Metagenome Family F103058

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103058
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	92 residues
Representative Sequence	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDDTDEDGTGLRFAKVFSEKVWDRKEGGGRY
Number of Associated Samples	66
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.18 %
% of genes near scaffold ends (potentially truncated)	28.71 %
% of genes from short scaffolds (< 2000 bps)	90.10 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.376 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (55.446 % of family members)
Environment Ontology (ENVO)	Unclassified (95.050 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.050 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.46% β-sheet: 0.00% Coil/Unstructured: 47.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13328	HD_4	2.97
PF13203	DUF2201_N	1.98
PF04285	DUF444	0.99
PF06701	MIB_HERC2	0.99
PF03061	4HBT	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2718	Uncharacterized conserved protein YeaH/YhbH, required for sporulation, DUF444 family	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.26 %
Unclassified	root	N/A	25.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.38 %
Unclassified	root	N/A	25.74 %
Viruses	superkingdom	All Organisms → Viruses	11.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.38 %
Unclassified	root	N/A	25.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.44 %
Unclassified	root	N/A	25.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.97 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	56.44 %
Unclassified	root	N/A	25.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.97 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	56.44 %
Unclassified	root	N/A	25.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.88 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	2.97 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	56.44 %
Unclassified	root	N/A	25.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.88 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	2.97 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	56.44 %
Unclassified	root	N/A	25.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.88 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	2.97 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	56.44 %
Unclassified	root	N/A	25.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.88 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	2.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002514\|JGI25133J35611_10106917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	816	Open in IMG/M
3300002518\|JGI25134J35505_10059558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	929	Open in IMG/M
3300002518\|JGI25134J35505_10139299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300002519\|JGI25130J35507_1008072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2739	Open in IMG/M
3300002519\|JGI25130J35507_1044840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	897	Open in IMG/M
3300002760\|JGI25136J39404_1040802	Not Available	856	Open in IMG/M
3300002760\|JGI25136J39404_1046550	Not Available	803	Open in IMG/M
3300002760\|JGI25136J39404_1098849	Not Available	549	Open in IMG/M
3300005400\|Ga0066867_10231958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	670	Open in IMG/M
3300005428\|Ga0066863_10347876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300005508\|Ga0066868_10190620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	630	Open in IMG/M
3300005595\|Ga0066833_10231387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	508	Open in IMG/M
3300005603\|Ga0066853_10101557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	978	Open in IMG/M
3300006738\|Ga0098035_1071291	All Organisms → Viruses → Predicted Viral	1238	Open in IMG/M
3300006738\|Ga0098035_1114569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	932	Open in IMG/M
3300006750\|Ga0098058_1021673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1885	Open in IMG/M
3300006751\|Ga0098040_1104335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	852	Open in IMG/M
3300006753\|Ga0098039_1159308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	770	Open in IMG/M
3300006753\|Ga0098039_1246911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	600	Open in IMG/M
3300006753\|Ga0098039_1262942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300006793\|Ga0098055_1232178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	696	Open in IMG/M
3300006923\|Ga0098053_1126466	Not Available	512	Open in IMG/M
3300006925\|Ga0098050_1029244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1501	Open in IMG/M
3300006926\|Ga0098057_1031021	All Organisms → Viruses → Predicted Viral	1329	Open in IMG/M
3300006927\|Ga0098034_1003589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5314	Open in IMG/M
3300007504\|Ga0104999_1011704	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	6244	Open in IMG/M
3300007512\|Ga0105016_1010461	All Organisms → cellular organisms → Bacteria	10809	Open in IMG/M
3300008050\|Ga0098052_1156016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	902	Open in IMG/M
3300008216\|Ga0114898_1108569	Not Available	824	Open in IMG/M
3300008216\|Ga0114898_1169758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	620	Open in IMG/M
3300008217\|Ga0114899_1088276	All Organisms → Viruses → Predicted Viral	1056	Open in IMG/M
3300008217\|Ga0114899_1097954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	991	Open in IMG/M
3300008219\|Ga0114905_1074108	All Organisms → Viruses → Predicted Viral	1213	Open in IMG/M
3300008219\|Ga0114905_1135621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	831	Open in IMG/M
3300009108\|Ga0117920_1012063	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	5183	Open in IMG/M
3300009412\|Ga0114903_1151749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	505	Open in IMG/M
3300009413\|Ga0114902_1118130	Not Available	695	Open in IMG/M
3300009414\|Ga0114909_1142077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	637	Open in IMG/M
3300009602\|Ga0114900_1133274	Not Available	656	Open in IMG/M
3300009604\|Ga0114901_1102519	Not Available	900	Open in IMG/M
3300009605\|Ga0114906_1052009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1558	Open in IMG/M
3300009605\|Ga0114906_1097826	All Organisms → Viruses → Predicted Viral	1057	Open in IMG/M
3300009605\|Ga0114906_1242440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	590	Open in IMG/M
3300010149\|Ga0098049_1282243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	502	Open in IMG/M
3300010150\|Ga0098056_1267610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	565	Open in IMG/M
3300010151\|Ga0098061_1286641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	568	Open in IMG/M
3300011013\|Ga0114934_10205865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	910	Open in IMG/M
3300012950\|Ga0163108_10485227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	798	Open in IMG/M
3300017702\|Ga0181374_1004585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2593	Open in IMG/M
3300017704\|Ga0181371_1029085	Not Available	910	Open in IMG/M
3300017715\|Ga0181370_1041297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300017718\|Ga0181375_1010682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1608	Open in IMG/M
3300017775\|Ga0181432_1016934	All Organisms → Viruses → Predicted Viral	1846	Open in IMG/M
3300017775\|Ga0181432_1024123	All Organisms → Viruses → Predicted Viral	1593	Open in IMG/M
3300017775\|Ga0181432_1183499	Not Available	653	Open in IMG/M
3300017775\|Ga0181432_1187809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	646	Open in IMG/M
3300017775\|Ga0181432_1199801	Not Available	626	Open in IMG/M
3300017775\|Ga0181432_1242915	Not Available	567	Open in IMG/M
3300017775\|Ga0181432_1267556	Not Available	540	Open in IMG/M
3300017775\|Ga0181432_1284700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	524	Open in IMG/M
3300020449\|Ga0211642_10467208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300021791\|Ga0226832_10038026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1632	Open in IMG/M
3300021791\|Ga0226832_10300833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	654	Open in IMG/M
3300025045\|Ga0207901_1015771	Not Available	1045	Open in IMG/M
3300025066\|Ga0208012_1016172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1247	Open in IMG/M
3300025072\|Ga0208920_1060731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	741	Open in IMG/M
3300025078\|Ga0208668_1025701	All Organisms → Viruses → Predicted Viral	1168	Open in IMG/M
3300025082\|Ga0208156_1022829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1394	Open in IMG/M
3300025082\|Ga0208156_1072050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	657	Open in IMG/M
3300025108\|Ga0208793_1068467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1050	Open in IMG/M
3300025109\|Ga0208553_1003528	All Organisms → cellular organisms → Bacteria	4923	Open in IMG/M
3300025109\|Ga0208553_1095922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	691	Open in IMG/M
3300025112\|Ga0209349_1029651	All Organisms → Viruses → Predicted Viral	1841	Open in IMG/M
3300025114\|Ga0208433_1010923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2688	Open in IMG/M
3300025114\|Ga0208433_1026026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1639	Open in IMG/M
3300025114\|Ga0208433_1062990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	965	Open in IMG/M
3300025118\|Ga0208790_1039896	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1515	Open in IMG/M
3300025118\|Ga0208790_1155451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	630	Open in IMG/M
3300025122\|Ga0209434_1001436	All Organisms → cellular organisms → Bacteria	10805	Open in IMG/M
3300025122\|Ga0209434_1054401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1227	Open in IMG/M
3300025122\|Ga0209434_1198508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	521	Open in IMG/M
3300025125\|Ga0209644_1034046	Not Available	1140	Open in IMG/M
3300025125\|Ga0209644_1116221	Not Available	636	Open in IMG/M
3300025131\|Ga0209128_1049465	All Organisms → Viruses → Predicted Viral	1549	Open in IMG/M
3300025133\|Ga0208299_1126510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	830	Open in IMG/M
3300025267\|Ga0208179_1100180	Not Available	572	Open in IMG/M
3300025282\|Ga0208030_1063562	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300025286\|Ga0208315_1155273	Not Available	508	Open in IMG/M
3300025873\|Ga0209757_10109529	Not Available	850	Open in IMG/M
3300028018\|Ga0256381_1013037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1360	Open in IMG/M
3300028018\|Ga0256381_1018229	Not Available	1151	Open in IMG/M
3300028018\|Ga0256381_1024278	Not Available	987	Open in IMG/M
3300028018\|Ga0256381_1062163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	559	Open in IMG/M
3300028018\|Ga0256381_1065140	Not Available	542	Open in IMG/M
3300028022\|Ga0256382_1046279	All Organisms → Viruses → Predicted Viral	1005	Open in IMG/M
3300028022\|Ga0256382_1057886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	908	Open in IMG/M
3300028022\|Ga0256382_1078991	Not Available	783	Open in IMG/M
3300028022\|Ga0256382_1111063	Not Available	659	Open in IMG/M
3300028039\|Ga0256380_1010568	Not Available	1476	Open in IMG/M
3300032048\|Ga0315329_10018743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3154	Open in IMG/M
3300032360\|Ga0315334_11730215	Not Available	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	73.27%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.90%
Strait	Environmental → Aquatic → Marine → Strait	7.92%
Coastal	Environmental → Aquatic → Marine → Coastal	2.97%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.98%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.99%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	72.28%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.98%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.98%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	55.45%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	16.83%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	9.90%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	7.92%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.98%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.98%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	1.98%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.99%
Water Column	Environmental → Aquatic → Marine → Coastal → Unclassified → Water Column	0.99%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.99%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005428	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005595	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300007504	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007512	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009108	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017715	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300028018	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600m	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25133J35611_101069172	3300002514	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDTDEDGTGLRFAKVFSEKVWDRKEGGGRY*
JGI25134J35505_100595582	3300002518	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
JGI25134J35505_101392992	3300002518	Marine	TKMKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSIDEDGTGLRFAKVFSEKVWDRKEGGGRY*
JGI25130J35507_10080723	3300002519	Marine	MKMVIVFDTDDEQGMKNTLKIVDALARDYLGRGMDRANKREFRKIEFIKMLRTFAAEVSLATSDDSTDEDGTGLRFSKVFSEKVWDRKEGGGRW*
JGI25130J35507_10448402	3300002519	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRXFGKIEFIKXLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
JGI25136J39404_10408022	3300002760	Marine	MKMVIVFDTEDTQGMRNTLKIVDALAREYLGRGMDDSYKRNFGKIEFIKLLRTFAQDVKATAADDSTDEDGTGLRFAKVFSEKVWDRKEDGGRY*
JGI25136J39404_10465503	3300002760	Marine	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKSSLQDDSTDEDGTGLRFAKVFSEKVWDRKEGGERY*
JGI25136J39404_10988491	3300002760	Marine	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDSTDEDGAGLRFAKVFSEKVWDAKENGERY*
Ga0066867_102319582	3300005400	Marine	MKMVIVFDTDDNQGMRNTLKIIDQRARDYLGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0066863_103478762	3300005428	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLARDYFGRGMDDSYKRNFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0066868_101906201	3300005508	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDDTDEDGTGLRFAKVFSEKVWDRKELGGRY*
Ga0066833_102313872	3300005595	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDTDEDGTGLRFAKVFSEKVWDRKELGGRY*
Ga0066853_101015572	3300005603	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLARDYFGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0098035_10712911	3300006738	Marine	NTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKLLRTFAQDVKATAADDDTDEDGTGLRFAKVFSEKVWDRKELGGRY*
Ga0098035_11145692	3300006738	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRHFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFS
Ga0098058_10216733	3300006750	Marine	MKMVIVFDTEDTQGMRNTLKIVDALARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDTDEDGTGLRFAKVFSEKVWDRKELGGRY*
Ga0098040_11043354	3300006751	Marine	KMKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDTDEDGTGLRFAKVFSEKVWDRKELGGRY*
Ga0098039_11593081	3300006753	Marine	RGSTKMKMVIVFDTEDDQGMRNTLKIVDQLARDYFGRGMDDSYKRNFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0098039_12469112	3300006753	Marine	MKMVIVFDTEDTQGMRNTLKIVDALARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSIDEDGTGLRFAKVFSEKVWDRKEGGGRY*
Ga0098039_12629421	3300006753	Marine	RGSTKMKMVIVFDTEDDQGMRNTLKIVDQLARDYFGRGMDDCYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0098055_12321782	3300006793	Marine	KMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0098053_11264662	3300006923	Marine	GMKNTVKIVDQLAVDYLHMSVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDETDQDGTGLRFAKVFSEKVWDAKENGGRYP*
Ga0098050_10292443	3300006925	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRHFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0098057_10310211	3300006926	Marine	TLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKLLRTFAQDVKATAADDDTDEDGTGLRFAKVFSEKVWDRKELGGRY*
Ga0098034_10035892	3300006927	Marine	MKMVIVFDTEDTQGMRNTLKIVDALARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDDTDEDGTGLRFAKVFSEKVWDRKELGGRY*
Ga0104999_10117046	3300007504	Water Column	MKMVIVFDTEDDQGMKNTLKIVDQLARDYFGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVEDDDVTRDGSSLRFSKDFAEEVWRRKEDGNRYQ*
Ga0105016_10104612	3300007512	Marine	MKMVIVFDTDDREGMKNTIKIVDQLAIDYLGRGLRETHKRNFGKIEFIKMLRSFAAEVSLATSDDSTDEDGTGLRFAKVFSEKVWERKENDGRW*
Ga0098052_11560162	3300008050	Marine	MKMVIVFDTDDQEGMMNTVKIIDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDETDQDGTGLRFAKVFSEKVWDAKDNGGRYP*
Ga0114898_11085691	3300008216	Deep Ocean	MKMVIVFDTNDQQGMMNTVKIVDQLAIDYLGKSIDARYKRTFSKIEFIKMVREFAKEVKVAIQDEDSDEDGTGLRFAKVFSEKVWDAKDNGGRY
Ga0114898_11697581	3300008216	Deep Ocean	MKMVIVFDTEDTQGMRNTLKIVDALAREYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSTDEDGTGLRFAKVFSEKVWDAKENGGRYQ*
Ga0114899_10882762	3300008217	Deep Ocean	MKMVIVFDTNDQEGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKENGGRYP*
Ga0114899_10979542	3300008217	Deep Ocean	MKMVIVFDTEDTQGMRNTLKIVDALAREYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSTDEDGTGLRFAKVFSEKVWDRKEGGERY*
Ga0114905_10741082	3300008219	Deep Ocean	MKMVIVFDTNDPDGMMNTVKIVDQLAGDYLGKNVDARYKRTFSKIEFIKMLRSFAMDVKKEIEKGDEGADPIGLRFSKIFSEKVWDRKEDGSRY*
Ga0114905_11356212	3300008219	Deep Ocean	MKMVIVFDTDDQEGMMNTVKIVDRLAVDYLGQTVDARYKRTFSKIEFIKMVREFAKEVKVAIQDEDSDEDGTGLRFAKVFSEKVWDAKDNGGRYP*
Ga0117920_10120635	3300009108	Marine	MKMVIVFDTEDDQGMKNTLKIVDQLARDYFGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVEDDDVTRDGSSLRFSKDFAEDVWDRKEGGNRYP*
Ga0114903_11517492	3300009412	Deep Ocean	MKMVIVFDTEDQQGMRNTLKIVDALAREYLGRGMDDSYKRNFGKIEFIKMLRSFAQDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKENGGRYP*
Ga0114902_11181302	3300009413	Deep Ocean	MKMVIVFDTNDQEGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKETGGRYP*
Ga0114909_11420771	3300009414	Deep Ocean	QGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRADQDDETDQDGTGLRFAKVFSEKVWDAKENGGRYP*
Ga0114900_11332741	3300009602	Deep Ocean	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKENGGRYP*
Ga0114901_11025192	3300009604	Deep Ocean	MKMVIVFDTNDPDGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKDKGGRYP*
Ga0114906_10520093	3300009605	Deep Ocean	MKMVIVFDTDDDQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKLLRTFAQDVKATAADDDTDEDGTGLRFAKVFSEKVWDAKENGGRYP*
Ga0114906_10978263	3300009605	Deep Ocean	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAMDVKKEIEKGDEGADPIGLRFSKIFSEKVWDRKEDGSRY*
Ga0114906_12424402	3300009605	Deep Ocean	MKMVLVFDTEATQGLRNTLKIVDALAREYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSTDEDGTGLRFAKVFSEKVWDRKEGGERY*
Ga0098049_12822432	3300010149	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRNFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRH*
Ga0098056_12676101	3300010150	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0098061_12866412	3300010151	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRHFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0114934_102058653	3300011013	Deep Subsurface	MKMVIVFDTEDQQGMKNTLKIVDALARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSTDEDGTGLRFAKVFSEKVWERKENDGRW*
Ga0163108_104852272	3300012950	Seawater	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRHFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY*
Ga0181374_10045857	3300017702	Marine	MKMVIVFDTEDTQGMRNTLKIVDALARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDDTDEDGTGLRFAKVFSEKVWDRKELGGRY
Ga0181371_10290854	3300017704	Marine	STKMKMVIVFDTEDRDGMANTVKIVDQLAIDYMGRGVNIINKRTFGKIEFIKMLRTFALKVKTEVQDENADTDGTGLRFAKQFSEDVWDRKEGGNRYP
Ga0181370_10412972	3300017715	Marine	MKMVIVFDTEDTQGMRNTLKIVDALARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSIDEDGTGLRFAKVFSEKVWDRKEGGGRY
Ga0181375_10106824	3300017718	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDTDEDGTGLRFAKVFS
Ga0181432_10169342	3300017775	Seawater	MKMVIVFDTEDQQGMKNTLKIVDALARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSIDEDGTGLRFAKVFSEKVWDRKEGGGRY
Ga0181432_10241232	3300017775	Seawater	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKAAVQDDSTDENGTGLRFAKVFSEKVWDAKENGGRYP
Ga0181432_11834991	3300017775	Seawater	TSCLVTAFVRGLRRSTKMKMVIVFDTTDSQGMKNTVKIVDQLAADYLNKNVDARYKRTFSKIEFIKMLRSFAQDVKRATQDDSTDQDGTGLRFAKVFSEKVWDAKENGGRYP
Ga0181432_11878093	3300017775	Seawater	IVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDDTDEDGTGLRFAKVFSEKVWDRKELGGRY
Ga0181432_11998012	3300017775	Seawater	MKMVIVFDTEDTQGMRNTLKIVDALAREYLGRGMDDSYKRNFGKIEFIKLLRTFAQDVKATAADDSTDEDGTGLRFAKVFSEKVWDAKEIGGRYP
Ga0181432_12429152	3300017775	Seawater	MKMVIVFDTDDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAHDVKAAVQDDSADEDGTGLRF
Ga0181432_12675561	3300017775	Seawater	TVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKAAVQDDSTDEDGSGLRFAKVFSEKVWDAKETGGRYP
Ga0181432_12847001	3300017775	Seawater	MKMVIVFDTDDHDGMKNTVKIVDQLAVDYLNKTIDAKHARTFRKIEFIKMLRSFAHDVKAAVQDDSADEDGTGLRFAK
Ga0211642_104672082	3300020449	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDDTDEDGTGLRFAKVFSEKVWDRKEGGGRY
Ga0226832_100380262	3300021791	Hydrothermal Vent Fluids	MKMVIVFDTEDQQGMKNTLKIVDALARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDSTDEDGTGLRFAKVFSEKVWERKENDGRW
Ga0226832_103008332	3300021791	Hydrothermal Vent Fluids	MKMVIVFDTEDRDGMKNTVKIVDELARQYVQHGLPQVNKRNFGKIEFIKMLRAFAQEVKSESQDDTTDEDGTGLRFAKVFSEKVWDRKEGGERY
Ga0207901_10157712	3300025045	Marine	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKENGGRYP
Ga0208012_10161723	3300025066	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY
Ga0208920_10607312	3300025072	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRHFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY
Ga0208668_10257015	3300025078	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKLLRTFAQDVKATAADDDTDEDGTGLRFAKVFSEKVWDRKELGGRY
Ga0208156_10228292	3300025082	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATNDDDTDEDGTGLRFAKVFSEKVWDRKELGGRY
Ga0208156_10720502	3300025082	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLARDYFGRGMDDSYKRNFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY
Ga0208793_10684673	3300025108	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRHFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY
Ga0208553_10035289	3300025109	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRHFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSE
Ga0208553_10959221	3300025109	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDTDEDGTGLRFAKVFSEKVWDRKELGG
Ga0209349_10296511	3300025112	Marine	KMKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAQDVKATAADDDTDEDGTGLRFAKVFSEKVWDRKELGGRY
Ga0208433_10109232	3300025114	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDDTDEDGTGLRFAKVFSEKVWDRKELGGRY
Ga0208433_10260263	3300025114	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLARDYFGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY
Ga0208433_10629901	3300025114	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRHFGKIEFIKLLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGG
Ga0208790_10398963	3300025118	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLARDYFGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRF
Ga0208790_11554512	3300025118	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMDDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGR
Ga0209434_100143620	3300025122	Marine	MKMVIVFDTDDEQGMKNTLKIVDALARDYLGRGMDRANKREFRKIEFIKMLRTFAAEVSLATSDDSTDEDGTGLRFSKVFSEKVWDRKEGGGRW
Ga0209434_10544013	3300025122	Marine	MKMVIVFDTEDDQGMRNTLKIVDQLADDYLGRGMNDSYKRNFGKIEFIKMLRTFAQKVKIEVDDDDVTRDGTSLRFAKAFSEEVWVRKEGGGRY
Ga0209434_11985082	3300025122	Marine	MKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDTDEDGTGLRFAKVFSEKVWDRKEGGGRY
Ga0209644_10340464	3300025125	Marine	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKAAVQDDSTDEDGTGLRFAKVFSEKVWDAKETGGRYP
Ga0209644_11162212	3300025125	Marine	MKMVIVFDTNDQEGMMNTVKIVDHLAIDYLGKSVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDSTDEDGTGLRFAKVFSEK
Ga0209128_10494657	3300025131	Marine	KMKMVIVFDTDDNQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKMLRSFAAEVSLATSDDTDEDGTGLRFAKVFSEKVWDRKELGGRY
Ga0208299_11265102	3300025133	Marine	MKMVIVFDTDDQEGMMNTVKIIDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRSVQDDETDQDGTGLRFAKVFSEKVWDAKENGGRYP
Ga0208179_11001801	3300025267	Deep Ocean	MKMVIVFDTNDQQGMMNTVKIVDQLAIDYLGKSIDARYKRTFSKIEFIKMLRSFAAEVSLATSDDSTDEDGTGLRFAKVFSEKVWDRKEDGSRY
Ga0208030_10635623	3300025282	Deep Ocean	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAMDVKKEIEKGDEGADPIGLRFSKIFSEKVWDRKEDGSRY
Ga0208315_11552732	3300025286	Deep Ocean	MKMVIVFDTNDQEGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKENGGRYP
Ga0209757_101095292	3300025873	Marine	MKMVIVFDTEDTQGMRNTLKIVDALAREYLGRGMDDSYKRNFGKIEFIKLLRTFAQDVKATAADDSTDEDGTGLRFAKVFSEKVWDRKEDGGRY
Ga0256381_10130372	3300028018	Seawater	MKMVIVFDTNDPDGMMNTVKIVDQLAGDYLGKNVDARYKRTFSKIEFIKMLREFARDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKETGGRYP
Ga0256381_10182293	3300028018	Seawater	MKMVIVFDTNDPDGMKNTVKIVDQLALDYLGKTVDARYKRTFSKIEFIKMLRTFATNVKNEIEKGDEGADPIGLRFSKIFSEEVWDRKARGERY
Ga0256381_10242782	3300028018	Seawater	MKMVIVFDTDDHDGMMNTVKIVDQLAVDYLGKSIDARYKRTFSKIEFIKMLRSFAQDVKVAIQDDDTDEDGTGLRFAKVFSEKVWD
Ga0256381_10621631	3300028018	Seawater	MKMVIVFDTDDDQGMRNTLKIIDQLARDYLGRGMDDSYKRNFGKIEFIKLLRTFAQDVKATAADDDTDEDGTGLRFAKVFSEKVWDAKENGGRYP
Ga0256381_10651401	3300028018	Seawater	MKMVIVFDTNDQEGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMVREFAKEVKVAIQDEDSDEDGTGLRFAKVFSEE
Ga0256382_10462792	3300028022	Seawater	MKMVIVFDTDDRQGMTNTVHIVDKLAAEYLNKNVDERYKRTFSKIEFIKMLRSFAINVKNEIEKGDEGADPIGLRFSKIFSEEVWDRKEGGERY
Ga0256382_10578864	3300028022	Seawater	MKMVIVFDTNDPDGMMNTVKIVDQLAGDYLGKNVDARYKRTFSKIEFIKMLREFARDVKRAVQDDDTDEDGTGLRFAKVFSEKVWDAKDSGGRYP
Ga0256382_10789912	3300028022	Seawater	MKMVIVFDTDDHDGMMNTVKIVDQLAVDYLGKSIDARYKRTFSKIEFIKMLRSFAQDVKVAIQDDDTDEDGTGLRFAKVFSEKVWDAKENGGRYP
Ga0256382_11110631	3300028022	Seawater	RNTLKIVDALAREYLGRGMDDSYKRNFGKIEFIKMLRTFATKVKAEVEKEDPATDGTGLRFAKQFSEDVWDRKERGERY
Ga0256380_10105681	3300028039	Seawater	MKMVIVFDTNDQEGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMVREFAKEVKVAIQDEDSDEDGTGLRFAKVFSE
Ga0315329_100187434	3300032048	Seawater	MKMVIVFDTDDQEGMMNTVKIVDHLAIDYLGKSVDARYKRTFSKIEFIKMLRSFAQDVKRAVQDDETDQDGTGLRFAKVFSEKVWDAKDNGGRYP
Ga0315334_117302152	3300032360	Seawater	MKMVIVFDTNDQQGMMNTVKIVDQLAVDYLGKNVDARYKRTFSKIEFIKMLRSFAHDVKAAVQDDSADEDGTGLRFAKVFSEEVWDRKKDGDRY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103058

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences