Basic Information | |
---|---|
Family ID | F103227 |
Family Type | Metagenome |
Number of Sequences | 101 |
Average Sequence Length | 66 residues |
Representative Sequence | MKDSFAFIYVHRTNGAIRVESLETARKVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Number of Associated Samples | 64 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 85.15 % |
% of genes near scaffold ends (potentially truncated) | 23.76 % |
% of genes from short scaffolds (< 2000 bps) | 87.13 % |
Associated GOLD sequencing projects | 60 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
---|
|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (45.545 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (37.624 % of family members) |
Environment Ontology (ENVO) | Unclassified (37.624 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (42.574 % of family members) |
⦗Top⦘ |
Full Alignment |
---|
Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. |
Powered by MSAViewer |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 34.85% β-sheet: 36.36% Coil/Unstructured: 28.79% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
|||||
Powered by Feature Viewer |
⦗Top⦘ |
⦗Top⦘ |
Visualization |
---|
All Organisms Unclassified |
Powered by ApexCharts |
⦗Top⦘ |
Visualization |
---|
Freshwater Freshwater Lake Freshwater Lentic Freshwater Anoxic Zone Freshwater Freshwater Lake Freshwater Sediment Surface Ice Estuary Water Estuarine Estuarine Estuarine Water Estuary |
Powered by ApexCharts |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J40625_1009664152 | 3300002835 | Freshwater | MKDSFAFIYVHKTNGAIRVESLETARRINNRPEWKHVSTINAHVCLENILTASTRQRTQYIKDLLK* |
JGI25908J49247_101531252 | 3300003277 | Freshwater Lake | MKDSFAFIYVHKTNGSIRVESQETARKVDGRPEWKHVATVNAHVCLENILTASTRQRTQYIRDLLK* |
JGI25920J50251_100285543 | 3300003404 | Freshwater Lake | MKDSFAFIYVHKTNGAIRVESQETARKVDGRPEWKHVATVNPHVCLENILTASTRQRTQYIRDLLK* |
JGI25919J51413_10189063 | 3300003488 | Freshwater Lake | MKDSFAFIYVHKTNGAIRVESQETARKVDGRPEWKHVATVNPHVCLENILTASTRQRTQYIRDLLK |
Ga0049083_103167802 | 3300005580 | Freshwater Lentic | MKDSFAFIYVHRSNGAIRVESLETARRVDNRPEWKHVSTVNAYVCLENILTASTRQRTQYIRDLLK* |
Ga0049085_101776192 | 3300005583 | Freshwater Lentic | MKDSFAFIYLHRTNGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIRDLLK* |
Ga0070744_101961883 | 3300006484 | Estuarine | MKDSFAFIYVHRTNGAIRVESLDTARKVDGRPEWKHVSTVNAHICLENILTASTRQRAQYIKDLLK* |
Ga0102861_10076883 | 3300007544 | Estuarine | MKDSPAFIYVHKTNGAIRVESLETARRVDNRPEWKHVSTVNPHVCLENILTASTRQRTQYIKDLLK* |
Ga0102877_10863782 | 3300007548 | Estuarine | MKDSFAFIYVHKQSGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTESIRQRALYIKDLLK* |
Ga0102828_10782013 | 3300007559 | Estuarine | MSDNSFAFIYIHRTNGAIRVESLETARRVDNRPEWKHVATVNAHVCLENILTASTRQRTQYIKDLLK* |
Ga0102828_10794872 | 3300007559 | Estuarine | MKDSFAFIYIHRTNGAIRVESLDTARKVDGRPEWKHVSTVNAHICLENILTASTRQRAQYIKDLLK* |
Ga0102828_11330741 | 3300007559 | Estuarine | MKDSFAFIYLHRTNGAIRVESLETARNVDGRPEWKHVSTVNAHIALENILTASTRQRTQYIKDLLK* |
Ga0102919_11298454 | 3300007597 | Estuarine | MKDSFAFIYVHKQSGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRALYIKDLLK* |
Ga0102859_11011392 | 3300007708 | Estuarine | MSDNSFAFIYIHRTNGAIRVESLDTARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK* |
Ga0105748_100081304 | 3300007992 | Estuary Water | MKESPAFIYVHKTNGAIRVESLETARRVDNRPEWKHVSTVNPHVCLENILTASTRQRTQYIKDLLK* |
Ga0108970_102646134 | 3300008055 | Estuary | MKDSFAFIYIHRTNGAIRVESLDTARKVDGRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK* |
Ga0102831_10606555 | 3300008996 | Estuarine | MSDNSFAFIYIHRTNGAIRVESLETARNVDGRPEWRHVSTVNAHICLENILTASTRQRTQYIKDLLK* |
Ga0102816_12289433 | 3300008999 | Estuarine | MKDSFAFIYVHKTNGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQY |
Ga0102829_11608602 | 3300009026 | Estuarine | MKDSFAFIYIHRTNGAIRVESLETARKVDGRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK* |
Ga0102829_11829632 | 3300009026 | Estuarine | MSDNSFAFIYIHRTNGAIRVESLETARNVDGRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK* |
Ga0102860_11664782 | 3300009056 | Estuarine | MKDSFAFIYIHRTNGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK* |
Ga0102814_107660833 | 3300009079 | Estuarine | MKDSFAFIYIHRTNGAIRVESLDTARNVDGRPEWKHVSTVNAHVCLENILTASTRQRALYIKDLLK* |
Ga0114977_100487333 | 3300009158 | Freshwater Lake | MKDSFAFIYVHKTNGSIRVESLETARKVDGRPEWKHVATVNAHVCLENILTASTRQRTQYIKDLLK* |
Ga0114977_100584405 | 3300009158 | Freshwater Lake | MKDSFAFIYVHKQSGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK* |
Ga0153805_10651182 | 3300012013 | Surface Ice | MKDSFAFIYVHKQSGAIRVESLETARRVNNRPEWKHVSTVNAHVCLENILTASTRQRTQYIRDLLK* |
Ga0181364_10658783 | 3300017701 | Freshwater Lake | VVEREGGQMKDSFAFIYLHKTNGAIRVESLETARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0181350_11535341 | 3300017716 | Freshwater Lake | MKDSFAFIYVHRSNGAIRVESLETARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0181365_10259381 | 3300017736 | Freshwater Lake | MKDSFAFIYLHKTNGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIRDLLK |
Ga0181365_11448812 | 3300017736 | Freshwater Lake | MKDSFAFIYVHRSNGSIRVESLETARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIRDLLK |
Ga0181365_11702362 | 3300017736 | Freshwater Lake | MKDSFAFIYVHRSNGAIRVESLDTARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0181358_11155142 | 3300017774 | Freshwater Lake | MKDSFAFIYVHKTNGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIRDLLK |
Ga0181357_11165403 | 3300017777 | Freshwater Lake | MKDSFAFIYVHKTNGAIRVESQETARKVDGRLEWKHVATVNPHVCLENILTASTRQRTQYIRDLLK |
Ga0181357_11278922 | 3300017777 | Freshwater Lake | MKDSFAFIYVHKTNGSIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIRDLLK |
Ga0181357_11885353 | 3300017777 | Freshwater Lake | MKDSFAFIYVHKTNGAIRVESLDTARRVNNRPEWKHVSTINAHVCLENILTASTRQRTQYIKDLLK |
Ga0181357_12590853 | 3300017777 | Freshwater Lake | MSNTLKIKTLPNNDFAFVYVHRKNGAIRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRTQYIKDLLK |
Ga0181357_13162203 | 3300017777 | Freshwater Lake | KIKTLPNNDFAFVYVHRKNGAIRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRTQYIRDLLK |
Ga0181346_12679012 | 3300017780 | Freshwater Lake | MKDSFAFIYVHKTNGAIRVESQETARKVDGRPEWKHVATVNPHVCLENILTASTRQRTQYIKDLLK |
Ga0181348_12801702 | 3300017784 | Freshwater Lake | MKDSFAFIYVHKTNGAIRVESLDTARRVNNRPEWKHVSTINAHVCLENILKASTRQRTQYIKDLLK |
Ga0181361_1045144 | 3300019783 | Freshwater Lake | MKDSFAFIYVHKTNGSIRVESQETARKVDGRPEWKHVATVNAHVCLENILTASTRQRTQYIRDLLK |
Ga0181359_11158663 | 3300019784 | Freshwater Lake | MKDSFAFIYVHRSNGAIRVESLDTARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0211731_101294602 | 3300020205 | Freshwater | MKDNFAFVYVHKTNGAIRVESLETARRVDGRPEWKHVSTVNAHVCLENILTASTRQR |
Ga0194045_10000908 | 3300021516 | Anoxic Zone Freshwater | MKDSFAFIYVHKTNGAIRVESLDTARKVDGRPEWKHVATVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0222714_102108363 | 3300021961 | Estuarine Water | MSDNSFAFIYIHRTNGAIRVESLDTARNVDGRPEWKHVSTVNAHIALENILTASTRQRTQYIKDLLK |
Ga0222713_102752941 | 3300021962 | Estuarine Water | VSFMGPDTVAFIYVHAWNGLVRVESLDTARNIDGNPEWKHVATVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0222712_102015323 | 3300021963 | Estuarine Water | MKDSFAFIYVHKGNGTIRVESLDTARNVDGRPEWKHVSTVNAHIALENILTASTRQRTQYIKDLLK |
Ga0222712_102498202 | 3300021963 | Estuarine Water | VKDSFAFIYIHRTNGAIRVESLETARNVDGRPEWRHVSTVNAHIALENILTASTRQRTQYIKDLLK |
Ga0244775_100824657 | 3300024346 | Estuarine | MKDSFAFIYVHRTNGAIRVESLDTARKVDGRPEWKHVSTVNAHICLENILTASTRQRAQYIKDLLK |
Ga0244775_101609036 | 3300024346 | Estuarine | MSDNSFAFIYIHRTNGAIRVESLETARRVDNRPEWKHVATVNAHVCLENILTASTRQRAQ |
Ga0244775_102973182 | 3300024346 | Estuarine | MKDSFAFIYVHKGNGTIRVESLETARKVDGRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0208926_10001839 | 3300027205 | Estuarine | MKDSPAFIYVHKTNGAIRVESLETARRVDNRPEWKHVSTVNPHVCLENILTASTRQRTQYIKDLLK |
Ga0208942_10885744 | 3300027627 | Freshwater Lentic | MKDSFAFIYVHKTNGAIRVESLETARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0209297_100435610 | 3300027733 | Freshwater Lake | MKDSFAFIYVHKTNGSIRVESLETARKVDGRPEWKHVATVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0209297_10625934 | 3300027733 | Freshwater Lake | MKDSFAFIYVHKQSGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0209246_100472151 | 3300027785 | Freshwater Lake | IYVHKTNGAIRVESLDTARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0209353_101175404 | 3300027798 | Freshwater Lake | MKDSFAFIYVHKQSGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRTQYIRDLLK |
Ga0209353_101979901 | 3300027798 | Freshwater Lake | MKDSFAFIYVHRSNGAIRVESLETARRVDNRPEWKHVSTVNAYVCLENILTASTRQRTQYIRDLLK |
Ga0209353_102819942 | 3300027798 | Freshwater Lake | MKDSFAFIYVHKTNGSIRVESLETARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0209354_100316585 | 3300027808 | Freshwater Lake | MKDSFAFIYVHKQSGAIRVESLETARRVNNRPEWKHVSTINAHVCLENILTASTRQRTQYIRDLLK |
Ga0209354_101342424 | 3300027808 | Freshwater Lake | MKDSFAFIYLHKTNGAIRVESLETARRVDNRPEWKHVSTVNAHVCLENILTASTRQRT |
Ga0315291_110178241 | 3300031707 | Sediment | MKDSFAFIYVHRSNGSIRVESLDTARRVDNRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0315291_110245292 | 3300031707 | Sediment | MKDSFAFIYIHRTNGAIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0315291_111079501 | 3300031707 | Sediment | SDTLRIKTLPNNDFAFVYVHRKNGTVRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRAQYIKDLLK |
Ga0315291_111686143 | 3300031707 | Sediment | MKDSFAFIYVHKQSGAIRVESLETARRVDNRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0315291_111876172 | 3300031707 | Sediment | MSNTLKIKTLPSNDFAFVYVHRKNGAIRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRAQYIKDLLK |
Ga0315293_101669386 | 3300031746 | Sediment | MKDSFAFIYVHKGNGTIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0315293_104815014 | 3300031746 | Sediment | MSDNSFAFIYVHKTNGAIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0315293_108949951 | 3300031746 | Sediment | MSDTLRIKTLPNNDFAFVYVHRKNGTVRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRTQY |
Ga0315293_110726591 | 3300031746 | Sediment | MKDSFAFIYVHRSNGSIRVESLDTARRVDNRPEWKHVSTVNAHICLENILTASTRQRTQY |
Ga0315293_110739841 | 3300031746 | Sediment | KTLPSNDFAFVYVHRKNGAIRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRALYIKDLLK |
Ga0315288_111645943 | 3300031772 | Sediment | MKDSFAFIYVHKQSGAIRVESLETARRVDSRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315288_112497822 | 3300031772 | Sediment | MSDTLRIKTLPNNDFAFVYVHRKNGTVRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASIRQRTQYIKDLLK |
Ga0315290_102109695 | 3300031834 | Sediment | MKDSFAFIYVHKGNGTIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315290_103674603 | 3300031834 | Sediment | MSDTLRIKTLPNNDFAFVYVHRKNGTVRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRAQYIKDLLK |
Ga0315297_109541442 | 3300031873 | Sediment | MKDSFAFIYVHRSNGSIRVESLDTARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0315294_104146264 | 3300031952 | Sediment | MKDSFAFIYIHRTNGAIRVESLDTARKVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0315294_105745083 | 3300031952 | Sediment | MSDTLRIKTLPNNDFAFVYVHRKNGTVRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRTQYIKDLLK |
Ga0315294_112657012 | 3300031952 | Sediment | MKDSFAFIYVHRTNGAIRVESLETARKVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0315294_112680052 | 3300031952 | Sediment | MSDNSFAFIYVHKGNGTIRVESLETARNVDGRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0315274_112369744 | 3300031999 | Sediment | MKDSFAFIYVHKGNGTIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRT |
Ga0315274_113521523 | 3300031999 | Sediment | MKDSFAFIYVHKGNGAIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315274_114277912 | 3300031999 | Sediment | MKDSFAFIYIHRTNGAIRVESLDTARKVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315289_110915032 | 3300032046 | Sediment | MKDSFAFIYVHKTNGAIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315284_118016353 | 3300032053 | Sediment | SFAFIYVHKGNGTIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315277_112586003 | 3300032118 | Sediment | VHRFNGSIRVESLETARRVDNRPEWKHVSTVNAHICLENILTASTRQRAQYIKDLLK |
Ga0315295_122587492 | 3300032156 | Sediment | MKDSFAFIYVHKQSGAIRVESLETARRVDNRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0315283_114184971 | 3300032164 | Sediment | GNGTIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315268_102288432 | 3300032173 | Sediment | MSDTLRIKTLPSNDFAFVYVHRKNGAIRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRAQYIKDLLK |
Ga0315268_124479331 | 3300032173 | Sediment | GGQAMSDNSFAFIYVHKGNGTIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRAQYIKDLLK |
Ga0315276_115357812 | 3300032177 | Sediment | MSDNSFAFIYVHKTNGAIRVESLETARNVDGRPEWKHVSTVNAHVALENILTASTRQRTQYIKDLLK |
Ga0315271_106001404 | 3300032256 | Sediment | MKDSFAFIYVHKGNGTIRVESLETARNVDGRPEWKHVSTVNAHICLENILTSSTRQRTQYIKDLLK |
Ga0315286_115178721 | 3300032342 | Sediment | MKDSFAFIYVHRTNGAIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315286_121681251 | 3300032342 | Sediment | IYVHKGNGTIRVESLETARNVDSRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315286_122356443 | 3300032342 | Sediment | MSDNSFAFIYLHRTNGAIRVESLETARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIQDLLK |
Ga0315287_104390281 | 3300032397 | Sediment | QAMSDNSFAFIYLHRTNGAIRVESLETARNVDGRPEWKHVSTVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0315287_125877641 | 3300032397 | Sediment | RTASGLAVVAGGQAMSDNSFAFIYVHKTNGAIRVESLDTARNVDGRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0315275_122447861 | 3300032401 | Sediment | GGQMSNTLKIKTLPSNDFAFVYVHRKNGAIRVESLDTAKHVGGSPEWKHVSTLNPYVCLENILTASTRQRAQYIKDLLK |
Ga0334722_100618204 | 3300033233 | Sediment | MSDNSFAFIYVHKGNGTIRVESLETARNVDSRPEWKHVSTVNAHICLENILTASTRQRTQYIKDLLK |
Ga0334992_0003469_10734_10964 | 3300033992 | Freshwater | MSNTLKIKTLPNNDFAFVYVHRKNGAIRVESLDTAKHVDGSPEWKHVSTLNPYVCLENILTASTRQRTQYIRDLLK |
Ga0334992_0267715_303_503 | 3300033992 | Freshwater | MKDSFAFIYVHKTNGAIRVESQETARKVDGRPEWKHVATVNAHVCLENILTASTRQRTQYIKDLLK |
Ga0334994_0134360_729_929 | 3300033993 | Freshwater | MKDSFAFIYVHKTNGAIRVESLETARRINNRPEWKHVSTINAHVCLENILTASTRQRTQYIKDLLK |
Ga0335029_0003593_11139_11339 | 3300034102 | Freshwater | MKDSFAFIYVHKTNGAIRVESLDTARRVDNRPEWKHVSTVNPHVCLENILTASTRQRTQYIKDLLK |
⦗Top⦘ |