Metagenome / Metatranscriptome Family F103390

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103390
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	44 residues
Representative Sequence	AFERKFLQAENELVQINKLTESPKNDTVRKYMTMNDKIAEGMVA
Number of Associated Samples	91
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	94.06 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (43.564 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (26.733 % of family members)
Environment Ontology (ENVO)	Unclassified (69.307 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (79.208 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF07486	Hydrolase_2	2.97
PF05426	Alginate_lyase	0.99
PF01068	DNA_ligase_A_M	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	2.97
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.99
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.41 %
Unclassified	root	N/A	40.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	44.55 %
Unclassified	root	N/A	40.59 %
Viruses	superkingdom	All Organisms → Viruses	14.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.56 %
Unclassified	root	N/A	40.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.96 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.96 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.59 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	39.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.59 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	39.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.59 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	39.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.59 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	39.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	3.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.59 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	39.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	3.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.59 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	39.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.85 %
Crocinitomicaceae bacterium TMED45	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	3.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001460\|JGI24003J15210_10161667	Not Available	561	Open in IMG/M
3300001472\|JGI24004J15324_10079283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	894	Open in IMG/M
3300001472\|JGI24004J15324_10107119	Not Available	707	Open in IMG/M
3300002482\|JGI25127J35165_1037224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1092	Open in IMG/M
3300004110\|Ga0008648_10098611	Not Available	815	Open in IMG/M
3300005912\|Ga0075109_1035585	Not Available	1939	Open in IMG/M
3300006334\|Ga0099675_1541534	Not Available	543	Open in IMG/M
3300009420\|Ga0114994_10216989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1285	Open in IMG/M
3300009433\|Ga0115545_1047779	All Organisms → Viruses → Predicted Viral	1656	Open in IMG/M
3300009433\|Ga0115545_1293048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	541	Open in IMG/M
3300009440\|Ga0115561_1265875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	638	Open in IMG/M
3300009442\|Ga0115563_1114998	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300009505\|Ga0115564_10142653	All Organisms → Viruses → Predicted Viral	1293	Open in IMG/M
3300009550\|Ga0115013_11108624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	570	Open in IMG/M
3300009608\|Ga0115100_10884505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	536	Open in IMG/M
3300009706\|Ga0115002_10081676	All Organisms → Viruses → Predicted Viral	2690	Open in IMG/M
3300009706\|Ga0115002_10849568	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	634	Open in IMG/M
3300009706\|Ga0115002_10957247	Not Available	589	Open in IMG/M
3300012525\|Ga0129353_1358434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	634	Open in IMG/M
3300012936\|Ga0163109_10983120	Not Available	616	Open in IMG/M
3300012952\|Ga0163180_11432690	Not Available	574	Open in IMG/M
3300012953\|Ga0163179_10637887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	898	Open in IMG/M
3300012953\|Ga0163179_11260699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	656	Open in IMG/M
3300012953\|Ga0163179_12222355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	507	Open in IMG/M
3300016745\|Ga0182093_1622758	Not Available	953	Open in IMG/M
3300016754\|Ga0182072_1195769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	634	Open in IMG/M
3300017717\|Ga0181404_1088676	Not Available	762	Open in IMG/M
3300017719\|Ga0181390_1027952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1787	Open in IMG/M
3300017724\|Ga0181388_1133526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	591	Open in IMG/M
3300017725\|Ga0181398_1022092	All Organisms → Viruses → Predicted Viral	1582	Open in IMG/M
3300017727\|Ga0181401_1037302	All Organisms → Viruses → Predicted Viral	1372	Open in IMG/M
3300017734\|Ga0187222_1027894	Not Available	1353	Open in IMG/M
3300017738\|Ga0181428_1158427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	529	Open in IMG/M
3300017757\|Ga0181420_1139314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	728	Open in IMG/M
3300017758\|Ga0181409_1017951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2302	Open in IMG/M
3300017759\|Ga0181414_1060596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1008	Open in IMG/M
3300017760\|Ga0181408_1051493	Not Available	1100	Open in IMG/M
3300017776\|Ga0181394_1272165	Not Available	504	Open in IMG/M
3300017783\|Ga0181379_1286412	Not Available	562	Open in IMG/M
3300018428\|Ga0181568_11309440	Not Available	540	Open in IMG/M
3300019274\|Ga0182073_1301150	Not Available	880	Open in IMG/M
3300020165\|Ga0206125_10360253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	534	Open in IMG/M
3300020168\|Ga0181588_10379769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	545	Open in IMG/M
3300020175\|Ga0206124_10313957	Not Available	596	Open in IMG/M
3300020259\|Ga0211633_1059178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	629	Open in IMG/M
3300020314\|Ga0211522_1064143	Not Available	621	Open in IMG/M
3300020336\|Ga0211510_1124690	Not Available	581	Open in IMG/M
3300020346\|Ga0211607_1048248	Not Available	884	Open in IMG/M
3300020351\|Ga0211601_1156395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	505	Open in IMG/M
3300020400\|Ga0211636_10111563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1100	Open in IMG/M
3300020413\|Ga0211516_10285032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	744	Open in IMG/M
3300020421\|Ga0211653_10407821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	585	Open in IMG/M
3300020424\|Ga0211620_10196462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	864	Open in IMG/M
3300020430\|Ga0211622_10296007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	693	Open in IMG/M
3300020472\|Ga0211579_10398543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	780	Open in IMG/M
3300020475\|Ga0211541_10579785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	546	Open in IMG/M
3300021425\|Ga0213866_10462309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	610	Open in IMG/M
3300021958\|Ga0222718_10270654	Not Available	894	Open in IMG/M
3300021958\|Ga0222718_10303917	Not Available	827	Open in IMG/M
3300021961\|Ga0222714_10384153	Not Available	746	Open in IMG/M
3300021964\|Ga0222719_10375809	Not Available	892	Open in IMG/M
3300022885\|Ga0222662_1014816	Not Available	1918	Open in IMG/M
3300022926\|Ga0255753_1148836	Not Available	1058	Open in IMG/M
3300022928\|Ga0255758_10436599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	510	Open in IMG/M
3300023110\|Ga0255743_10431136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	643	Open in IMG/M
