Metagenome / Metatranscriptome Family F103005

Basic Information
Family ID	F103005
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	79 residues
Representative Sequence	MARPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLL
Number of Associated Samples	72
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (45.545 % of family members)
Environment Ontology (ENVO)	Unclassified (65.347 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.307 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.51% β-sheet: 10.13% Coil/Unstructured: 49.37%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03465	eRF1_3	56.44
PF00696	AA_kinase	1.98
PF08713	DNA_alkylation	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4912	3-methyladenine DNA glycosylase AlkD	Replication, recombination and repair [L]	0.99

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Loam	Environmental → Terrestrial → Soil → Loam	0.99%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	63.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	45.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_101713901	3300002908	Grasslands Soil	MARPVKVIFFDLGETLVTQNIEDNMVTKNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEI
JGI25390J43892_100233991	3300002911	Grasslands Soil	MSRSAKVVFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGDNPSDQLVNRAIEIIVKAR
JGI25390J43892_101418671	3300002911	Grasslands Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIR
JGI25389J43894_10003898	3300002916	Grasslands Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDTRQTNLSREPLKSS*
JGI25389J43894_10923972	3300002916	Grasslands Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPGRLFELYREGYKINET
Ga0066674_100916902	3300005166	Soil	MSRSAKVVFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPEKMFELYHEGYKINETIRSRHHVEI
Ga0066672_107226622	3300005167	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPEILFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIED
Ga0066672_108525392	3300005167	Soil	MARPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEI
Ga0066688_104897411	3300005178	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTSNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVE
Ga0066685_101818452	3300005180	Soil	MSRSAKVVFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLE
Ga0066685_105345751	3300005180	Soil	MSRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINETIR
Ga0066678_104086752	3300005181	Soil	MPRPAKVLFFDLGETLVTQNIEDNMVTKNALREISPILPKRVSAERMFDLYREGYKINETLRSRHHVEIPIQVWMR
Ga0066678_110359311	3300005181	Soil	MARPAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSLERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQ
Ga0066678_111134811	3300005181	Soil	MARPAKIIFFDLGETLVTQNIEDNMVTRNALREISPTLPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERII
Ga0066676_106169561	3300005186	Soil	MSRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINETIRSRHHVEI
Ga0066682_104805111	3300005450	Soil	MARPAKVIFFDLGETLVTQNIEDNMVTKNALREISPILPRRVSSERLFEFYREGYKINETIRSRHHVEIPIQVWMRQ
Ga0066697_101348452	3300005540	Soil	MSRSAKVVFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGD
Ga0066661_104714332	3300005554	Soil	MARLAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVE
Ga0066707_101446783	3300005556	Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISAMLPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQ
Ga0066704_100011756	3300005557	Soil	MRPERGRPMSRPAKVIFFDLGETLVTQNIEDNMVTRNALPEISPILPKRVSPERMFELYHEGYKINETIRSRHHVEIPIQVW
Ga0066698_101194522	3300005558	Soil	MSRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGD
Ga0066700_102056232	3300005559	Soil	MPQQTKVIFFDLGETLVTQNIEDNMVTKNALREIDAILPKRVSPERFFELYREGYKINETIRSRHQVEIPIQVWMRQ
Ga0066699_105177842	3300005561	Soil	MARPAKAIFLDLGETLVTQNIEDNMVTRNALREIRPILPKRVSPERLFKLYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPS
Ga0066703_102871521	3300005568	Soil	MARLAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMR
Ga0066703_108278242	3300005568	Soil	MPQPAKVLFFDLGETLVTQNIEDNMVTKNALREISPILPKRVSAERMFDLYREGYKINETLRSRHHVEIPIQVWMRQLLE
Ga0066694_102064661	3300005574	Soil	MSRSAKVVFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQ
Ga0066706_103896162	3300005598	Soil	MARPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLL
Ga0066656_107708381	3300006034	Soil	MRPERGRPMSRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGD
Ga0066656_108817522	3300006034	Soil	MVRQTKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPEKLFELYREGYKINEAIRSRHHVEIPI
Ga0066653_100790503	3300006791	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPEGLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVTRAIE
Ga0066658_100538541	3300006794	Soil	MVAGAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVT
Ga0066658_103719311	3300006794	Soil	MARPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNP
Ga0066658_107407311	3300006794	Soil	MARPAKAIFFDLGETLVTQNIEDTMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVT
Ga0066659_101129082	3300006797	Soil	MARPAKIIFFDLGETLVTQNIEDNMVTRNALREISPTLPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIE
Ga0066659_115247181	3300006797	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTKNALREISPILPRRVSPERLFGFYREGYKINETIRSRHHVEIPIQVWMRQLLERIIE
Ga0099791_106382551	3300007255	Vadose Zone Soil	MALQTKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPEKLFELYREGYKINEAIRSRHHVEIPIQVWMRQLLERIIEDNPS
Ga0066710_1001902823	3300009012	Grasslands Soil	MSRPARIVFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPERMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGDNPSDQLVNRAIEIIVKA
Ga0066710_1007298852	3300009012	Grasslands Soil	MSRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINETIRS
Ga0066710_1018808891	3300009012	Grasslands Soil	MARPAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSLERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQL
Ga0066710_1031262431	3300009012	Grasslands Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPGRLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIED
Ga0066710_1037035471	3300009012	Grasslands Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRKALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIP
Ga0099829_109537691	3300009038	Vadose Zone Soil	MVRQTRVIFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPERLFEFYREVYQINEA
Ga0099830_116833751	3300009088	Vadose Zone Soil	MVRQTKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPEKLFELYREGYKINEAIRSRHHVE
Ga0066709_1011155682	3300009137	Grasslands Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISAMLPKRVSPERLFELYREGYKIN
Ga0066709_1034112531	3300009137	Grasslands Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPGRLFELYREGYKINETIRSRH
Ga0127449_11274741	3300010117	Grasslands Soil	MAKRTKAIFFDLGETLVTQNIEDSMVTRNALQEISKILPKLVSPETLFRLYMKGYKTNDAIRSEYNVEIPIQTWMRQLLKRVTEKEPTDRLVEESIDII
Ga0126378_110484071	3300010361	Tropical Forest Soil	MQHRAKAIFFDLGETLVTQNIEDNMVTRNALEDISMILPRRLSVDNMFRLYQKGYSINNAIRSEHNVEIPILIWMRYLLKRLLGTEPKSQLVS
Ga0150983_132378462	3300011120	Forest Soil	MVRQTKVIFFDLGETLVTQNIEDNMVTKNALHEISPLLPKRISPEKLFEFYREGYKINETIRSRHQVEIPIQ
Ga0137391_102664112	3300011270	Vadose Zone Soil	VAQPTKVIFFDLGETLVTQNIEDNMVTKNALREIGPILPKRISAERFFELYREGYKINETIRSRHHVEIPIQVWMRQLLERAIDDSPSDGLVSEAI
Ga0137393_112345821	3300011271	Vadose Zone Soil	MVRQTKVIFFDLGETLVTQNIEDTMVTRNALREISPILPKQISPEKLFELYREGYKINEAIR
Ga0137393_116334321	3300011271	Vadose Zone Soil	MPQPTKVIFFDLGETLVTQNIEDNMVTKNALREIGPTLPKRISPKKFFELYREGYKINETIRSRHHVEIPIQVWMRQL*
Ga0137388_108810262	3300012189	Vadose Zone Soil	MVRQTKVIFFDLGETLVTQNIEDTMVTRNALREISPILPKQVSPEKLFELYREGYKINEAIRSRHHVEIPIQVW
Ga0137364_101054922	3300012198	Vadose Zone Soil	MSRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGDNPSDQLVNRA
Ga0137364_101886312	3300012198	Vadose Zone Soil	MARPAKVIFFDLGETLVTQNIEDNMVTKNALREISPILPRRVSSERLFEFYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVNRAIEIIVK
Ga0137364_102056312	3300012198	Vadose Zone Soil	MSRSAKVVFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLER
Ga0137364_102796032	3300012198	Vadose Zone Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVNRAIEIIVK
Ga0137364_111634821	3300012198	Vadose Zone Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLER
Ga0137383_105102292	3300012199	Vadose Zone Soil	MVAGAEAIFFDLGETLVTQNIEDNMVTRNALGEISLILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWM
Ga0137383_113045061	3300012199	Vadose Zone Soil	MSRPAKVIFFDLGETLATQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKI
Ga0137363_102217322	3300012202	Vadose Zone Soil	MVRQTKVIFFDLGETLVTQNIEDNMVTRNALREIGPILPKRVSPEKLFELYREGYKINEAIRSRHHVEIPIQVWMRQLLERIIEDNPSD
Ga0137380_104672041	3300012206	Vadose Zone Soil	MSRPTKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPERMFELYHEGYKINETIRSRHHVEIPIQVWTRQLLER
Ga0137381_100209217	3300012207	Vadose Zone Soil	MVAGAEAIFFDLGETLVTQNIEDNMVTRNALGEISLILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVW
Ga0137381_104801482	3300012207	Vadose Zone Soil	MVAEAKAIFFDLGETLVTQNIEDNMITRNALGEISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPI
Ga0137376_103129121	3300012208	Vadose Zone Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGDN
Ga0137379_100350536	3300012209	Vadose Zone Soil	MSRPTKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPERMFELYHEGYKINETIRSRHHVEIPIQVWTRQLLERIIGDNPSDQLVN
Ga0137379_115246032	3300012209	Vadose Zone Soil	MPRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINETIRSRHH
Ga0137378_117653091	3300012210	Vadose Zone Soil	MSRPAKVIFFDLGETLATQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINE
Ga0137386_100666741	3300012351	Vadose Zone Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALRETSPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVTRAIEII
Ga0137371_110860831	3300012356	Vadose Zone Soil	MSRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPERMFELYHEGYKINETIRSRHHVEIPIQVWLRQLLERIIADNP*
Ga0137384_111069211	3300012357	Vadose Zone Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSSERMFELYHEGYKINETIRSRHHVEIPI
Ga0137385_102836192	3300012359	Vadose Zone Soil	MVAEAEAIFFDLGETLVTQNIEDNMVTRNALGEISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMR
Ga0137361_116308071	3300012362	Vadose Zone Soil	MVRQRKVIFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPEKLFELYREGYKINEAIRSRHH
Ga0137396_104826332	3300012918	Vadose Zone Soil	MVRQTKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPEKLFELYREGYKINEAIRSRHH
Ga0137416_104697832	3300012927	Vadose Zone Soil	MKVIFFDLGETLVTQNIEENMVTRNALREISPTLPKRVSPEKLFELYREGYKINEAIRSRHHVEIPIQVWMRQLLERVIEDTPS
Ga0137416_106151151	3300012927	Vadose Zone Soil	MASKAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPEKLFELYRDGYKINEAIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVS
Ga0137420_12814831	3300015054	Vadose Zone Soil	MKVIFFDLGETLVTQNIEENMVTRNALREISPTLPKRVSPEKLFELYREGYKINEAIRSRHLDITW
Ga0134069_10282342	3300017654	Grasslands Soil	LPKMAKRTKAIFFDLGETLVTQNIEDSMVTRNALQEISKILPKLVSPETLFRLYMKGYKTNDAIRSEYNVEIPIQT
Ga0187771_103402702	3300018088	Tropical Peatland	LVGHAKAIFFDLGETLVTQNIEDSMITRNALSEISKILPKHVPPDSLFRLYMKGYKINDAIRNEYNVEIPIDAWMRQLLRRAVGSE
Ga0066667_116379431	3300018433	Grasslands Soil	MARPAKAIFFDLGETLVTQNIEDNMVTSNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEI
Ga0066662_124272861	3300018468	Grasslands Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALPEISPILPKRVSPERMFELYHEGYKINETIRSRHHVEIPIQVW
Ga0215015_102953421	3300021046	Soil	MVQRTKVIFFDLGETLVTQNIEDNMVTKNALREISPILPNRVSPEKLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEGNPSDQLVSKAIKII
Ga0209235_10040766	3300026296	Grasslands Soil	MLRPAKVLFFDLGETLVTQNIEDNMVTKNALREISPILPKRVSPERMFDLYREGYKINETLRSRHHVEIPIQ
Ga0209469_11305021	3300026307	Soil	MSRPAKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERMFELYHEGYKINETIRSR
Ga0209055_11088012	3300026309	Soil	MARLAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPS
Ga0209055_11088022	3300026309	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPEILFELYREGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPS
Ga0209239_11258191	3300026310	Grasslands Soil	MNNATQRGRPMSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISPILPKQVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLER
Ga0209239_11680362	3300026310	Grasslands Soil	MVRQTKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPEKLFELYREGYKINEAIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVRKAIKIIVK
Ga0209472_10781582	3300026323	Soil	LPKMAKRTKAIFFDLGETLVTQNIEDSMVTRNALQEISKILPKLVSPETLFRLYMKGYKTNDAIRSEYNVEIPIQ
Ga0209470_12749732	3300026324	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREIRPILPKRVSPERLFKLYRDGYKINETIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVTRAIEII
Ga0209801_10535402	3300026326	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPERLFELYREGYKINETIRSRHQVEIPIQVWMRQLLERII
Ga0209803_12583181	3300026332	Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALPEISPILPKRVSPERMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGDNPSDQLVNRAIEVIVKAR
Ga0209803_12822201	3300026332	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPGRLFELYREGYK
Ga0209057_10741542	3300026342	Soil	MSRSAKVVFFDLGETLVTQNIEDNMVTRNALREISPMLPKRVSPEKMFELYHEGYKINETIRSRHHVEIPIQVWMRQLLERIIGDNPS
Ga0209806_11844412	3300026529	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTSNALREISPILPKRVSPERLFELYREGYKINET
Ga0209160_11725791	3300026532	Soil	MNPPPGRPMSRPAKVVFFDLGETLVTQNIEDNMVTKNALREIDAILPKRISPERFFELYREGYKINETI
Ga0209056_101496761	3300026538	Soil	LEPATNLIRMNPPPGRPMSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISAMRPKRVSPERLFELYREAYKINETIRSRHHVEIPIQ
Ga0209805_11945312	3300026542	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTKNALREISPILPRRVSPERLFEFYREGYTINETIRSRHHVEIPIQVWMRQLLERIIEGNPS
Ga0209161_103574531	3300026548	Soil	MARPAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSLERLFELYREGYKINETIRSR
Ga0209648_107121811	3300026551	Grasslands Soil	MVRQTKVIFFDLGETLVTQNIEDNMVTRNALREISPILPKQISPEKLFELYREGYKINEAIRSRHHVEIPIQVWMRQLLERIIEDNPSDQLVRKAIKIIVK
Ga0209689_10867512	3300027748	Soil	MSRPAKVVFFDLGETLVTQNIEDNMVTRNALREISAMLPKRVSPERLFELYREGYKINETIRSRHHVEIP
Ga0209689_11871432	3300027748	Soil	MARPAKAIFFDLGETLVTQNIEDNMVTRNALREISPILPKRVSPERLFELYREGYKINET

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103005

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences