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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F103332 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 101 |
| Average Sequence Length | 94 residues |
| Representative Sequence | MSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRAESR |
| Number of Associated Samples | 89 |
| Number of Associated Scaffolds | 101 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 67.33 % |
| % of genes near scaffold ends (potentially truncated) | 45.54 % |
| % of genes from short scaffolds (< 2000 bps) | 84.16 % |
| Associated GOLD sequencing projects | 83 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (53.465 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.901 % of family members) |
| Environment Ontology (ENVO) | Unclassified (49.505 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (58.416 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 57.30% β-sheet: 1.12% Coil/Unstructured: 41.57% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 101 Family Scaffolds |
|---|---|---|
| PF12697 | Abhydrolase_6 | 9.90 |
| PF01594 | AI-2E_transport | 4.95 |
| PF00614 | PLDc | 3.96 |
| PF03458 | Gly_transporter | 3.96 |
| PF13442 | Cytochrome_CBB3 | 1.98 |
| PF13091 | PLDc_2 | 1.98 |
| PF03098 | An_peroxidase | 0.99 |
| PF00903 | Glyoxalase | 0.99 |
| PF03176 | MMPL | 0.99 |
| PF01471 | PG_binding_1 | 0.99 |
| PF01935 | DUF87 | 0.99 |
| PF06772 | LtrA | 0.99 |
| PF03100 | CcmE | 0.99 |
| PF04545 | Sigma70_r4 | 0.99 |
| PF00196 | GerE | 0.99 |
| PF07690 | MFS_1 | 0.99 |
| PF13418 | Kelch_4 | 0.99 |
| COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
|---|---|---|---|
| COG0628 | Predicted PurR-regulated permease PerM | General function prediction only [R] | 4.95 |
| COG1502 | Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase | Lipid transport and metabolism [I] | 3.96 |
| COG2860 | Uncharacterized membrane protein YeiH | Function unknown [S] | 3.96 |
| COG1033 | Predicted exporter protein, RND superfamily | General function prediction only [R] | 0.99 |
| COG2332 | Cytochrome c biogenesis protein CcmE | Posttranslational modification, protein turnover, chaperones [O] | 0.99 |
| COG2409 | Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily | General function prediction only [R] | 0.99 |
| COG4292 | Low temperature requirement protein LtrA (function unknown) | Function unknown [S] | 0.99 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 53.47 % |
| Unclassified | root | N/A | 46.53 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300000363|ICChiseqgaiiFebDRAFT_11033329 | All Organisms → cellular organisms → Bacteria | 1211 | Open in IMG/M |
| 3300000891|JGI10214J12806_10863314 | Not Available | 994 | Open in IMG/M |
| 3300000953|JGI11615J12901_11217622 | Not Available | 626 | Open in IMG/M |
| 3300000956|JGI10216J12902_101418476 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2567 | Open in IMG/M |
| 3300003987|Ga0055471_10001645 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 3558 | Open in IMG/M |
| 3300004013|Ga0055465_10005623 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 2220 | Open in IMG/M |
| 3300004114|Ga0062593_100284274 | Not Available | 1396 | Open in IMG/M |
| 3300004114|Ga0062593_103553652 | Not Available | 501 | Open in IMG/M |
| 3300004156|Ga0062589_100032744 | All Organisms → cellular organisms → Bacteria | 2677 | Open in IMG/M |
| 3300004157|Ga0062590_100118152 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1731 | Open in IMG/M |
| 3300004643|Ga0062591_100044473 | All Organisms → cellular organisms → Bacteria | 2472 | Open in IMG/M |
| 3300005329|Ga0070683_100024168 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 5439 | Open in IMG/M |
| 3300005329|Ga0070683_100329851 | Not Available | 1453 | Open in IMG/M |
| 3300005334|Ga0068869_100110210 | Not Available | 2093 | Open in IMG/M |
| 3300005339|Ga0070660_100068728 | All Organisms → cellular organisms → Bacteria | 2762 | Open in IMG/M |
| 3300005340|Ga0070689_101326044 | Not Available | 649 | Open in IMG/M |
| 3300005341|Ga0070691_10109116 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1382 | Open in IMG/M |
| 3300005345|Ga0070692_10248123 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1064 | Open in IMG/M |
| 3300005345|Ga0070692_10366212 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 900 | Open in IMG/M |
| 3300005356|Ga0070674_101291418 | Not Available | 650 | Open in IMG/M |
| 3300005444|Ga0070694_100710507 | Not Available | 818 | Open in IMG/M |
| 3300005455|Ga0070663_101021109 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. DSM 110486 | 720 | Open in IMG/M |
| 3300005456|Ga0070678_100475516 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1099 | Open in IMG/M |
| 3300005459|Ga0068867_100139962 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1890 | Open in IMG/M |
| 3300005466|Ga0070685_10409606 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 941 | Open in IMG/M |
| 3300005530|Ga0070679_100199993 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1965 | Open in IMG/M |
| 3300005535|Ga0070684_100275156 | Not Available | 1542 | Open in IMG/M |
| 3300005543|Ga0070672_101575794 | Not Available | 589 | Open in IMG/M |
| 3300005577|Ga0068857_101901416 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 583 | Open in IMG/M |
| 3300005578|Ga0068854_100360256 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1193 | Open in IMG/M |
| 3300005615|Ga0070702_100790644 | Not Available | 733 | Open in IMG/M |
| 3300005616|Ga0068852_101141505 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. DSM 110486 | 800 | Open in IMG/M |
| 3300005616|Ga0068852_101422404 | Not Available | 716 | Open in IMG/M |
| 3300005617|Ga0068859_100599012 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1195 | Open in IMG/M |
| 3300005937|Ga0081455_10035799 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 4430 | Open in IMG/M |
| 3300005937|Ga0081455_10098173 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 2358 | Open in IMG/M |
| 3300005937|Ga0081455_10637183 | Not Available | 689 | Open in IMG/M |
| 3300006358|Ga0068871_101920707 | Not Available | 563 | Open in IMG/M |
| 3300006573|Ga0074055_11644509 | Not Available | 516 | Open in IMG/M |
| 3300006579|Ga0074054_11943868 | All Organisms → cellular organisms → Bacteria | 989 | Open in IMG/M |
| 3300006581|Ga0074048_13273953 | Not Available | 661 | Open in IMG/M |
| 3300006605|Ga0074057_12206508 | Not Available | 897 | Open in IMG/M |
| 3300006969|Ga0075419_10565670 | Not Available | 796 | Open in IMG/M |
| 3300009098|Ga0105245_10041177 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 4118 | Open in IMG/M |
| 3300009098|Ga0105245_10070902 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3164 | Open in IMG/M |
| 3300009174|Ga0105241_11117300 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 743 | Open in IMG/M |
| 3300009176|Ga0105242_10928163 | Not Available | 873 | Open in IMG/M |
| 3300009545|Ga0105237_10554515 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1156 | Open in IMG/M |
| 3300009551|Ga0105238_11388199 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 729 | Open in IMG/M |
| 3300010400|Ga0134122_10505994 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1094 | Open in IMG/M |
| 3300011119|Ga0105246_12170354 | Not Available | 540 | Open in IMG/M |
| 3300012914|Ga0157297_10070486 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 975 | Open in IMG/M |
| 3300012943|Ga0164241_10735015 | Not Available | 717 | Open in IMG/M |
| 3300012951|Ga0164300_10617928 | Not Available | 642 | Open in IMG/M |
| 3300012958|Ga0164299_10381278 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 899 | Open in IMG/M |
| 3300012960|Ga0164301_10938520 | Not Available | 675 | Open in IMG/M |
| 3300012984|Ga0164309_11713488 | Not Available | 539 | Open in IMG/M |
| 3300012985|Ga0164308_10024870 | All Organisms → cellular organisms → Bacteria | 3561 | Open in IMG/M |
| 3300012988|Ga0164306_10875738 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 730 | Open in IMG/M |
| 3300012989|Ga0164305_10950542 | Not Available | 726 | Open in IMG/M |
| 3300013104|Ga0157370_10827730 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales | 842 | Open in IMG/M |
| 3300013104|Ga0157370_11374829 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 636 | Open in IMG/M |
| 3300013307|Ga0157372_12369698 | Not Available | 610 | Open in IMG/M |
| 3300013308|Ga0157375_11933462 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 701 | Open in IMG/M |
| 3300014301|Ga0075323_1003843 | All Organisms → cellular organisms → Bacteria | 2251 | Open in IMG/M |
| 3300014311|Ga0075322_1008654 | All Organisms → cellular organisms → Bacteria | 1924 | Open in IMG/M |
| 3300014326|Ga0157380_10372946 | Not Available | 1344 | Open in IMG/M |
| 3300014745|Ga0157377_10122773 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1576 | Open in IMG/M |
| 3300015374|Ga0132255_105665923 | Not Available | 528 | Open in IMG/M |
| 3300017792|Ga0163161_10708766 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 839 | Open in IMG/M |
| 3300020082|Ga0206353_10590208 | Not Available | 708 | Open in IMG/M |
| 3300020610|Ga0154015_1065864 | All Organisms → cellular organisms → Bacteria | 963 | Open in IMG/M |
| 3300022467|Ga0224712_10049845 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1624 | Open in IMG/M |
| 3300022883|Ga0247786_1025734 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1129 | Open in IMG/M |
| 3300022883|Ga0247786_1056058 | Not Available | 804 | Open in IMG/M |
| 3300022898|Ga0247745_1039000 | Not Available | 727 | Open in IMG/M |
| 3300022901|Ga0247788_1088825 | Not Available | 603 | Open in IMG/M |
| 3300022915|Ga0247790_10018302 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1483 | Open in IMG/M |
| 3300023102|Ga0247754_1111380 | Not Available | 666 | Open in IMG/M |
| 3300024055|Ga0247794_10024757 | All Organisms → cellular organisms → Bacteria | 1516 | Open in IMG/M |
| 3300025552|Ga0210142_1000015 | All Organisms → cellular organisms → Bacteria | 47277 | Open in IMG/M |
| 3300025556|Ga0210120_1003122 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 3637 | Open in IMG/M |
| 3300025559|Ga0210087_1010330 | All Organisms → cellular organisms → Bacteria | 1983 | Open in IMG/M |
| 3300025567|Ga0210076_1025288 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1268 | Open in IMG/M |
| 3300025912|Ga0207707_10285466 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1429 | Open in IMG/M |
| 3300025912|Ga0207707_10840907 | Not Available | 762 | Open in IMG/M |
| 3300025917|Ga0207660_10999508 | Not Available | 682 | Open in IMG/M |
| 3300025919|Ga0207657_10333852 | All Organisms → cellular organisms → Bacteria | 1197 | Open in IMG/M |
| 3300025921|Ga0207652_11162917 | Not Available | 673 | Open in IMG/M |
| 3300025935|Ga0207709_11447286 | Not Available | 569 | Open in IMG/M |
| 3300025942|Ga0207689_10472390 | Not Available | 1049 | Open in IMG/M |
| 3300025942|Ga0207689_10921281 | Not Available | 737 | Open in IMG/M |
| 3300025942|Ga0207689_11041255 | Not Available | 690 | Open in IMG/M |
| 3300026041|Ga0207639_11783128 | Not Available | 576 | Open in IMG/M |
| 3300026089|Ga0207648_10420737 | Not Available | 1213 | Open in IMG/M |
| 3300026095|Ga0207676_12304488 | Not Available | 536 | Open in IMG/M |
| 3300026142|Ga0207698_10235862 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1664 | Open in IMG/M |
| 3300028592|Ga0247822_11787600 | Not Available | 524 | Open in IMG/M |
| 3300028802|Ga0307503_10769684 | Not Available | 547 | Open in IMG/M |
| 3300031562|Ga0310886_10380085 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. DSM 110486 | 828 | Open in IMG/M |
| 3300031858|Ga0310892_11256388 | Not Available | 529 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 9.90% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 7.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 6.93% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 5.94% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 5.94% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 5.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.95% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.95% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 4.95% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.96% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 2.97% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.97% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 2.97% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.97% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.97% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.97% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 1.98% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.98% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.99% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.99% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.99% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.99% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.99% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000891 | Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil | Environmental | Open in IMG/M |
| 3300000953 | Soil microbial communities from Great Prairies - Kansas Corn soil | Environmental | Open in IMG/M |
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300003987 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 | Environmental | Open in IMG/M |
| 3300004013 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
| 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
| 3300006573 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006579 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006605 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
| 3300012943 | Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY) | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Host-Associated | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014301 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1 | Environmental | Open in IMG/M |
| 3300014311 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1 | Environmental | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020610 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022883 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4 | Environmental | Open in IMG/M |
| 3300022898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5 | Environmental | Open in IMG/M |
| 3300022901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4 | Environmental | Open in IMG/M |
| 3300022915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4 | Environmental | Open in IMG/M |
| 3300023102 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5 | Environmental | Open in IMG/M |
| 3300024055 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6 | Environmental | Open in IMG/M |
| 3300025552 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025556 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025559 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025567 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
| 3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiFebDRAFT_110333292 | 3300000363 | Soil | MSSRRDVDVAGVLVQAHHVPDLITRLHRAGYPFVADKVARALGTRTIHVAFGSAEREALVRAVADEPPQFSELYRVLLREIQDLRAADL* |
| JGI10214J12806_108633142 | 3300000891 | Soil | VAGVTVEARHLPELITRLRASGYPFVAEKVERALGLRTVHVGFDAAEREAIVRAVDDKPPHFSELYRVLRAEIRYKRQGES* |
| JGI11615J12901_112176222 | 3300000953 | Soil | MSWRRDVDVAGVTLEARHIPELITRLRLAGHPFVAEKVERALGLRTVHVTFDAAEREAIVDVVADRSREFSELYRVLRAEIRRRPEPS* |
| JGI10216J12902_1014184762 | 3300000956 | Soil | VWWRRDVNVAGVTVSARHVPELITRLRAAGYPFVAEKVERALGLRTVHVGFDAAEREAIVRAVDDKPPYFSELYRVLRAEIQRKRQGEP* |
| Ga0055471_100016453 | 3300003987 | Natural And Restored Wetlands | MSLRRDIDLAGVPVQAHHVPELISRLRRRGYPSVAHKVERALSSRTVHVAFNAAEREAIVRAVADRPRQFSELYDVLRGEIKRRRTQSRHESF* |
| Ga0055465_100056234 | 3300004013 | Natural And Restored Wetlands | LAGVPVQAHHVPELISRLRRRGYPSVAHKVERALSSRTVHVAFNAAEREAIVRAVADRPRQFSELYDVLRGEIKRRRTQSRHESF* |
| Ga0062593_1002842742 | 3300004114 | Soil | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0062593_1035536521 | 3300004114 | Soil | LVLSRRRPRKTREWVFSVADLARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0062589_1000327443 | 3300004156 | Soil | ARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0062590_1001181521 | 3300004157 | Soil | MRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0062591_1000444733 | 3300004643 | Soil | GLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0070683_1000241684 | 3300005329 | Corn Rhizosphere | MSLRRDVDVAGVRLQARHVPELIGRLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRAESR* |
| Ga0070683_1003298513 | 3300005329 | Corn Rhizosphere | MSLRRDVSVAGVRIDARHAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAERH* |
| Ga0068869_1001102103 | 3300005334 | Miscanthus Rhizosphere | VSWRRDVNVAGVTVEARHLPELITRLRASGYPFVAEKVERALGLRTVHVGFDAAEREAIVRAVDDKPPHFSELYRVLRAEIRYKRQGES* |
| Ga0070660_1000687283 | 3300005339 | Corn Rhizosphere | MRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADSPARFSELYEVLIGEIKRRRARSR* |
| Ga0070689_1013260442 | 3300005340 | Switchgrass Rhizosphere | MSLRRDVSVAGVRIDARHAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDALRGELKRQRAERH* |
| Ga0070691_101091161 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQT |
| Ga0070692_102481232 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | RMSLRRDVDVAGVPIQAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0070692_103662121 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | MRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRAESR* |
| Ga0070674_1012914181 | 3300005356 | Miscanthus Rhizosphere | MSLRRDVDVAGVPIQAHHVPELIGRLRRRGYPTVAHKVERALASRTIHVAFNPAEREAIVRAVVDRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0070694_1007105072 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MSLRRDVDVAGVPIQAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0070663_1010211091 | 3300005455 | Corn Rhizosphere | SLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0070678_1004755162 | 3300005456 | Miscanthus Rhizosphere | MSLRRDVSVAGVRIDARLAPQLIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAERH* |
| Ga0068867_1001399622 | 3300005459 | Miscanthus Rhizosphere | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVVDRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0070685_104096061 | 3300005466 | Switchgrass Rhizosphere | MRDQLSMSLRRDVDVAGVPEQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0070679_1001999933 | 3300005530 | Corn Rhizosphere | MSLRRDVDVAGVRLQARHVPELIGRLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADSPARFSELYEVLIGEIKRRRAESR* |
| Ga0070684_1002751562 | 3300005535 | Corn Rhizosphere | VSWRRDVNVAGVTVEARHLPELITRLRASGYPFVAEKVERALGLRTVHVAFDAAEREAIVHAVYDKPPHFSELYRALRAEIQRNRQGES* |
| Ga0070672_1015757941 | 3300005543 | Miscanthus Rhizosphere | SLRRDVSVAGVRVDARLAPELIARLRRQGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAERH* |
| Ga0068857_1019014162 | 3300005577 | Corn Rhizosphere | MSLRRDVDVAGVRLQARHVPELIGQLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLI |
| Ga0068854_1003602562 | 3300005578 | Corn Rhizosphere | MRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGE |
| Ga0070702_1007906442 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | VCRGKPFAMSLRRDVIVAGVRIDARLAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAERH* |
| Ga0068852_1011415051 | 3300005616 | Corn Rhizosphere | SVARTRYPPRMSLRRDVDVAGVPIQAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0068852_1014224041 | 3300005616 | Corn Rhizosphere | VRLQARHVPELIGRLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRAESR* |
| Ga0068859_1005990122 | 3300005617 | Switchgrass Rhizosphere | VADLARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRAR |
| Ga0081455_100357994 | 3300005937 | Tabebuia Heterophylla Rhizosphere | VSWRRDVDVAGVPVAAHDVPELIRRLRERGAPHVAVKVERALGTRTVHVVFSEAEREAILRAVDDRPREFSELYAALVHELERRRKRAD* |
| Ga0081455_100981732 | 3300005937 | Tabebuia Heterophylla Rhizosphere | LPLSRDIDVAGVRVEARHIPELIKRLSRVGYPSVANKVERALATRTIRVEFNAAERAVIARAVVDRPPQFSELYRALKDENKRRRSEGLT* |
| Ga0081455_106371832 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MSLRRDVDVAGVPVLAQHMPELIDRVRRRGYPSVAHKLERALSARTVQVTFNDAEREVIVRALADRPRQFSELHEVLYAEVKRKRRRL* |
| Ga0068871_1019207072 | 3300006358 | Miscanthus Rhizosphere | AGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATDREVIARAVADRPERFSELYEVLIGEIKRPRARSR* |
| Ga0074055_116445092 | 3300006573 | Soil | MSLRRDVSVAGVRVDARLAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHKAPQFSELYDVLRGELKRQRAERH* |
| Ga0074054_119438682 | 3300006579 | Soil | MLTSSLRRDVSVAGVRVDARLAPELIARLRRRGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHKAPQFSELYDVLRGELKRQRAERH* |
| Ga0074048_132739532 | 3300006581 | Soil | MFGAVFIGEPFAMSLRRDVSVAGVRVDARLAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAER |
| Ga0074057_122065082 | 3300006605 | Soil | MSLRRDVSVAGVRIDARLAPELIARLRRKGYPSVAAKVEQAVGLRTIHVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAERH* |
| Ga0075419_105656702 | 3300006969 | Populus Rhizosphere | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRH |
| Ga0105245_100411771 | 3300009098 | Miscanthus Rhizosphere | AHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0105245_100709026 | 3300009098 | Miscanthus Rhizosphere | VSWRRDVNVAGVTVEARHLPELITRLRASGYPFVAEKVERALGLRTVHVGFDAAEREAIVRAVDDKPPHFSELYRVLRAEI |
| Ga0105241_111173001 | 3300009174 | Corn Rhizosphere | VFSVADLARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRARSR* |
| Ga0105242_109281631 | 3300009176 | Miscanthus Rhizosphere | KTREWVFSVADVARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0105237_105545152 | 3300009545 | Corn Rhizosphere | VFSVADLARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0105238_113881991 | 3300009551 | Corn Rhizosphere | MSLRRDVSVAGVRIDARHAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRPERH* |
| Ga0134122_105059941 | 3300010400 | Terrestrial Soil | MSLRRDVDVAGVPIQAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVVDRPRQFSELYDVLREEVKRRRTQTRHESF* |
| Ga0105246_121703541 | 3300011119 | Miscanthus Rhizosphere | VSWRRDVNVAGVTVEARHLPELITRLRASGYPFVAEKVERALGLRTVHVGFDAAEREAIVRAVDDKPPHFSELYR |
| Ga0157297_100704862 | 3300012914 | Soil | MSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0164241_107350152 | 3300012943 | Soil | MRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPAVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0164300_106179281 | 3300012951 | Soil | MVGRCTSGATAPVTHPPDVGVWSDVCRGKPFAMSLRRDVMVAGVRIDARLAPELIARLRRKGYPSVAAKVEQAVGLRTIHVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAERH* |
| Ga0164299_103812782 | 3300012958 | Soil | VFTVADLARVHRVALDTVGLAAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0164301_109385201 | 3300012960 | Soil | VLDRIDPAQVAEDPVPDVHVWTPCLQGKPIVMSLRRDVSVAGVRIDARLAPELIARLRRKGYPSVAAKVEQAVGLRTIHVDFNAAEREAIVRSVAQRAPQFSELYDVLRGELKRQRAERH |
| Ga0164309_117134881 | 3300012984 | Soil | MFEPDVCRGKPIVMSLRRDVSVAGVRIDARLAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAQRAPQFSELYDVLRGELKRQRAERH* |
| Ga0164308_100248703 | 3300012985 | Soil | VFSVADLARVHRAALDTVGLAAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0164306_108757382 | 3300012988 | Soil | VFSVADLARVHRVALDTVGLAAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0164305_109505421 | 3300012989 | Soil | MSLRRDVSVAGVRIDARLAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGE |
| Ga0157370_108277303 | 3300013104 | Corn Rhizosphere | FSVADVARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALYTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR* |
| Ga0157370_113748291 | 3300013104 | Corn Rhizosphere | MSLRRDVDVAGVRLQARHVPELIGRLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEINRRRA |
| Ga0157372_123696982 | 3300013307 | Corn Rhizosphere | MSLRRDVDVAGVRLQARHVPELIGRLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRARSR* |
| Ga0157375_119334621 | 3300013308 | Miscanthus Rhizosphere | MSLRRDVIVAGVRIDARHAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDV |
| Ga0075323_10038432 | 3300014301 | Natural And Restored Wetlands | MSWRRDVDVAGVPVEAHHVPELITRLRMAGYPFVANKVERALGTRTVHVAFGATEREAIVRVIADRPTQFSELYAVLLRDLERRRAGG* |
| Ga0075322_10086545 | 3300014311 | Natural And Restored Wetlands | MSWRRDVDVAGVPVEAHHVPELITRLRMAGYPFVANKVERALGTRTVHVAFGATEREAIVRVIADKPTQFSELYAVLLRDLERRRAGG* |
| Ga0157380_103729462 | 3300014326 | Switchgrass Rhizosphere | MSLRRDVSVAGVRVDARHAPELIARLRRKDYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAERH* |
| Ga0157377_101227732 | 3300014745 | Miscanthus Rhizosphere | MSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRAESR* |
| Ga0132255_1056659231 | 3300015374 | Arabidopsis Rhizosphere | VAGVRIDPRLAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSLAHRAPQFSELYDVLRGELKRQRAERH* |
| Ga0163161_107087661 | 3300017792 | Switchgrass Rhizosphere | MSLRRDVMVAGVRIDARQAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRDERH |
| Ga0206353_105902081 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | DVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR |
| Ga0154015_10658641 | 3300020610 | Corn, Switchgrass And Miscanthus Rhizosphere | PRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR |
| Ga0224712_100498452 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | VADLARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR |
| Ga0247786_10257343 | 3300022883 | Soil | VPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0247786_10560581 | 3300022883 | Soil | REWVFSVADLARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR |
| Ga0247745_10390001 | 3300022898 | Soil | PCLRREGTREPLNVSWRRDVNVAGVTVEARHLPELITRLRASGYPFVAEKVERALGLRTVHVGFDAAEREAIVRAVDDKPPHFSELYRVLRAEIRYKRQGES |
| Ga0247788_10888251 | 3300022901 | Soil | MSLRRDVDVAGVPIQAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0247790_100183021 | 3300022915 | Soil | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0247754_11113801 | 3300023102 | Soil | SGQVARRSRCPCLSVARTRYPPRMSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0247794_100247574 | 3300024055 | Soil | MRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR |
| Ga0210142_100001546 | 3300025552 | Natural And Restored Wetlands | MSWRRDVDVAGVPVEAHHVPELITRLRMAGYPFVANKVERALGTRTVHVAFGATEREAIVRVIADKPTQFSELYAVLLRDLERRRAGG |
| Ga0210120_10031226 | 3300025556 | Natural And Restored Wetlands | MSWRRDVDVAGVPVEAHHVPELITRLRMAGFPFVANKVERALGTRTVHVAFGATEREAIVRVIADKPTQFSELYAVLLRDLERRRAGG |
| Ga0210087_10103304 | 3300025559 | Natural And Restored Wetlands | MSWRRDVDVAGVPVGAHHVPELITRLRMAGYPFVANKVERALGTRTVHVAFGATEREAIVRVIADRPTQFSELYAVLLRDLERRRAGG |
| Ga0210076_10252883 | 3300025567 | Natural And Restored Wetlands | RNRTRRGLRFARTRYPPPMSLRRDIDLAGVPVQAHHVPELISRLRRRGYPSVAHKVERALSSRTVHVAFNAAEREAIVRAVADRPRQFSELYDVLRGEIKRRRTQSRHESF |
| Ga0207707_102854661 | 3300025912 | Corn Rhizosphere | MSLRRDVDVAGVRLQARHVPELIGRLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRAESR |
| Ga0207707_108409071 | 3300025912 | Corn Rhizosphere | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRR |
| Ga0207660_109995081 | 3300025917 | Corn Rhizosphere | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTGTN |
| Ga0207657_103338522 | 3300025919 | Corn Rhizosphere | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALASRTIHVAFNPAEREAIVRAVVDRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0207652_111629171 | 3300025921 | Corn Rhizosphere | CNMSLRRDVDVAGVRLQARHVPELIGRLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADSPARFSELYEVLIGEIKRRRAESR |
| Ga0207709_114472861 | 3300025935 | Miscanthus Rhizosphere | DVDVAGVRLQARHVPELIGRLRRRGYPSVAHKLERALSTRTVRVEFNAAEREVIARAVADRPARFSELYEVLIGEIKRRRAESR |
| Ga0207689_104723902 | 3300025942 | Miscanthus Rhizosphere | VSWRRDVNVAGVTVEARHLPELITRLRASGYPFVAEKVERALGLRTVHVGFDAAEREAIVRAVDDKPPHFSELYRVLRAEIRYKRQGES |
| Ga0207689_109212812 | 3300025942 | Miscanthus Rhizosphere | RALVLSRRRPRKTREWVFSVADLARVHRAALDTVGLGAPRMRDQLSMSLRRDVDVAGVPVQAQHVPELIGRLRKRGYPSVAHKLERALSTRTVRVEFNATEREVIARAVADRPERFSELYEVLIGEIKRRRARSR |
| Ga0207689_110412552 | 3300025942 | Miscanthus Rhizosphere | MSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVVDRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0207639_117831281 | 3300026041 | Corn Rhizosphere | SVARTRYPPRMSLRRDVDVAGVPIQAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0207648_104207373 | 3300026089 | Miscanthus Rhizosphere | PDVGVWSDVCRGKPFAMSLRRDVMVAGVRVDARLAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRAERH |
| Ga0207676_123044881 | 3300026095 | Switchgrass Rhizosphere | MSLRRDVSVAGVRIDARHAPELIARLRRKGYPSVAAKVERAVGLRTIPVDFNAAEREAIVRSVAHRAPQFSELYDVLRGELKRQRDERH |
| Ga0207698_102358621 | 3300026142 | Corn Rhizosphere | VAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0247822_117876001 | 3300028592 | Soil | MSLRRDVDVAGVPIQAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELY |
| Ga0307503_107696841 | 3300028802 | Soil | MSLRRDVSVAGVRIDARLAPELIARLRRKGYPSVAAKVERAVSLRTIPVDFNAAEREAIVRSVAHRAPQFSEL |
| Ga0310886_103800851 | 3300031562 | Soil | YPPRMSLRRDVDVAGVPIHAHHVPELIGRLRRRGYPTVAHKVERALSSRTIHVAFNPAEREAIVRAVADRPRQFSELYDVLREEVKRRRTQTRHESF |
| Ga0310892_112563881 | 3300031858 | Soil | VSWRRDVNVAGVTVEARHLPELITRLRASGYPFVAEKVERALGLRTVHVGFDAAEREAIVRAVDDKPPHFSELYRV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |