Metagenome / Metatranscriptome Family F103160

Basic Information
Family ID	F103160
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	85 residues
Representative Sequence	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL
Number of Associated Samples	78
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (47.525 % of family members)
Environment Ontology (ENVO)	Unclassified (75.248 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (76.238 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.05% β-sheet: 0.00% Coil/Unstructured: 57.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF11171	DUF2958	67.33
PF13538	UvrD_C_2	0.99

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300007229\|Ga0075468_10014314	Not Available	3030	Open in IMG/M
3300009433\|Ga0115545_1010669	Not Available	4023	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.05%
Terrestrial	Environmental → Terrestrial	4.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	88.12%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.95%
Soil	Environmental → Terrestrial → Soil	4.95%
Freshwater	Environmental → Aquatic → Freshwater	1.98%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	63.37%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.93%
Oceanic	Environmental → Aquatic → Marine → Oceanic	5.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.95%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.95%
Clay	Environmental → Terrestrial → Soil → Clay	4.95%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.98%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.98%
Strait	Environmental → Aquatic → Marine → Strait	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	63.37%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.98%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.98%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.98%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.99%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.99%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.99%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.99%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	47.52%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	8.91%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	5.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.95%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	4.95%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.96%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.96%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.97%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.98%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.98%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.98%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.98%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	1.98%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.98%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.99%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.99%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.99%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.99%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005346	Saline sediment microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007231	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018775	Metatranscriptome of marine microbial communities from Baltic Sea - GS679_0p8	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022053	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025881	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20158J14315_102344602	3300001355	Pelagic Marine	MDIHCRHCGEPWDLDTLHEFGDYNRRAKLFAKFGCNALMNDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLFMMEELRE*
Ga0066222_10175601	3300004460	Marine	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEGD*
Ga0066223_10272453	3300004461	Marine	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEL*
Ga0074242_111657503	3300005346	Saline Water And Sediment	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEAL*
Ga0074648_10747462	3300005512	Saline Water And Sediment	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCAAPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEVMA*
Ga0075474_100821173	3300006025	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEELA*
Ga0075474_101651042	3300006025	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0075461_101790562	3300006637	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0098048_10283533	3300006752	Marine	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCSEPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEVMG*
Ga0098055_11944791	3300006793	Marine	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPEEW
Ga0070749_105121452	3300006802	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEAI*
Ga0070754_103121531	3300006810	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWC
Ga0070754_104353553	3300006810	Aqueous	YCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEELA*
Ga0075476_103000511	3300006867	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSSPCIDERVAEASAFLQDDS
Ga0075477_102320963	3300006869	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEE
Ga0075477_103412241	3300006869	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA*
Ga0070750_100965113	3300006916	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA*
Ga0070750_103330271	3300006916	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYD
Ga0070750_104536552	3300006916	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYD
Ga0070746_104126821	3300006919	Aqueous	EPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEELA*
Ga0070746_105490343	3300006919	Aqueous	DTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0070748_11091202	3300006920	Aqueous	MDIHCRHCGEPWDLDTLHEFGDYNRRAKLFAKLGCNALMDDGDRAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLFMMEDLRE*
Ga0098046_11272731	3300006990	Marine	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPEEWC
Ga0075468_100143147	3300007229	Aqueous	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDRAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEF*
Ga0075469_101484022	3300007231	Aqueous	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEF*
Ga0070745_11573653	3300007344	Aqueous	DIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEL*
Ga0070745_11613951	3300007344	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWC
Ga0099851_10821272	3300007538	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA*
Ga0099851_11997671	3300007538	Aqueous	MDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEELA*
Ga0099851_12751141	3300007538	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDI
Ga0099849_12275942	3300007539	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNAPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA*
Ga0099847_12513082	3300007540	Aqueous	CSMMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEELA*
Ga0099850_10931702	3300007960	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMDEL*
Ga0099850_13731362	3300007960	Aqueous	AEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCSSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0075480_103770941	3300008012	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0102963_10394454	3300009001	Pond Water	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPYPDEWCGVYDILEMMEELA*
Ga0102957_13197971	3300009027	Pond Water	MDIHCRHCGEPWELGTLHEFGDYNRRAKLFAKLGCNALMDGGDRAEPCGMPVVDSEIAQASAVLQDDSPHPDDWLGAHDLVAMLDYLGED*
Ga0115566_102637552	3300009071	Pelagic Marine	MTAQSIKTGVNKMDIHCRHCGEPWDLDTLHEFGDYNRRAKLFAKFGCNALMNDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLFMMEELRE*
Ga0114918_101431182	3300009149	Deep Subsurface	MDIHCRHCGEPWELDTLHEFGDYTRRAKLFAKFGCNALMDDGDLAEPCSMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEDL*
Ga0114918_102952062	3300009149	Deep Subsurface	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFALYGCNALMGDGESREPCATPCIDERVAEASAFLQDDSPHPDEWCGVYDLLEMMEELA*
Ga0115545_101066910	3300009433	Pelagic Marine	MDIHCRHCGEPWDLDTLHEFGDYNRRAKLFAKFGCNALMNEGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLFMMEELRE*
Ga0115567_101263595	3300009508	Pelagic Marine	MTAQSIKTGVNKMDIHCRHCGEPWDLDTLHEFGDYNRRAKLFAKFGCNALMNEGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLFMMEELRE*
Ga0098049_10544794	3300010149	Marine	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEVMG*
Ga0129345_13095952	3300010297	Freshwater To Marine Saline Gradient	MMDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0129351_11325623	3300010300	Freshwater To Marine Saline Gradient	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCSSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0136655_10503852	3300010316	Freshwater To Marine Saline Gradient	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0136656_11245352	3300010318	Freshwater To Marine Saline Gradient	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDIL
Ga0129333_116294622	3300010354	Freshwater To Marine Saline Gradient	REGCSMMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCSSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL*
Ga0129324_103668112	3300010368	Freshwater To Marine Saline Gradient	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDIL
Ga0180120_100693323	3300017697	Freshwater To Marine Saline Gradient	MSDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCSSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL
Ga0180120_100712341	3300017697	Freshwater To Marine Saline Gradient	MDIHCRHCGEPWDLDTLHEFGDYNRRAKLFAKLGCNALMDDGDRAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLFMMEDLRE
Ga0180120_103927542	3300017697	Freshwater To Marine Saline Gradient	WEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA
Ga0181390_10654753	3300017719	Seawater	MDIHCRHCGEPWDLYTLHEFGDYNRRAKLFAKFGCNALMDNGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEDL
Ga0181577_102090224	3300017951	Salt Marsh	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCTAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEELA
Ga0188848_10013491	3300018775	Freshwater Lake	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDRAEPCSMPCVDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEDL
Ga0188848_10169362	3300018775	Freshwater Lake	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEL
Ga0206677_1000748911	3300021085	Seawater	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMNDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEDI
Ga0206683_100180399	3300021087	Seawater	MDIHCRHCGEPWDLYTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEDI
Ga0213862_102955602	3300021347	Seawater	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEELA
Ga0222716_102165381	3300021959	Estuarine Water	MDIFCRHCGEPWELGTLHEFGDYNRRAKLFAKLGCNALMDAGETTTPCGMPVVDSEIAQASAVLQDDSPHPDDWLGAHDLVAMLDYLGED
Ga0222715_102050583	3300021960	Estuarine Water	MDIHCRHCGEPWDLGTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEF
Ga0222714_101281314	3300021961	Estuarine Water	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL
Ga0222714_102505972	3300021961	Estuarine Water	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFALYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEEL
Ga0222719_104691941	3300021964	Estuarine Water	WELGTLHEFGDYNRRAKLFAKLGCNALMDDGDLAEPCGMPVVDSEIAQASAVLQDDSPHPDDWLGAHDLVAMLDYLGED
Ga0212030_10172792	3300022053	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCSSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL
Ga0212025_10008267	3300022057	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL
Ga0212025_10954952	3300022057	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMME
Ga0196887_10526412	3300022178	Aqueous	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEF
Ga0196901_11186252	3300022200	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA
Ga0208303_100503914	3300025543	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQD
Ga0208161_11312022	3300025646	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMDEL
Ga0208160_10172151	3300025647	Aqueous	EGCSMSDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDEGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA
Ga0208162_11298041	3300025674	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA
Ga0208899_10784573	3300025759	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEELA
Ga0208899_11592383	3300025759	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCG
Ga0208545_10454691	3300025806	Aqueous	MDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDRAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEF
Ga0208543_10925561	3300025810	Aqueous	LHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL
Ga0208785_11000623	3300025815	Aqueous	EHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEAI
Ga0208917_12157842	3300025840	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL
Ga0208645_11435032	3300025853	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEEWCG
Ga0209309_105065651	3300025881	Pelagic Marine	KMDIHCRHCGEPWDLDTLHEFGDYNRRAKLFAKFGCNALMNEGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLFMMEELRE
Ga0208644_12909902	3300025889	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEAI
Ga0209631_1000348923	3300025890	Pelagic Marine	MDIHCRHCGEPWDLDTLHEFGDYNRRAKLFAKFGCNALMNDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLFMMEELRE
Ga0209929_11145761	3300026187	Pond Water	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSAPCIDERVAEASAFLQDDSPHPDEWCGVYDILEMMEEL
Ga0256368_10890482	3300028125	Sea-Ice Brine	TLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEL
Ga0307488_102753581	3300031519	Sackhole Brine	MDIHCRHCGEPWDLGTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEL
Ga0307488_103308113	3300031519	Sackhole Brine	VNKMDIHCRHCGEPWELDTLHEFGDYNRRAKLFAKFGCNALMNDGDLAEPCTMPCIDESIAEASGVLQDDSPHPDDWLGASDLLMMLEDL
Ga0307380_103328823	3300031539	Soil	MDIHCRHCGEPWELDTLHEFGDYTRRAKLFAKFGCNALMDNGDLAEPCSMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEDL
Ga0307380_111942651	3300031539	Soil	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCATPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEAL
Ga0307378_102535964	3300031566	Soil	MDIHCRYCGEPWELYTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCSMSCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEDL
Ga0307378_106241172	3300031566	Soil	MSDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCATPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEAL
Ga0307377_104220233	3300031673	Soil	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCATPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMVEEL
Ga0315322_103564491	3300031766	Seawater	HCGEPWEIYTLHEFNDYNRRAKLFAKLGCNALMDDGENTTPCNMPVVDLGIAQASAVLQDDSPHPDDWLGASDLLMMLEGG
Ga0315320_102021572	3300031851	Seawater	MDIHCRHCGEPWEIYTLHEFNDYNRRAKLFAKLGCNALMDDGENTTPCNMPVVDLGIAQASAVLQDDSPHPDDWLGASDLLMMLEGG
Ga0315320_109947351	3300031851	Seawater	MDIHCRHCGEPWDLYTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEEL
Ga0315321_101425903	3300032088	Seawater	MDIHCRHCGEPWEIYTLHEFNDYNRRAKLFAKLGCNALMDDGESTTPCNMPVVDLEISQASAVLQDDSPHPDDWLGASDLLMMLEGG
Ga0314858_173653_317_553	3300033742	Sea-Ice Brine	EPWELDTLHEFGDYNRRAKLFAKFGCNALMDDGDLAEPCTMPCIDEGIAEASGVLQDDSPHPDDWLGASDLLMMLEGG
Ga0348335_025684_2485_2706	3300034374	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHPEE
Ga0348335_173574_48_314	3300034374	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSSPCIDERVAEASAFLQDDSPHPEEWCGVYDILEMMEEL
Ga0348336_141668_515_730	3300034375	Aqueous	MSDIYCRFCAEPWEHDTLHEFNDYQQRGKLFAQYGCNALMDDGERREPCNSPCIDERVAEASAFLQDDSPHP
Ga0348336_164953_411_638	3300034375	Aqueous	MMDIYCRFCAEPWEHDTLHEFNDYPRRAKLFAQYGCNALMDDGERREPCSSPCIDERVAEASAFLQDDSPHPEEWC

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103160

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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