Metagenome / Metatranscriptome Family F103365

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103365
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	70 residues
Representative Sequence	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSEETA
Number of Associated Samples	94
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.25 %
% of genes near scaffold ends (potentially truncated)	35.64 %
% of genes from short scaffolds (< 2000 bps)	82.18 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.089 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.822 % of family members)
Environment Ontology (ENVO)	Unclassified (21.782 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.436 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 0.00% Coil/Unstructured: 80.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF08388	GIIM	22.77
PF00078	RVT_1	19.80
PF13505	OMP_b-brl	0.99
PF03551	PadR	0.99
PF13365	Trypsin_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.99
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.99
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.09 %
Unclassified	root	N/A	8.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.09 %
Unclassified	root	N/A	8.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.09 %
Unclassified	root	N/A	8.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	52.48 %
Unclassified	root	N/A	8.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
Thermotogae	phylum	All Organisms → cellular organisms → Bacteria → Thermotogae	1.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	47.52 %
Unclassified	root	N/A	8.91 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.97 %
Thermotogae	class	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae	1.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	46.53 %
Unclassified	root	N/A	8.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.97 %
Kosmotogales	order	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Kosmotogales	1.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	46.53 %
Unclassified	root	N/A	8.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.97 %
Kosmotogaceae	family	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Kosmotogales → Kosmotogaceae	1.98 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	44.55 %
Unclassified	root	N/A	8.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.97 %
Kosmotoga	genus	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Kosmotogales → Kosmotogaceae → Kosmotoga	1.98 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	44.55 %
Unclassified	root	N/A	8.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.97 %
Kosmotoga olearia	species	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Kosmotogales → Kosmotogaceae → Kosmotoga → Kosmotoga olearia	1.98 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	44.55 %
Unclassified	root	N/A	8.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.97 %
Kosmotoga olearia TBF 19.5.1	strain	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Kosmotogales → Kosmotogaceae → Kosmotoga → Kosmotoga olearia → Kosmotoga olearia TBF 19.5.1	1.98 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_41051_len_1901_cov_10_537086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1951	Open in IMG/M
3300001356\|JGI12269J14319_10082091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1698	Open in IMG/M
3300001867\|JGI12627J18819_10306197	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300002162\|JGI24139J26690_1016799	Not Available	1388	Open in IMG/M
3300002245\|JGIcombinedJ26739_101586980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	551	Open in IMG/M
3300002347\|JGIcombinedJ26865_1035494	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300002908\|JGI25382J43887_10276992	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300002914\|JGI25617J43924_10018300	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M
3300002914\|JGI25617J43924_10339802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	520	Open in IMG/M
3300003369\|JGI24140J50213_10023107	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Kosmotogales → Kosmotogaceae → Kosmotoga → Kosmotoga olearia → Kosmotoga olearia TBF 19.5.1	2318	Open in IMG/M
3300003505\|JGIcombinedJ51221_10017725	All Organisms → cellular organisms → Bacteria → Acidobacteria	2455	Open in IMG/M
3300004080\|Ga0062385_10433192	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300004082\|Ga0062384_100159675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1288	Open in IMG/M
3300004479\|Ga0062595_100994854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	720	Open in IMG/M
3300005174\|Ga0066680_10451477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	812	Open in IMG/M
3300005434\|Ga0070709_11786225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	503	Open in IMG/M
3300005445\|Ga0070708_102027739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	533	Open in IMG/M
3300005518\|Ga0070699_101362660	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005536\|Ga0070697_100640726	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005568\|Ga0066703_10761020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	555	Open in IMG/M
3300005586\|Ga0066691_10738414	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	582	Open in IMG/M
3300005591\|Ga0070761_10462101	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005841\|Ga0068863_101511968	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005938\|Ga0066795_10032007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1532	Open in IMG/M
3300005938\|Ga0066795_10141821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	716	Open in IMG/M
3300005994\|Ga0066789_10317453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	651	Open in IMG/M
3300006028\|Ga0070717_10420384	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300006041\|Ga0075023_100187001	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300006047\|Ga0075024_100158730	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300006059\|Ga0075017_100110425	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300006059\|Ga0075017_100852931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	706	Open in IMG/M
3300006102\|Ga0075015_100506487	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300006354\|Ga0075021_11043728	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300006640\|Ga0075527_10015722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1954	Open in IMG/M
3300006755\|Ga0079222_12603344	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006797\|Ga0066659_10557804	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300006893\|Ga0073928_10134150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2021	Open in IMG/M
3300007258\|Ga0099793_10001671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7171	Open in IMG/M
3300009038\|Ga0099829_10567276	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009089\|Ga0099828_10299352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1447	Open in IMG/M
3300009090\|Ga0099827_10093107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2381	Open in IMG/M
3300009615\|Ga0116103_1008666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3518	Open in IMG/M
3300009644\|Ga0116121_1020915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2095	Open in IMG/M
3300010339\|Ga0074046_10255203	Not Available	1087	Open in IMG/M
3300010341\|Ga0074045_10032799	All Organisms → cellular organisms → Bacteria	3904	Open in IMG/M
3300010379\|Ga0136449_103822857	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300011269\|Ga0137392_10309857	Not Available	1305	Open in IMG/M
3300012096\|Ga0137389_10145079	Not Available	1937	Open in IMG/M
3300012199\|Ga0137383_10563830	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300012209\|Ga0137379_10109228	Not Available	2661	Open in IMG/M
3300012211\|Ga0137377_11878835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	517	Open in IMG/M
3300012685\|Ga0137397_10828554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300014490\|Ga0182010_10147767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1210	Open in IMG/M
3300014839\|Ga0182027_10260062	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Kosmotogales → Kosmotogaceae → Kosmotoga → Kosmotoga olearia → Kosmotoga olearia TBF 19.5.1	1981	Open in IMG/M
3300017931\|Ga0187877_1237087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	707	Open in IMG/M
3300017938\|Ga0187854_10062761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1819	Open in IMG/M
3300017988\|Ga0181520_10925026	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300017995\|Ga0187816_10054779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1672	Open in IMG/M
3300017998\|Ga0187870_1034105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2321	Open in IMG/M
3300018002\|Ga0187868_1173129	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300018022\|Ga0187864_10100829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1502	Open in IMG/M
3300018024\|Ga0187881_10366341	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300019786\|Ga0182025_1099865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1040	Open in IMG/M
3300020579\|Ga0210407_10005351	All Organisms → cellular organisms → Bacteria	9928	Open in IMG/M
3300020579\|Ga0210407_10167753	Not Available	1697	Open in IMG/M
3300020579\|Ga0210407_10989933	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300020581\|Ga0210399_10105012	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300020581\|Ga0210399_10447243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1076	Open in IMG/M
3300020581\|Ga0210399_10856497	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300020582\|Ga0210395_10020685	Not Available	4842	Open in IMG/M
3300021401\|Ga0210393_10757699	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300021404\|Ga0210389_10144067	Not Available	1846	Open in IMG/M
3300021405\|Ga0210387_11174379	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300021478\|Ga0210402_10979271	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300022523\|Ga0242663_1098391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	580	Open in IMG/M
3300022531\|Ga0242660_1165710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	588	Open in IMG/M
3300022712\|Ga0242653_1044211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	707	Open in IMG/M
3300025475\|Ga0208478_1076504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	603	Open in IMG/M
3300025484\|Ga0208587_1072299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300025533\|Ga0208584_1028438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1503	Open in IMG/M
3300025939\|Ga0207665_10066191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2459	Open in IMG/M
3300026088\|Ga0207641_10440420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1258	Open in IMG/M
3300026371\|Ga0257179_1042419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	580	Open in IMG/M
3300026920\|Ga0208575_1018610	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300026959\|Ga0207852_1031695	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300027104\|Ga0208095_1015084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	552	Open in IMG/M
3300027105\|Ga0207944_1007039	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300027371\|Ga0209418_1000568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	3428	Open in IMG/M
3300027565\|Ga0209219_1130649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	610	Open in IMG/M
3300027855\|Ga0209693_10009466	Not Available	4549	Open in IMG/M
3300027905\|Ga0209415_10295731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1402	Open in IMG/M
3300030916\|Ga0075386_12139714	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031057\|Ga0170834_100546378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	598	Open in IMG/M
3300031128\|Ga0170823_10493941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1434	Open in IMG/M
3300031474\|Ga0170818_106600069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	523	Open in IMG/M
3300031573\|Ga0310915_10540965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	827	Open in IMG/M
3300031792\|Ga0318529_10406526	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300032160\|Ga0311301_10640038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1517	Open in IMG/M
3300032174\|Ga0307470_10017951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3116	Open in IMG/M
3300032180\|Ga0307471_101547265	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300032205\|Ga0307472_100961355	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.02%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.21%
Aquatic	Environmental → Aquatic	18.81%
Plants	Host-Associated → Plants	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.21%
Freshwater	Environmental → Aquatic → Freshwater	11.88%
Sediment	Environmental → Aquatic → Sediment	5.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.98%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.46%
Loam	Environmental → Terrestrial → Soil → Loam	16.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.98%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.98%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002162	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-21A	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027105	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_01098830	2088090004	Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGPTYNRQHREREGWREGGGGASSSEETA
JGI12269J14319_100820912	3300001356	Peatlands Soil	MARRKLTEAANHFGGVLATARWQGRIKQLEKPSLSQREIAGADLTYNRQHREKEGWREGGGRASSSEETA*
JGI12627J18819_103061971	3300001867	Forest Soil	ETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGRASSSGETA*
JGI24139J26690_10167991	3300002162	Arctic Peat Soil	SELDEGSMVRRKLTEXANHFGGVLATARWQGHIKQLEKPSSSQREIAGEGPTYNRRYREKEGWREGGGGASSSGEAA*
JGIcombinedJ26739_1015869801	3300002245	Forest Soil	QLDEGSMVRRKLTETANHFGGVLARARWQGRIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSVETA*
JGIcombinedJ26865_10354941	3300002347	Arctic Peat Soil	GSMARRKLTEAANHFGGVLATARWQGRIKQLEKPSLSQREIAGADLTYNRQHREKERWREGGGRASSSEETA*
JGI25382J43887_102769921	3300002908	Grasslands Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRRHREKEGWREGGGGAGSSEETA*
JGI25617J43924_100183001	3300002914	Grasslands Soil	VRRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGRASSSGETA*
JGI25617J43924_103398021	3300002914	Grasslands Soil	MARRKLTEAANHFGGVLATARWQGRIKQLEKPSLSQRELAGADLTYNRQHREKERWREGGGRASS
JGI24140J50213_100231071	3300003369	Arctic Peat Soil	MVCRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREIAGEGPTYNRRYREKEGWREGGGGASSSGEAA*
JGIcombinedJ51221_100177252	3300003505	Forest Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQGEITGADLTYNRQHREKEGWREGGGGASSSGETA*
Ga0062385_104331922	3300004080	Bog Forest Soil	MARRKLTEAANHFGGVLAMARQGHVKQLEKPSSPQGEIAGADPIYNRQHREKEGWREGVGRANSSEEAA
Ga0062384_1001596752	3300004082	Bog Forest Soil	MARRKLTEAANHFGGVLAMARWQGHIKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRANSSEEAA*
Ga0062595_1009948542	3300004479	Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGRASSSGETA*
Ga0066680_104514772	3300005174	Soil	MARRKLTEAANHFGGVLATARWQGRIKQLEKPSSSQGEISGAGLTYNRQHREKEGWREGGGRASSSGETA*
Ga0070709_117862251	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQEISGAGLTYNRQHREKEGWREGGGGASSSEEAA
Ga0070708_1020277391	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGRASSSEETA*
Ga0070699_1013626602	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LDEGSMVRRKLTETANHFGGVLATARWQGRIKQLEKPSSSQGEISGAGLTYNRQHREKEGWREGGGRASSSGETA*
Ga0070697_1006407261	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGRASSSGETA*
Ga0066703_107610201	3300005568	Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGRASSSGETA*
Ga0066691_107384141	3300005586	Soil	MERRKLTEAANHFGGVLATARWQGCIKQLEKPSSSQREIAGADLTYNRQHREKEGWREGGGGASSS
Ga0070761_104621012	3300005591	Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQGEISGADLTYNRQHREKEGWREGGGGASSSGETA*
Ga0068863_1015119682	3300005841	Switchgrass Rhizosphere	TANHFGGVLATARWQGHIKQLEKPSSPQSEISGADPTYNRGHREVEGWREGGGWACSSDEAA*
Ga0066795_100320072	3300005938	Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGPTYNRQHREREGWREGGGKASSSEETA*
Ga0066795_101418212	3300005938	Soil	VRRKLTDTANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGANSSEEAA*
Ga0066789_103174532	3300005994	Soil	MARRKLTEMADHFGGVLATARWQGHIKQLEKPSSSQREIAGEGPTYNRRYREKEGWREGGGGASSSGEAA*
Ga0070717_104203843	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGGDLTYNRQYREKEGWREGGGRASSSGETA*
Ga0075023_1001870012	3300006041	Watersheds	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSGETA*
Ga0075024_1001587301	3300006047	Watersheds	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREVGGGASSSEETA*
Ga0075017_1001104251	3300006059	Watersheds	ETANHFGGVLATARWQGHIKQLEKPSSPQREISGADLTYNRQPREKEGWREGGGGASNSEETA*
Ga0075017_1008529312	3300006059	Watersheds	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQGEISGAGLTYNRQHREKEGWREGGVGGGQ*
Ga0075015_1005064872	3300006102	Watersheds	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQGEISGAGLTYNRQHREKEGWREGGGGASSSGETA*
Ga0075021_110437282	3300006354	Watersheds	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQGEISGAGLTYNRQHREKEGWREGGGRASSSGETA*
Ga0075527_100157222	3300006640	Arctic Peat Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGPTYNRQHREREGWREGGGGASSSEETA*
Ga0079222_126033441	3300006755	Agricultural Soil	TANHFGGVLATARWQGHIKQLEKPSSSRREISGAGLTYNRQHREKEGWREGGGGASSSGETA*
Ga0066659_105578042	3300006797	Soil	MVRRKLTETANHFSGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGRASSSGETA*
Ga0073928_101341502	3300006893	Iron-Sulfur Acid Spring	MARRKLTEAANHFGGVLATARWQGCIKQLEKPSSPQREISGAGPTYNRRHREKEGWREGGGRASSSGETA*
Ga0099793_100016715	3300007258	Vadose Zone Soil	MARRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQGEISGVDLTYNRRHREKERWREGGGWASSSGETA*
Ga0099829_105672762	3300009038	Vadose Zone Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKERWREGGGGAGSSEETA*
Ga0099828_102993522	3300009089	Vadose Zone Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKLSSSQREISGAGLTYNRQHREKERWREGGGGAGSSEETA*
Ga0099827_100931071	3300009090	Vadose Zone Soil	MARRKLTEAANHFGGVLATARWQGRIKQLEKPSLSQREIAGADLTYNRQHREKERWREGGGRASSSEETA*
Ga0116103_10086663	3300009615	Peatland	MVRRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREISGEGPTYNRQHREKEGWREGGGGASSSGEAA*
Ga0116121_10209152	3300009644	Peatland	MVRRKLTEAANHFGGVLATARWQGRIKQLEKPSSSQREISGEGPTYNRQHREKEGWREGGGGASSSGEAA*
Ga0074046_102552032	3300010339	Bog Forest Soil	VRRKLTEAANHFGGVLATARGQGHVKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRANSSEEAA*
Ga0074045_100327991	3300010341	Bog Forest Soil	MVRRKLTEAANHFGGVLATARGQGHVKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRANSSEEAA*
Ga0136449_1038228571	3300010379	Peatlands Soil	SPQRPKSSELDEGSMGRRKLTEAANHFGGVLATARWQGHIKQLEKPSLSQREISGAGPTYNRQHREKEGWREGVGGANSSEETE*
Ga0137392_103098571	3300011269	Vadose Zone Soil	EGSMVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKERWREGGGGAGSSEETA*
Ga0137389_101450791	3300012096	Vadose Zone Soil	RRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKERWREGGGGAGSSEETA*
Ga0137383_105638301	3300012199	Vadose Zone Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKERWREGGGGASSSEETA*
Ga0137379_101092282	3300012209	Vadose Zone Soil	MARRKLTETANHFGGVLATARWQGRIKQLEKPSSSQGEISGAGLTYNRRHREKERWREGGGRASSSEEAA*
Ga0137377_118788351	3300012211	Vadose Zone Soil	MARRKLTEAANHFGGVLATARWQGRIKQLEKPSLSQREIAGADLTYNRQHREKERWREGGGGASSSEETA*
Ga0137397_108285541	3300012685	Vadose Zone Soil	MKAAWCVAKLTKTANHFGGVLATARWQGHIKQLEKPSSPQSEIFGLGFYYYRGHREMEGRREGGGRARSSDE
Ga0182010_101477671	3300014490	Fen	MVRRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREISGEGPAYNRQHREKEGWREGGGGASSSGEAA*
Ga0182027_102600621	3300014839	Fen	MVRRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQQEISGEGPAYNRQHREKEGWREGGGGASSSGEAA*
Ga0187877_12370871	3300017931	Peatland	MVRRKLTEAANHFGGVLATARWQGRIKQLEKPSSSQREISGEGPTYNRQHREKEGWREG
Ga0187854_100627612	3300017938	Peatland	MVRRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREISGEGPTYNRQHREKEGWREGGGGASSSGEAA
Ga0181520_109250261	3300017988	Bog	KLDEGSMVRRKLTEATNHFGGVLATARWRGHIKQLEKPSSSQREISGEGPTYNRQHREKEGWREGGGGASSSGEAA
Ga0187816_100547792	3300017995	Freshwater Sediment	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSEETA
Ga0187870_10341052	3300017998	Peatland	MVRRKLTEAANHFGGVLATARWQGRIKQLEKPSSSQREISGEGPTYNRQHREKEGWREGGGGASSSGEAA
Ga0187868_11731291	3300018002	Peatland	RKIAPQRPKSSELDEGSMVRRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREISGEGPTYNRQHREKEGWREGGGGASSSGEAA
Ga0187864_101008292	3300018022	Peatland	MVRRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREISGEGPAYNRQHREKEGWREGGGGASSSGEAA
Ga0187881_103663411	3300018024	Peatland	SELDEGSMVRRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREISGEGPTYNRQHREKEGWREGGGGASSSGEAA
Ga0182025_10998652	3300019786	Permafrost	MARRKLTETANHFGGVLATARWQGRIKQLEKPSSTQREIFGAGPTYNRQHREKEGWREGGGGASSSKEAA
Ga0210407_1000535114	3300020579	Soil	MERRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSEEAA
Ga0210407_101677532	3300020579	Soil	ERRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGGASSSVETA
Ga0210407_109899331	3300020579	Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSEEAA
Ga0210399_101050122	3300020581	Soil	MERRKLTETANHFGGVLATARWQGHIKQLEKPSSSQQEISGAGLTYNRQHREKEGWREGGGGASSSEEAA
Ga0210399_104472432	3300020581	Soil	QLDEGSMERRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGGASSSVETA
Ga0210399_108564971	3300020581	Soil	RKLTETANHFGGVLATARWQGHIKQLEKPSSSQGEITGADLTYNRQHREKEGWREGGGGASSSGETA
Ga0210395_100206851	3300020582	Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQGEITGADLTYNRQHREKEGWREGGGGASSSGETA
Ga0210393_107576992	3300021401	Soil	MARRKLTEAANHFGGVLAMARWQGHIKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRANSSEEAA
Ga0210389_101440672	3300021404	Soil	ERRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSEEAA
Ga0210387_111743791	3300021405	Soil	ELDEGSMERRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSEEAA
Ga0210402_109792712	3300021478	Soil	MARRKLTEAANHFGGVLAMARWQGHIKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRANSSEEAAQWPWSEGALLFVMTL
Ga0242663_10983911	3300022523	Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGG
Ga0242660_11657101	3300022531	Soil	MERRKLTETANHFGGVLATARWQGHIKQLEKPSSPQSEIFGAGPTYHRGHREMEGWREGGGRACSSDEA
Ga0242653_10442111	3300022712	Soil	MERRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGRASSSGET
Ga0208478_10765042	3300025475	Arctic Peat Soil	MARRKLTEAANHFGGVLATARWQGRIKQLEKPSLSQREIAGADLTYNRQHREKERWREGGGRASSSEETA
Ga0208587_10722991	3300025484	Arctic Peat Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGAGPTYNRQHREREGWREGGGG
Ga0208584_10284381	3300025533	Arctic Peat Soil	MVCRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREIAGADLTYNRQHREKERWREGGGRASSSEETA
Ga0207665_100661913	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGGASSSEEAA
Ga0207641_104404201	3300026088	Switchgrass Rhizosphere	MVRRKLTGTANHFGGVLATARWQGHIKQLEKPSSPQSEISGADPTYNRGHREVEGWREGGGWACSSDEAA
Ga0257179_10424192	3300026371	Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSPQREISGAGLTYNRQHREKEGWREGGGRASSSGETA
Ga0208575_10186102	3300026920	Soil	MAHRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGRASSSGETA
Ga0207852_10316951	3300026959	Tropical Forest Soil	GGVLAMARWQGHIKQLEKPSSPQGEIAGADLTYNRQHREKEGWREGVGGANSSEEAA
Ga0208095_10150842	3300027104	Forest Soil	MARRKLTEAANHFGGVLAMARWQGHIKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRA
Ga0207944_10070391	3300027105	Forest Soil	TEAANHFGGVLAMARWQGHIKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRANSSEEAA
Ga0209418_10005685	3300027371	Forest Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQREISGVGLTYNRQHREKEGWREGGGGASSSEETA
Ga0209219_11306492	3300027565	Forest Soil	MVRRKLTETANHFGGVLAAARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGRASS
Ga0209693_100094661	3300027855	Soil	MARRKLTETANHFGGVLATARWQGHIKQLEKPSSSQGEISGADLTYNRQHREKEGWREGGGGASSSGETA
Ga0209415_102957312	3300027905	Peatlands Soil	MARRKLTEAANHFGGVLATARWQGRIKQLEKPSLSQREIAGADLTYNRQHREKEGWREGGGRASSSEETA
Ga0075386_121397142	3300030916	Soil	MVRRKLTEAANHFGGVLATARWQGHVKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRANSSEEAA
Ga0170834_1005463782	3300031057	Forest Soil	MARRKLTEAANHFGGVLATARWQGHVKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGRANSSEEAA
Ga0170823_104939411	3300031128	Forest Soil	MARRKLTEAANHFGGVLAMARWQGHIKQLEKPSSPQGEIAGADPTYNRQHREKEGWREGVGGANSSEEAA
Ga0170818_1066000691	3300031474	Forest Soil	MARRKLTEAANHFGGVLAMARWQGHIKQLEKPSSPQEEIAGADPTYNRQHREKEGWRE
Ga0310915_105409651	3300031573	Soil	MGRRKLTEAANHFGGVLATARWQGRIKQLEKPSLPQREIAGADLTYNRQDREKERWREGGGGASSSEETA
Ga0318529_104065261	3300031792	Soil	MSPQRLNPSELGESSMARRKLTEAANHFGGVLATARWQGRIKQLEKPSLPQREIAGADLTYNRQDREKERWREGGGGASSSEETA
Ga0311301_106400382	3300032160	Peatlands Soil	MVRRKLTEAANHFGGVLATARWQGHIKQLEKPSSSQGEISGEGPTYNRQHREKEGWREGGGGASSSGEAA
Ga0307470_100179513	3300032174	Hardwood Forest Soil	MVRRKLTETANHFGGVLATARWQGHIKQLEKPSSSRREISGAGLTYNRQHREKEGWREGGGGASSSGETA
Ga0307471_1015472651	3300032180	Hardwood Forest Soil	MERRKLTETANHFGGVIATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSEEAA
Ga0307472_1009613551	3300032205	Hardwood Forest Soil	HFGGVLATARWQGHIKQLEKPSSSQREISGAGLTYNRQHREKEGWREGGGGASSSEEAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103365

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences