Metagenome Family F103144

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103144
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	76 residues
Representative Sequence	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGI
Number of Associated Samples	77
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	61.39 %
% of genes near scaffold ends (potentially truncated)	22.77 %
% of genes from short scaffolds (< 2000 bps)	86.14 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.485 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (19.802 % of family members)
Environment Ontology (ENVO)	Unclassified (62.376 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.366 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.86% β-sheet: 25.71% Coil/Unstructured: 51.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.72.1.0: automated matches	d4b8ra_	4b8r	0.55976
c.72.1.0: automated matches	d3kzha_	3kzh	0.55842
c.55.1.2: Acetokinase-like	d1saza1	1saz	0.55517
c.1.10.1: Class I aldolase	d4cnna_	4cnn	0.55253
c.1.28.1: Biotin synthase	d1r30a_	1r30	0.54879

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF08401	ArdcN	23.76
PF04315	EpmC	4.95
PF10263	SprT-like	1.98
PF01521	Fe-S_biosyn	0.99
PF00166	Cpn10	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	23.76
COG3101	Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	4.95
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
All Organisms	root	All Organisms	48.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Viruses	superkingdom	All Organisms → Viruses	40.59 %
cellular organisms	root	All Organisms → cellular organisms	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	30.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	30.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	30.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	30.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.90 %
Desulfurellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales	2.97 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.98 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.90 %
unclassified Desulfurellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales	2.97 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.99 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.99 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.90 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	2.97 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.99 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.99 %
Rhodoplanes elegans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.90 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	2.97 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.99 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.99 %
Rhodoplanes elegans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001844\|RCM35_1081870	Not Available	663	Open in IMG/M
3300001851\|RCM31_10085430	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1693	Open in IMG/M
3300002408\|B570J29032_109388516	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	730	Open in IMG/M
3300002408\|B570J29032_109650381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	993	Open in IMG/M
3300002408\|B570J29032_109685465	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1054	Open in IMG/M
3300002835\|B570J40625_100776393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	846	Open in IMG/M
3300004240\|Ga0007787_10251908	Not Available	868	Open in IMG/M
3300005583\|Ga0049085_10253897	Not Available	576	Open in IMG/M
3300006639\|Ga0079301_1038901	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1574	Open in IMG/M
3300006639\|Ga0079301_1200224	Not Available	573	Open in IMG/M
3300006805\|Ga0075464_10781463	Not Available	593	Open in IMG/M
3300007162\|Ga0079300_10167463	Not Available	588	Open in IMG/M
3300007973\|Ga0105746_1360981	Not Available	508	Open in IMG/M
3300008116\|Ga0114350_1063546	All Organisms → Viruses → Predicted Viral	1288	Open in IMG/M
3300008120\|Ga0114355_1041654	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2171	Open in IMG/M
3300008448\|Ga0114876_1245412	Not Available	561	Open in IMG/M
3300009081\|Ga0105098_10049978	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1702	Open in IMG/M
3300009152\|Ga0114980_10080320	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1956	Open in IMG/M
3300009152\|Ga0114980_10137760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	1450	Open in IMG/M
3300009159\|Ga0114978_10144659	All Organisms → Viruses → Predicted Viral	1536	Open in IMG/M
3300009159\|Ga0114978_10192583	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1292	Open in IMG/M
3300009160\|Ga0114981_10058453	All Organisms → Viruses → Predicted Viral	2154	Open in IMG/M
3300009164\|Ga0114975_10411299	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	737	Open in IMG/M
3300009164\|Ga0114975_10528609	Not Available	634	Open in IMG/M
3300009165\|Ga0105102_10782927	Not Available	542	Open in IMG/M
3300009165\|Ga0105102_10867124	Not Available	518	Open in IMG/M
3300009168\|Ga0105104_10370632	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	794	Open in IMG/M
3300009168\|Ga0105104_10744117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	566	Open in IMG/M
3300009180\|Ga0114979_10479015	Not Available	721	Open in IMG/M
3300009183\|Ga0114974_10402868	Not Available	783	Open in IMG/M
3300009183\|Ga0114974_10566084	Not Available	630	Open in IMG/M
3300009184\|Ga0114976_10557291	Not Available	585	Open in IMG/M
3300009184\|Ga0114976_10598393	Not Available	560	Open in IMG/M
3300010354\|Ga0129333_10121580	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2405	Open in IMG/M
3300010885\|Ga0133913_12521016	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1252	Open in IMG/M
3300010885\|Ga0133913_12558350	Not Available	1241	Open in IMG/M
3300011115\|Ga0151514_10364	Not Available	20043	Open in IMG/M
3300013004\|Ga0164293_10780461	Not Available	607	Open in IMG/M
3300013005\|Ga0164292_10401426	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	915	Open in IMG/M
3300014811\|Ga0119960_1070235	Not Available	614	Open in IMG/M
3300014811\|Ga0119960_1082322	Not Available	574	Open in IMG/M
3300014962\|Ga0134315_1016808	All Organisms → Viruses → Predicted Viral	1139	Open in IMG/M
3300015050\|Ga0181338_1052824	Not Available	591	Open in IMG/M
3300017723\|Ga0181362_1013789	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1739	Open in IMG/M
3300017747\|Ga0181352_1162242	Not Available	587	Open in IMG/M
3300017747\|Ga0181352_1179865	Not Available	549	Open in IMG/M
3300017747\|Ga0181352_1190654	Not Available	530	Open in IMG/M
3300017754\|Ga0181344_1049409	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1256	Open in IMG/M
3300017754\|Ga0181344_1126016	Not Available	736	Open in IMG/M
3300017754\|Ga0181344_1210149	Not Available	544	Open in IMG/M
3300017777\|Ga0181357_1096231	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1125	Open in IMG/M
3300017785\|Ga0181355_1036332	All Organisms → Viruses → Predicted Viral	2117	Open in IMG/M
3300017785\|Ga0181355_1044460	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	1898	Open in IMG/M
3300019781\|Ga0181360_121467	Not Available	522	Open in IMG/M
3300019784\|Ga0181359_1240709	Not Available	555	Open in IMG/M
3300020048\|Ga0207193_1442576	Not Available	863	Open in IMG/M
3300020172\|Ga0211729_10659908	All Organisms → Viruses → Predicted Viral	1375	Open in IMG/M
3300020179\|Ga0194134_10157468	Not Available	1023	Open in IMG/M
3300020506\|Ga0208091_1033007	Not Available	575	Open in IMG/M
3300020530\|Ga0208235_1024988	Not Available	725	Open in IMG/M
3300020554\|Ga0208599_1027890	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300021091\|Ga0194133_10158569	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1595	Open in IMG/M
3300021519\|Ga0194048_10064466	Not Available	1452	Open in IMG/M
3300021952\|Ga0213921_1007944	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300021962\|Ga0222713_10134365	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1728	Open in IMG/M
3300022179\|Ga0181353_1035447	All Organisms → Viruses → Predicted Viral	1324	Open in IMG/M
3300022179\|Ga0181353_1094032	Not Available	744	Open in IMG/M
3300022179\|Ga0181353_1126458	Not Available	607	Open in IMG/M
3300023184\|Ga0214919_10047140	Not Available	4175	Open in IMG/M
3300027114\|Ga0208009_1025623	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1274	Open in IMG/M
3300027518\|Ga0208787_1135831	Not Available	560	Open in IMG/M
3300027693\|Ga0209704_1174546	Not Available	625	Open in IMG/M
3300027734\|Ga0209087_1034029	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2419	Open in IMG/M
3300027759\|Ga0209296_1156514	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300027763\|Ga0209088_10010374	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5048	Open in IMG/M
3300027763\|Ga0209088_10063099	All Organisms → Viruses → Predicted Viral	1769	Open in IMG/M
3300027764\|Ga0209134_10235204	Not Available	629	Open in IMG/M
3300027785\|Ga0209246_10411731	Not Available	507	Open in IMG/M
3300027804\|Ga0209358_10467617	Not Available	580	Open in IMG/M
3300027899\|Ga0209668_10820799	Not Available	626	Open in IMG/M
3300027900\|Ga0209253_10045281	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3660	Open in IMG/M
3300027956\|Ga0209820_1020096	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1700	Open in IMG/M
3300027969\|Ga0209191_1190064	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	814	Open in IMG/M
3300031857\|Ga0315909_10081532	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2853	Open in IMG/M
3300031951\|Ga0315904_10167192	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2204	Open in IMG/M
3300031952\|Ga0315294_11186007	Not Available	621	Open in IMG/M
3300031952\|Ga0315294_11438533	Not Available	543	Open in IMG/M
3300033993\|Ga0334994_0098050	Not Available	1727	Open in IMG/M
3300033993\|Ga0334994_0188225	All Organisms → Viruses → Predicted Viral	1127	Open in IMG/M
3300034019\|Ga0334998_0551292	Not Available	635	Open in IMG/M
3300034061\|Ga0334987_0204666	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1385	Open in IMG/M
3300034062\|Ga0334995_0023035	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5502	Open in IMG/M
3300034062\|Ga0334995_0137355	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1785	Open in IMG/M
3300034062\|Ga0334995_0174161	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1526	Open in IMG/M
3300034071\|Ga0335028_0717244	Not Available	522	Open in IMG/M
3300034092\|Ga0335010_0557375	Not Available	590	Open in IMG/M
3300034102\|Ga0335029_0141607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	1655	Open in IMG/M
3300034104\|Ga0335031_0488897	Not Available	751	Open in IMG/M
3300034112\|Ga0335066_0090203	Not Available	1952	Open in IMG/M
3300034122\|Ga0335060_0359239	Not Available	781	Open in IMG/M
3300034283\|Ga0335007_0092600	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2252	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.05%
Terrestrial	Environmental → Terrestrial	4.95%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	91.09%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.95%
Marine	Environmental → Aquatic → Marine	3.96%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	46.53%
Lentic	Environmental → Aquatic → Freshwater → Lentic	29.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.93%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.96%
Coastal	Environmental → Aquatic → Marine → Coastal	2.97%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Creek	Environmental → Aquatic → Freshwater → Creek	0.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.56%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	23.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.93%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.95%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.97%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.97%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	19.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	18.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	16.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	4.95%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.97%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.97%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.98%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.98%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.98%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	1.98%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.99%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.99%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.99%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.99%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.99%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.99%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.99%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.99%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001844	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM35, ROCA_DNA220_0.2um_bLM_C_3a	Environmental	Open in IMG/M
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007162	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011115	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016May	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental	Open in IMG/M
3300014962	Surface water microbial communities from Bangladesh - BaraHaldiaSW0309	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019781	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM15.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020530	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021952	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MG	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM35_10818702	3300001844	Marine Plankton	MIYEQYFEGRKPSSNQVIQCIKRGLKQGHVDFEVSWGENMVTLQKNQNNTWHGWGWIKNISGHELAEQFNREGA*
RCM31_100854303	3300001851	Marine Plankton	MIYEQYFDGRKPSEKQVIEAIKRGLSRGHNQFEIAWGENMVTLEKGRAGPNTWHGWGWIKNISGHELAEQFNREGA*
B570J29032_1093885162	3300002408	Freshwater	MVYEQYFDDRKPSENQVINAIKRGLSKGFSQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGV*
B570J29032_1096503812	3300002408	Freshwater	MIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI*
B570J29032_1096854652	3300002408	Freshwater	MNIYEQYFDGRKPSENQVIQAIKRGLSKNYNQFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI*
B570J40625_1007763931	3300002835	Freshwater	MNIYEQYFDGRKPSENQVIQAIKRGLSKNYNQFEIAWGENMVTLEKGRAGVNTWHGWGWIKNI
Ga0007787_102519082	3300004240	Freshwater Lake	MIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV*
Ga0049085_102538972	3300005583	Freshwater Lentic	MSIYEQYFDGRKPSKNQVIQAIKRGLSRGHVQFEIAWGENMVSLEKGRAGVNTWLGYGWIKNISGSDLADQFNKEGA*
Ga0079301_10389013	3300006639	Deep Subsurface	MSIYEQYFDDRKPSENQVINAIKRGLSKGFFQFEISWGENMVTLEKGRAGVNQWHGWGWIKSISGHELAEQFNREGI*
Ga0079301_12002242	3300006639	Deep Subsurface	MNIYEHYFDGKKPSKNQVIQAIKQGVNQGYHMFEVSWGENMVTLDRQAGGRWAGWGWIKNISGDDLANQFNQEGI*
Ga0075464_107814631	3300006805	Aqueous	KPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV*
Ga0079300_101674632	3300007162	Deep Subsurface	MIYEQYFDGRKPSENQVIEAIKRGLSRGHYQFEIAWGENMVTLEKGRSGVNQWIGWGWIKNISGSDLADQFNQEGI*
Ga0105746_13609811	3300007973	Estuary Water	GRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI*
Ga0114350_10635463	3300008116	Freshwater, Plankton	MYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNTWHGWGWIKNISG
Ga0114355_10416544	3300008120	Freshwater, Plankton	MYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI*
Ga0114876_12454121	3300008448	Freshwater Lake	MIYEQYFDGRKPSENQVIEAIKRGLSRGHYQFEIAWGENMVTLEKGRSGVNQWIGWGWIKNISGSDLADQFNREGI*
Ga0105098_100499782	3300009081	Freshwater Sediment	MIYEQYFDGRKPSKNQVIQAIKRGLSKQYDQFEIAWGENMVTLEKGRIAPNTWHGYGWIKNISGDDLANQFNREGI*
Ga0114980_100803203	3300009152	Freshwater Lake	MVMVKNQEKRSYVMSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV*
Ga0114980_101377602	3300009152	Freshwater Lake	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGI*
Ga0114978_101446594	3300009159	Freshwater Lake	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGV*
Ga0114978_101925834	3300009159	Freshwater Lake	YEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV*
Ga0114981_100584534	3300009160	Freshwater Lake	MYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV*
Ga0114975_104112993	3300009164	Freshwater Lake	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGV*
Ga0114975_105286091	3300009164	Freshwater Lake	TIRSSTMYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEIAWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGI*
Ga0105102_107829272	3300009165	Freshwater Sediment	MSIFEEYFEGRKPSKNQVIQAIKQGVKQGYHMFEVSWGENMVTLDRQAGGRWAGWGWIKNISGSDLADQLNQEGI*
Ga0105102_108671241	3300009165	Freshwater Sediment	MGGLVMSIYEHYFEGRKPSEKQVIQVIKQGVKQGYHMFEIAWGENMVTLDKQSSNRWAGWGWIKSISGHELAEQFNREGI*
Ga0105104_103706322	3300009168	Freshwater Sediment	MGGLVMSIYEHYFEGRKPSEKQVIQAIKQGVKQGYHMFEIAWGENMVTLDKQSSNRWAGWGWIKSISGHELAEQFNREGI*
Ga0105104_107441172	3300009168	Freshwater Sediment	MGGLIMSIYEQYFDGRKPSENQVIQAIKRGTKQGHADFEISWGENMVTLQKNLNGTWFGWGWIKNISGSDLADQFNREGL*
Ga0114979_104790151	3300009180	Freshwater Lake	PSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGI*
Ga0114974_104028682	3300009183	Freshwater Lake	MYEQYFDGRKPSEKQVIQAIKRGLNQGHVQFEISWGENMVTLEKGRAGPNTWHGWGWIKSISGHELAEQFNREGV*
Ga0114974_105660842	3300009183	Freshwater Lake	MIYEQYFDGRKPSENQVIQAIKRGLSRDHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGV*
Ga0114976_105572911	3300009184	Freshwater Lake	MIYEQYFDGRKPSENQVINAIKRGLSKGFSQFEIAWGENMVTLEKGRVGVNTWHGWGWIKNISGSDLADQFNREGI*
Ga0114976_105983931	3300009184	Freshwater Lake	ENQVIQAIKRGLSRGHVQFEIAWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGI*
Ga0129333_101215803	3300010354	Freshwater To Marine Saline Gradient	MIYEQYFDGRKPSKHQVIEAIRRGLSRGHNQFEIAWGENMVELEKGRAGPNTWIGWGWIKDISGSDLADQLNKEGA*
Ga0133913_125210161	3300010885	Freshwater Lake	KPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGI*
Ga0133913_125583503	3300010885	Freshwater Lake	MIYEQYFDGRKPSEKQVIQAIKRGLTGGHNQFEIAWGENMVTLEKGRAGPNLWHGWGWIKTISGHELAEQFNREGI*
Ga0151514_1036436	3300011115	Freshwater	MIYDHYFDGRKPSKNQVIQAIKRGLKEGHVQFEISWGENMVTLEKGRAGPNIWHGHGWIKNISGSDLADQFNKEGA*
Ga0164293_107804612	3300013004	Freshwater	MVTAKNQEKRSYAMSIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGL*
Ga0164292_104014262	3300013005	Freshwater	MVTAKNQEKRSYAMSIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWI
Ga0119960_10702351	3300014811	Aquatic	MIYEQYFDGRKPSESQVINAIKRGLSKGFSQFEIAWGENMVTLEKGRAGANQWHGWGWIKNISGHELAEQFNREGI*
Ga0119960_10823221	3300014811	Aquatic	FPSHDRGGLIMSIYEEYFSERKPSEKQVIQSIKRGLREGFADFEISWGENMVTLQKNRDNTWFGWGWIKSISGHELAEQFNREGI*
Ga0134315_10168082	3300014962	Surface Water	MSIYEQYFDGRKPSKNQVIQAIKRGLSRGHVQFEIAWGENMVTLEKGRAGPNTWHGWGWIKNISGHELAEQFNREGI*
Ga0181338_10528241	3300015050	Freshwater Lake	MSIYEQYFDGRKPSENQVINAIKRGLSKGFSQFELSWGENMVTLEKGRAGVNQWIGWGWIKNISGSDLADQFNREGI*
Ga0181362_10137892	3300017723	Freshwater Lake	MYEQYFDGRKPSKNQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGI
Ga0181352_11622422	3300017747	Freshwater Lake	MIYEQYFDGRKPSENQVINAIKRGLSKGFSQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGI
Ga0181352_11798651	3300017747	Freshwater Lake	MSIYEQYFDDRKPSENQVINAIKRGLSKGFSQFEISWGENMVTLEKGRSGVNQWIGWGWIKNISGSDL
Ga0181352_11906542	3300017747	Freshwater Lake	EQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKSISGHELAEQFNREGI
Ga0181344_10494093	3300017754	Freshwater Lake	MSIYEQYFDGRKPSENQVINAIKRGLSKGFSQFEIAWGENMITLEKGRAGVNQWHGWGWIKSISGHELAEQFNREGI
Ga0181344_11260162	3300017754	Freshwater Lake	MIYEQYFDGRKPSENQVIQAIKRGIKKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV
Ga0181344_12101493	3300017754	Freshwater Lake	MIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISG
Ga0181357_10962313	3300017777	Freshwater Lake	MSIYEQYFDGRKPSKNQVIQAIKRGLSRGHVQFEIAWGENMVSLEKGRAGVNTWLGYGWIKNISGSDLADQFNKERA
Ga0181355_10363324	3300017785	Freshwater Lake	MSIYEQYFDGRKPSKNQVIQAIKRGLSKQYNQFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV
Ga0181355_10444604	3300017785	Freshwater Lake	MIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGPNTWHGWGWIKNISGHELAEQFNREGI
Ga0181360_1214672	3300019781	Freshwater Lake	MSIYEQYFDGRKPSKNQVIQAIKRGLSRGHVQFEIAWGENMVSLEKGRAGVNTWLGYGWIKNISGSDLADQFNKEGA
Ga0181359_12407092	3300019784	Freshwater Lake	MSIYEQYFDGRKPSENQVINAIKRGLSKGFSQFELSWGENMVTLEKGRAGVNQWIGWGWIKNISGSDLADQFNREGI
Ga0207193_14425763	3300020048	Freshwater Lake Sediment	MSIYEQYFDGRKPSENQVINAIKRGLSKGFSQFEIAWGENMVTLEKGRAGVNTWHGWGWIKSIYIKLETVIS
Ga0211729_106599084	3300020172	Freshwater	VSEGQTIRTSTLYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEIAWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGI
Ga0194134_101574683	3300020179	Freshwater Lake	MIYEQYFEGRKPSKNQVIQAIKRGITQGYHVFEIAWGENMVTLDRQAGGRWAGWGWIKNISGSDLADQFNREGA
Ga0208091_10330071	3300020506	Freshwater	MSIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI
Ga0208235_10249883	3300020530	Freshwater	MNIYEQYFDGRKPSENQVIQAIKRGLSKNYNQFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI
Ga0208599_10278904	3300020554	Freshwater	MNIYEQYFDGRKPSENQVIEAIKRGLSRGHYQFEIAWGENMVTLEKGRSGVNQWIGWGWIKNISGSDLADQFNREG
Ga0194133_101585692	3300021091	Freshwater Lake	YFEGRKPSKNQVIQAIKRGITQGYHVFEIAWGENMVTLDRQAGGRWAGWGWIKNISGSDLADQFNREGA
Ga0194048_100644664	3300021519	Anoxic Zone Freshwater	MSIYEQYFDGRKPSKNQVIQAIKRGLSRGHVQFEIAWGENMVSLEKGRAGVNTWLGYGWIKNISGSDLADQFNREGI
Ga0213921_10079443	3300021952	Freshwater	MIYEHYFEGRKPSEKQVIQSIKRGLKEGHHMFEVSWGENMVTIDRQAGGRWAGWGWIKTISGHELAEQFNREGL
Ga0222713_101343654	3300021962	Estuarine Water	MSIYEQYFDGRKPSENQVINAIKRGLSKGFSQFEIAWGENMVTLEKGRVGVNTWHGWGWIKSISGHELAEQFNREGI
Ga0181353_10354472	3300022179	Freshwater Lake	MIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI
Ga0181353_10940323	3300022179	Freshwater Lake	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFN
Ga0181353_11264582	3300022179	Freshwater Lake	ENQVINAIKRGLSKGFSQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGI
Ga0214919_100471406	3300023184	Freshwater	MIYDHYFDGRKPSENQVIQAIKRGLKEGHVQFEISWGENMVTLEKGRAGPNTWHGWGWIKNISGSDLADQFNREGA
Ga0208009_10256232	3300027114	Deep Subsurface	MSIYEQYFDDRKPSENQVINAIKRGLSKGFFQFEISWGENMVTLEKGRAGVNQWHGWGWIKSISGHELAEQFNREGI
Ga0208787_11358311	3300027518	Deep Subsurface	MIYEQYFDGRKPSENQVIEAIKRGLSRGHYQFEIAWGENMVTLEKGRSGVNQWIGWGWIKNISGSDLADQFNQEGI
Ga0209704_11745462	3300027693	Freshwater Sediment	MSIYEHYFEGRKPSEKQVIQAIKQGVKQGYHMFEIAWGENMVTLDKQSSNRWAGWGWIKSISGHELAEQFNREGI
Ga0209087_10340292	3300027734	Freshwater Lake	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGVXIITP
Ga0209296_11565142	3300027759	Freshwater Lake	MYEQYFDGRKPSEKQVIQAIKRGLNQGHVQFEISWGENMVTLEKGRAGPNTWHGWGWIKSISGHELAEQFNREGV
Ga0209088_100103744	3300027763	Freshwater Lake	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGV
Ga0209088_100630994	3300027763	Freshwater Lake	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV
Ga0209134_102352041	3300027764	Freshwater Lake	MIYEQYFDGRKPSENQVINAIKRGLSKGFSQFEIAWGENMVTLEKGRAGANQWHGWGWIKNISGSDLADQFNREGI
Ga0209246_104117311	3300027785	Freshwater Lake	KMSIYEQYFDGRKPSENQVINAIKRGLSKGFSQFELSWGENMVTLEKGRAGVNQWIGWGWIKNISGSDLADQFNREGI
Ga0209358_104676172	3300027804	Freshwater Lake	FDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV
Ga0209668_108207993	3300027899	Freshwater Lake Sediment	MIYEQYFEGRKPSKNQVIQAIKRGITKGHYCFEIAWGENMVTLEKGRAGVNTWIGWGWIKDISGDNLANELNKEGA
Ga0209253_100452813	3300027900	Freshwater Lake Sediment	MSIYEQYFDGRKPSENQVINAIKRGLSKGFSQFEIAWGENMVTLEKGRAGVNQWHGWGWIKSISGHELAEQFNREGI
Ga0209820_10200962	3300027956	Freshwater Sediment	MIYEQYFDGRKPSKNQVIQAIKRGLSKQYDQFEIAWGENMVTLEKGRIAPNTWHGYGWIKNISGDDLANQFNREGI
Ga0209191_11900643	3300027969	Freshwater Lake	MSIYEQYFDGRKPSENQVIQAIKRGLSRGHVQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGV
Ga0315909_100815323	3300031857	Freshwater	MIYEQYFEGRKPSKNQVIQAIKRGITKGHYQFEIAWGENMVTLEKGRAGVNTWIGWGWIKNISGSDLADQFNREAI
Ga0315904_101671923	3300031951	Freshwater	MGGLIMIYEQYFEGRKPSKNQVIQAIKRGITKGHYQFEIAWGENMVTLEKGRAGVNTWIGWGWIKNISGSDLADQFNREAI
Ga0315294_111860071	3300031952	Sediment	MIYEHYFEGRKPSKSQVIQVIKRGLKEGHHMFEIAWGENMVTLDKQSSNRWAGWGWIKNISGSDLADQFNR
Ga0315294_114385331	3300031952	Sediment	MIYEHYFDGRKPSEKQVIEAIKRGLSQGYHVFEIAWGENMVTLDKQSSNRWAGWGWIKSISGHELAEQFNREGA
Ga0334994_0098050_1211_1483	3300033993	Freshwater	MVMVNNQEKRSYAMNIYEQYFDGRKPSENQVIQAIKRGLSKNYNQFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGL
Ga0334994_0188225_746_976	3300033993	Freshwater	MVYEQYFDDRKPSENQVINAIKRGLSKGFSQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGI
Ga0334998_0551292_253_483	3300034019	Freshwater	MIYEQYFDGRKPSKIQVIQCIKRGLSKGFSQFEIAWGENMVTLEKGRAGPNLWYGWGWIKNISGSDLADQFNKEGA
Ga0334987_0204666_272_544	3300034061	Freshwater	MVMAKNQEKRSYAMSIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI
Ga0334995_0023035_3073_3345	3300034062	Freshwater	MVMVNNQEKRSYAMNIYEQYFDGRKPSENQVIQAIKRGLSKNYNQFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI
Ga0334995_0137355_233_463	3300034062	Freshwater	MVYEQYFDDRKPSENQVINAIKRGLSKGFSQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGHELAEQFNREGV
Ga0334995_0174161_13_243	3300034062	Freshwater	MIYEQYFDGRKPSENQVIEAIKRGLSRGHYQFEIAWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGI
Ga0335028_0717244_222_488	3300034071	Freshwater	MAKNQEKRSYAMSIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI
Ga0335010_0557375_162_395	3300034092	Freshwater	MSIYEQYFDGRKPSENQVIEAIKRGLSRGHYQFEIAWGENMVTLEKGRSGVNQWIGWGWIKNISGSDLADQFNREGI
Ga0335029_0141607_812_1084	3300034102	Freshwater	MVTAKNQEKRSYAMSIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI
Ga0335031_0488897_527_751	3300034104	Freshwater	YEQYFDGRKPSENQVIEAIKRGLSRGHYQFEIAWGENMVTLEKGRSGVNQWIGWGWIKNISGSDLADQFNREGI
Ga0335066_0090203_219_491	3300034112	Freshwater	MVMAKNQEKRSYAMSIYEQYFDGRKPSENQVIQAIKRGITKGHNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGV
Ga0335060_0359239_339_572	3300034122	Freshwater	MSIYEQYFDGRKPSENQVINAIKRGLSKGFSQFEISWGENMVTLEKGRAGVNQWHGWGWIKNISGSDLADQFNREGI
Ga0335007_0092600_1155_1427	3300034283	Freshwater	MVTAKNQEKRSYAMSIYEQYFDGRKPSENQVIQAIKRGITKGYNVFEIAWGENMVTLEKGRAGVNTWHGWGWIKNISGHELAEQFNREGI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103144

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences