NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F103157

Metagenome / Metatranscriptome Family F103157

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103157
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 55 residues
Representative Sequence MTAEQIAGIIRALVAAVGGYFVGKGLVDANTVAAIGGALATLATAVWSVVSKKKD
Number of Associated Samples 74
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 92.78 %
% of genes near scaffold ends (potentially truncated) 8.91 %
% of genes from short scaffolds (< 2000 bps) 61.39 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (49.505 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(18.812 % of family members)
Environment Ontology (ENVO) Unclassified
(31.683 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(27.723 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 56.63%    β-sheet: 0.00%    Coil/Unstructured: 43.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF13539Peptidase_M15_4 29.70
PF05257CHAP 5.94
PF01510Amidase_2 3.96
PF13472Lipase_GDSL_2 2.97
PF03837RecT 2.97
PF10124Mu-like_gpT 2.97
PF00149Metallophos 1.98
PF00271Helicase_C 1.98
PF13884Peptidase_S74 1.98
PF01844HNH 0.99
PF01464SLT 0.99
PF09588YqaJ 0.99
PF14359DUF4406 0.99
PF15943YdaS_antitoxin 0.99
PF12684DUF3799 0.99
PF04233Phage_Mu_F 0.99
PF13394Fer4_14 0.99
PF11775CobT_C 0.99
PF02954HTH_8 0.99
PF10651BppU_N 0.99
PF07120DUF1376 0.99
PF05136Phage_portal_2 0.99
PF05866RusA 0.99
PF13481AAA_25 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG3723Recombinational DNA repair protein RecTReplication, recombination and repair [L] 2.97
COG3756Uncharacterized conserved protein YdaU, DUF1376 familyFunction unknown [S] 0.99
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 0.99
COG5511Phage capsid proteinMobilome: prophages, transposons [X] 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.50 %
UnclassifiedrootN/A49.50 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000947|BBAY92_10004895All Organisms → cellular organisms → Bacteria → Proteobacteria3477Open in IMG/M
3300002476|metazooDRAFT_10834431All Organisms → cellular organisms → Bacteria → Proteobacteria667Open in IMG/M
3300003277|JGI25908J49247_10000248All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage16017Open in IMG/M
3300003431|JGI25913J50563_1002379All Organisms → Viruses → Predicted Viral3713Open in IMG/M
3300004369|Ga0065726_12145All Organisms → cellular organisms → Bacteria → Proteobacteria27128Open in IMG/M
3300004481|Ga0069718_10169234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7364Open in IMG/M
3300005416|Ga0068880_1007964All Organisms → Viruses → Predicted Viral4863Open in IMG/M
3300005416|Ga0068880_1388000Not Available602Open in IMG/M
3300005611|Ga0074647_1001876All Organisms → cellular organisms → Bacteria → Proteobacteria7668Open in IMG/M
3300005613|Ga0074649_1025645Not Available3138Open in IMG/M
3300006802|Ga0070749_10000344Not Available30911Open in IMG/M
3300006802|Ga0070749_10121200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1536Open in IMG/M
3300006802|Ga0070749_10126099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1501Open in IMG/M
3300006802|Ga0070749_10263635Not Available973Open in IMG/M
3300006802|Ga0070749_10395704Not Available763Open in IMG/M
3300006802|Ga0070749_10421801All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300006802|Ga0070749_10678911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria551Open in IMG/M
3300006920|Ga0070748_1014917All Organisms → cellular organisms → Bacteria → Proteobacteria3311Open in IMG/M
3300007169|Ga0102976_1173162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2020Open in IMG/M
3300007214|Ga0103959_1289553All Organisms → cellular organisms → Bacteria → Proteobacteria1212Open in IMG/M
3300007541|Ga0099848_1013541All Organisms → Viruses → Predicted Viral3566Open in IMG/M
3300007735|Ga0104988_10488Not Available16142Open in IMG/M
3300008116|Ga0114350_1083961All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300008120|Ga0114355_1169511All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae748Open in IMG/M
3300008266|Ga0114363_1022245All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2778Open in IMG/M
3300008339|Ga0114878_1269140Not Available515Open in IMG/M
3300009009|Ga0105105_10328779Not Available833Open in IMG/M
3300009124|Ga0118687_10099992Not Available1004Open in IMG/M
3300009165|Ga0105102_10081916All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1484Open in IMG/M
3300009165|Ga0105102_10362992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria763Open in IMG/M
3300009168|Ga0105104_10979083Not Available500Open in IMG/M
3300010296|Ga0129348_1007186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4058Open in IMG/M
3300010296|Ga0129348_1170911Not Available747Open in IMG/M
3300010354|Ga0129333_10451325Not Available1132Open in IMG/M
3300010354|Ga0129333_10640362Not Available919Open in IMG/M
3300010354|Ga0129333_10798870Not Available805Open in IMG/M
3300010370|Ga0129336_10077555All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1963Open in IMG/M
3300010389|Ga0136549_10408393Not Available550Open in IMG/M
3300010970|Ga0137575_10063987Not Available582Open in IMG/M
3300012707|Ga0157623_1027995Not Available847Open in IMG/M
3300013005|Ga0164292_10386434Not Available937Open in IMG/M
3300014962|Ga0134315_1031832Not Available816Open in IMG/M
3300017747|Ga0181352_1148973All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage620Open in IMG/M
3300017754|Ga0181344_1008262Not Available3409Open in IMG/M
3300017963|Ga0180437_10103534All Organisms → Viruses → unclassified viruses → Skeletonema virus LDF-2015a2400Open in IMG/M
3300017963|Ga0180437_10242785All Organisms → Viruses → Predicted Viral1394Open in IMG/M
3300017963|Ga0180437_10365575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1083Open in IMG/M
3300017963|Ga0180437_10454895All Organisms → cellular organisms → Bacteria → Proteobacteria949Open in IMG/M
3300017971|Ga0180438_11121005Not Available568Open in IMG/M
3300017987|Ga0180431_10001295Not Available35271Open in IMG/M
3300017991|Ga0180434_11429174Not Available516Open in IMG/M
3300018080|Ga0180433_10422805All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1025Open in IMG/M
3300018080|Ga0180433_10546631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales875Open in IMG/M
3300020514|Ga0208202_1010953All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1172Open in IMG/M
3300021961|Ga0222714_10008273All Organisms → Viruses9313Open in IMG/M
3300021964|Ga0222719_10698117Not Available574Open in IMG/M
3300022179|Ga0181353_1091030Not Available760Open in IMG/M
3300022190|Ga0181354_1216292All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage563Open in IMG/M
3300022198|Ga0196905_1049519All Organisms → Viruses → Predicted Viral1199Open in IMG/M
3300022198|Ga0196905_1127907Not Available663Open in IMG/M
3300022200|Ga0196901_1025049All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium2366Open in IMG/M
3300024492|Ga0255189_1051967Not Available536Open in IMG/M
3300025645|Ga0208643_1070297All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1020Open in IMG/M
3300025646|Ga0208161_1017260Not Available2790Open in IMG/M
3300025646|Ga0208161_1082268All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.928Open in IMG/M
3300025674|Ga0208162_1000845Not Available16723Open in IMG/M
3300025889|Ga0208644_1000432Not Available35303Open in IMG/M
3300025889|Ga0208644_1315013Not Available614Open in IMG/M
3300026993|Ga0209975_1000873All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3058Open in IMG/M
3300026993|Ga0209975_1006351All Organisms → Viruses → Predicted Viral1085Open in IMG/M
3300027079|Ga0255188_1075779All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage596Open in IMG/M
3300027764|Ga0209134_10000026Not Available50297Open in IMG/M
3300027793|Ga0209972_10001400Not Available21179Open in IMG/M
3300027900|Ga0209253_10758062Not Available694Open in IMG/M
3300027917|Ga0209536_100114260All Organisms → Viruses → Predicted Viral3428Open in IMG/M
3300027917|Ga0209536_100862398All Organisms → cellular organisms → Bacteria → Proteobacteria1120Open in IMG/M
3300031539|Ga0307380_10297042All Organisms → Viruses → Predicted Viral1501Open in IMG/M
3300031565|Ga0307379_10769862All Organisms → cellular organisms → Bacteria → Proteobacteria853Open in IMG/M
3300031669|Ga0307375_10659720All Organisms → cellular organisms → Bacteria → Proteobacteria608Open in IMG/M
3300031673|Ga0307377_10069174All Organisms → cellular organisms → Bacteria2928Open in IMG/M
3300031673|Ga0307377_10074561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2799Open in IMG/M
3300031758|Ga0315907_10011749All Organisms → cellular organisms → Bacteria8596Open in IMG/M
3300031758|Ga0315907_10029798All Organisms → Viruses → Predicted Viral4940Open in IMG/M
3300031758|Ga0315907_11017737Not Available596Open in IMG/M
3300031885|Ga0315285_10256995All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1344Open in IMG/M
3300033416|Ga0316622_100237591Not Available1969Open in IMG/M
3300033816|Ga0334980_0291916Not Available634Open in IMG/M
3300033980|Ga0334981_0316852Not Available687Open in IMG/M
3300033981|Ga0334982_0296111Not Available763Open in IMG/M
3300034018|Ga0334985_0000488Not Available30155Open in IMG/M
3300034018|Ga0334985_0001921Not Available16621Open in IMG/M
3300034023|Ga0335021_0508313Not Available611Open in IMG/M
3300034062|Ga0334995_0535802Not Available695Open in IMG/M
3300034068|Ga0334990_0518326All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage633Open in IMG/M
3300034101|Ga0335027_0088330Not Available2392Open in IMG/M
3300034101|Ga0335027_0297853Not Available1091Open in IMG/M
3300034279|Ga0335052_0000091Not Available54218Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous18.81%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake12.87%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater12.87%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment9.90%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.94%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil4.95%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.96%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.96%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.97%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater2.97%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.98%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment1.98%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.98%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.99%
LakeEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake0.99%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.99%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.99%
Surface WaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water0.99%
Pond Fresh WaterEnvironmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water0.99%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment0.99%
SalineEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline0.99%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.99%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.99%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.99%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.99%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300002476Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003431Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300004369Saline microbial communities from the South Caspian sea - cas-15EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005416Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel2S_0400h metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005611Saline surface water microbial communities from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007169Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007214Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projectsEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007735Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014OctEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008339Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Sept 29, 2014 all contigsEnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300010970Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV1, april 2016EnvironmentalOpen in IMG/M
3300012707Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300014962Surface water microbial communities from Bangladesh - BaraHaldiaSW0309EnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300017987Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaGEnvironmentalOpen in IMG/M
3300017991Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300020514Freshwater microbial communities from Lake Mendota, WI - 27AUG2008 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300024492Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_8hEnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026993Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027079Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepB_8hEnvironmentalOpen in IMG/M
3300027764Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031885Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36EnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300033980Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300034018Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021EnvironmentalOpen in IMG/M
3300034023Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034068Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034279Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
BBAY92_1000489563300000947Macroalgal SurfaceMTGEQIAGVVRALVAAVGGYFVGKGLVDAETVTTIGGAVATLATAAWSIYAKRA*
metazooDRAFT_1083443123300002476LakeMTGEQIAGIVRTVVSAVGGYLVGKGVIDANTVVAVAGALATLAAAAWSVYSKQKPQA*
JGI25908J49247_10000248173300003277Freshwater LakeMKQDQIAGIVRAVVAAVGGYFIGKGMVDAANVEIIAGALATLATAAWSVWAKKA*
JGI25913J50563_100237953300003431Freshwater LakeMTSDQISGIVRALVSAIGGYFVGRGIVDADTVSSVGGALATIATAVWSFQSKKSV*
Ga0065726_12145133300004369SalineMTAEQVAGIVRALVAAVGGYLVGRGFVDGETVAAVGGALATLVTAVWSVISKKDKASA*
Ga0069718_10169234103300004481SedimentMTGEQIAGVVRAIVAAVGGYFIGQGLVDAETVTAIGGAAATLAAAAWSIYSKRA*
Ga0068880_100796473300005416Freshwater LakeMTGEQIAGIVRALAASVGGFFVAKGVVDSETVLAVSGALATLAVAAWSVWSKRKAA*
Ga0068880_138800013300005416Freshwater LakeMSAEQIAGIIRALVAAVGGYFVGKGLVDANTVAAIGGALATLATAVWSVVSKKKD*
Ga0074647_100187633300005611Saline Water And SedimentMTAEQVAGIVRALVAAVGGYLVGRGFVDGETVSAVGGALATLITAIWSVTSQKDKAPA*
Ga0074649_102564523300005613Saline Water And SedimentMTAEQVAGIVRALVAAVGGYLVGRGFVDGETVSAVGGALAPLVTAVWSVISKKDKASA*
Ga0075461_1024130413300006637AqueousMTAEQVAGIIRAAVAAVGGYFVGKGMVDADTVATIGGALATLGTA
Ga0070749_10000344113300006802AqueousMTAEQVAGIVRALVAAVGGYLVGRGFVDGETVSAIGGALATLVTAVWSVISKRDKASA*
Ga0070749_1012120023300006802AqueousMMTAEQVAGIVRALVAAVGGYLVGKGLVDADTVSAVGGGLATVATAVWSVWSKRA*
Ga0070749_1012609923300006802AqueousMMTAEQVAGIVRALVAAVGGYLVGKGLVDADTVSAVGGGLATVATAVWSVWSKRDA*
Ga0070749_1026363523300006802AqueousMTAEQVAGIIRAAVAAVGGYFVGKGMVDADTVATIGGALATLGTAVWSVWAKQEK*
Ga0070749_1039570423300006802AqueousMTAEQVAGIVRALVAAVGGYLVGRGFVDGETVSAVGGALATLVTAVWSVISKKDKASA*
Ga0070749_1042180113300006802AqueousMTADQVAGVVRALVAAIGGYLVGKGLVDADTVSAVGGGLATVATAVWSVWSKRDA*
Ga0070749_1067891123300006802AqueousMTGEQIAGVIRALSAAIGGYFVGKGVVDADTVAAIGGGLATVATAIWSIWSKKQAGK*
Ga0070748_101491733300006920AqueousMKQDQIAGIVRAVVAAVGGYFIGKGSIDSANVEIIAGALATLATAAWSVWAKKA*
Ga0102976_117316223300007169Freshwater LakeMTGEQIAGVVRAIVAALGGYFVGQGVTDAETVATIGGAAATLAAAVWSIYAKRSA*
Ga0103959_128955333300007214Freshwater LakeMKFITGEQVAGVVRAIIAAVGGYFVGQGVVDSETVVAVAGAAATIATAVWSVWAKRA*
Ga0099848_101354123300007541AqueousMTAEQIAGIVRALVAAVGGYLVGRGFVDGETVSAVGGALATLVTAVWSVISKKDKASA*
Ga0104988_10488243300007735FreshwaterMTAEQFAGICRAIVAALGGYLVGKGITDAETVAAVGGAVATIGAAVWSVLSKRPPAPQA*
Ga0114350_108396133300008116Freshwater, PlanktonMTAEQIAGIIRALVAAVGGYFVGKGLVDANTVAAIGGALATLATAVWSVVSKKKD*
Ga0114355_116951123300008120Freshwater, PlanktonMTAEQIAGIIRALVAAVGGYFVVKGLVDANTVAAIGGALATLATAVWSVVSKKKD*
Ga0114363_102224543300008266Freshwater, PlanktonMSAEQIAGIVRALVAAIGGYFVGKGLVDANTVAAVGGALATLATAVWSVVSKKKD*
Ga0114878_112274413300008339Freshwater LakeMTAEQIAGIIRALVAAVGGYFVGKGLVDANTVAAIGGALATLATA
Ga0114878_126914013300008339Freshwater LakeGIIRALVAAVGGYFVGKGLVDANTVAAIGGALATLATAVWSVVSKKKD*
Ga0105105_1032877923300009009Freshwater SedimentMTGEQLAGVVRAIIAALGGYLVGQGVTDAETVTTIGGAAATLVATLWSIRAKRKVE*
Ga0118687_1009999233300009124SedimentMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWAKKQADK*
Ga0105102_1008191643300009165Freshwater SedimentMTGEQIAGVVRAIVAAAGGYFVGQGLVDAETVTAIGGAAATLAAAVWSIYSKRA*
Ga0105102_1036299223300009165Freshwater SedimentMTGEQIAGVVRAIVAALGGYFVGQGVVDAETVTTIGGAVATLAAAAWSIYAKRA*
Ga0105104_1097908333300009168Freshwater SedimentMTGEQIAGVVRAIVAALGGYFVGQGVVDAETVTTIGGAVATLAAAVWSIYAKRA*
Ga0129348_100718633300010296Freshwater To Marine Saline GradientMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWSKKQADK*
Ga0129348_117091123300010296Freshwater To Marine Saline GradientMTGEQIAGVIRALSAAIGGYFVGKGVVDADTVAAIGGGLATVATAIWSIWAKKQAGK*
Ga0129333_1045132523300010354Freshwater To Marine Saline GradientMNAEQFAGIVRAIVAAVGGYLVGKGLADAETVAAVSGAVATIAVAVWSVLSKKKD*
Ga0129333_1064036223300010354Freshwater To Marine Saline GradientMMMTAEQFAGIVRAIVAAVGGYLVGKGLADAETVAAVSGAVATIAVAVWSVLAKKQKD*
Ga0129333_1079887013300010354Freshwater To Marine Saline GradientMTSEQIAGIVRAIAASVGGFFVAKGVVDSETVLAVSGALATLVVAAWSVWSKRKSA*
Ga0129336_1007755533300010370Freshwater To Marine Saline GradientMNAEQFAGIVRAIVAAVGGYLVGKGLADAETVAAVSGAVATIAVAVWSVLSKKKPEAA*
Ga0136549_1040839313300010389Marine Methane Seep SedimentMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWSKKQVGK*
Ga0137575_1006398723300010970Pond Fresh WaterMTSDQISGIIRALVAAIGGYFVGKGVVDADTVSSVGGALATIATAVWSFQSKKGA*
Ga0157623_102799513300012707FreshwaterMTGEQIAGIVRALVAAVGGYLVGKGFADAETVAAVAGAAATLVVAVWSFYSKKKAEPQA*
Ga0164292_1038643413300013005FreshwaterMTGEQIAGIVRALVAAVGGYFVGKGFADAETVAAVAGAAATLVVAVWSVYSKKKAEPQA*
Ga0134315_103183213300014962Surface WaterMSGEQVGGIVRAVVAAVGGYLVGRGMVDNETVMTVSGALATIATAVWSVISKKKPA*
Ga0181352_114897323300017747Freshwater LakeMTAEQIAGIVRAVVSAVGGYLIGKGLADAETVAAVGGALATLAVAAWSVLSKKKPEAA
Ga0181344_100826243300017754Freshwater LakeMTGEQIAGVVRAIVAAVGGYFVGQGVVDGETVATIGGALATLVTAAWSVWSKK
Ga0181343_117239713300017766Freshwater LakeMDSAQIGGIVRALVAAVGGYFVGQGMVDAETVTTIGGAVATLAVA
Ga0180437_1010353423300017963Hypersaline Lake SedimentMTGEQIAGVIRALAAAIGGYFVGKGMVDADTVSAIGGGLATVATAVWSIWSKQKIPKDPA
Ga0180437_1024278523300017963Hypersaline Lake SedimentMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWAKQQAGK
Ga0180437_1036557523300017963Hypersaline Lake SedimentMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWSKKQADK
Ga0180437_1045489523300017963Hypersaline Lake SedimentMTGEQIAGVIRALSAAIGGYFVGKGIVDADTVAAIGGGLATVATAIWSIWAKKQAGK
Ga0180438_1112100523300017971Hypersaline Lake SedimentMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWA
Ga0180431_10001295133300017987Hypersaline Lake SedimentMTGEQIAGVIRALSAAIGGYFVGKGVVDADTVAAIGGGLATVATAIWSIWSKKQVGK
Ga0180434_1073306823300017991Hypersaline Lake SedimentIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWAKKQAGK
Ga0180434_1142917423300017991Hypersaline Lake SedimentMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWAKQQA
Ga0180433_1042280533300018080Hypersaline Lake SedimentMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWAKK
Ga0180433_1054663123300018080Hypersaline Lake SedimentMTGEQIAGVIRALSAAIGGYFVGKGVVDADTVAAIGGGLATVATAIWSIWAKKQAGK
Ga0208202_101095333300020514FreshwaterMNAEQIAGIVRAVVAAVGGYLVGKGLADAETVAAVGGALATLAVAVWSVLSKKKPEAA
Ga0222714_1000827393300021961Estuarine WaterMTGEQIAGVVRALVAAVGGYFVGQGLVDAETVTTIGGAVATLAAAAWSIYAKRA
Ga0222719_1069811723300021964Estuarine WaterMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWAKKQAGK
Ga0181353_109103023300022179Freshwater LakeMTGEQIAGVVRALVAAVGGYFIGQGLVDAETVTTIGGAAATLAAAVWSIYSKRA
Ga0181354_121629223300022190Freshwater LakeMKQDQIAGIVRAVVAAVGGYFIGKGMVDAANVEIIAGALATLATAAWSVWAKKA
Ga0196905_104951923300022198AqueousMTAEQVAGIVRALVAAVGGYLVGRGFVDGETVSAVGGALATLVTAVWSVISKKDKASA
Ga0196905_112790723300022198AqueousMTAEQVAGIIRAAVAAVGGYFVGKGMVDADTVATIGGALATLGTAVWSVWAKQEK
Ga0196901_102504953300022200AqueousQIAGIVRALVAAVGGYLVGRGFVDGETVSAVGGALATLVTAVWSVISKKDKASA
Ga0255189_105196723300024492FreshwaterMNAEQFAGIVRAIVAAVGGYLVGKGLADAETVAAVSGAVATIAVAVWSVLSKKKD
Ga0208643_107029723300025645AqueousMKQDQIAGIVRAVVAAVGGYFIGKGSIDSANVEIIAGALATLATAAWSVWAKKA
Ga0208161_101726033300025646AqueousMTAEQIAGIVRALVAAVGGYLVGRGFVDGETVSAVGGALATLVTAVWSVISKKDKASA
Ga0208161_108226813300025646AqueousMTAEQVAGIIQAAVAAVGGYFVGKGMVDADTVATIGGALATLGTAVWSVWAKQEK
Ga0208162_100084593300025674AqueousMTGEQIAGVIRALAAAIGGYFVGKGMVDADTVSAIGGGLATVATAIWSIWSKQKIPKDPA
Ga0208644_1000432133300025889AqueousMTAEQVAGIVRALVAAVGGYLVGRGFVDGETVSAIGGALATLVTAVWSVISKRDKASA
Ga0208644_131501323300025889AqueousMMTAEQVAGIVRALVAAVGGYLVGKGLVDADTVSAVGGGLATVATAVWSVWSKRA
Ga0209975_100087333300026993Freshwater LakeMSAEQIAGIIRALVAAVGGYFVGKGLVDANTVAAIGGALATLATAVWSVVSKKKD
Ga0209975_100635123300026993Freshwater LakeMTGEQIAGIVRALAASVGGFFVAKGVVDSETVLAVSGALATLAVAAWSVWSKRKAA
Ga0255188_107577913300027079FreshwaterMNAEQFAGIVRAIVAAVGGYLVGKGLADAETVAAVSGAVATIAVAVWSVLSKKKPEAA
Ga0209134_10000026233300027764Freshwater LakeMTSDQISGIVRALVSAIGGYFVGRGIVDADTVSSVGGALATIATAVWSFQSKKSV
Ga0209972_1000140053300027793Freshwater LakeMTAEQIAGIIRALVAAVGGYFVGKGLVDANTVAAIGGALATLATAVWSVVSKKKD
Ga0209253_1075806223300027900Freshwater Lake SedimentMTGEQIAGVVRAIVAAVGGYFVGQGLVDAETVTTIGGAVATLAAAAWSIYAKRA
Ga0209536_10011426033300027917Marine SedimentMTGEQIAGIVRALSAAIGGWLVGRGVVDADTVTAVGGALATIATAVWSVWAKRTIPKDPA
Ga0209536_10086239833300027917Marine SedimentMTGEQIAGVIRALSAAIGGYFVGKGLVDADTVAAIGGGLATVATAIWSIWSKKQVGK
Ga0307380_1029704223300031539SoilMITGEQIAGIVRAIVAALGGYLVGQGMVDAETMTAVAGAAATIAAAGWSVWSKNR
Ga0307379_1076986223300031565SoilMTAEQVAGIVRALIAAIGGYLVGRGFVDAETVTAVGGAAATIAAAIWSVVSKRKVEPQA
Ga0307375_1065972023300031669SoilMTAEQVAGIVRALIAAIGGYLVGRGFVDAETVTAVGGAAATIAAAIWSVVSKRKVEPQ
Ga0307377_1006917473300031673SoilMVASAISMERKMITGEQIAGIVRAIVAALGGYLVGQGMVDAETMTAVAGAAATIAAAGWSVWSKNR
Ga0307377_1007456113300031673SoilMITGEQMAGIVRAIVAALGGYLVGQGMVDAETMTAVAGAAATIATAGWSVWSK
Ga0315907_10011749253300031758FreshwaterMSAEQIAGIVRALVAAIGGYFVGKGLVDANTVAAVGGALATLATAVWSVVSKKKD
Ga0315907_1002979813300031758FreshwaterMTGEQIAGIVRALAASVGGFFVAKGVVDSETVLAVSGALATLAVAAWSVWSK
Ga0315907_1101773713300031758FreshwaterMTAEQIAGIIRALVAAVGGYFVGKGLVDANTVAAIGGALATLATAVWSV
Ga0315285_1025699523300031885SedimentLEIQMKQDQIAGIVRAVVAAVGGYFIGKGMVDAANVEIIAGALATLATAAWSVWAKKA
Ga0316622_10023759153300033416SoilMTGEQIAGVVRAIVAAVGGYFVGKGLVDAETVTTIGGAVATLAAAAWSIYSKRA
Ga0334980_0291916_24_2063300033816FreshwaterMNMNAEQIAGIVRAVVAAVGGYLVGKGLADAETVAAVGGALATLAVAVWSVLSKKKPEAA
Ga0334981_0316852_329_4993300033980FreshwaterMTGEQIAGIVRALAASLGGFFVAKGVVDSETVLAVSGALATLAVAAWSWWSKRKAD
Ga0334982_0296111_372_5363300033981FreshwaterMTGEQIAGVVRALVAAVGGYFVGQGLVDTETVTTIGGAVATLAAAAWSIYAKRA
Ga0334985_0000488_14073_142523300034018FreshwaterMTSEQIAGIVRALVAAVGGYFVGKGFADAETVAAVAGAAATLVVAVWSVYSKKKAEPQA
Ga0334985_0001921_16424_165883300034018FreshwaterMTGEQIAGVVRALVAAVGGYFVGKGLVDAETVTTIGGAVATLATAAWSIYSKRA
Ga0335021_0508313_48_2123300034023FreshwaterMTGEQIAGVVRAIIAAVGGYFIGQGLVDAETVTTIGGAVATLAAAAWSIYSKRA
Ga0334995_0535802_172_3483300034062FreshwaterMTAEQIAGIVRAVVAAVGGYLVGKGFADAETVAAVGGALATIAVAVWSVRSKKKPEAV
Ga0334990_0518326_85_2493300034068FreshwaterMKQEQIAGIVRAVVAAVGGYFIGKGMVDAANVEIIAGALATLATAAWSVWAKKA
Ga0335027_0088330_1383_15443300034101FreshwaterMTKEQIAGVVRAVVAAVGGYFVGKGVIDGETVAAISGALATLATAAWSVWSKK
Ga0335027_0297853_891_10613300034101FreshwaterMTGEQISGIVRALAASLGGFFVAKGVVDSETVLAVSGALATLAVAAWSVWSKRKSA
Ga0335052_0000091_24120_242933300034279FreshwaterMDGEQIAGVVRALVAAVGGYFVGMGMIDTNTVVAVAGALGTIAAAVWSVLSKQKKNA


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