3300023176\|Ga0255772_10133979	All Organisms → Viruses → Predicted Viral	1499	Open in IMG/M
3300025098\|Ga0208434_1032379	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300025138\|Ga0209634_1190070	Not Available	796	Open in IMG/M
3300025168\|Ga0209337_1342192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	517	Open in IMG/M
3300025590\|Ga0209195_1030175	All Organisms → Viruses → Predicted Viral	1551	Open in IMG/M
3300025623\|Ga0209041_1072092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	992	Open in IMG/M
3300025685\|Ga0209095_1155753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	662	Open in IMG/M
3300025809\|Ga0209199_1018646	All Organisms → Viruses → Predicted Viral	4444	Open in IMG/M
3300025809\|Ga0209199_1299197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	501	Open in IMG/M
3300025849\|Ga0209603_1095081	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	1349	Open in IMG/M
3300025892\|Ga0209630_10051394	All Organisms → Viruses → Predicted Viral	2462	Open in IMG/M
3300026182\|Ga0208275_1045200	Not Available	888	Open in IMG/M
3300026257\|Ga0208407_1122472	Not Available	807	Open in IMG/M
3300027779\|Ga0209709_10059860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2152	Open in IMG/M
3300027780\|Ga0209502_10101210	All Organisms → Viruses → Predicted Viral	1462	Open in IMG/M
3300027788\|Ga0209711_10160582	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
3300027844\|Ga0209501_10297174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	994	Open in IMG/M
3300031143\|Ga0308025_1159396	Not Available	794	Open in IMG/M
3300031519\|Ga0307488_10235973	All Organisms → Viruses → Predicted Viral	1214	Open in IMG/M
3300031519\|Ga0307488_10269062	Not Available	1113	Open in IMG/M
3300031579\|Ga0308134_1143307	Not Available	548	Open in IMG/M
3300031588\|Ga0302137_1269859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	564	Open in IMG/M
3300031594\|Ga0302131_1120625	Not Available	902	Open in IMG/M
3300031597\|Ga0302116_1153720	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	711	Open in IMG/M
3300031597\|Ga0302116_1160640	Not Available	690	Open in IMG/M
3300031599\|Ga0308007_10131875	Not Available	902	Open in IMG/M
3300031606\|Ga0302119_10277634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	630	Open in IMG/M
3300031622\|Ga0302126_10209288	Not Available	691	Open in IMG/M
3300031627\|Ga0302118_10349638	Not Available	673	Open in IMG/M
3300031630\|Ga0308004_10386760	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	521	Open in IMG/M
3300031775\|Ga0315326_10424007	Not Available	862	Open in IMG/M
3300031886\|Ga0315318_10811259	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	521	Open in IMG/M
3300032011\|Ga0315316_10350061	All Organisms → Viruses → Predicted Viral	1240	Open in IMG/M
3300032047\|Ga0315330_10084384	Not Available	2107	Open in IMG/M
3300032151\|Ga0302127_10228562	Not Available	803	Open in IMG/M
3300033742\|Ga0314858_155860	Not Available	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.02%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.98%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	32.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.80%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.85%
Strait	Environmental → Aquatic → Marine → Strait	12.87%
Pelagic	Environmental → Aquatic → Marine → Pelagic	11.88%
Coastal	Environmental → Aquatic → Marine → Coastal	4.95%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.98%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	30.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.80%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	11.88%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	8.91%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.95%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.98%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	26.73%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.87%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	12.87%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	9.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	8.91%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.96%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.96%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.97%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.98%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.98%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.99%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.99%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.99%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.99%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.99%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.99%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.99%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300004110	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA	Environmental	Open in IMG/M
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009608	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300012525	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016754	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019274	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020168	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020259	Marine microbial communities from Tara Oceans - TARA_B100000482 (ERX556041-ERR599103)	Environmental	Open in IMG/M
3300020314	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556135-ERR598974)	Environmental	Open in IMG/M
3300020336	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)	Environmental	Open in IMG/M
3300020346	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556057-ERR599069)	Environmental	Open in IMG/M
3300020351	Marine microbial communities from Tara Oceans - TARA_B100000676 (ERX555955-ERR599089)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020424	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022885	Saline water microbial communities from Ace Lake, Antarctica - #600	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300023110	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025590	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)	Environmental	Open in IMG/M
3300025623	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025685	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300026182	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49B (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031579	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1120_Surface (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031597	Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCM	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M
3300032151	Marine microbial communities from Western Arctic Ocean, Canada - CB4_SCM	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24003J15210_101616673	3300001460	Marine	RKFLQAENELVQINKLEESPKNDDVRSYMTMNDKIAEGMVA*
JGI24004J15324_100792836	3300001472	Marine	TETVASERKFLQLEDELVQINKLTECPKNDDVRAYMIMNEKLRQGLTQEGQ*
JGI24004J15324_101071193	3300001472	Marine	RITETVASERKFLQLEDELVQINKLTECPKNDDVRAYMIMNEKLRQGLTQEGQ*
JGI25127J35165_10372243	3300002482	Marine	YDRRIQESIAFERKFLQAENELVQINKLAECPKNETVRQYMTMNEKLKEGMVA*
Ga0008648_100986113	3300004110	Marine	TIAFERKFLQAENELVQINKLTESPKNDTVRKYMKMNEKLAEGMVA*
Ga0075109_10355858	3300005912	Saline Lake	SFLQAETELVSINNLTECPANDTVRTFMKMNEKLAEGMVA*
Ga0099675_15415341	3300006334	Marine	IARERKFLEAESELVAINKLTESPKNDDVRKYMKMNEQIQQGLEA*
Ga0114994_102169891	3300009420	Marine	QAETELVAINKLDESPANDTVRTYMKMNEKLAEGMVA*
Ga0115545_10477797	3300009433	Pelagic Marine	ERKFLQAENELVQINKLTECPKNDTVRKYMAMNDMIAEGLVA*
Ga0115545_12930483	3300009433	Pelagic Marine	AFERKFLQAENELVQINKLTECPKNDDVRSYMKMNDKIAEGLVA*
Ga0115561_12658751	3300009440	Pelagic Marine	RIKETIAFERKFLQAEKELVTINRLTECPKNDTVRKYMTMNDKIAEGMVA*
Ga0115563_11149984	3300009442	Pelagic Marine	LQAENELVQINKLTECPKNDDVRSYMKMNDKIAEGMVA*
Ga0115564_101426531	3300009505	Pelagic Marine	TETIAFERKFLQAESELVTINRLEQSPKNDDVRSYMRMNDKIAEGMAS*
Ga0115013_111086243	3300009550	Marine	NELVQINKLTECPKNDTVRKYMTMNDKIAEGMVA*
Ga0115100_108845053	3300009608	Marine	ESIAFERKFLQAENELVQINKLTESPKNDTVRKYMAMNDKIAEGLVA*
Ga0115002_100816767	3300009706	Marine	AFERKFLQAETELVSINRLEQSPKNDDVRTYMRMNEKLTEGMVA*
Ga0115002_108495683	3300009706	Marine	FERKFLQAETELVSINRLEQSPKNDDVRTYMRMNDKIAEGMVA*
Ga0115002_109572471	3300009706	Marine	RKFLQAETELVSINKLEESPKNDDVRSYMRMNDKIAEGLVA*
Ga0129353_13584343	3300012525	Aqueous	ERKFLQAENELVMINRLTECPKNDTVRAYMKMNEKLAEGMVA*
Ga0163109_109831201	3300012936	Surface Seawater	TELVTINRLTECPKNDTVRKYMKMNDKLAEGMVA*
Ga0163180_114326902	3300012952	Seawater	IASERKFLQAETELVTINRLTECPKNDTVRQYMKMNDKLKEGMVA*
Ga0163179_106378873	3300012953	Seawater	IAFERKFLQAENELVQINKLTESPKNDTVRKYMTMNDKIAEGMVA*
Ga0163179_112606994	3300012953	Seawater	LRRIKETIAFERKFLQAENELVQINKLTECPKNDTVRKYMAMNDKIAERLVA*
Ga0163179_122223552	3300012953	Seawater	RRIKETIAFERKFLQAENELVQINKLTESPKNDTVRKYMTMNDKIAEGMVA*
Ga0182093_16227581	3300016745	Salt Marsh	TDFDRKFLQAEQELITINRLTECPKNDTVRAYMKMNEKLAEGMVA
Ga0182072_11957694	3300016754	Salt Marsh	AEQELITINRLTECPKNDTVRAYMKMNEKLAEGMVA
Ga0181404_10886761	3300017717	Seawater	RRIKETVAFERKFLQAENELVQINKLEESPKNDTVRAYMRMNDKLKEGMVA
Ga0181390_10279526	3300017719	Seawater	EYLRRIKETVAFERKFLQAENELVQINKLAECPKNDTVRKYMAMNDKIAEGLVA
Ga0181388_11335261	3300017724	Seawater	FLQAETELVTINRLTECPKNDTVRKYMTMNDKIAEGMVA
Ga0181398_10220921	3300017725	Seawater	KETVAFERKFLQAENELVQINKLEESPKNDTVRAYMKMNDKLKEGMVA
Ga0181401_10373024	3300017727	Seawater	FLQAENELVQINKLEESPKNDTVRAYMRMNQKLKEGMVA
Ga0187222_10278941	3300017734	Seawater	IAFERKFLQAENELVQINKLTESPKNDTVRKYMAMNDKLKEGMVA
Ga0181428_11584273	3300017738	Seawater	AFERKFLQAENELVQINKLTESPKNDTVRKYMTMNDKIAEGMVA
Ga0181420_11393141	3300017757	Seawater	RIKESIAFERKFLQAENELVQINKLTESPKNDTVRKYMAMNDKIAEGLVA
Ga0181409_10179518	3300017758	Seawater	ERKFLQAENELVQINKLAECPKNDTVRKYMAMNDKIAEGLVA
Ga0181414_10605961	3300017759	Seawater	FLQAENELVQINKLTESPKNDTVRKYMTMNDKIAEGMVA
Ga0181408_10514933	3300017760	Seawater	DRRIQESIASERKFIQAETELVTINRLEESPKNETVRAYMKMNDKLKEGMVA
Ga0181394_12721652	3300017776	Seawater	KEAENELVQINKLTESPKNDTVRKYMAMNDKLKEGMVA
Ga0181379_12864121	3300017783	Seawater	ETVAFERKFLQAENEMVQINKLEESPKNDTVRAYMKMNDKLKEGMVA
Ga0181568_113094401	3300018428	Salt Marsh	QAEEELATINRLTDAPKYEEVRAYMKMNQKLKEGLVA
Ga0182073_13011501	3300019274	Salt Marsh	ETTDFDRKFLQAEQELMTINRLTECPKNDTVRAYMKMNEKLAEGMVQ
Ga0206125_103602531	3300020165	Seawater	FERKFLQAENELVQINKLTECPKNDTVRKYMTMNDKIAEGMVA
Ga0181588_103797691	3300020168	Salt Marsh	RKFLQAEQELITINRLTECPKNDTVRAYMKMNEKLAEGMVA
Ga0206124_103139572	3300020175	Seawater	ERSFLQAENELVQINKLEESPKNDTVRAYMKMNDKLKEGMVA
Ga0211633_10591783	3300020259	Marine	AENELVQINKLTESPKNDTVRKYMTMNDKLKEGMVA
Ga0211522_10641431	3300020314	Marine	DFDRKFLQAETELATINRLTECPKNDTVRAYMIMNDMLQEGLTQGGQ
Ga0211510_11246902	3300020336	Marine	IRNIIETTDFERKFLQAETELVKINRLTECPKNDAVRQYMTMNDKLKEGMVA
Ga0211607_10482484	3300020346	Marine	GTSDFYSFRKRIAETISSERKFLKAETELVAINRLKEAPKNDTVREYMKMNEKLAEGLVA
Ga0211601_11563952	3300020351	Marine	LQAENELVQINKLTECPKNDTVRKYMTMNDKIAEGMVA
Ga0211636_101115635	3300020400	Marine	FIQAESELVQINKLTESPKNDTVRAYMTINDRLQEGLAT
Ga0211516_102850323	3300020413	Marine	SDYKKIVEAIADDRKFQQAEQELITINRLESFPKVDDVRSYMRMNNKLAEGLVV
Ga0211653_104078213	3300020421	Marine	SEYLRRIKESIAFERKFLQAENELVQINKLTESPKNDTVRKYMTMNEKIAEGMVA
Ga0211620_101964621	3300020424	Marine	SDHYWYFKRIDESVARERKFLQAEAELVAINKLQEAPKNDTVREYMKMNEKLAEGLVA
Ga0211622_102960073	3300020430	Marine	FRKKIAETISSERKFLKAETELVAINRLKEAPKNDTVREYMKMNEKLAEGLVA
Ga0211579_103985434	3300020472	Marine	QAENELVQINKLTESPKNDTVRAYMRMNDKIAEGMVA
Ga0211541_105797851	3300020475	Marine	KFLQAETELVQINKLTESPKNDTVRAYMKMNDKIAEGMVA
Ga0213866_104623091	3300021425	Seawater	ERKFLQAENELVMINRLTECPKNDTVRAYMKMNEKLAEGMVA
Ga0222718_102706541	3300021958	Estuarine Water	AENELVQINKLTECPKNDDVRSYMKMNDKIAEGMVA
Ga0222718_103039173	3300021958	Estuarine Water	IAETVAFERKFLQAETELVQINRLTESPKNDTVRAYMKMNDKLKEGMVA
Ga0222714_103841533	3300021961	Estuarine Water	LQAENELVQINKLTESPKNDTVRKYMAMNDKLAEGMVA
Ga0222719_103758091	3300021964	Estuarine Water	FERKFLQAETELVQINKLEESPKNDTVRAYMKMNDKLKEGMVA
Ga0222662_10148165	3300022885	Saline Water	TIAFERKFLQAETELVTINRLEQSPKNDDVRAYMRMNEKLTEGLVA
Ga0255753_11488361	3300022926	Salt Marsh	RKFLQAETELVQINKLEESPKNDTVRAYMKMNDKLKEGMVA
Ga0255758_104365992	3300022928	Salt Marsh	RRIQNTIDSERKFLQAETELVTINRLTECPKNDTVRAYMKMNDKLAEGMVQ
Ga0255743_104311364	3300023110	Salt Marsh	EQELITINRLTECPKNDTVRAYMKMNEKLAEGMVA
Ga0255772_101339796	3300023176	Salt Marsh	FLQAEQELITINRLTECPKNDTVRAYMKMNEKLAEGMVA
Ga0208434_10323791	3300025098	Marine	KFLQAENELVQINKLTEGPKNDTVRKYMKMNDKIAEGMVA
Ga0209634_11900703	3300025138	Marine	YIDRVKESIAFERKFLQAETELVSINKLEESPKNDDVRSYMKMNDKIAEGMAS
Ga0209337_13421921	3300025168	Marine	IAFERKFLQAETELISINKLEESPKNDDVRTYMKMNDKIAEGLVA
Ga0209195_10301751	3300025590	Pelagic Marine	RSFLQAENELVQINKLEESPKNDTVRAYMKMNDKLKEGMVA
Ga0209041_10720923	3300025623	Marine	TIAFERKFLQAENELVQINKLTESPKNDTVRKYMKMNEKLAEGMVA
Ga0209095_11557533	3300025685	Pelagic Marine	FERKFLQAENELVQINKLTECPKNDDVRSYMKMNDKIAEGMVA
Ga0209199_101864612	3300025809	Pelagic Marine	FERKFLQAENELVQINKLEESPKNDDVRSYMRMNEKLAEGMVA
Ga0209199_12991973	3300025809	Pelagic Marine	FERKFLQAETELVTINRLEQSPKNDDVRSYMRMNDKIAEGMAS
Ga0209603_10950811	3300025849	Pelagic Marine	VAFERKFLQAENELVQINKLTECPKNDTVRKYMTMNDKIAEGMVA
Ga0209630_100513941	3300025892	Pelagic Marine	RKFLQAENELVQINKLTECPKNDTVRKYMTMNDKIAEGMVA
Ga0208275_10452001	3300026182	Marine	YNKDIDKTIASERKFLQAETELVAINKLEESPKNADVHAYIKMNEKLKEGLIA
Ga0208407_11224722	3300026257	Marine	YSYNLDIDKTIASERKFLQAETELVAINKLEESPKNADVHAYIKMNEKLKEGLVA
Ga0209709_100598601	3300027779	Marine	AFERSFLQAETELVAINKLDESPANDTVRTYMKMNEKLAEGMVA
Ga0209502_101012106	3300027780	Marine	VKESIAFERKFLQAETELVSINKLEESPKNDDVRSYMKMNDKIAEGMAS
Ga0209711_101605824	3300027788	Marine	AFERKFLQAETELVSINKLEESPKNDDVRSYMRMNDKIAEGLVA
Ga0209501_102971741	3300027844	Marine	IAFERKFLQAETELVSINNLTECPANDTVRTYMKMNEKLAEGMVA
Ga0308025_11593963	3300031143	Marine	MTEIVNFERAFLQAENELVQINKLEESPKNDDVRSYMKMNDKIAEGLVA
Ga0307488_102359731	3300031519	Sackhole Brine	IAFERKFLQAETELVSINNLEESPKNDDVRSYMKMNDKIAEGLVA
Ga0307488_102690621	3300031519	Sackhole Brine	DRVKESIAFERKFLQAETELVSINKLEESPKNDDVRSYMRMNDKIAEGLVA
Ga0308134_11433071	3300031579	Marine	FLQAETELISINKLEESPKNDDVRSYMRMNEKLTEGLVA
Ga0302137_12698593	3300031588	Marine	VKRVKESIAFERSFLQAETELVAINKLDESPANDTVRTYMKMNEKLAEGMVA
Ga0302131_11206251	3300031594	Marine	AFERKFLQAEIELVSINKLEESPKNDDVRSYMRMNDKIAEGLVA
Ga0302116_11537201	3300031597	Marine	AETELISINKLEESPKNDDVRTYMKMNDKIAEGLVA
Ga0302116_11606401	3300031597	Marine	QAETELISINKLEESPKNDDVRSYMRMNDKIAEGLVA
Ga0308007_101318755	3300031599	Marine	YVRRVKESIAFERSFLKAEDELVAINNLDECPKNDTVRTYMKINEKLTEGLVA
Ga0302119_102776343	3300031606	Marine	YVKRVKESIAFERKFLQAETELVAINKLDESPANDTVRTYMKMNEKLAEGMVA
Ga0302126_102092883	3300031622	Marine	FERKFLQAETELVSINKLEESPKNDDVRSYMKMNDKIAEGMVS
Ga0302118_103496381	3300031627	Marine	AETELVSINKLEESPKNDDVRSYMRMNDKIAEGLVA
Ga0308004_103867601	3300031630	Marine	TETVAFERKFLQAENELVTINRLDQSPTNDDVRSYMRMNDKIAEGLVA
Ga0315326_104240071	3300031775	Seawater	AFERKFLQAENELVQINKLTESPKNDTVRKYMAMNDKIAEGLVA
Ga0315318_108112593	3300031886	Seawater	RKFLQAEDELVAINKLDKCPLNDTVRAFMKMNEKLAEGLGA
Ga0315316_103500611	3300032011	Seawater	FERKFIQAETELVTINRLEESPKNETVRAYMKMNDKLKEGMVA
Ga0315330_100843841	3300032047	Seawater	RMTETVAFERKFLQAENELVQINKLEESPNNDTVRAYMKMNDKLKEGMVA
Ga0302127_102285623	3300032151	Marine	SIAFERKFLQAETELVSINRLEESPKNDDVRSYMKMNDKIAEGMAS
Ga0314858_155860_459_587	3300033742	Sea-Ice Brine	ERKFLQAETELVSINNLEESPKNDDVRSYMKMNDKIAEGLVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103390

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences