Metagenome Family F103366

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103366
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	65 residues
Representative Sequence	MRRATKRGPGPSHLLIAPDHAGNVVGIDPHKQTLTATVVDPRGGIVASEHFRVSGAGHRALEA
Number of Associated Samples	79
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.02 %
% of genes near scaffold ends (potentially truncated)	91.09 %
% of genes from short scaffolds (< 2000 bps)	94.06 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.337 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (28.713 % of family members)
Environment Ontology (ENVO)	Unclassified (48.515 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.337 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 24.18% Coil/Unstructured: 75.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02371	Transposase_20	9.90
PF07592	DDE_Tnp_ISAZ013	2.97
PF05685	Uma2	0.99
PF00106	adh_short	0.99
PF01548	DEDD_Tnp_IS110	0.99
PF12833	HTH_18	0.99
PF01695	IstB_IS21	0.99
PF02899	Phage_int_SAM_1	0.99
PF00078	RVT_1	0.99
PF12681	Glyoxalase_2	0.99
PF12762	DDE_Tnp_IS1595	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	10.89
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.99
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.99
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.99
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.34 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.34 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.34 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	61.39 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	16.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	16.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.95 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7.92 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.98 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.99 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.83 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	4.95 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.98 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.98 %
Paraconexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae	0.99 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.99 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.99 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.83 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.97 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.98 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	1.98 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.98 %
Paraconexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter	0.99 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.99 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.99 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.83 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.98 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.98 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.98 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.98 %
Paraconexibacter antarcticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	0.99 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.99 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.99 %
Micromonospora aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora aurantiaca	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.83 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1.98 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.98 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.98 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.98 %
Arthrobacter sp. ok909	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ok909	0.99 %
Frankia sp. EUN1f	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	0.99 %
Paraconexibacter antarcticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	0.99 %
Micromonospora aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora aurantiaca	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120182825	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300003861\|Ga0031654_10222364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	543	Open in IMG/M
3300005093\|Ga0062594_102857886	Not Available	537	Open in IMG/M
3300005175\|Ga0066673_10503886	All Organisms → cellular organisms → Bacteria → Terrabacteria group	713	Open in IMG/M
3300005337\|Ga0070682_101728106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora aurantiaca	544	Open in IMG/M
3300005897\|Ga0075281_1027415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	823	Open in IMG/M
3300005950\|Ga0066787_10115833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	583	Open in IMG/M
3300005952\|Ga0080026_10168523	All Organisms → cellular organisms → Bacteria → Terrabacteria group	639	Open in IMG/M
3300005994\|Ga0066789_10034699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2235	Open in IMG/M
3300005995\|Ga0066790_10015148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3389	Open in IMG/M
3300005995\|Ga0066790_10151587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	992	Open in IMG/M
3300005995\|Ga0066790_10265119	All Organisms → cellular organisms → Bacteria → Terrabacteria group	733	Open in IMG/M
3300006102\|Ga0075015_100057996	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300006102\|Ga0075015_100474705	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300006354\|Ga0075021_10979980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300006636\|Ga0075525_10074425	Not Available	651	Open in IMG/M
3300006642\|Ga0075521_10520338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	583	Open in IMG/M
3300006797\|Ga0066659_11280781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ok909	611	Open in IMG/M
3300006806\|Ga0079220_11446189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300009698\|Ga0116216_10824748	All Organisms → cellular organisms → Bacteria → Terrabacteria group	556	Open in IMG/M
3300009762\|Ga0116130_1306512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300010041\|Ga0126312_10739706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	711	Open in IMG/M
3300014156\|Ga0181518_10029004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3611	Open in IMG/M
3300014162\|Ga0181538_10493387	Not Available	645	Open in IMG/M
3300015374\|Ga0132255_106245332	Not Available	504	Open in IMG/M
3300016270\|Ga0182036_11071007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	667	Open in IMG/M
3300016319\|Ga0182033_11141507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	697	Open in IMG/M
3300017659\|Ga0134083_10545327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300017789\|Ga0136617_10122851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2232	Open in IMG/M
3300017939\|Ga0187775_10530198	Not Available	505	Open in IMG/M
3300017955\|Ga0187817_10533079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	749	Open in IMG/M
3300017961\|Ga0187778_10105291	Not Available	1756	Open in IMG/M
3300017961\|Ga0187778_10543757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300017961\|Ga0187778_10720640	Not Available	676	Open in IMG/M
3300017966\|Ga0187776_10516981	All Organisms → cellular organisms → Bacteria → Terrabacteria group	819	Open in IMG/M
3300017966\|Ga0187776_10545900	Not Available	799	Open in IMG/M
3300017966\|Ga0187776_10985047	Not Available	618	Open in IMG/M
3300017972\|Ga0187781_10496459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300017973\|Ga0187780_10487787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	879	Open in IMG/M
3300017973\|Ga0187780_11022287	Not Available	603	Open in IMG/M
3300017974\|Ga0187777_10173837	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300017974\|Ga0187777_10299613	Not Available	1099	Open in IMG/M
3300017974\|Ga0187777_10595006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	779	Open in IMG/M
3300017974\|Ga0187777_10955743	Not Available	618	Open in IMG/M
3300017974\|Ga0187777_11315744	Not Available	531	Open in IMG/M
3300017999\|Ga0187767_10263770	Not Available	573	Open in IMG/M
3300018029\|Ga0187787_10324659	Not Available	585	Open in IMG/M
3300018032\|Ga0187788_10284431	All Organisms → cellular organisms → Bacteria → Terrabacteria group	665	Open in IMG/M
3300018033\|Ga0187867_10370233	All Organisms → cellular organisms → Bacteria → Terrabacteria group	796	Open in IMG/M
3300018033\|Ga0187867_10684649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	559	Open in IMG/M
3300018043\|Ga0187887_10968623	Not Available	503	Open in IMG/M
3300018047\|Ga0187859_10845646	Not Available	527	Open in IMG/M
3300018058\|Ga0187766_10349979	Not Available	967	Open in IMG/M
3300018058\|Ga0187766_11001983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300018058\|Ga0187766_11037404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300018064\|Ga0187773_10167306	Not Available	1147	Open in IMG/M
3300018064\|Ga0187773_11024518	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300018085\|Ga0187772_10878184	Not Available	651	Open in IMG/M
3300018088\|Ga0187771_10360664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1223	Open in IMG/M
3300018088\|Ga0187771_10834304	All Organisms → cellular organisms → Bacteria → Terrabacteria group	782	Open in IMG/M
3300018089\|Ga0187774_11226037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300018089\|Ga0187774_11471904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300018433\|Ga0066667_11419990	All Organisms → cellular organisms → Bacteria → Terrabacteria group	610	Open in IMG/M
3300018466\|Ga0190268_11487783	All Organisms → cellular organisms → Bacteria → Terrabacteria group	587	Open in IMG/M
3300018468\|Ga0066662_10162199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1709	Open in IMG/M
3300018468\|Ga0066662_12944909	Not Available	506	Open in IMG/M
3300018482\|Ga0066669_10194974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1544	Open in IMG/M
3300020150\|Ga0187768_1157635	Not Available	524	Open in IMG/M
3300021388\|Ga0213875_10100668	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300024295\|Ga0224556_1147785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
3300025427\|Ga0208077_1003664	Not Available	2166	Open in IMG/M
3300025474\|Ga0208479_1048985	Not Available	839	Open in IMG/M
3300025474\|Ga0208479_1092104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300025475\|Ga0208478_1087173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300025857\|Ga0209014_10124700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	975	Open in IMG/M
3300025878\|Ga0209584_10395164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300026217\|Ga0209871_1046662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	821	Open in IMG/M
3300026294\|Ga0209839_10014987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3132	Open in IMG/M
3300027696\|Ga0208696_1183846	Not Available	667	Open in IMG/M
3300027911\|Ga0209698_11357011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300028743\|Ga0302262_10315983	All Organisms → cellular organisms → Bacteria → Terrabacteria group	530	Open in IMG/M
3300028870\|Ga0302254_10394686	Not Available	512	Open in IMG/M
3300029944\|Ga0311352_10205859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1675	Open in IMG/M
3300029984\|Ga0311332_11256149	Not Available	598	Open in IMG/M
3300030010\|Ga0302299_10690909	All Organisms → cellular organisms → Bacteria → Terrabacteria group	500	Open in IMG/M
3300030524\|Ga0311357_10199077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1959	Open in IMG/M
3300031234\|Ga0302325_12979032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300031520\|Ga0272428_1112405	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1645	Open in IMG/M
3300031549\|Ga0318571_10311272	Not Available	595	Open in IMG/M
3300031718\|Ga0307474_10467721	All Organisms → cellular organisms → Bacteria → Terrabacteria group	987	Open in IMG/M
3300031805\|Ga0318497_10796141	Not Available	530	Open in IMG/M
3300031902\|Ga0302322_100868966	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1080	Open in IMG/M
3300032067\|Ga0318524_10229148	Not Available	954	Open in IMG/M
3300032805\|Ga0335078_11300009	All Organisms → cellular organisms → Bacteria → Terrabacteria group	830	Open in IMG/M
3300032805\|Ga0335078_12257445	All Organisms → cellular organisms → Bacteria → Terrabacteria group	571	Open in IMG/M
3300032828\|Ga0335080_11704156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	618	Open in IMG/M
3300032892\|Ga0335081_10754650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1170	Open in IMG/M
3300032892\|Ga0335081_11486646	Not Available	751	Open in IMG/M
3300032954\|Ga0335083_11265052	Not Available	569	Open in IMG/M
3300033433\|Ga0326726_12337258	Not Available	519	Open in IMG/M
3300034163\|Ga0370515_0366204	Not Available	609	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.02%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.16%
Aquatic	Environmental → Aquatic	13.86%
Plants	Host-Associated → Plants	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.27%
Freshwater	Environmental → Aquatic → Freshwater	9.90%
Peat	Environmental → Terrestrial → Peat	9.90%
Sediment	Environmental → Aquatic → Sediment	3.96%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	44.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Loam	Environmental → Terrestrial → Soil → Loam	2.97%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.99%
Ice	Environmental → Aquatic → Freshwater → Ice	0.99%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	36.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	28.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	5.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.99%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.99%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006636	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1201828251	3300002568	Soil	MAARKHRGRGPSPLLLTPDYAGNVVGIDRHTRTLTAVVVDARGAILAGEHFRVSGEGHRA
Ga0031654_102223641	3300003861	Freshwater Lake Sediment	MSRNVRRGPGPSSTLITPDRAGNVVGVDPHKRTLTATVVDPRGGVLASEHFRVSGDGHRT
Ga0062594_1028578861	3300005093	Soil	MAARKHRGPGPSHLLLTPDHAGNLVGIDPHKRTLTAVVVDARGAILAGEHFRVSGEGHRA
Ga0066673_105038861	3300005175	Soil	VRRIQKRGPGPSRLLLAPDHAGKVVGIDPPKLTLTATVVDLRGGIVASEHFKVSGGGPGA
Ga0070682_1017281061	3300005337	Corn Rhizosphere	MAACRHRGPGPSHLLLTPDHAGNVVGIDPHKRTLSAAVVDARGGIVASEHFRVSVDGHRALEAWARSF
Ga0075281_10274152	3300005897	Rice Paddy Soil	MGTVKKRGPGPSSLWLTPDHAGNVVGIDPHKRTLSATVADARGGILGSAHFR
Ga0066787_101158331	3300005950	Soil	MSRNVRRGPGPSSTLITPDRAGNVVGVDPHKRTLTATVVDPRGGIVGSEHFRVSGDGHRALEAWARQFGQ
Ga0080026_101685232	3300005952	Permafrost Soil	MRRAIKRGPGPSHLLLTPDQAGNVVGIDPHKRTLTATVVDPRGGILASEHFRVSGDGHRAMEAWARQFGAVARWG
Ga0066789_100346992	3300005994	Soil	VRRAKQRGPGPSHLLITPDHAGNAVGIDPHKQTLTATVAAPRSGIVASEHFKVSGGGHRALEAWARQFGQIAR*
Ga0066790_100151485	3300005995	Soil	MRVKKQRGPGPSSTLITRDHAGNVVGIDPHKRTLSATIVDPRGGILASEHFNVSGNGHRALEAWAEQFGQIVRWGSRAPRAAAVTPRCS*
Ga0066790_101515872	3300005995	Soil	MRAKKRRGPGPSSTLLTPDRAGNVVGVDPHKRTLSATIVDPRGGILASEHFRVSGDGHRALEAWALQFGLV
Ga0066790_102651192	3300005995	Soil	VRRAKQRGPGPSHLLITPDHAGNVVGIDPHKQTLTATVAAPRSGIVASEHFKVSGGGHRALEAWARQFGQIAR*
Ga0075015_1000579963	3300006102	Watersheds	MSRQVTRGPGPSSTLITPDQAGNVVGVDPHKRTLTATVLDARGGIVASEHFRVSGDGH
Ga0075015_1004747051	3300006102	Watersheds	MSRRGPGPSSVLLTPDQAGNVVGVDPHKRSLSATVVDLRGGLLAGEHFRV
Ga0075021_109799802	3300006354	Watersheds	MRTVQKRGPGASHLLMTPDRAGNVVGIDPHKRTLTATVVDPRGGVLASEHFRVSGDGHRELEAWAR
Ga0075525_100744251	3300006636	Arctic Peat Soil	MASRRRGPGPSSVLITPDCAGNVVGVDPHKRTVSASVADPRGGIVATEHFRVS
Ga0075521_105203381	3300006642	Arctic Peat Soil	MSTTRRGPGPSSVLTTPDHAGNVVGVDPHKRTLTATVADPRGGILASGHFRVSGDGHRALEAWARQFGQIAR
Ga0066659_112807811	3300006797	Soil	MRREATKRGPGPSQLLMTPDHAGNVVGVDPHKRTLTATVADARGGILASAHFR
Ga0079220_114461892	3300006806	Agricultural Soil	MSRRRGPGRSSVLLTPDHAGNVVGVDPHKRSLSATVVDPRGGLLASEHFRVSGDGHRALEAWARQFG
Ga0116216_108247481	3300009698	Peatlands Soil	MSRRRGPGPSSVLLTPDHAGNVVGVDPHKRSLSATVVDPRGGLLAGEHFRVSGDGHRALEAWARQFGP
Ga0116130_13065121	3300009762	Peatland	MRRAAKRGPGPSHLLITPDHAGNVVGIDPHKQTLTATVVDPCGGIVASEHFKVSGDGHRALEAWAKQFG
Ga0126312_107397061	3300010041	Serpentine Soil	MRASRRGPGPSSVLITPDHAGNVVGIDPHKRTLSAAVVDARGGIVASAHFRVSGEGHRALEAWA
Ga0181518_100290046	3300014156	Bog	MRRATKRGPGPSHLLITPDRAGNVVGIDPHKQTLTATVIDPRGGIVASEHFRVS
Ga0181538_104933871	3300014162	Bog	MEVVMSRYVRRGPGPSSTLITPDLAGNVVGVDPHKRTLTATIVDARGGIVASEHFRVSGDGHRA
Ga0132255_1062453321	3300015374	Arabidopsis Rhizosphere	MRTAKKRGPGPSHLLLTPDHAGNVVGIDPHKRTLTATVADARGGVLASEHFRV
Ga0182036_110710071	3300016270	Soil	MRRAKKRGPGPSHLLMTPDHAGNVVGIDPHKRTLTATVADARGGILGSEHFRVSGEGHR
Ga0182033_111415071	3300016319	Soil	MSRQVKRGPGRSSTLLTPDHAGNVVGVDPHKRTLTATVVDTRGGILASEHFRVSGDGHRALEAWARQ
Ga0134083_105453271	3300017659	Grasslands Soil	MTRQVRRGPGPSTTLLTPDHAGNVVGIDPHKRTLTATVVDTRGGILASEHFRVSGDR
Ga0136617_101228513	3300017789	Polar Desert Sand	MVGRKRGPGPSLMLISEARAGNAVGIDPHKRTLTAVVVDARGGILAGEHFKVSGDGHRALEAWALSFGPVVR
Ga0187775_105301981	3300017939	Tropical Peatland	MSSRHIRRGPGPSHVLITPDHAGNVVGVDPHKRTVTATVVDPRGGIVASEHFRVSGDGHRAL
Ga0187817_105330792	3300017955	Freshwater Sediment	MSSQTRRGPGPSSTLITPDRAGNVVGVDPHKRTLTATVVDPRGGIVATEHFRVSGDGHRA
Ga0187778_101052912	3300017961	Tropical Peatland	MRRQLRRGPGPSRTLITPDHAGNVVGVDPHKRTLTATVVDPRGGIVASEHFRVSGD
Ga0187778_105437571	3300017961	Tropical Peatland	VSRAKKRGPGPSHLLITPDHAGNVVGVDPHKRTLTATVVDPRGGVVASEHFKVSGGGHRALEAWARQFGQIARWG
Ga0187778_107206401	3300017961	Tropical Peatland	MSRQVKRNPRSVKRGPGPSSTLLTPDRAGNVVGVDPHKRTLTATVVDPRGGIVASEHFRVSGD
Ga0187776_105169812	3300017966	Tropical Peatland	MRTAKKRGPGPSHLLLTPDRAGNVVGIDPRKRTLTATVVDPRGGVLASEHSRVSGDGHRALEAWARQFGQIARWGIDGSA
Ga0187776_105459001	3300017966	Tropical Peatland	MRRAKKRGPGPSHLLMTPDHAGNVVGVDPHKRTLTVTVVDARGGILSSAHFRVSGEGHRELEAWA
Ga0187776_109850471	3300017966	Tropical Peatland	MPANNKRGPGPSSVLLTPAHAGNVVGVDPHKLTLTATVLDPRGGVLAGEHFRV
Ga0187781_104964593	3300017972	Tropical Peatland	MPANKKRGPGPSHLLLTPDHAGNVVGVDPHKLTLTATVLDPRGGIVASEHFNVSGEGHRALEAWARQHGQIARWGVENAAG
Ga0187780_104877871	3300017973	Tropical Peatland	MRKTSKRRGPGPSSVLLTPDHAGNVVGIDPHKRTLTATVLDYRGGILASEHFR
Ga0187780_110222871	3300017973	Tropical Peatland	MRRQVKRGPGPSSTLITPDRAGNVVGVDPHKRTLTATIVDPRGGLVASEHFRVSGDG
Ga0187777_101738373	3300017974	Tropical Peatland	VRSAKKRGPGPSSVLVTPDHAGNVVGVDPHKLTLTATVMDPRGGIVASEHFRVSGGG
Ga0187777_102996132	3300017974	Tropical Peatland	MFHVTAQRKREGKVIMSRQVTRNPRSVKRGPGPSSTLLTHDQAGNVVGVDPHKRTLTATVADPRGGIVASEHFRVSGEGHRALEAWA
Ga0187777_105950061	3300017974	Tropical Peatland	MGTHRKRVRPGPGPSSTLITPDRAGNVVGIDPHKRTLTATIVDPRGGIVAGEHFRVSGDGHRA
Ga0187777_109557431	3300017974	Tropical Peatland	VRGGAKKRGPGPSHLLLTPDHAGNVVGIDPHKQTLTATVVDPRGGIAASEHFKVSG
Ga0187777_113157441	3300017974	Tropical Peatland	MGRQVRRGPGPSSTLITPDHAGNVVGVDPHKRTLTATIVDPRGGLVASEHFRVSGDGHR
Ga0187767_102637701	3300017999	Tropical Peatland	VSSTKKRGPGPSSVLITPDHAGNVVGVDPHKRTLTATVVDPRGGVVASEHFKVSGGG
Ga0187787_103246591	3300018029	Tropical Peatland	VRRTQKRGPGRSSVLITPDHAGNVVGIDPHKQTLTATVVDARGGIVASEHFRVSGGGHRALEAWARQ
Ga0187788_102844311	3300018032	Tropical Peatland	MRTAKKRGPGPSHLLLTPDRAGNVVGIDPHKRTLTATVVDSRGGVIGAEHFRVSGDGHRALEAWARQF
Ga0187867_103702332	3300018033	Peatland	LRTAKKRGPGPSHLLLTPDHAGNVVGIDPHKRTLTATVVDPRGGVLAAEHFRVSGDGHRALEAWARQFG
Ga0187867_106846491	3300018033	Peatland	MRTAKKRGPGPSHLLITPDHAGNVVGIDPHKRTVTATIADPRGGILASEHFRVSGDGHRALEAWALGFGPV
Ga0187887_109686231	3300018043	Peatland	LMRRATKRGPGPSHLLITPDQASSVVEIDPHKQTLTATVVDPRGGVVASEHFRVSGDGHRALE
Ga0187859_108456461	3300018047	Peatland	MRRARKRGPGPSHLLITPDCAGNVVGIDPHKLTVTATIADPRGGVLASEHFRVSGDGHRSHEAWALGFGP
Ga0187766_103499791	3300018058	Tropical Peatland	MRRAKKRGPGPSHLLMTPDRAGNVVGIDPHKRTLTATVADPRGGILGSEHFLPGVAV
Ga0187766_110019831	3300018058	Tropical Peatland	MGRQVRRGPGPSSTLITPDHAGNVVGVDPHKRTLTATIVDPRGGLVASEHFRVSGDGHRALEAWAKQFGP
Ga0187766_110374041	3300018058	Tropical Peatland	MRRQVKRGPGPSSTLITPDRAGNVVGVDPHKRTLTATIVDPRGGLVASEHFRVSGDGHRALEAWAKQFG
Ga0187773_101673062	3300018064	Tropical Peatland	MRRAKKRGPGPSHLLMTPDHAGNVVGIDPHKRTLTATVADARGGILGSEPFRVS
Ga0187773_110245181	3300018064	Tropical Peatland	MRRAKKRGPGPSHLLITPDHAGNVVGIDPHKRTLTATIIDPRGGVLASEHFRVSGEGHRALEAWARQYGQVARWG
Ga0187772_108781841	3300018085	Tropical Peatland	VRRTKKRGPGRSSVLITPDHAGNVVGVDPHKQTLIATVADPRGGIVASEHFKVSGGGHRALEAWA
Ga0187771_103606641	3300018088	Tropical Peatland	MSRQTRRGPGPSSTLITLDQAGNVVGIDPHKRTLTATIVDPRGGLVASEHFRVSGDGHRALEAWALQFGPIV
Ga0187771_108343041	3300018088	Tropical Peatland	MRRATKRGPGPSHLLIAPDHAGNVVGIDPHKQTLTATVVDPRGGIVASEHFRVSGAGHRALEA
Ga0187774_112260371	3300018089	Tropical Peatland	MMSRQIRRGPGPSSTLITPDHAGNVVGVDPHKRTLTATVVDPRGGIVASEHFRVSGDGHRALEAWARQF
Ga0187774_114719041	3300018089	Tropical Peatland	VKRAKRRGPGPSHLLMTPDHAGNVVGVDPHKHTLTATVVDPRGGIVASEHFRV
Ga0066667_114199901	3300018433	Grasslands Soil	MRTGKKRGPGASHLLMAPDHAGNVVGVDPHKRTLTATVADARGGILASAHFRVSGEGHRELEAWAQQFGQIARWGIE
Ga0190268_114877831	3300018466	Soil	MAARKRRGPGPSHLLLTPDHAGNVVGIDPHKRTLSAAVVDARGGLVASAHFRVSGQGHRALEAWARSFG
Ga0066662_101621991	3300018468	Grasslands Soil	MARTKKRGAGPSHVLITPDHAGNLVGVDPHKQTLTATVIDPRGGILAGEHFRVSGEGHRALEAWARQFGAIARWGLRAPRAGGVTRRCS
Ga0066662_129449091	3300018468	Grasslands Soil	MSTHRRRVRPGPGPSSTLITPDRAGNVVGVDPHKRTLTATVVDPRGGVVASEHFRVSGDGHRAL
Ga0066669_101949741	3300018482	Grasslands Soil	VRRTQKRGPGPSRLLLTPDHAGNVVGIDPPKQTLNATVVDPGGGIVASEHFKVSGGGHRALEAWARRFGQIA
Ga0187768_11576351	3300020150	Tropical Peatland	VSSTKRRGPGPSSVLITPDRAGNVVGVDPHKRTLTATVVDPRGGVVASEHFKVSG
Ga0213875_101006681	3300021388	Plant Roots	MGRVKKRGPGPSSLLVTPDRAGNVVGIDPHKRTLSATILDARAGVLGSAHFRVS
Ga0224556_11477851	3300024295	Soil	MKRGPGPSHLLLTPDRAGNVVGIDPHKRTLTATVVDPRGAILASEHFRVSGDGHRAME
Ga0208077_10036643	3300025427	Arctic Peat Soil	MSRSGLGPSSVLVTPDHAGNVVGVDPHKRTLTATIADPRGGILASGHFRVSG
Ga0208479_10489851	3300025474	Arctic Peat Soil	MRRAKKRGPGPSHLLITPDSAGNVVGIDPHKQTLTATIADPRGGILAGEHFPGVRGRASG
Ga0208479_10921041	3300025474	Arctic Peat Soil	MRRARKRGPGPSHLLITPDCAGNVVGIDPHKRTVTATVADPRGGILASEHFRVSGDGHRALEAWR
Ga0208478_10871731	3300025475	Arctic Peat Soil	MSRSGLGPSSVLVTPDHAGNVVGVDPHKRTLSATVADPRGGILASGHFRVSGDGHRALEAWARQFGQ
Ga0209014_101247001	3300025857	Arctic Peat Soil	MGRSGRQVRRGPGPWSTLITPDRAGNVVGVDPHKRTLTATVVDLCGGIVSSEHFRVS
Ga0209584_103951641	3300025878	Arctic Peat Soil	MVSRRTRRGPGPSSVLLTSDHAGNVVGVDPHKRSLSATVVDPRGGILASEHFRVSGDGHRALEAWA
Ga0209871_10466622	3300026217	Permafrost Soil	MSSRRRGPGPSHVLTTPDHAGNVVGVDPHKRTLTATVADPRGGILASGHFRVSGDGHRALEAWARQFGQIAR
Ga0209839_100149872	3300026294	Soil	MRVKKQRGPGPSSTLITRDHAGNVVGIDPHKRTLSATIVDPRGGILASEHFNVSGNGHRALEAWAEQFGQIVRWGSRAPRAAAVTPRCS
Ga0208696_11838462	3300027696	Peatlands Soil	MRGAKKRGPGGSHLLMTRDHAGNVVGIDPHKRTLTATVADARGGILGSEHFRVSGEGHR
Ga0209698_113570111	3300027911	Watersheds	MRTAKKRGPGPSHLLLTPDHAGNVVGIDPHKRTLTGTVVDPRGGVLASEHFRVSGD
Ga0302262_103159832	3300028743	Fen	VLITPDHAGNVVGIDPHKQTLTATVADPRGGIVASEHFRVSGDGHRALEAWAKQFGAIARWGVE
Ga0302254_103946861	3300028870	Fen	MKRATRRGPGPSHLLMTPDHAGNVVGVDPHKRTLTATVADARGGVLASAHFRVSGEGH
Ga0311352_102058591	3300029944	Palsa	MSSRRRGPGPSHVLTTPDHAGNVVGVDPHKRTLTATVADPRGGILASGHFRVSGDGHRALEAWA
Ga0311332_112561492	3300029984	Fen	MSRAKQGGPGPSHLLTGPDHVGNVVGVDPHKRTLTATVADARGGILSSAHFRVSGEGHRELEAWA
Ga0302299_106909092	3300030010	Fen	MRRATKRGPGPSHVLITPDHAGNVVGIDPHKQTLTATVADPRGGIVASEHFRVSGDGHRALEAWAKQFGAIARWGVE
Ga0311357_101990771	3300030524	Palsa	MASRRRGPGPSSVLITPDCAGNVVGVDPHKRTVSATVADPRGGIVASEHFRVSGDGHRALEVWARQ
Ga0302325_129790321	3300031234	Palsa	MSSRRRGPGPSHVLTTPDHAGNVVGVDPHKRTLTATVADPRGAILASGHFRVSGDGHRALEAWA
Ga0272428_11124054	3300031520	Rock	MSRKRSGPGPSSVLLTPDRAGNVVGVDPHKRSLSATVVDPRGGFVASEHFRVSGDG
Ga0318571_103112721	3300031549	Soil	MRQSSQACAARVRGPSSTLITPDRAGNVIGVDPHKRTLTATIVDPRAGIVASEHFRVSGDGHRAL
Ga0307474_104677211	3300031718	Hardwood Forest Soil	MGTVKRRGPGPSSLLMTPDHAGNVVGIDPHKRTLSATVADARGGILASAHFRISGEGHRELEAWARQFGQIA
Ga0318497_107961412	3300031805	Soil	MTRAKKRGPGPSHLLMTPDHAGNVVGIDPHKRTLTATVADARGGILGSEHFRVSGEGHR
Ga0302322_1008689662	3300031902	Fen	VKRATKRGPGPSHLLMTPDHAGNVVGVDPHKRTLTATVADTRGGILASEHFRVSGEGHRELEAWALQFGQIA
Ga0318524_102291481	3300032067	Soil	MGRAKKRGPGPSSLLMTPDRAGNAVGIDPHKRTLSASVVDARGGVLGSGHFRVSGEGH
Ga0335078_113000091	3300032805	Soil	MSTHRRRVRPGPGPSSTLITPDRAGNVIGVDPHKRTLTATIVDPRAGIVASEHFRVSGDGHRALEAWARQFGPIVRWGSRGRRRLD
Ga0335078_122574451	3300032805	Soil	VRRTEKSGPGPSSVLITPDHAGNVVGIDPHKQTLTATVVDPRGAIAASEHFKVSGDGHRALEAWARQFGQI
Ga0335080_117041561	3300032828	Soil	MSRHVKRGPGPSSTLITPDQAGNVAGIDPHKRTLTATIVDPRGGLVANEHFRVSGNGHRALEAWALQFGPIV
Ga0335081_107546501	3300032892	Soil	MSANKKRGPGPSSVLLTPDHAGNVVGVDPHKLTLTATVLDPRGGVLAGEHFRVSGNGH
Ga0335081_114866461	3300032892	Soil	MSRQRRGTGPSSTLITLDQAGNVVGIDPHKRTLTATIVDPRGGLVASEHFRVSGDGHRALEA
Ga0335083_112650521	3300032954	Soil	VRRTQKRGPGPSSVLITPDHAGNVVGIDPHKQTLTATVVDPRGGIAASEHFKVSGGGHRALEVWA
Ga0326726_123372581	3300033433	Peat Soil	MRREAKNRGPGPSHLLMTPDHAGNVVGVDPHKRTLTATVADARGGILASAHFRVSGEGHRELEAWA
Ga0370515_0366204_3_197	3300034163	Untreated Peat Soil	MRRAQKRGPGPSHLLLTADHAGNAVGIDPHKQTLTATVVDPRGGVVASEHFRVSGGGHRALEAWA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103366

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences