Metagenome / Metatranscriptome Family F103317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103317
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	111 residues
Representative Sequence	TYTEILDNFDIGEYTVDATAVTGGTLSADLITNANGLVVSAVQTADRLFGVQTFTTPVVVTSDSSVFTVSFGVNQASSMWMTSSGVPLNEYQVYAIGSGPFSTFMTVE
Number of Associated Samples	84
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	95.05 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.495 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (26.733 % of family members)
Environment Ontology (ENVO)	Unclassified (60.396 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.069 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.68% Coil/Unstructured: 71.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03413	PepSY	58.42
PF03441	FAD_binding_7	4.95
PF11159	DUF2939	3.96
PF00916	Sulfate_transp	1.98
PF07995	GSDH	0.99
PF00886	Ribosomal_S16	0.99
PF01746	tRNA_m1G_MT	0.99
PF00174	Oxidored_molyb	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0415	Deoxyribodipyrimidine photolyase	Replication, recombination and repair [L]	4.95
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	1.98
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	1.98
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	1.98
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.99
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.99
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.99
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
All Organisms	root	All Organisms	49.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
cellular organisms	root	All Organisms → cellular organisms	49.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	17.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	11.88 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	3.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
unclassified Nitrosomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales	9.90 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
OM43 clade	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	9.90 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Methylophilales bacterium HTCC2181	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	6.93 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3.96 %
beta proteobacterium KB13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → beta proteobacterium KB13	2.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000947\|BBAY92_10028101	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300000949\|BBAY94_10175874	Not Available	578	Open in IMG/M
3300001346\|JGI20151J14362_10155213	Not Available	679	Open in IMG/M
3300001348\|JGI20154J14316_10167383	Not Available	572	Open in IMG/M
3300001352\|JGI20157J14317_10129475	Not Available	830	Open in IMG/M
3300001352\|JGI20157J14317_10187268	Not Available	603	Open in IMG/M
3300001355\|JGI20158J14315_10238774	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300002134\|M2t6FKB2_1297014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1223	Open in IMG/M
3300004279\|Ga0066605_10293458	Not Available	599	Open in IMG/M
3300005239\|Ga0073579_1051927	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005837\|Ga0078893_10012022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → beta proteobacterium KB13	5511	Open in IMG/M
3300006029\|Ga0075466_1037903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1471	Open in IMG/M
3300006382\|Ga0075494_1345342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	527	Open in IMG/M
3300006850\|Ga0075491_1542045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	818	Open in IMG/M
3300009071\|Ga0115566_10275466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	999	Open in IMG/M
3300009071\|Ga0115566_10520337	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300009071\|Ga0115566_10756899	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300009193\|Ga0115551_1059336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1855	Open in IMG/M
3300009193\|Ga0115551_1405163	Not Available	586	Open in IMG/M
3300009423\|Ga0115548_1243644	Not Available	553	Open in IMG/M
3300009433\|Ga0115545_1218299	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300009436\|Ga0115008_11300259	Not Available	555	Open in IMG/M
3300009442\|Ga0115563_1297270	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300009442\|Ga0115563_1362787	Not Available	519	Open in IMG/M
3300009445\|Ga0115553_1328250	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300009445\|Ga0115553_1343257	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300009449\|Ga0115558_1439338	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300009472\|Ga0115554_1239657	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300009472\|Ga0115554_1277839	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300009476\|Ga0115555_1465850	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300009498\|Ga0115568_10488537	Not Available	525	Open in IMG/M
3300009505\|Ga0115564_10264292	Not Available	872	Open in IMG/M
3300009508\|Ga0115567_10321559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	965	Open in IMG/M
3300009508\|Ga0115567_10688549	Not Available	613	Open in IMG/M
3300009512\|Ga0115003_10601946	Not Available	641	Open in IMG/M
3300009526\|Ga0115004_10431270	Not Available	780	Open in IMG/M
3300016736\|Ga0182049_1200826	Not Available	686	Open in IMG/M
3300016787\|Ga0182080_1021086	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300017697\|Ga0180120_10444156	Not Available	506	Open in IMG/M
3300017957\|Ga0181571_10475886	Not Available	766	Open in IMG/M
3300017985\|Ga0181576_10676016	Not Available	619	Open in IMG/M
3300018048\|Ga0181606_10228347	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300018415\|Ga0181559_10305573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	886	Open in IMG/M
3300018415\|Ga0181559_10777279	Not Available	509	Open in IMG/M
3300018417\|Ga0181558_10183811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1211	Open in IMG/M
3300019459\|Ga0181562_10146135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → beta proteobacterium KB13	1290	Open in IMG/M
3300020053\|Ga0181595_10250893	Not Available	749	Open in IMG/M
3300020165\|Ga0206125_10097216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1257	Open in IMG/M
3300020165\|Ga0206125_10400292	Not Available	500	Open in IMG/M
3300020173\|Ga0181602_10229831	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300020175\|Ga0206124_10056374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → beta proteobacterium KB13	1709	Open in IMG/M
3300020178\|Ga0181599_1185995	Not Available	847	Open in IMG/M
3300020178\|Ga0181599_1230719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	723	Open in IMG/M
3300020185\|Ga0206131_10271328	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300020194\|Ga0181597_10044866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2836	Open in IMG/M
3300020194\|Ga0181597_10313027	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300020454\|Ga0211548_10638489	Not Available	519	Open in IMG/M
3300021347\|Ga0213862_10151496	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300021365\|Ga0206123_10242134	Not Available	786	Open in IMG/M
3300021375\|Ga0213869_10033061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2803	Open in IMG/M
3300021389\|Ga0213868_10644024	Not Available	548	Open in IMG/M
3300021425\|Ga0213866_10200003	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300021964\|Ga0222719_10763217	Not Available	537	Open in IMG/M
3300022900\|Ga0255771_1273653	Not Available	568	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10360879	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300022921\|Ga0255765_1085205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1691	Open in IMG/M
3300022922\|Ga0255779_1184925	Not Available	920	Open in IMG/M
3300022928\|Ga0255758_10316029	Not Available	657	Open in IMG/M
3300022929\|Ga0255752_10074987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1951	Open in IMG/M
(restricted) 3300022933\|Ga0233427_10192877	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300023116\|Ga0255751_10146271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1394	Open in IMG/M
3300023117\|Ga0255757_10538454	Not Available	501	Open in IMG/M
3300023170\|Ga0255761_10072432	All Organisms → cellular organisms → Bacteria	2255	Open in IMG/M
3300024221\|Ga0228666_1061220	Not Available	756	Open in IMG/M
3300024231\|Ga0233399_1148251	Not Available	501	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10074182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1630	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10241205	Not Available	720	Open in IMG/M
3300024301\|Ga0233451_10347673	Not Available	553	Open in IMG/M
3300024315\|Ga0228618_1066764	Not Available	601	Open in IMG/M
3300025668\|Ga0209251_1182375	Not Available	522	Open in IMG/M
3300025680\|Ga0209306_1220207	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300025690\|Ga0209505_1143230	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300025694\|Ga0209406_1118946	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300025705\|Ga0209374_1012039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	4576	Open in IMG/M
3300025712\|Ga0209305_1115889	Not Available	843	Open in IMG/M
3300025806\|Ga0208545_1048260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1273	Open in IMG/M
3300025849\|Ga0209603_1260181	Not Available	626	Open in IMG/M
3300025849\|Ga0209603_1308203	Not Available	550	Open in IMG/M
3300025869\|Ga0209308_10345782	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300025869\|Ga0209308_10444069	Not Available	509	Open in IMG/M
3300025874\|Ga0209533_1214170	Not Available	800	Open in IMG/M
3300025886\|Ga0209632_10285982	Not Available	828	Open in IMG/M
3300025890\|Ga0209631_10149659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1260	Open in IMG/M
3300025890\|Ga0209631_10446811	Not Available	589	Open in IMG/M
3300025892\|Ga0209630_10352232	Not Available	652	Open in IMG/M
3300025894\|Ga0209335_10200541	Not Available	916	Open in IMG/M
3300026500\|Ga0247592_1088872	Not Available	747	Open in IMG/M
3300028008\|Ga0228674_1227906	Not Available	588	Open in IMG/M
3300028196\|Ga0257114_1254836	Not Available	624	Open in IMG/M
3300028196\|Ga0257114_1291557	Not Available	566	Open in IMG/M
3300031851\|Ga0315320_10782593	Not Available	601	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.02%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.02%
Algae	Host-Associated → Algae	1.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.03%
Green Algae	Host-Associated → Algae → Green Algae	1.98%
Unclassified	Environmental → Aquatic → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	31.68%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	25.74%
Coastal	Environmental → Aquatic → Marine → Coastal	14.85%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	10.89%
Inlet	Environmental → Aquatic → Marine → Inlet	5.94%
Oceanic	Environmental → Aquatic → Marine → Oceanic	3.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.96%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	1.98%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	31.68%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	23.76%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.85%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	10.89%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.98%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	26.73%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	23.76%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	10.89%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	8.91%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	4.95%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.96%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.96%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.97%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.97%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.98%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	1.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.99%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.99%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.99%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.99%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.99%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.99%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300002134	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t6FKB2 (101f)	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006382	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006850	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_RNA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300016736	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011508BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016787	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071411AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022900	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300022922	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300022933 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_100_MG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300024221	Seawater microbial communities from Monterey Bay, California, United States - 80D	Environmental	Open in IMG/M
3300024231	Seawater microbial communities from Monterey Bay, California, United States - 43D	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024301	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)	Environmental	Open in IMG/M
3300024315	Seawater microbial communities from Monterey Bay, California, United States - 20D	Environmental	Open in IMG/M
3300025668	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025690	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026500	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY92_100281011	3300000947	Macroalgal Surface	TPVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVVVTSDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFATFMDVE*
BBAY94_101758743	3300000949	Macroalgal Surface	TLSADLITNANGQVVGAVQTADRLFGVQTFTTPVVVTSDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFATFMDVE*
JGI20151J14362_101552131	3300001346	Pelagic Marine	LDQFDVNDFEEGPIAVTDGTLSADLITAAAGTVVTASNTADRLFGVQTFTTPVEVTPSSSVFTVSFGVNQASSMWFFEDLTKGANQYQVYSIGSGPFSTSMAVE*
JGI20154J14316_101673831	3300001348	Pelagic Marine	YSSDSDNSGWTNPSPLVECGDSGGTAGTYGELLDQFSPDEYAVEAVPVTGGTLSADLITDANGLVVTTPVTADRLFGVQTFTTPVVISPSSTVFTVSFGVNQASSLWYYEDLSLGANQYQVYAIGSGPFSTSMTAN*
JGI20157J14317_101294751	3300001352	Pelagic Marine	YDTGPFPVESGTLSADLITDASKRLVNADKTADRLFGVQTFTSSAIVNSDSSLLTVSFGVNQASGMWMENQGNPNEYNARAIGSGPFSTYMTVE*
JGI20157J14317_101872681	3300001352	Pelagic Marine	SADLIKEDGLLATTPQSADTLFGVQAFTTPVVVTPSSSVFTVSFGVNQASSMWFYEDIGRGNPNQYQVFAIGSGPFSTFMSVD*
JGI20158J14315_102387742	3300001355	Pelagic Marine	DYSEDAIAVTGGTISADLITNSNGLVVTEPLIADRLFGVQTFTTPVVVTSDSTLFTVSFGVXQASSMWMTSGGVPANEYQVYAIGSGPFSTFMSVE*
M2t6FKB2_12970141	3300002134	Marine	NYCWTLDSSAYDSQSNGAGWENPSPLAECGGAGGTAGIYNATLDQFDVGQYTAGPISVTGGTLSADLITDANGLLVTAIRTADRLFGVQTFTTPIIVTTDSSLFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE*
Ga0066605_102934581	3300004279	Marine	TKEVTSYSSEAEDWEENTSLVECGDAGGTAGTYTEILDNFDRDVYTVDATPVTGGTLSADLITNANGQVVGAVEIADRLFGIQTFTTPVVVTSDSSVFTVSFGVNQASSLWMTDQGSRIDEYEVYAIGSGPFSTFMTVE*
Ga0073579_10519272	3300005239	Marine	TEILDAFDTDDYSEDAIAVTGGTISADLITNADGLLVTADETADRLFGVQTFTTPVEVTSSSSVFTVSFGVNQASSMWMADEGSIDEYDVYAIGSGPFSTFMTVE*
Ga0078893_100120224	3300005837	Marine Surface Water	GTAGTYVETLDQFDVGEFTAGPISVTGGTLSADLITDADGLLVIGPDSADRLFGVQTFSSPVVVTSDSSVFTVSFGVNQASSLWMTDQGSIDEYEVYAIGSGPFSTFMTVD*
Ga0075466_10379034	3300006029	Aqueous	GTLSADLITDANGLLVTAIRTADRLFGVQTFTTPIIVTTDSSLFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE*
Ga0075494_13453421	3300006382	Aqueous	LITDASGLLVTANKTADRLFGVQTFTTPIIVTTDSSLFTVSFGVNQASSIWMTDEGADNEYDVYAIGSGPFSTFMTVE*
Ga0075491_15420451	3300006850	Aqueous	NGTLSADLITDANGLLVTANKTADRLFGVQTFTTPIIVTTDSSLFTVSFGVNQASSIWMTDEGAANEYDVYAIGSGPFSTFMTVE*
Ga0115566_102754661	3300009071	Pelagic Marine	TAGPISVTGGTLSADLITDANGLLVTAKTTADRLFGVQTFTTPIIVTTDSSLFTVSFGVNQASSIWMTDEGAANEYDVYAIGSGPFSTFMTVE*
Ga0115566_105203372	3300009071	Pelagic Marine	GGAGGTAGTYTEILDAFDTDDYSEDAIPVTGGTISADLIANSDGRVVGAVETADRLFGVQTFTTPVVVTPGSSVFTVSFGVNQASSLWFYEDTTKGANQYQVYAIGSGPFATFMSVE*
Ga0115566_107568991	3300009071	Pelagic Marine	DQFGPSEYTVEATPVTGGTLSADLITNASGLLVTAPETADRLFGVQIFTTPVVVASDTTVFTVSFGVNQASSMWYYEDLGLGANQYQVYAIGSGPFSTFMTVE*
Ga0115551_10593363	3300009193	Pelagic Marine	SETWDDPTVYVECGGAGGTAGTYTEILDNFDTEDYSEDAIAVTGGTISADLITNSNGLVVTAPLIADRLFGLQTFTTPVVVTTGSSLFTVSFGVNQASSMWMTSDGVPTNEYQVYAIGSGPFSTFMSVE*
Ga0115551_14051632	3300009193	Pelagic Marine	GTTLVECGGAGGTAGTYTEILDNFDTNDYQEDGIAVTGGTISADLITSANGLVATAAKTADRLFGLQTFSSPVVVTTGSSLFTVSFGVNQASSMWMTSGGVPANEYQVYAIGSGPFSTFMTVE*
Ga0115548_12436442	3300009423	Pelagic Marine	EGGTLSADLITDADGLLVIGPDSADRLFGVQTFSSPVVVTSDSSVFTVSFGVNQASSLWMTDQGIVDEYEVYAIGSGPFSTFMTVE*
Ga0115545_12182991	3300009433	Pelagic Marine	PIAVTGGTLSADLITAASGMVVSAPNTADRLFGVQTFTSPVVIAPSSTEFTVSFGVNQASSLWYYEDLGLGANQYQVYAIGSGLFSTSMTAN*
Ga0115008_113002591	3300009436	Marine	TYTEKLDQFDVNEYTIDAIAVTGGTLSADLITDANGLVVTAPQTADRLFGVQTFTTPVVIAPSSTVFTVSFGVNQASSLWYYEDTNIGANVYQVYAIGSGPFSTSMSAN*
Ga0115563_12972701	3300009442	Pelagic Marine	VEAAPVTGGTLSADLITDAAGLLVTASKTANRLFGVQTFTTPVVVTSDSTVFTVSFGVNQASSMWYYEDTGEGANQYQVYAIGSGPFSSFMTVE*
Ga0115563_13627871	3300009442	Pelagic Marine	NFDSDDYSEDAIAVTGGTISADLITNSNGLVVTEVLIADRLFGVQTFTTPVVVTSDSTVFTVSFGVNQASSMWMTSEGVPANEYQVYAIGSGPFSTFMTVE*
Ga0115553_13282501	3300009445	Pelagic Marine	TYVETLDQFDSDVYIAGPISVTGGTLSADLITNASGLLVTASKTADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE*
Ga0115553_13432571	3300009445	Pelagic Marine	EILDAFDTDDYSEDAIPVTGGTISADLIANSDGRVVGAVETADRLFGVQTFTTPVVVTTSNSVFSVSFGVNQASSMWMTSGGVPANEYQVYAIGSGPFSTFMSVE*
Ga0115558_14393382	3300009449	Pelagic Marine	IPVTGGTISADLITNSDGRVVGAVETADRLFGVQTFTTPVVVTSSSSVFTVSFGVNQASSMWMSEDPGLPANEYQVYAIGSGPFSTFMSVE*
Ga0115554_12396571	3300009472	Pelagic Marine	NSDSDNSGWADPSPLVECGGASGTAGTYVETLDQFDSDVYIAGPISVTGGTLSADLITNASGLLVTASKTADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE*
Ga0115554_12778391	3300009472	Pelagic Marine	EILDVFGDDDDYSEDAIPVTGGTISADLIVNSTGMVAGAIETADRLFGVQTFTTPVVVTSSSSVFTVSFGVNQASSMWYYEDTSEGANQYQVYAIGSGPFSTFMTVE*
Ga0115555_14658502	3300009476	Pelagic Marine	TGGTISADLITNSDGRVVGAVDTADRLFGVQTFTTPVVVTSDSTVFTVSFGVNQASSMWMTSGGVPANEYQVYAIGSGPFSTFMSVE*
Ga0115568_104885372	3300009498	Pelagic Marine	YVETLDQFDSDVYIAGPISVTGGTLSADLITNASGLLVTASKTADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVFAIGSGPFSTFMTVE*
Ga0115564_102642921	3300009505	Pelagic Marine	TDYSSNSETWDSETTLVECGGAGGTAGTYTEILDNFDSEDYSEDAIAVTGGTISADLITNSNGLVVTEPLIADRLFGVQTFTTPVVVTSDSTVFTVSFGVNQASSMWMTSDGVPTNEYQVYAIGSGPFSTFMSVE*
Ga0115567_103215591	3300009508	Pelagic Marine	SADLITDANGLLVTAKTTADRLFGVQTFTTPIIVTTDSSLFTVSFGVNQASSIWMTDEGAANEYDVYAIGSGPFSTFMTVE*
Ga0115567_106885491	3300009508	Pelagic Marine	FEEGPIAVTDGTLSADLITAAAGTVVTASNTADRLFGVQTFTTPVEVTPSSSVFTVSFGVNQASSMWFFEDLTKGANQYQVYSIGSGPFSTSMAVE*
Ga0115003_106019461	3300009512	Marine	ALDMFGPNAYDTGPFPVESGTLSADLITDASKRLVNADKTADRLLGVQTFTSSVNVNSSSSLFTVSFGVNQASSMWMENQGNPNEYNVRAIGSGPFSSFMTVE*
Ga0115004_104312702	3300009526	Marine	FNEALDMFGPNVYDTGPFPVESGTLSADLITDASKRLVNADKTADRLLGVQTFTSSVNVNPSSSLFTISFGVNQASSMWMENEGNPNEYNVRAIGSGPFSSFMTVE*
Ga0182049_12008262	3300016736	Salt Marsh	YGYILMANTFSIKAKKQFTNTMHTWEAGVSGNYCWTKDATEYSSEAEDWDPEGTTLVECGGAEGTAGTYTEILDNFDTDQYTVDATAVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVISDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFSTFMNVE
Ga0182080_10210863	3300016787	Salt Marsh	AGGTAGTYTEILDNFDTDQYTVDATAVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVISDSSLFTVSFGVNQASSVWMTSTGVPENEYQVYAIGSGPFATFMNVE
Ga0180120_104441562	3300017697	Freshwater To Marine Saline Gradient	TAGTYVETLDQFDSDVYIAGPISVTGGTLSADLITNASGLLVTAPTTADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE
Ga0181571_104758863	3300017957	Salt Marsh	AGTYTEILDNFDTDQYTVDATPVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVISDSSLFTVSFGVNQASSVWMTSTGVPENEYQVYAIGSGPFSTFMNVE
Ga0181576_106760161	3300017985	Salt Marsh	KDATDYSSEAEDWDPDGTTLVECGGAGGTAGTYTEILDNFDTDQYTVDATAVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVTSDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFSTFMNVE
Ga0181606_102283473	3300018048	Salt Marsh	LDQFDTDDYEEGPISVNGGTLSADLIKDSDGLLATASQTADRLFGVQTFTSPVVVTSNSSIFTVSFGVNQASSMWFFEDIGRGNPDQYQVYAIGSGPFSTFMTVE
Ga0181559_103055732	3300018415	Salt Marsh	GTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVTSDSSLFTVSFGVNQASSVWMTSTGVPENEYQVYAIGSGPFSTFMNVE
Ga0181559_107772792	3300018415	Salt Marsh	ATPVTGGTLSADLITNASGMVVGAVDTADRLFGVQTFTTPVVVTSGSTVFTVSFGVNQASSMWYYQDLMIGPNQYQVYAIGSGPFSTFMTVE
Ga0181558_101838111	3300018417	Salt Marsh	DWDPDGTTLVECGGAGGTAGTYTEILDNFDTDQYTVDATAVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVTSDSSLFTVSFGVNQASSVWMTSTGVPENEYQVYAIGSGPFATFMNVE
Ga0181562_101461351	3300019459	Salt Marsh	VDATAVTGGTLSADLITNANGLVVSAVQTADRLFGVQTFTTPVVVTSDSSVFTVSFGVNQASSMWMTSSGVPLNEYQVYAIGSGPFSTFMTVE
Ga0181595_102508932	3300020053	Salt Marsh	SPLAECGTASGTAGTYNETLDQFDVDEYIAGPISVTGGTLSADLITETDGLLVTAPKTADRLFGVQTFTSPVVVTSDSTVFTVSFGVNQASSMWMTSGGVPANQYQVYAIGSGPFSTFMSVE
Ga0206125_100972161	3300020165	Seawater	AGGTAGTYTEILDNFDTDDYSEDAIPVTGGTISADLITNSDGRVVGAVDTADRLFGVQTFTTPVVVTSDSTVFTVSFGVNQASSMWMSEDPGLPDNEYQVYAIGSGPFSTFMSVE
Ga0206125_104002921	3300020165	Seawater	NDYQEDGIAVTGGTISADLITNANGLVATAAKTADRLFGLQTFSSPVVVTTGSSLFTVSFGVNQASSMWMTSGGVPANEYQVYAIGSGPFSTFMSVE
Ga0181602_102298311	3300020173	Salt Marsh	FDTDDYEEGPISVNGGTLSADLIKDSDGLLATASQTADRLFGVQTFTSPVVVTSNSSIFTVSFGVNQASSMWFFEDIGRGNPDQYQVYAIGSGPFSTFMTVE
Ga0206124_100563743	3300020175	Seawater	VPVTGGTLSADLITDANGLVVTTTETADRLFGVQTFTTPVVIAPSSTVFTVSFGVNQASSLWYYEDLSLGANQYQVYAIGSGPFSTSMTAN
Ga0181599_11859951	3300020178	Salt Marsh	DQFDVDDFEESAIPVTGGTLSADLITAGNGLRVTTSNLADRLFGVQSFSTPVVVTPSSRVFTVSFGVNRASSLWFYQDLTKGPDQYQVYAIGSGPFSTFMSVE
Ga0181599_12307191	3300020178	Salt Marsh	TAVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVQVTSDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFSTFMNVE
Ga0206131_102713281	3300020185	Seawater	IAGWTNPSPLVECGGASGTAATYTEILDQFDVNDFEEGPIAVTDGTLSADLITAAAGTVVTASNTADRLFGVQTFTTPVEVTPSSSVFTVSFGVNQASSMWFFEDLTKGANQYQVYSIGSGPFSTSMAVE
Ga0181597_100448664	3300020194	Salt Marsh	TYTEILDNFDIGEYTVDATAVTGGTLSADLITNANGLVVSAVQTADRLFGVQTFTTPVVVTSDSSVFTVSFGVNQASSMWMTSSGVPLNEYQVYAIGSGPFSTFMTVE
Ga0181597_103130272	3300020194	Salt Marsh	YEEGPISVNGGTLSADLIKDSDGLLATASQTADRLFGVQTFTSPVVVTSSSSIFTVSFGVNQASSMWFFEDIGRGNPDQYQVYAIGSGPFSTFMTVE
Ga0211548_106384892	3300020454	Marine	SEAENWDESGTTLAECGGAGGTAGTYTEILDHFQPNEYTVDATPVTGGTLSADLITNSNGLVVDAVKTADRLFGVQTFTTAVEVTADSSLFTVSFGVNQASSLWMSSGGVPSNEYQVYAIGSGPFSTFMNVE
Ga0213862_101514961	3300021347	Seawater	SGWEDPSPLVECGGASGTAGTYVETLDQFDSDVYIAGPISVTGGTLSADLITNASGLLVTAPTTADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE
Ga0206123_102421341	3300021365	Seawater	VGTAGTYTETLDNFDTNDYQEDGIPVTGGTISADLITNSNGLVVTAPLIADRLFGLQTFTTPVVVTTGSSLFTVSFGVNQASSMWMTSDGVPTNEYQVYAIGSGPFSTFMSVE
Ga0213869_100330611	3300021375	Seawater	IKAKKQFTNTMHTYKDGVSGNYCWTKDAMDYSSQAEDWDENGTTLVECGGAGGTAGTYIEILDNFDTDQYTVDATPVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVVVTSDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFSTFMNVE
Ga0213868_106440241	3300021389	Seawater	TNTMHTYKDGVSGNYCWTKDAMDYSSQAEDWDENGTTLVECGGAGGTAGTYIEILDNFDTDQYTVDATPVTGGTLSADLITNANGQVVGDVQTADRLFGVQTFTTPVVVTSDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFSTFMNVE
Ga0213866_102000032	3300021425	Seawater	TEILDQFDTDDYEEGPISVNGGTLSADLIKDSDGLLATASQTADRLFGVQTFTSPVVVTSSSSIFTVSFGVNQASSMWFFEDIGRGNPDQYQVYAIGSGPFSTFMTVE
Ga0222719_107632171	3300021964	Estuarine Water	TKDATDYSSEAEDWDPAGTTLVECGGAGGMAGTYTEILDNFAEDVYTVDATPVTGGTLSADLIANSDGRVVGAVETADRLFGIQTFTTPVVVTSDSSVFTVSFGVNQASSLWMTDQGRIDEYEVYAIGSGPFSTFMTVD
Ga0255771_12736531	3300022900	Salt Marsh	VNGGTLSADLIKDSDGLLATASQTADRLFGVQTFTSPVVVTSSSSIFTVSFGVNQASSMWFFEDIGRGNPDQYQVYAIGSGPFSTFMTVE
(restricted) Ga0233426_103608791	3300022920	Seawater	DQFGPSEYTVEATPVTGGTLSADLITNASGLLVTAPQTADRLFGVQTFTTPVVVASDSTVFTVSFGVNQASSMWYYEDLNEGANQYQVYAIGSGPFSTFMTVE
Ga0255765_10852053	3300022921	Salt Marsh	LGWDDPSPLVECGDSSGTAGTYTEILDQFDVDDFEESAIPVTGGTLSADLITAGNGLRVTTSNLADRLFGVQSFSTPVVVTPSSRVFTVSFGVNRASSLWFYQDLTKGPDQYQVYAIGSGPFSTFMSVE
Ga0255779_11849251	3300022922	Salt Marsh	GTAGTYTEILDQFDVDDFEESAIPVTGGTLSADLITAGNGLRVTTSNLADRLFGVQSFSTPVVVTPSSRVFTVSFGVNRASSLWFYQDLTKGPDQYQVYAIGSGPFSTFMSVE
Ga0255758_103160291	3300022928	Salt Marsh	EAEDWDPEGTALVECGGAEGTAGTYTEILDNFDTDQYTVDATPVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVISDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFSTFMNVE
Ga0255752_100749871	3300022929	Salt Marsh	GTAGTYTEILDQFDTDDYEEGPISVNGGTLSADLIKDSDGLLATASQTADRLFGVQTFTSPVVVTSSSSIFTVSFGVNQASSMWFFEDIGRGNPDQYQVYAIGSGPFSTFMTVE
(restricted) Ga0233427_101928771	3300022933	Seawater	TGGTLSADLITDAAGLLVTAPTTADRLFGVQTFTTPVVVTSDSTVFTVSFGVNQASSMWYYEDLNEGANQYQVYAIGSGPFSTFMTVE
Ga0255751_101462712	3300023116	Salt Marsh	WTKDATDYSSEAEDWDPDGTTLVECGGAGGTAGTYTEILDNFDTDQYTVDATPVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVISDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFSTFMNVE
Ga0255757_105384541	3300023117	Salt Marsh	GGVSGNYCWTKDATDYSSEAEDWDPDGTTLVECGGAGGTAGTYTEILDNFDTDQYTVDATPVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVTSDSSLFTVSFGVNQASSLWMTSSGVPENEYQVYAIGSGPFSTFMNVE
Ga0255761_100724326	3300023170	Salt Marsh	SADLITNANGQVVGAVQTADRLFGVQTFTTPVEVTSDSSLFTVSFGVNQASSVWMTSTGVPENEYQVYAIGSGPFATFMNVE
Ga0228666_10612202	3300024221	Seawater	FDTDEYTVDATPVTGGTLSADLITNANGQVVGAVETADRLFGIQTFTTPVVVTSDSSVFTVSFGVNQASSLWMTDQGRIDEYEVYAIGSGPFSTFMTVD
Ga0233399_11482511	3300024231	Seawater	ECGGSGGTAGTYGEVLDQFSPDEYAVEAVPVTGGTLSADLITDANGLVVTTPVTADRLFGVQTFTTPVVIAPSSTVFTVSFGVNQASSLWYYEDLSLGANQYQVYAIGSGPFSTSMTAN
(restricted) Ga0233438_100741821	3300024255	Seawater	TYTEILDNFDSDEYTVDATPVTGGTLSADLITNANGQVVGAIKTADRLFGIQTFTTPVVVTSDSSVFTVSFGVNQASSLWMTDQGRIDEYEVYAIGSGPFSTFMTVD
(restricted) Ga0233438_102412052	3300024255	Seawater	VTGGTLSADLITDANGLVVTTTETADRLFGVQTFTTPVVIAPSSTVFTVSFGVNQASSLWYYEDLNLGANQYQVYAIGSGPFSTSMTAN
Ga0233451_103476731	3300024301	Salt Marsh	EILDNFDIGEYTVDATAVTGGTLSADLITNANGQVVGAVQTADRLFGVQTFTTPVEVISDSSLFTVSFGVNQASSVWMTSTGVPENEYQVYAIGSGPFATFMNVE
Ga0228618_10667642	3300024315	Seawater	TGGTLSADLITDANGQVVGAVETADRLFGVQTFTTPVVVTSDSSVFTVSFGVNQASSLWMTDQGIVDEYEVYAIGSGPFSTFITVY
Ga0209251_11823752	3300025668	Marine	WENPSPLAECGGAGGTAGIYNATLDQFDIGEYTAGPISVTGGTLSADLITDANGLVVTAVRTADRLFGVQTFTTPVIVSTDSSLFTVSFGVNQASSMWMTDEGAANQYDVYAIGSGPFSTFMTVE
Ga0209306_12202071	3300025680	Pelagic Marine	YSEDAIPVTGGTISADLITNSDGRVVGAVETADRLFGVQTFTTPVVVTSSSSVFTISFGVNQASSMWMSEDGGLPANEYQVYAIGSGPFSTFMTVE
Ga0209505_11432301	3300025690	Pelagic Marine	VTYVETLDQFDSDVYIAGPISVTGGTLSADLITNASGLLVTASKTADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE
Ga0209406_11189462	3300025694	Pelagic Marine	YCWTKDTTAYSSQSDSEGWTSPATLVECGGAGGTAGTYTEILDNFDTDDYSEDAIPVTGGTISADLIANSDGRVVGAVETADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVFAIGSGPFSTFMTVE
Ga0209374_10120391	3300025705	Marine	TKEVTSYSSEAEDWEENTSLVECGDAGGTAGTYTEILDNFDREVYTIDATPVTGGTLSADLITNANGQVVGAIEIADRLFGVQTFTTPVVVTSDSTVFTVSFGVNQASSMWYYEDLGLGANQYQVYAIGSGPFSTFMTVE
Ga0209305_11158891	3300025712	Pelagic Marine	TAGTYVETLDQFDSDVYIAGPISVTGGTLSADLITNASGLLVTASKTADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE
Ga0208545_10482603	3300025806	Aqueous	SDPSPLAECGGASGTAGTYVETLDQFDVGEYTAGPISVTNGTLSADLITDANGLLVTAITTADRLFGVQTFTTPIIVTTDSSLFTVSFGVNQASGIWMTDEGADNEYDVYAIGSGPFSTFMTVE
Ga0209603_12601811	3300025849	Pelagic Marine	KDAAANTSDGDNSGWGLSTTLVECGGAGGTAGTYVETLDQFDVGEFTAGPISVTGGTLSADLITDADGLLVIGPDSADRLFGVQTFTSPVVVTSDSSVFTVSFGVNQASSMWMQDEGAIDEYDVYAIGSGPFSTFMTVE
Ga0209603_13082031	3300025849	Pelagic Marine	QDGPSGNYCWTKDGTEHSSSSETWDDPTVYVECGGAGGTAGTYTEILDNFDTDDYSEDAIPVTGGTISADLIANSDGRVVGAVETADRLFGVQTFTTPVVVTSSSSVFTISFGVNQASSMWMSEDGGLPANEYQVYAIGSGPFSTFMTVE
Ga0209308_103457821	3300025869	Pelagic Marine	AVTGGTISADLIVNSTGMVAGAIETADRLFGVQTFTTPVVVTPGSSVFTVSFGVNQASSLWFYEDTTKGANQYQVYAIGSGPFATFMSVE
Ga0209308_104440691	3300025869	Pelagic Marine	WADPSPLVECGGASGTAGTYVETLDQFDSDVYIAGPISVTGGTLSADLITNASGLLVTASKTADRLFGVQTFTTPVEVTSGSTVFTVSFGVNQASSMWMTDEGAANEYDVYAIGSGPFSTFMTVE
Ga0209533_12141701	3300025874	Pelagic Marine	TLSADLITDANGLVVTAPQTADRLFGVQTFTTPVVIAPSSTVFTVSFGVNQASSLWYYEDTNIGANVYQVYAIGSGPFSTSMSAN
Ga0209632_102859822	3300025886	Pelagic Marine	GGASGTAATYTEILDQFDVNDFEEGPIAVTDGTLSADLITAAAGTVVTASNTADRLFGVQTFTTPVEVTPSSSVFTVSFGVNQASSMWFFEDLTKGANQYQVYSIGSGPFSTSMAVE
Ga0209631_101496593	3300025890	Pelagic Marine	GPISVTGGTLSADLITDADGLLVSASDTADRLFGVQTFSSPVVVTSDSSVFTVSFGVNQASSLWMTDQGEIDEYEVYAIGSGPFSTFMTVD
Ga0209631_104468112	3300025890	Pelagic Marine	WTKDGTEYSSNSETWDDPTVYVECGGAGGTAGTYTEILDNFDTDDYSEDAIPVTGGTISADLITNSDGRVVGAVETADRLFGVQTFTTPVVVTSSSSVFTISFGVNQASSMWMSEDAGLPANEYQVYAIGSGPFSTFMSVE
Ga0209630_103522321	3300025892	Pelagic Marine	HTYDSGVSGNYCWTKDSTELSSNSETWDEDGTNLVECGEAGGTAGTYTEILDNFDTDDYSEDAIPVTGGTISADLITNSDGRVVGAVETADRLFGVQTFTTPVVVTSSSSVFTISFGVNQASSMWMSEDGGLPANEYQVYAIGSGPFSTFMTVE
Ga0209335_102005412	3300025894	Pelagic Marine	DIAGWTNPSPLVECGGASGTAATYTEILDQFDVNDFEEGPIAVTDGTLSADLITAAAGTVVTASNTADRLFGVQTFTTPVEVTPSSSVFTVSFGVNQASSMWFFEDLTKGANQYQVYSIGSGPFSTSMAVE
Ga0247592_10888721	3300026500	Seawater	DVDNSGWTNPTSLVECGGSGGTAGTYGEVLDQFDVGEYTVEAVPVTGGTLSADLITDANGLVVTTTETADRLFGVQTFTTPVVIAPSSTVFTVSFGVNQASSLWYYEDLSIGANQYQVYAIGSGPFSTSMTAN
Ga0228674_12279061	3300028008	Seawater	GNYGEVLDQFSPDEYAVEAVPVTGGTLSADLITDANGLVVTTTETADRLFGVQTFTTPVVIAPSSTVFTVSFGVNQASSLWYYEDLSIGANQYQVYAIGSGPFSTSMTAN
Ga0257114_12548361	3300028196	Marine	FNEILDQFGVDEYAVDPFPVNGGTLSADLIKEDGLLATTPQSADTLFGVQTFTTPVVVTPSSSVFTVSFGVNQASSMWFYEDIGRGNPNQYQVFAIGSGPFSTFMTVE
Ga0257114_12915571	3300028196	Marine	DIGEYTAGPISVTGGTLSADLITDANGLVVTAPLIADRLFGVQTFTTPVIVSTDSSLFTVSFGVNQASSMWMTDEGAANQYDVYAIGSGPFSTFMTVE
Ga0315320_107825931	3300031851	Seawater	DPSPLAECGGAGGTAGVFNEILDQFGVDEYAVDPFPVNGGTLSADLIKEDGLLATTTQSADTLFGVQTFTSPVVVTPSSSVFTVSFGVNQASSMWFYEDIGRGNPNQYQVFAIGSGPFSTFMTVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters