1425
3300031801|Ga0310121_10168426	Not Available	1353
3300031801|Ga0310121_10184761	All Organisms → Viruses → Predicted Viral	1278
3300031801|Ga0310121_10193449	Not Available	1242
3300031801|Ga0310121_10210102	Not Available	1179
3300031801|Ga0310121_10679841	Not Available	548
3300031803|Ga0310120_10326863	Not Available	802
3300031811|Ga0310125_10093470	Not Available	1586
3300031811|Ga0310125_10573986	Not Available	529
3300031861|Ga0315319_10628826	Not Available	529
3300031886|Ga0315318_10316541	Not Available	895
3300032048|Ga0315329_10162667	Not Available	1163
3300032278|Ga0310345_10062162	All Organisms → cellular organisms → Bacteria	3196
3300032278|Ga0310345_10105469	All Organisms → Viruses → Predicted Viral	2470
3300032278|Ga0310345_10117797	All Organisms → Viruses → Predicted Viral	2342
3300032278|Ga0310345_10179157	All Organisms → Viruses → Predicted Viral	1910
3300032278|Ga0310345_10191562	Not Available	1849
3300032278|Ga0310345_10353483	Not Available	1375
3300032278|Ga0310345_10572649	Not Available	1085
3300032278|Ga0310345_10597142	Not Available	1062
3300032278|Ga0310345_10609159	Not Available	1052
3300032278|Ga0310345_10874065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	876
3300032278|Ga0310345_12086946	Not Available	550
3300032360|Ga0315334_10303607	Not Available	1329
3300032820|Ga0310342_100590462	Not Available	1256
3300032820|Ga0310342_101588927	Not Available	779
3300032820|Ga0310342_101899289	Not Available	712
3300034695|Ga0372840_008366	All Organisms → Viruses → Predicted Viral	2787
3300034695|Ga0372840_085156	Not Available	940

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	85.15%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.94%
Coastal	Environmental → Aquatic → Marine → Coastal	2.97%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.97%
Strait	Environmental → Aquatic → Marine → Strait	1.98%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.99%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	59.41%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	21.78%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.94%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.98%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.99%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	21.78%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	20.79%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	20.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	15.84%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	5.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.97%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.98%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.98%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.99%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.99%
Water Column	Environmental → Aquatic → Marine → Coastal → Unclassified → Water Column	0.99%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.99%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000142	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500m	Environmental
3300000179	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 500m	Environmental
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental
3300003539	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNA	Environmental
3300006011	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV	Environmental
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental
3300006988	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl	Environmental
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental
3300007504	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate a	Environmental
3300007508	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate a	Environmental
3300007509	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate b	Environmental
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental
3300009619	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental
3300020427	Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)	Environmental
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental
3300025061	Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZ (SPAdes)	Environmental
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug09P16500mDRAFT_10278712	3300000142	Marine	LSSFIFRAAGFSEIVRLLKETNQRLKNLERLLEFTLSPPDLAQYKKGMSLEDIPRKKLNDQA*
LPaug09P16500mDRAFT_10368972	3300000142	Marine	LSSFIFRAAGFSEIIKLLKETNERLSNLERLLEFTLSPPDLVSYKKGMSLDDVPRRKLSGQA*
LPaug09P16500mDRAFT_10525992	3300000142	Marine	LSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMGLDDIPRMKLSEAGNPSDQV*
LPjun09P16500mDRAFT_10400592	3300000179	Marine	LSSFIFRAAGFSEIVRLLKETNQRLKNLERLLEFTLSPPDLAQYKKGMSLEDIPR
JGI25131J35506_10058663	3300002511	Marine	LSSFIFRAAGFSEIVSLLKETNQRLKNLERLLEFTLSPPDLSKYKKGMSLDDIPRMKLSEAGNPSDQA*
JGI25136J39404_10113771	3300002760	Marine	MVSSFIFRAAGFSEIVSLLKETNQRLKNLERLLEFTLSPPDLSKYKKGMSLDDIPRKKLSEAGTPSDQA*
FS891DNA_102481822	3300003539	Diffuse Hydrothermal Flow Volcanic Vent	LSSFIFRAAGFQEIVKLLKETNESLKNVERLLEFTLSPPDLAKYKKGMSLDDIPRKKLSEAGNPSDQA*
Ga0066373_100410982	3300006011	Marine	LSSFIFRAAGFNEIIKLLRETNKSLKNVERLLEFTLSPPDLAKYKKGMSLDDIPRMKLSEAGNPSDLG*
Ga0068470_10927208	3300006308	Marine	LSSFIFRAAGFNEIVRLLKETNTKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA*
Ga0068470_11170222	3300006308	Marine	LSSFIFRAAGFNEIIELLKETNIRLATLERLLEFTLSPPDLVNYKKGMSLDDIPRKKFNDLGD*
Ga0068470_11947153	3300006308	Marine	LSSFIFRAAGFNEIVRLLKETNQRLSNMERLLEFLLSPPDLKKYKKGMSFDNLPRKPFSDQA*
Ga0068470_15850961	3300006308	Marine	MVSSFIFRAAGFNEIINLLKETNTKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA*
Ga0068471_10648995	3300006310	Marine	LSSFIFRAAGFSEIVRLLTETNQRLSNMERLLEFLLSPPDLKKYKKGQSFDDLPRKPFSDQA*
Ga0068471_10990015	3300006310	Marine	LSSFIFRAAGFNEIVRLLKETNEKLGNIERLMEFLLSPPDLKKYKKGMSFNNLPRKPFSDQA*
Ga0068471_11540727	3300006310	Marine	LSSFIFRAAGFNEIVRLLKETNTRLGNIEKLMEFLLSPPDLKKYKKGVSFDDLPRKPFSDQA*
Ga0068471_116314712	3300006310	Marine	LSSFIFRAAGFSEIISLLKETNKSLKNLERLLEFTLSPPDLVKYKKGMSLDGMPRKKLSDRT*
Ga0068471_14324015	3300006310	Marine	LSSFIFRAAGFNEIVNLLKETNTKLSNIEKLMEFLLSPPDLAKYKKGMRFDDVPRKSFS*
Ga0068471_15640542	3300006310	Marine	LSSFIFRAAGFSEIINLLKETNVKLGNIEKLMEFLLSPPDLAKYKKGMRFDDVPRKSFSDQS*
Ga0068471_15664693	3300006310	Marine	LSSFIFRAAGFSEIIKLLKETNKRLGNMETLLEFLLSPPDLKKYKKGLRFDDIPRKSFSDQA*
Ga0068497_10995026	3300006323	Marine	FIFRAAGFNEIVRLLKETNTKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA*
Ga0068476_10812136	3300006324	Marine	LSSFIFRAAGFNEIVRLLKETNQRLSNMERLLEFLLSPPDLKKYKKGMSFDDLPRKPFSDQA*
Ga0068501_12464312	3300006325	Marine	MI*QTIG*TYLSSFIFRAAGFSEIINLLKETNTKLGNIEKLMEFLLSPPDLKKYKKGLRFDDLPRKSFSDQA*
Ga0068480_14427771	3300006335	Marine	AAGFNEIISLLKETNKSLKNVERLLEFTLSPPDLSKYKEGMSLDDIPRKKLSEAGNPSDQA*
Ga0068502_11738963	3300006336	Marine	LSSFIFRAAGFNEIVNLLKETNKKLGNIEKLMEFLLSPPDLAKYKKGMRFDDVPRKSFS*
Ga0068502_11865775	3300006336	Marine	LSSFIFRAAGFSEIVRLLKETNQRLSNMERLLEFLLSPPDLKKYKKGMSFDNLPRKPFSDQA*
Ga0068502_13168422	3300006336	Marine	LSSFIFRAAGVSEIISLLKETNKSLKNLERLLEFTLSPPDLVKYKKGMSLDGIPRKKLSDRT*
Ga0068481_11551393	3300006339	Marine	LSSFIFRAAGFNEIVNLLKETNKKLGNIEKLMEFLLSPPDLVQYKKGLRFDDIPRKSFSDQA*
Ga0068481_14893464	3300006339	Marine	LSSFIFRAAGFNEIINLLKETNQRLKNLERLLEFTLSPPDLSKYKEGMSLDDIPRMKLSEAGNPSDQA*
Ga0068481_15123063	3300006339	Marine	LSSFIFRAAGFSEIISLLKETNKSLKNLERLLEFTLSPPDLVKYKKGMSLDGIPRKKLSDRT*
Ga0066376_100537962	3300006900	Marine	LSSFIFRAAGFTEIVNLLKETNVKLGNIEKLMEFLLSPPDLKKYKKGLRFDDLPRKSFSDQA*
Ga0066372_100231056	3300006902	Marine	LSSFIFRAAGFQEIVSLLKETNQRLKNLERLLEFTLSPPDLAKYKKGMSLDDIPRKKLSDQA*
Ga0066372_101435743	3300006902	Marine	MVSSFIFRAAGFNEIIELLKETNKSLKNVERLLEFTLSPPDLSKYKEGMSLDDIPRMKLSEAGNPSDQA*
Ga0066372_101632172	3300006902	Marine	LSSFIFRAAGFSEIISLLKETNERLKNLERLLEFTLSPPDLAKYKKGMSLDDIPRMKLSKAGNPSDQS*
Ga0066372_106328962	3300006902	Marine	LSSFIFRAAGFNEIITLLKETNLRLKNLERLLEFTLSPPDLHKYKEGMSLDDIPRRKLNDQD*
Ga0066372_107105032	3300006902	Marine	LSSFIFRAAGFNEIISLLKETNKRLKNLERLLEFTLSPPDLAKYKKGMSLDDIPRKKLS
Ga0066372_108966242	3300006902	Marine	LSSFIFRAAGFSEIIKLLKETNERLSNLERLLEFTLSPPDLVNYKKGMSLDEIP
Ga0098064_1264232	3300006988	Marine	LSSFIFRAAGFDEIISLLKETNKSLKSIERLLEFTLSPPDLAKYKKGMSLDDIPRMKLSEAGNPSDQS*
Ga0066367_11640202	3300007291	Marine	LSSFIFRAAGFNEIINLLKETNVKLGNIERLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA*
Ga0104999_10220655	3300007504	Water Column	LSSFIFRAAGFNEIIKLLRETNKSLKSIERLLEFTLSPPDLAKYKKGMSLDDIPRMKLSEAGNPSDQS*
Ga0105011_10272092	3300007508	Marine	LSSFIFRAAGFDEIISLLKETNKRLKNLERLLEFTLSPPDLAKYKKGMSLDDIPRKKISDLD*
Ga0105012_11212001	3300007509	Marine	MVSSFIFRAAGFNEIIELLKETNVRLKNLEVLLEFTLSPPDLAKYKKGMKLDDVPRKKINHQD*
Ga0105668_12091452	3300007758	Background Seawater	LSSFIFRAAGFSEIISLLKETNQRLKNLERLLEFTLSPPDLSKYKQGMSLDDIPRMKLSKAGNPSDQA*
Ga0105236_10542072	3300009619	Marine Oceanic	LSSFIFRAAGFNEIIKLLKETNTTLGNIEKLMEFLLSPPDLKKYKKGLRFDDIPRKSFSDQA*
Ga0181432_10412363	3300017775	Seawater	LSSFIFRAAGFQEIVSLLKETNQRLKNLERLLEFTLSPPDLSKYKEGMSLDDIPRMKLSEAGNPSDQA
Ga0181432_13117412	3300017775	Seawater	FIFRAAGFSEIINLLKETNVKLGNIEKLMEFLLSPPDLAKYKKGMRFDDVPRKSFSDQS
Ga0211637_102577251	3300020398	Marine	AGFNEIINLLKETNTKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA
Ga0211623_100864611	3300020399	Marine	LSSFIFRAAGFNEIVNLLKETNTKLSNIEKLMEFLLSPPDLAKYKKGMRFDDVPRKSFS
Ga0211603_103135172	3300020427	Marine	LSSFIFRAAGFNEIVRLLKETNTKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA
Ga0206685_102149642	3300021442	Seawater	LSSFIFRAAGFNEIIELLKETNIRLATLERLLEFTLSPPDLVNYKKGMSLDDIPRKKFNDLGD
Ga0206681_1000224210	3300021443	Seawater	LSSFIFRAAGFSEIINLLKETNKSLKNVERLLEFTLSPPDLSKYKAGMSLDDIPRKKLSEAGNPSDLG
Ga0207906_10357412	3300025052	Marine	MIXHMIGXTYLSSFIFRAAGFSEIVRLLKETNQRLKNLERLLEFTLSPPDLAQYKKGMKLDDIPRKPFSDQA
Ga0207906_10516062	3300025052	Marine	LSSFIFRAAGFSEIIELLKETNVRLKNLEVLLEFTLSPPDLAKYKKGMKFEDIPRKNIKHQD
Ga0208300_1325961	3300025061	Marine	YLSSFIFRAAGFNEIIKLLRETNKSLKSIERLLEFTLSPPDLAKYKKGMSLDDIPRMKLSEAGNPSDQS
Ga0207887_10227402	3300025069	Marine	MVSSFIFRAAGFNEIVDLLKKTNQSLKNVERLLEFTLSPPDLSKYKKGMSLDDIPRKKLSEAGNPSDQA
Ga0209349_11287982	3300025112	Marine	LSSFIFRAAGFNEIIELLKETNVRLKNLEILLEFTLSPPDLAKYKKGMNFEDIPRKNIKHQD
Ga0209644_10341041	3300025125	Marine	LSSFIFRAAGFSEIVSLLKETNQRLKNLERLLEFTLSPPDLSKYKQGMSLDDIPRKKLSEAGTPSDQA
Ga0209757_101911973	3300025873	Marine	LSSFIFRAAGFNEIIELLKQTNVRLRNLERLLEFTLSPPDLANYKKGMSLDEIPRKKISDLGD
Ga0209757_102803292	3300025873	Marine	MVSSFIFRAAGFSEIVSLLKETNQRLKNLERLLEFTLSPPDLSKYKKGMSLDDIPRKKLSEAGTPSDQA
Ga0209757_103122692	3300025873	Marine	MVSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMSLDDIPRKKLSEAGNPSDQV
Ga0257108_11267902	3300028190	Marine	MVSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMSLDDIPRKKLSEAGNPSDQA
Ga0257107_100475410	3300028192	Marine	LSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMGLDDIPRMKLSE
Ga0257107_10185822	3300028192	Marine	LSSFIFRAAGFSEIVSLLKETNQRLKNLERLLEFTLSPPDLSKYKKGMGLDDIPRKKLSEAGNPSDQA
Ga0257109_11635581	3300028487	Marine	MIDXIYLSSFIFRAAGFNEIIDLLKETNVRLKNLERLLEFTLSPPDLKKYKKGLRFDDIPRKKLNDQA
Ga0257113_10096885	3300028488	Marine	LSSFIFRAAGFQEIVRLLTETNKRLSNMERLLEFLLSPPDLKKYKKGMSFDNLPRKPFSDQA
Ga0257113_10380642	3300028488	Marine	MVSSFIFRAAGFNEIIDLLKETNQSLKNVERLLEFTLSPPDLSKYKKGMSLDDIPRKKLSEAGNPSDQA
Ga0257111_10180294	3300028535	Marine	LSSFIFRAAGFSEIIKLLKETNERLSNLERLLEFTLSPPDLVSYKKGMSLDDVPRRKLSGQA
Ga0257111_10193305	3300028535	Marine	LSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMGLDDIPRMKLSEAGNPSDQV
Ga0257111_10516235	3300028535	Marine	MVSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKQGMGLDDIPRKKLSEAG
Ga0302119_103033232	3300031606	Marine	LSSFIFRAAGFSEIIELLKETNVRLKNLEVLLEFTLSPPDLARYKKGMKFESIPRKNIKHQD
Ga0310121_100332766	3300031801	Marine	LSSFIFRAAGFSEIVRLLTETNKRLSNMERLLEFLLSPPDLKKYKKGMSFDSLPRKPFSDQA
Ga0310121_100598785	3300031801	Marine	LSSFIFRAAGFNEIVRLLKETNVKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKSFSDQA
Ga0310121_101188023	3300031801	Marine	LSSFIFRAAGFNEIINILKETNVKLGNIEKLMEFLLSPPDLVKYKKGMKFDDVPRKSFSDRA
Ga0310121_101548913	3300031801	Marine	LSSFIFRAAGFSEIVRLLTETNKRLSNMERLLEFLLSPPDLKKYKKGMSFDGLPRKPFSDQA
Ga0310121_101684262	3300031801	Marine	LSSFIFRAAGFSEIINLLKETNVKLGNIEKLMEFLLSPPDLAKYKKGMRFDDVPRKSFSDQS
Ga0310121_101847611	3300031801	Marine	LSSFIFRAAGFSEIINLLKETNVKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLP
Ga0310121_101934491	3300031801	Marine	LSSFIFRAAGFSEIINLLKETNVKLGNIEKLMEFLLSPPDLAKYKKGMKFDDVPRKS
Ga0310121_102101022	3300031801	Marine	LSSFIFRAAGFSEIVRLLTETNQRLSNMERLLEFLLSPPDLKKYKKGLSFDDLPRKPFSDQA
Ga0310121_106798412	3300031801	Marine	LSSFIFRAAGFTEIVKLLKETNTRLSNLERLLEFTLSPPDLASYKKGMSLDDVPRRKLNDRA
Ga0310120_103268633	3300031803	Marine	LSSFIFRAAGFSEIINLLKETNVKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKSF
Ga0310125_100934705	3300031811	Marine	LSSFIFRAAGFNEIINLLKETNVKLGNIEKLMEFLLSPPDLKQYKKGMSFNDLPRKSFSDQA
Ga0310125_105739862	3300031811	Marine	LSSFIFRAAGFSEIINLLKETNVKLGNIEKLMEFLLSPPDLAKYKKGMRF
Ga0315319_106288262	3300031861	Seawater	MIXHMIGXIYLSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMGLDDIPRMKLSEAGNPSDQV
Ga0315318_103165412	3300031886	Seawater	LSSFIFRAAGFSEIVRLLTETNQRLSNMERLLEFLLSPPDLKKYKKGQSFDDLPRKPFSDQA
Ga0315329_101626673	3300032048	Seawater	LSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMGLDDIPRMKLSEAGNPSDQA
Ga0310345_100621626	3300032278	Seawater	MVSSFIFRAAGFNEIIELLKETNTKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA
Ga0310345_101054695	3300032278	Seawater	LSSFIFRAAGFSEIISLLKETNKSLKNLERLLEFTLSPPDLVKYKKGMSLDGIPRKKLSDRT
Ga0310345_101177975	3300032278	Seawater	LSSFIFRAAGFNEIVNLLKETNKKLGNIEKLMEFLLSPPDLVQYKKGLRFDDIPRKSFSDQA
Ga0310345_101791575	3300032278	Seawater	LSSFIFRAAGFNEIINLLKETNTKLGNMEKLLEFLLSPPDLKKYKKGLRFDDIPRKSFSDQA
Ga0310345_101915623	3300032278	Seawater	LSSFIFRAAGFNEIVRLLKETNQRLSNMERLLEFLLSPPDLKKYKKGMSFDNLPRKPFSDQA
Ga0310345_103534832	3300032278	Seawater	LSSFIFRAAGFNEIIELLKETNIRLRNLERLLEFTLSPPDLANYKKGMSLDEIPRKKISDLDG
Ga0310345_105726493	3300032278	Seawater	LSSFIFRAAGFSEIIKLLKETNERLSNLERLLEFTLSPPDLASYKKGMSLDDVPRRKLNDQA
Ga0310345_105971422	3300032278	Seawater	LSSFIFRAAGFNEIVRLLKETNEKLGNIERLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA
Ga0310345_106091593	3300032278	Seawater	LSSFIFRAAGFNEIINLLKETNTKLGNIEKLMEFLLSPPDLKKYKKGMSFNDLPRKPFSDQA
Ga0310345_108740652	3300032278	Seawater	LSSFIFRAAGFNEIINLLKETNVRLKNLERLLEFTLSPPDLAKYKEEMSFDDIPRRKLNDQD
Ga0310345_120869462	3300032278	Seawater	LSSFIFRAAGFNEIIKLLKETNKKLSNIETLMEFLLSPPDLVQYKKGMRFDDVPRKSFSDQS
Ga0315334_103036072	3300032360	Seawater	MVSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMGLDDIPRMKLSEAGNPSDQA
Ga0310342_1005904624	3300032820	Seawater	LSSFIFRAAGFSEIINLLKETNQRLKNLERLLEFTLSPPDLSKYKEGMSLDDIPRMKLSKAGNPSDQA
Ga0310342_1015889271	3300032820	Seawater	LSSFIFRAAGFSEIISLLKETNKRLANMETLLEFLLSPPDLAKYKKGIGFDDLPRRKFSDQD
Ga0310342_1018992893	3300032820	Seawater	LSSFIFRAAGFQEIVKLLKETNQRLKNLERLLEFTLSPPDLAKYKKGMSLDDIPRMKLSEAGTPSDQA
Ga0372840_008366_26_235	3300034695	Seawater	MVSSFIFRAAGFNEIIELLKETNQSLKNVERLLEFTLSPPDLSKYKKGMGLDDIPRMKLSEAGNPSDQV
Ga0372840_085156_683_871	3300034695	Seawater	MSSFIFRAAGFSEIIKLLKETNERLSNLERLLEFTLSPPDLVSYKKGMSLDDVPRRKLSGQA